BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00020139
         (839 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006347950.1| PREDICTED: pentatricopeptide repeat-containi...   365   1e-98
ref|XP_004231149.1| PREDICTED: pentatricopeptide repeat-containi...   360   5e-97
emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]   332   8e-89
gb|EPS70650.1| hypothetical protein M569_04107 [Genlisea aurea]       328   1e-87
ref|XP_002326871.1| predicted protein [Populus trichocarpa]           318   2e-84
gb|EOX96449.1| Pentatricopeptide repeat superfamily protein isof...   316   7e-84
gb|EXB37620.1| hypothetical protein L484_021826 [Morus notabilis]     313   6e-83
ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containi...   301   2e-79
ref|XP_002511599.1| pentatricopeptide repeat-containing protein,...   287   4e-75
ref|XP_004308509.1| PREDICTED: pentatricopeptide repeat-containi...   285   2e-74
gb|EMJ05647.1| hypothetical protein PRUPE_ppa026467mg [Prunus pe...   285   2e-74
ref|XP_003551717.1| PREDICTED: pentatricopeptide repeat-containi...   281   2e-73
gb|ESW11626.1| hypothetical protein PHAVU_008G046100g [Phaseolus...   280   3e-73
ref|XP_006293876.1| hypothetical protein CARUB_v10022861mg [Caps...   278   2e-72
ref|XP_004489099.1| PREDICTED: pentatricopeptide repeat-containi...   266   9e-69
ref|XP_002880144.1| pentatricopeptide repeat-containing protein ...   265   1e-68
gb|ABE65907.1| pentatricopeptide repeat-containing protein [Arab...   265   2e-68
ref|NP_182015.1| Pentatricopeptide repeat-containing protein [Ar...   265   2e-68
ref|XP_006397667.1| hypothetical protein EUTSA_v10001725mg [Eutr...   264   3e-68
ref|XP_003620999.1| Pentatricopeptide repeat-containing protein ...   258   2e-66

>ref|XP_006347950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g44880-like [Solanum tuberosum]
          Length = 603

 Score =  365 bits (936), Expect = 1e-98
 Identities = 174/279 (62%), Positives = 218/279 (78%)
 Frame = +3

Query: 3   KKCLFLLQQRNTRATLFQIHAFMIRNALETNINLLTKLIWTFATGDPLAGISYARRLFDL 182
           ++C  LLQ+RN++ATL +IHA M+RNA+E N++LLT LI +F+  DP+AGIS+ARR+FD 
Sbjct: 15  RECHVLLQRRNSKATLLRIHAIMLRNAIENNVSLLTMLISSFSVNDPVAGISHARRMFDK 74

Query: 183 SPRKCDTFLCNTMIKSHLHARQFTQATTLYKFLLKNVEFNPDNYTFSSLAKCCALDLEFW 362
           S +K  TFLCN MIKSH+   QF  +T LY+ LL++  F PDNYT SSL+KCC   L  W
Sbjct: 75  SLQKDKTFLCNAMIKSHMGVGQFADSTFLYRDLLRHTSFKPDNYTLSSLSKCCGARLVLW 134

Query: 363 GGLGVHNHALKSGFVSNLYVATALVDMYGKLGEMSSAKKAFDEMTERTSVSWTALVDGYV 542
            GL +HNH LK GF SNL+VAT+LVDMYGK GEM  A+K FDEM +R+ VSWTAL+ GY+
Sbjct: 135 EGLEIHNHVLKCGFASNLFVATSLVDMYGKFGEMDFARKLFDEMPQRSPVSWTALIGGYL 194

Query: 543 KIGDIDVAKRLFDLMPEKDTAAYNVMINAYVKLGQIGLARSLFEAMPERNVVSYTCMIDG 722
           K   + +A+ LFD MPEKD AA+NVMI+AYVK G +  A  LF AMPERNV+S+T MIDG
Sbjct: 195 KCRCMGIAEGLFDAMPEKDVAAFNVMIDAYVKKGDMLSANRLFWAMPERNVISWTSMIDG 254

Query: 723 YCCNCDLGEARLLFDTMPERNLFSWNAMIGGYCQNKQPQ 839
           +C N ++ EAR+LFD MP+RNL+SWNAMIGGYCQNKQPQ
Sbjct: 255 HCSNGNVSEARVLFDVMPQRNLYSWNAMIGGYCQNKQPQ 293



 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 67/220 (30%), Positives = 97/220 (44%), Gaps = 12/220 (5%)
 Frame = +3

Query: 153 ISYARRLFDLSPRKCDTFLCNTMIKSHLHARQFTQATTLYKFLLKNVEFNPDNYTFSS-- 326
           +S AR LFD+ P++ + +  N MI  +   +Q  +A  L+  L       PD  T  S  
Sbjct: 261 VSEARVLFDVMPQR-NLYSWNAMIGGYCQNKQPQEALKLFHELQMGTTLEPDGVTVVSVL 319

Query: 327 --LAKCCALDLEFWGGLGVHNHALKSGFVSNLYVATALVDMYGKLGEMSSAKKAFDEMTE 500
             +A   ALDL  W    +H +  +     +  V TALVDMY K GE++ A++ FDE+  
Sbjct: 320 PAIADLGALDLGNW----IHQYVKRRKLDRSSNVCTALVDMYAKCGEIAKAREFFDEIKV 375

Query: 501 RTSVSWTALVDGYVKIGDIDVAKRLFDLMPEKDTAAYNV-MINAYVKLGQIGLARSLFEA 677
           + S SW AL++G    G    A  +F+ M  K      + M+         GL     + 
Sbjct: 376 KESSSWNALINGLAINGSAKEALEVFEKMKSKGYEPNEITMLGVLSACNHGGLVEEGKKW 435

Query: 678 MPERNVVSYTCMIDGYCCNCD-------LGEARLLFDTMP 776
             E      T  I+ Y C  D       L EA  L +TMP
Sbjct: 436 FVEMEKYGLTPQIEHYGCLVDLLGRSGCLEEAENLIETMP 475



 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 46/172 (26%), Positives = 76/172 (44%), Gaps = 40/172 (23%)
 Frame = +3

Query: 432 LVDMYGKLGEMSSAKKAFDEMTERTSVSWTALVDGYVKIGDIDVAKRLFDLMPEKDTAAY 611
           ++D Y K G+M SA + F  M ER  +SWT+++DG+   G++  A+ LFD+MP+++  ++
Sbjct: 220 MIDAYVKKGDMLSANRLFWAMPERNVISWTSMIDGHCSNGNVSEARVLFDVMPQRNLYSW 279

Query: 612 NVMINAYVKLGQIGLARSLFEAMP------------------------------------ 683
           N MI  Y +  Q   A  LF  +                                     
Sbjct: 280 NAMIGGYCQNKQPQEALKLFHELQMGTTLEPDGVTVVSVLPAIADLGALDLGNWIHQYVK 339

Query: 684 ----ERNVVSYTCMIDGYCCNCDLGEARLLFDTMPERNLFSWNAMIGGYCQN 827
               +R+    T ++D Y    ++ +AR  FD +  +   SWNA+I G   N
Sbjct: 340 RRKLDRSSNVCTALVDMYAKCGEIAKAREFFDEIKVKESSSWNALINGLAIN 391


>ref|XP_004231149.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g44880-like [Solanum lycopersicum]
          Length = 605

 Score =  360 bits (923), Expect = 5e-97
 Identities = 174/279 (62%), Positives = 216/279 (77%)
 Frame = +3

Query: 3   KKCLFLLQQRNTRATLFQIHAFMIRNALETNINLLTKLIWTFATGDPLAGISYARRLFDL 182
           ++C  LLQQRN++ATL +IHA M+RNA+E N++LLT LI +F+  DP+AGIS+ARR+FD 
Sbjct: 17  RECHVLLQQRNSKATLLRIHAIMLRNAIEDNVSLLTMLISSFSVSDPVAGISHARRMFDK 76

Query: 183 SPRKCDTFLCNTMIKSHLHARQFTQATTLYKFLLKNVEFNPDNYTFSSLAKCCALDLEFW 362
           S +K  TFLCN MIKSH+   QF  +T LY+ LL++  F PDNYT SSL+KCC   L   
Sbjct: 77  SLQKDKTFLCNAMIKSHMGVGQFADSTFLYRDLLRHTSFKPDNYTLSSLSKCCGARLVLL 136

Query: 363 GGLGVHNHALKSGFVSNLYVATALVDMYGKLGEMSSAKKAFDEMTERTSVSWTALVDGYV 542
            GL +HNH LK GF SNL+VAT+LVDMYGK GEM+ A+K FDEM +R+ VSWTAL+ GY+
Sbjct: 137 EGLEIHNHVLKCGFASNLFVATSLVDMYGKFGEMAFARKLFDEMPQRSPVSWTALIGGYL 196

Query: 543 KIGDIDVAKRLFDLMPEKDTAAYNVMINAYVKLGQIGLARSLFEAMPERNVVSYTCMIDG 722
           K     +A+ LFD MPEKD AA+NVMI+AYVK G +  A  LF AMPERNV+S+T MIDG
Sbjct: 197 KCRCTGIAEGLFDAMPEKDVAAFNVMIDAYVKKGDMLSANRLFWAMPERNVISWTSMIDG 256

Query: 723 YCCNCDLGEARLLFDTMPERNLFSWNAMIGGYCQNKQPQ 839
           +C N ++ EA+ LFD MP+RNLFSWNAMIGGYCQNKQPQ
Sbjct: 257 HCSNGNVSEAKALFDVMPQRNLFSWNAMIGGYCQNKQPQ 295



 Score = 81.6 bits (200), Expect = 3e-13
 Identities = 66/220 (30%), Positives = 97/220 (44%), Gaps = 12/220 (5%)
 Frame = +3

Query: 153 ISYARRLFDLSPRKCDTFLCNTMIKSHLHARQFTQATTLYKFLLKNVEFNPDNYTFSS-- 326
           +S A+ LFD+ P++ + F  N MI  +   +Q  +A  L+  L       PD  T  S  
Sbjct: 263 VSEAKALFDVMPQR-NLFSWNAMIGGYCQNKQPQEALKLFHELQMGTTLEPDGVTVVSVL 321

Query: 327 --LAKCCALDLEFWGGLGVHNHALKSGFVSNLYVATALVDMYGKLGEMSSAKKAFDEMTE 500
             +A   ALDL  W    VH +  +     +  V TAL+DMY K GE++ A++ F+E+  
Sbjct: 322 PAIADLGALDLGNW----VHQYVKRKKLDRSSNVCTALIDMYAKCGEIAKAREFFNEIKV 377

Query: 501 RTSVSWTALVDGYVKIGDIDVAKRLFDLMPEKDTAAYNV-MINAYVKLGQIGLARSLFEA 677
           + S SW AL++G    G    A  +F+ M  K      + M+         GL     + 
Sbjct: 378 KESSSWNALINGLAINGSAKEALEVFEKMKSKGYEPNEITMLGVLSACNHGGLVEEGKKW 437

Query: 678 MPERNVVSYTCMIDGYCCNCD-------LGEARLLFDTMP 776
             E      T  I+ Y C  D       L EA  L +TMP
Sbjct: 438 FVEMEKYGLTPQIEHYGCLVDLLGRSGCLDEAENLIETMP 477



 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 40/172 (23%)
 Frame = +3

Query: 432 LVDMYGKLGEMSSAKKAFDEMTERTSVSWTALVDGYVKIGDIDVAKRLFDLMPEKDTAAY 611
           ++D Y K G+M SA + F  M ER  +SWT+++DG+   G++  AK LFD+MP+++  ++
Sbjct: 222 MIDAYVKKGDMLSANRLFWAMPERNVISWTSMIDGHCSNGNVSEAKALFDVMPQRNLFSW 281

Query: 612 NVMINAYVKLGQIGLARSLFEAMP------------------------------------ 683
           N MI  Y +  Q   A  LF  +                                     
Sbjct: 282 NAMIGGYCQNKQPQEALKLFHELQMGTTLEPDGVTVVSVLPAIADLGALDLGNWVHQYVK 341

Query: 684 ----ERNVVSYTCMIDGYCCNCDLGEARLLFDTMPERNLFSWNAMIGGYCQN 827
               +R+    T +ID Y    ++ +AR  F+ +  +   SWNA+I G   N
Sbjct: 342 RKKLDRSSNVCTALIDMYAKCGEIAKAREFFNEIKVKESSSWNALINGLAIN 393


>emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]
          Length = 751

 Score =  332 bits (852), Expect = 8e-89
 Identities = 167/285 (58%), Positives = 209/285 (73%), Gaps = 7/285 (2%)
 Frame = +3

Query: 3    KKCLFLLQQRNTRATLFQIHAFMIRNALETNINLLTKLIWTFAT-------GDPLAGISY 161
            +KCL LLQQ  TRA L QIHAFM+RNALETN NL TK I T ++        DPLAGI +
Sbjct: 153  RKCLSLLQQSKTRANLLQIHAFMLRNALETNPNLFTKFIATCSSIALLAPLYDPLAGIVH 212

Query: 162  ARRLFDLSPRKCDTFLCNTMIKSHLHARQFTQATTLYKFLLKNVEFNPDNYTFSSLAKCC 341
            ARR+FD  P + D FLCN+MIK+++  RQ++++  LY+ L +N  F PD++TFS LAK C
Sbjct: 213  ARRMFDHRPHRDDAFLCNSMIKAYVGMRQYSESFALYRDLRRNTSFTPDSFTFSVLAKSC 272

Query: 342  ALDLEFWGGLGVHNHALKSGFVSNLYVATALVDMYGKLGEMSSAKKAFDEMTERTSVSWT 521
            AL++  W G  +H+H +  GF  +LY ATALVDMY K G+M  A+K FDEM +R+ VSWT
Sbjct: 273  ALNMAIWEGQEIHSHVVAVGFCLDLYAATALVDMYAKFGKMDCARKLFDEMIDRSQVSWT 332

Query: 522  ALVDGYVKIGDIDVAKRLFDLMPEKDTAAYNVMINAYVKLGQIGLARSLFEAMPERNVVS 701
            AL+ GYV+ GD+D A +LFD M EKD+AA+N MI+AYVKLG +  AR LF+ MPER+VVS
Sbjct: 333  ALIGGYVRSGDMDNAGKLFDQMIEKDSAAFNTMIDAYVKLGDMCSARKLFDEMPERSVVS 392

Query: 702  YTCMIDGYCCNCDLGEARLLFDTMPERNLFSWNAMIGGYCQNKQP 836
            +T MI GY  N +L  AR LFD MPE+NLFSWNAMI GY QNKQP
Sbjct: 393  WTIMIYGYSSNGNLDSARSLFDAMPEKNLFSWNAMISGYXQNKQP 437



 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 66/217 (30%), Positives = 94/217 (43%), Gaps = 12/217 (5%)
 Frame = +3

Query: 162  ARRLFDLSPRKCDTFLCNTMIKSHLHARQFTQATTLYKFLLKNVEFNPDNYTFSS----L 329
            AR LFD  P K + F  N MI  +   +Q  +A  L+  +       PD  T  S    +
Sbjct: 409  ARSLFDAMPEK-NLFSWNAMISGYXQNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAI 467

Query: 330  AKCCALDLEFWGGLGVHNHALKSGFVSNLYVATALVDMYGKLGEMSSAKKAFDEMTERTS 509
            A   ALDL  W    VH    +        V TAL+DMY K GE+  ++  FD M E+ +
Sbjct: 468  ADLGALDLGGW----VHRFVRRKKLDRATNVGTALIDMYAKCGEIVKSRGVFDNMPEKET 523

Query: 510  VSWTALVDGYVKIGDIDVAKRLFDLMPEKDTAAYNV----MINAYVKLGQIGLARSLFEA 677
             SW AL++ +   G    A  LF  M  K      +    +++A    G +   +  F+A
Sbjct: 524  ASWNALINAFAINGRAKEALGLFMEMNHKGFMPNEITMIGVLSACNHSGLVEEGKRWFKA 583

Query: 678  MPE----RNVVSYTCMIDGYCCNCDLGEARLLFDTMP 776
            M E      +  Y CM+D       L EA  L ++MP
Sbjct: 584  MEEFGLTPKIEHYGCMVDLLGRAGCLQEAEKLMESMP 620


>gb|EPS70650.1| hypothetical protein M569_04107 [Genlisea aurea]
          Length = 564

 Score =  328 bits (842), Expect = 1e-87
 Identities = 166/281 (59%), Positives = 210/281 (74%), Gaps = 3/281 (1%)
 Frame = +3

Query: 3   KKCLFLLQQR-NTRATLFQIHAFMIRNALETNINLLTKLIWTFATGDPLAGISYARRLFD 179
           +KCL LLQ    + ATL QIH FMI  AL+ N+NL+T+LI T +  D + G  +ARR+FD
Sbjct: 11  RKCLSLLQSTFRSSATLLQIHGFMIVGALDANVNLVTQLIGTLSCTDTVWGTRHARRVFD 70

Query: 180 LSPRKCDTFLCNTMIKSHLHARQFTQATTLYKFLLKNVEFNPDNYTFSSLAKCCALDLEF 359
             P + D FLCNTM+KSHL + +F++A  LY  L +N  F PDNYT S++AKCCALD   
Sbjct: 71  HLPFRSDAFLCNTMMKSHLASGEFSEAVVLYASLRRNEAFVPDNYTCSTVAKCCALDRLT 130

Query: 360 WGGLGVHNHALKSGFVSNLYVATALVDMYGKLGEMSSAKKAFDEMTERTSVSWTALVDGY 539
             GLG+H HA++ GF+S++Y ATALVDMYGKLG M  A+  FDEMTER+SVSWT+L++GY
Sbjct: 131 REGLGLHAHAIRYGFLSDVYAATALVDMYGKLGFMEFARNVFDEMTERSSVSWTSLMNGY 190

Query: 540 VKIGDIDVAKRLFDLMP--EKDTAAYNVMINAYVKLGQIGLARSLFEAMPERNVVSYTCM 713
           V+ GD+  A+  F  MP  EKD AA+NV+I+ YVKLG +  A++LFEA PER+VVS+T M
Sbjct: 191 VRCGDMRTAESYFGRMPEEEKDAAAFNVLIDGYVKLGDMESAKALFEAAPERSVVSWTTM 250

Query: 714 IDGYCCNCDLGEARLLFDTMPERNLFSWNAMIGGYCQNKQP 836
           IDGYC   D+ EAR LFD MP RNL+SWNAMIGGYC+NKQP
Sbjct: 251 IDGYCNGGDVEEARTLFDLMPSRNLYSWNAMIGGYCRNKQP 291



 Score = 73.9 bits (180), Expect = 6e-11
 Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 13/221 (5%)
 Frame = +3

Query: 153 ISYARRLFDLSPRKCDTFLCNTMIKSHLHARQFTQATTLYKFLLKNVEFNPDNYTFSSL- 329
           +  AR LFDL P + + +  N MI  +   +Q  +A  L++ LL    F+PD  T  S+ 
Sbjct: 260 VEEARTLFDLMPSR-NLYSWNAMIGGYCRNKQPHEAVALFRELLSQKRFDPDGVTVVSIL 318

Query: 330 ---AKCCALDLEFWGGLGVHNHALKSGFVSNLYVATALVDMYGKLGEMSSAKKAFDEMTE 500
              A+  A+DL    G  +     ++    +  V+T+ VDM+ K GE+S A+  FD++  
Sbjct: 319 PAIAELGAVDL----GNRMFEFIKRNQLDRSSNVSTSAVDMFAKCGEISKARSVFDDLQT 374

Query: 501 RTSVSWTALVDGYVKIGDIDVAKRLFDLMPEK----DTAAYNVMINAYVKLGQIGLARSL 668
           + + +W AL++G    G  + A + F  M  K    D      +++A    G +   +SL
Sbjct: 375 KVTCTWNALINGLAVNGRAEEALKAFSEMKTKGYRPDGTTMVGVLSACNHGGLVEEGKSL 434

Query: 669 FEAMPER-----NVVSYTCMIDGYCCNCDLGEARLLFDTMP 776
              M E       +  Y C++D       L EA  L  +MP
Sbjct: 435 LGRMKEEFGIVPKIEHYGCVVDLMGRAGRLEEAEELIRSMP 475


>ref|XP_002326871.1| predicted protein [Populus trichocarpa]
          Length = 581

 Score =  318 bits (815), Expect = 2e-84
 Identities = 157/278 (56%), Positives = 201/278 (72%)
 Frame = +3

Query: 3   KKCLFLLQQRNTRATLFQIHAFMIRNALETNINLLTKLIWTFATGDPLAGISYARRLFDL 182
           ++CLFLLQ+  TR TL QIHA ++RNA++ N+N+LTK I T      L+   +AR LFD 
Sbjct: 3   RECLFLLQRCRTRKTLLQIHALILRNAIDANVNILTKFITTCGQ---LSSTRHARHLFDN 59

Query: 183 SPRKCDTFLCNTMIKSHLHARQFTQATTLYKFLLKNVEFNPDNYTFSSLAKCCALDLEFW 362
              + DTFLCN+MIKSH+  RQ   A TLYK L +   F PDN+TF+ LAKCCAL +  W
Sbjct: 60  RSHRGDTFLCNSMIKSHVVMRQLADAFTLYKDLRRETCFVPDNFTFTVLAKCCALRMAVW 119

Query: 363 GGLGVHNHALKSGFVSNLYVATALVDMYGKLGEMSSAKKAFDEMTERTSVSWTALVDGYV 542
            GL  H H +K GF  ++YV+TALVDMY K G +  A+K F++M +R+ VSWTAL+ GYV
Sbjct: 120 EGLETHGHVVKIGFCFDMYVSTALVDMYAKFGNLGLARKVFNDMPDRSLVSWTALIGGYV 179

Query: 543 KIGDIDVAKRLFDLMPEKDTAAYNVMINAYVKLGQIGLARSLFEAMPERNVVSYTCMIDG 722
           + GD+  A  LF LMP +D+AA+N++I+ YVK+G +  ARSLF+ MPERNV+S+T MI G
Sbjct: 180 RRGDMGNAWFLFKLMPGRDSAAFNLLIDGYVKVGDMESARSLFDEMPERNVISWTSMIYG 239

Query: 723 YCCNCDLGEARLLFDTMPERNLFSWNAMIGGYCQNKQP 836
           YC N D+  AR LFD MPE+NL SWNAMIGGYCQNKQP
Sbjct: 240 YCNNGDVLSARFLFDAMPEKNLVSWNAMIGGYCQNKQP 277



 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 70/243 (28%), Positives = 113/243 (46%), Gaps = 13/243 (5%)
 Frame = +3

Query: 87  ETNINLLTKLIWTFAT-GDPLAGISYARRLFDLSPRKCDTFLCNTMIKSHLHARQFTQAT 263
           E N+   T +I+ +   GD L+    AR LFD  P K +    N MI  +   +Q  +A 
Sbjct: 227 ERNVISWTSMIYGYCNNGDVLS----ARFLFDAMPEK-NLVSWNAMIGGYCQNKQPHEAL 281

Query: 264 TLYKFLLKNVEFNPDNYTFSSL----AKCCALDLEFWGGLGVHNHALKSGFVSNLYVATA 431
            L++ L  +  F P+  T  S+    A   AL+L  W    VH    +    + + V T+
Sbjct: 282 KLFRELQSSTVFEPNEVTVVSILPAIATLGALELGEW----VHRFVQRKKLDAAVNVCTS 337

Query: 432 LVDMYGKLGEMSSAKKAFDEMTERTSVSWTALVDGYVKIGDIDVAKRLFDLMPEKDTAAY 611
           LVDMY K GE+S A+K F E+ ++ + +W AL++G+   G    A   F  M ++     
Sbjct: 338 LVDMYLKCGEISKARKVFSEIPKKETATWNALINGFAMNGLASEALEAFSEMQQEGIKPN 397

Query: 612 NV----MINAYVKLGQIGLARSLFEAMPER----NVVSYTCMIDGYCCNCDLGEARLLFD 767
           ++    +++A    G +   +  F+AM E      +  Y C++D       L EA  L  
Sbjct: 398 DITMTGVLSACSHGGLVEEGKGQFKAMIESGLSPKIEHYGCLVDLLGRAGCLDEAENLIK 457

Query: 768 TMP 776
           +MP
Sbjct: 458 SMP 460


>gb|EOX96449.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
            cacao] gi|508704554|gb|EOX96450.1| Pentatricopeptide
            repeat superfamily protein isoform 1 [Theobroma cacao]
            gi|508704555|gb|EOX96451.1| Pentatricopeptide repeat
            superfamily protein isoform 1 [Theobroma cacao]
          Length = 890

 Score =  316 bits (809), Expect = 7e-84
 Identities = 157/268 (58%), Positives = 200/268 (74%), Gaps = 2/268 (0%)
 Frame = +3

Query: 39   RATLFQIHAFMIRNALETNINLLTKLIWTFATGDPLAGISYARRLFDLSPRKCDTFLCNT 218
            + TL QIHAFM+R+++ETN+NL TK I   A+   L+ +S+ARRLFD+ P + DT+LCN 
Sbjct: 319  KTTLLQIHAFMLRHSIETNLNLFTKFITACASLSTLSAVSHARRLFDVRPHENDTYLCNA 378

Query: 219  MIKSHLHARQFTQATTLYKFLLKNVE-FNPDNYTFSSLAKCCALDLEFWGGLGVHNHALK 395
            MIK+HL   QF Q+ TLYK L +  E F P+  TF +LAK CAL++  W GL +HNH +K
Sbjct: 379  MIKAHLGVNQFAQSFTLYKDLGRAEEGFVPNKITFLTLAKSCALNMAIWEGLQIHNHVIK 438

Query: 396  SGFVSNLYVATALVDMYGKLGEMSSAKKAFDEMTERTSVSWTALVDGYVKIGDIDVAKRL 575
             GF  +LYV+TAL+DMY KLG M SA+K F+EM ER+ VSWTAL+ GY K GD++ AK L
Sbjct: 439  FGFCLDLYVSTALLDMYAKLGIMGSARKVFEEMPERSLVSWTALICGYAKAGDMERAKEL 498

Query: 576  FDLMPEK-DTAAYNVMINAYVKLGQIGLARSLFEAMPERNVVSYTCMIDGYCCNCDLGEA 752
             D MPEK D+  YN MI+ YVKLG +  AR+LF  M +RNV+S+T MI+GYC + D+  A
Sbjct: 499  LDEMPEKEDSVLYNAMIDGYVKLGDLVSARNLFNQMQDRNVISWTSMINGYCNSGDVESA 558

Query: 753  RLLFDTMPERNLFSWNAMIGGYCQNKQP 836
            RLLFD+MPE+NL SWNAMIGGYCQNKQP
Sbjct: 559  RLLFDSMPEKNLVSWNAMIGGYCQNKQP 586



 Score = 84.7 bits (208), Expect = 4e-14
 Identities = 73/223 (32%), Positives = 102/223 (45%), Gaps = 15/223 (6%)
 Frame = +3

Query: 153  ISYARRLFDLSPRKCDTFLCNTMIKSHLHARQFTQATTLYKFLLKNVEFNPDNYTFSSL- 329
            +  AR LFD  P K +    N MI  +   +Q  +A  L+  +  +  F PD  T  S+ 
Sbjct: 555  VESARLLFDSMPEK-NLVSWNAMIGGYCQNKQPHEALKLFHEMQSSTFFEPDKVTIVSIL 613

Query: 330  ---AKCCALDLEFWGGLGVHNHALKSGFVSNLYVATALVDMYGKLGEMSSAKKAFDEMTE 500
               A   ALDL  W    VH+   +      + V T LVDMY K GE++ AK+ F EM E
Sbjct: 614  PAIADLGALDLGEW----VHHFVQRKKLDKAINVCTGLVDMYAKCGEINKAKRIFYEMPE 669

Query: 501  RTSVSWTALVDGYVKIGDIDVAKRLF-DLMPEKDTAAYNVMI---NAYVKLGQIGLARSL 668
            +   SW AL++GY   G    A ++F ++  E+    Y  MI   +A    G +G     
Sbjct: 670  KEIASWNALINGYAVNGCAKEALQVFLEMRNERVMPNYVTMIGVLSACNHAGLVGEGTRW 729

Query: 669  FEAMPERNVVSYTCMIDGYCCNCDL-------GEARLLFDTMP 776
            F+AM E  +   T  I+ Y C  DL        EA  L + MP
Sbjct: 730  FKAMAEFGI---TPKIEHYGCMADLLGRAGCVEEAEKLIEGMP 769



 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 9/148 (6%)
 Frame = +3

Query: 411 NLYVATALVDMYGKLGEMSSAKKAFDEMTERTSVSWTALVDGYVKIGDIDVAKRLFDLMP 590
           N+   T++++ Y   G++ SA+  FD M E+  VSW A++ GY +      A +LF  M 
Sbjct: 538 NVISWTSMINGYCNSGDVESARLLFDSMPEKNLVSWNAMIGGYCQNKQPHEALKLFHEMQ 597

Query: 591 -----EKDTAAYNVMINAYVKLGQIGLARSLFEAMP----ERNVVSYTCMIDGYCCNCDL 743
                E D      ++ A   LG + L   +   +     ++ +   T ++D Y    ++
Sbjct: 598 SSTFFEPDKVTIVSILPAIADLGALDLGEWVHHFVQRKKLDKAINVCTGLVDMYAKCGEI 657

Query: 744 GEARLLFDTMPERNLFSWNAMIGGYCQN 827
            +A+ +F  MPE+ + SWNA+I GY  N
Sbjct: 658 NKAKRIFYEMPEKEIASWNALINGYAVN 685


>gb|EXB37620.1| hypothetical protein L484_021826 [Morus notabilis]
          Length = 594

 Score =  313 bits (801), Expect = 6e-83
 Identities = 160/284 (56%), Positives = 200/284 (70%), Gaps = 6/284 (2%)
 Frame = +3

Query: 3   KKCLFLLQQRNTRATLFQIHAFMIRNALETNINLLTKLIWTFAT------GDPLAGISYA 164
           +KCL LLQQ NTRA+L QIHAF++RNALETN+NLLTK I T  +       D LA +++A
Sbjct: 11  RKCLHLLQQTNTRASLLQIHAFILRNALETNVNLLTKFIATCTSLPLSSFQDSLALLNHA 70

Query: 165 RRLFDLSPRKCDTFLCNTMIKSHLHARQFTQATTLYKFLLKNVEFNPDNYTFSSLAKCCA 344
           R++FD  P++ D+FLCN MIK+H+  RQF ++  LY+ L +   F P+NYTF  L K C 
Sbjct: 71  RKVFDRRPQRDDSFLCNCMIKAHMGLRQFAESFALYRDLRRGTCFVPNNYTFVVLVKSCG 130

Query: 345 LDLEFWGGLGVHNHALKSGFVSNLYVATALVDMYGKLGEMSSAKKAFDEMTERTSVSWTA 524
           L++    G  +  H LK+GF S+LYV TALVDMY K GE   A+  FDEM+ R+ VSWTA
Sbjct: 131 LNVAIKEGQEIRCHVLKTGFCSDLYVGTALVDMYAKFGETGYARMLFDEMSARSQVSWTA 190

Query: 525 LVDGYVKIGDIDVAKRLFDLMPEKDTAAYNVMINAYVKLGQIGLARSLFEAMPERNVVSY 704
           L+ GYV+  D+  A++LFD MPEKD+A YN MI+ Y KLG IG AR LFE M +RN+VS+
Sbjct: 191 LICGYVRSRDMINARKLFDEMPEKDSAIYNAMIDGYAKLGDIGSARDLFEEMKDRNLVSW 250

Query: 705 TCMIDGYCCNCDLGEARLLFDTMPERNLFSWNAMIGGYCQNKQP 836
           T MI GYC   DL  AR LFD MPE+NL SWN MI GYCQN QP
Sbjct: 251 TSMIYGYCHCGDLLSARSLFDAMPEKNLISWNTMISGYCQNNQP 294



 Score = 90.9 bits (224), Expect = 5e-16
 Identities = 75/243 (30%), Positives = 114/243 (46%), Gaps = 13/243 (5%)
 Frame = +3

Query: 87  ETNINLLTKLIWTFA-TGDPLAGISYARRLFDLSPRKCDTFLCNTMIKSHLHARQFTQAT 263
           + N+   T +I+ +   GD L+    AR LFD  P K +    NTMI  +    Q  +A 
Sbjct: 244 DRNLVSWTSMIYGYCHCGDLLS----ARSLFDAMPEK-NLISWNTMISGYCQNNQPLEAL 298

Query: 264 TLYKFLLKNVEFNPDNYTFSSL----AKCCALDLEFWGGLGVHNHALKSGFVSNLYVATA 431
            L++ +  +    P+  T  S+    A   ALDL  W    +H    K  F   + + TA
Sbjct: 299 KLFREMQDSTLLEPNEVTIVSILPAIADLGALDLGCW----IHQFVQKKRFDGLVKICTA 354

Query: 432 LVDMYGKLGEMSSAKKAFDEMTERTSVSWTALVDGYVKIGDIDVAKRLFDLMPEKDTAAY 611
           L+DMY K GE+  AK  FDEM E+   SW AL++G+   G  + A +LF  M +K+    
Sbjct: 355 LIDMYAKCGEVEKAKTIFDEMPEKEIASWNALINGFAVNGRGEEALQLFSEMQDKNPKPN 414

Query: 612 NV----MINAYVKLGQIGLARSLFEAMPERNVV----SYTCMIDGYCCNCDLGEARLLFD 767
           ++    +++A    G +   R  F+AM    ++     Y CM+D       L EA  L  
Sbjct: 415 DITMLGVLSASNHSGLVEEGRRCFKAMEGFGLIPQIEHYGCMVDLLGKAGCLEEAENLIK 474

Query: 768 TMP 776
           +MP
Sbjct: 475 SMP 477


>ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g44880
           [Vitis vinifera] gi|297734603|emb|CBI16654.3| unnamed
           protein product [Vitis vinifera]
          Length = 577

 Score =  301 bits (770), Expect = 2e-79
 Identities = 151/263 (57%), Positives = 192/263 (73%), Gaps = 7/263 (2%)
 Frame = +3

Query: 69  MIRNALETNINLLTKLIWTFAT-------GDPLAGISYARRLFDLSPRKCDTFLCNTMIK 227
           M+RNALETN NL TK I T ++        DPLAGI +ARR+FD  P + D FLCN+MIK
Sbjct: 1   MLRNALETNPNLFTKFIATCSSIALLAPLYDPLAGIVHARRMFDHRPHRDDAFLCNSMIK 60

Query: 228 SHLHARQFTQATTLYKFLLKNVEFNPDNYTFSSLAKCCALDLEFWGGLGVHNHALKSGFV 407
           +++  RQ++++  LY+ L +N  F PD++TFS LAK CAL++  W G  +H+H +  GF 
Sbjct: 61  AYVGMRQYSESFALYRDLRRNTSFTPDSFTFSVLAKSCALNMAIWEGQEIHSHVVAVGFC 120

Query: 408 SNLYVATALVDMYGKLGEMSSAKKAFDEMTERTSVSWTALVDGYVKIGDIDVAKRLFDLM 587
            +LY ATALVDMY K G+M  A+K FDEM +R+ VSWTAL+ GYV+ GD+D A +LFD M
Sbjct: 121 LDLYAATALVDMYAKFGKMDCARKLFDEMIDRSQVSWTALIGGYVRSGDMDNAGKLFDQM 180

Query: 588 PEKDTAAYNVMINAYVKLGQIGLARSLFEAMPERNVVSYTCMIDGYCCNCDLGEARLLFD 767
            EKD+AA+N MI+AYVKLG +  AR LF+ MPER+VVS+T MI GY  N +L  AR LFD
Sbjct: 181 IEKDSAAFNTMIDAYVKLGDMCSARKLFDEMPERSVVSWTIMIYGYSSNGNLDSARSLFD 240

Query: 768 TMPERNLFSWNAMIGGYCQNKQP 836
            MPE+NLFSWNAMI GY QNKQP
Sbjct: 241 AMPEKNLFSWNAMISGYRQNKQP 263



 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 66/217 (30%), Positives = 94/217 (43%), Gaps = 12/217 (5%)
 Frame = +3

Query: 162 ARRLFDLSPRKCDTFLCNTMIKSHLHARQFTQATTLYKFLLKNVEFNPDNYTFSS----L 329
           AR LFD  P K + F  N MI  +   +Q  +A  L+  +       PD  T  S    +
Sbjct: 235 ARSLFDAMPEK-NLFSWNAMISGYRQNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAI 293

Query: 330 AKCCALDLEFWGGLGVHNHALKSGFVSNLYVATALVDMYGKLGEMSSAKKAFDEMTERTS 509
           A   ALDL  W    VH    +        V TAL+DMY K GE+  ++  FD M E+ +
Sbjct: 294 ADLGALDLGGW----VHRFVRRKKLDRATNVGTALIDMYAKCGEIVKSRGVFDNMPEKET 349

Query: 510 VSWTALVDGYVKIGDIDVAKRLFDLMPEKDTAAYNV----MINAYVKLGQIGLARSLFEA 677
            SW AL++ +   G    A  LF  M  K      +    +++A    G +   +  F+A
Sbjct: 350 ASWNALINAFAINGRAKEALGLFMEMNHKGFMPNEITMIGVLSACNHSGLVEEGKRWFKA 409

Query: 678 MPE----RNVVSYTCMIDGYCCNCDLGEARLLFDTMP 776
           M E      +  Y CM+D       L EA  L ++MP
Sbjct: 410 MEEFGLTPKIEHYGCMVDLLGRAGCLQEAEKLMESMP 446


>ref|XP_002511599.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548779|gb|EEF50268.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 429

 Score =  287 bits (734), Expect = 4e-75
 Identities = 144/262 (54%), Positives = 186/262 (70%), Gaps = 7/262 (2%)
 Frame = +3

Query: 69  MIRNALETNINLLTKLIWTF-------ATGDPLAGISYARRLFDLSPRKCDTFLCNTMIK 227
           M+R+A+E+N+N+L K I          +  + LA I +AR++FD  P K DTFLCN+MIK
Sbjct: 1   MLRSAVESNVNILAKFITISGCLALIPSVYESLAIIQHARQVFDNRPHKDDTFLCNSMIK 60

Query: 228 SHLHARQFTQATTLYKFLLKNVEFNPDNYTFSSLAKCCALDLEFWGGLGVHNHALKSGFV 407
           +H+  RQF ++ TLY+ L K   F PDN+TF++LAK C L++  W G  +HNH LK GF 
Sbjct: 61  AHVGMRQFYESFTLYQDLRKGTGFLPDNFTFTALAKSCGLNMAVWEGFEIHNHVLKMGFG 120

Query: 408 SNLYVATALVDMYGKLGEMSSAKKAFDEMTERTSVSWTALVDGYVKIGDIDVAKRLFDLM 587
            +LYV+TALVDMY K GE+  A+K FDEM ER  VSWTAL+ G ++ GD+  A+ LFD M
Sbjct: 121 LDLYVSTALVDMYAKFGELCMARKMFDEMAERGVVSWTALIGGCMRSGDMGNARILFDQM 180

Query: 588 PEKDTAAYNVMINAYVKLGQIGLARSLFEAMPERNVVSYTCMIDGYCCNCDLGEARLLFD 767
           PEKD+AAYN M++ YVK G +  A+SLF+ MP RNV+S+T MI GYC   D+  AR LFD
Sbjct: 181 PEKDSAAYNAMLDGYVKAGDMESAQSLFDKMPARNVISWTSMIYGYCSGGDVLTARSLFD 240

Query: 768 TMPERNLFSWNAMIGGYCQNKQ 833
            MPERNLFSWNAMIGGY QN +
Sbjct: 241 AMPERNLFSWNAMIGGYSQNNK 262



 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 8/206 (3%)
 Frame = +3

Query: 93  NINLLTKLIWTFATGDPLAGISYARRLFDLSPRKCDTFLCNTMIKSHLHARQFTQATTLY 272
           N+   T +I+ + +G     +  AR LFD  P + + F  N MI  +    +  +A  L+
Sbjct: 215 NVISWTSMIYGYCSG---GDVLTARSLFDAMPER-NLFSWNAMIGGYSQNNKSHEALKLF 270

Query: 273 KFLLKNVEFNPDNYTFSS----LAKCCALDLEFWGGLGVHNHALKSGFVSNLYVATALVD 440
             +     F PD  T  S    +A   ALDL  W    +H  A       ++ V TALVD
Sbjct: 271 HEMQSRTLFEPDKVTVVSVLPAIADLGALDLGSW----IHQFARLKKIDRSINVCTALVD 326

Query: 441 MYGKLGEMSSAKKAFDEMTERTSVSWTALVDGYVKIGDIDVAKRLFDLMPEKDTAAYNV- 617
           MY K GEM  A++ FD M ++   SW AL++G+   G  D A   F  M  +     +V 
Sbjct: 327 MYAKCGEMLKARRVFDSMPKKEEASWNALINGFAVNGCADEALTAFSEMKREGVKPNDVT 386

Query: 618 ---MINAYVKLGQIGLARSLFEAMPE 686
              +++A    G +   +  F+AM E
Sbjct: 387 MISVLSACNHGGLVEEGKRWFKAMYE 412


>ref|XP_004308509.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g44880-like [Fragaria vesca subsp. vesca]
          Length = 563

 Score =  285 bits (728), Expect = 2e-74
 Identities = 142/257 (55%), Positives = 188/257 (73%), Gaps = 1/257 (0%)
 Frame = +3

Query: 69  MIRNALETNINLLTKLIWTFATGD-PLAGISYARRLFDLSPRKCDTFLCNTMIKSHLHAR 245
           M+RNALETN+NLLTK I T ++   P   I +ARR+FD  P + DTFLCN +IK+H+   
Sbjct: 1   MLRNALETNLNLLTKFITTCSSSSSPSQLIKHARRVFDRQPNRNDTFLCNAIIKAHI--A 58

Query: 246 QFTQATTLYKFLLKNVEFNPDNYTFSSLAKCCALDLEFWGGLGVHNHALKSGFVSNLYVA 425
           +  ++  LY+  L+ ++F PD YTF++LAK C LD     G  +H HA+K+G   +LYV+
Sbjct: 59  ESAESFALYR-TLRRMDFEPDGYTFTALAKSCGLDGARLEGEVIHCHAVKTGLCLDLYVS 117

Query: 426 TALVDMYGKLGEMSSAKKAFDEMTERTSVSWTALVDGYVKIGDIDVAKRLFDLMPEKDTA 605
           TA VDMY K G +  A+K FDEMTER  VSWTAL+ GY + GD+  A+RLFD MPE+D+A
Sbjct: 118 TAFVDMYVKFGRIGCARKVFDEMTERNRVSWTALICGYARAGDMGGARRLFDEMPERDSA 177

Query: 606 AYNVMINAYVKLGQIGLARSLFEAMPERNVVSYTCMIDGYCCNCDLGEARLLFDTMPERN 785
           A+N +I+ YVK+G++GLARSLF+ M +RNVVS+T MI GYC   D+G A+  FD+MP++N
Sbjct: 178 AFNALIDGYVKVGEMGLARSLFDEMRDRNVVSWTSMIYGYCHRGDVGAAKSFFDSMPKKN 237

Query: 786 LFSWNAMIGGYCQNKQP 836
           L SWN MIGGYCQNKQP
Sbjct: 238 LVSWNVMIGGYCQNKQP 254



 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 71/243 (29%), Positives = 110/243 (45%), Gaps = 13/243 (5%)
 Frame = +3

Query: 87  ETNINLLTKLIWTFA-TGDPLAGISYARRLFDLSPRKCDTFLCNTMIKSHLHARQFTQAT 263
           + N+   T +I+ +   GD    +  A+  FD  P+K +    N MI  +   +Q  +A 
Sbjct: 204 DRNVVSWTSMIYGYCHRGD----VGAAKSFFDSMPKK-NLVSWNVMIGGYCQNKQPHEAV 258

Query: 264 TLYKFLLKNVEFNPDNYTFSSL----AKCCALDLEFWGGLGVHNHALKSGFVSNLYVATA 431
            L+  +  +    PD  T  S+    A   ALDL  W    V    L    ++N+Y  TA
Sbjct: 259 RLFHEMQSSTSLEPDAVTIVSILPAIADLGALDLGHWVHEFVERKKLDK--LTNIY--TA 314

Query: 432 LVDMYGKLGEMSSAKKAFDEMTERTSVSWTALVDGYVKIGDIDVAKRLFDLMP----EKD 599
           LVDMY K GE++ A+K FDEM E+ + SW AL++G+   G    A  +F  M     E +
Sbjct: 315 LVDMYAKCGEITKARKLFDEMPEKETASWNALINGFAVNGHGKEALEVFSEMQRGKYEPN 374

Query: 600 TAAYNVMINAYVKLGQIGLARSLFEAMPERNVV----SYTCMIDGYCCNCDLGEARLLFD 767
              +  +++A    G +   R  F+ M    ++     Y CM+D       L E   L  
Sbjct: 375 NITFLSVLSACNHCGLVEEGRFWFKKMENFGLIPQIEHYGCMVDLLGRAGCLEETEKLIK 434

Query: 768 TMP 776
           +MP
Sbjct: 435 SMP 437


>gb|EMJ05647.1| hypothetical protein PRUPE_ppa026467mg [Prunus persica]
          Length = 508

 Score =  285 bits (728), Expect = 2e-74
 Identities = 145/263 (55%), Positives = 186/263 (70%), Gaps = 7/263 (2%)
 Frame = +3

Query: 69  MIRNALETNINLLTKLIWT------FATG-DPLAGISYARRLFDLSPRKCDTFLCNTMIK 227
           M+R++LETN+NLLTK I T      FA+  +PLA I + R +F+  P K DTFL N+MI 
Sbjct: 1   MLRHSLETNVNLLTKFITTCGSIALFASHQNPLALIRHGRHVFNYRPNKDDTFLSNSMII 60

Query: 228 SHLHARQFTQATTLYKFLLKNVEFNPDNYTFSSLAKCCALDLEFWGGLGVHNHALKSGFV 407
           + +  RQF  + TLY+ L K+  F PD YTF++LAK C LD+  W G  +H H +K G  
Sbjct: 61  ARMDMRQFADSFTLYRNLRKDTGFKPDGYTFTALAKSCGLDVAIWEGQELHCHVIKVGLC 120

Query: 408 SNLYVATALVDMYGKLGEMSSAKKAFDEMTERTSVSWTALVDGYVKIGDIDVAKRLFDLM 587
            +LYV+T+LVDMY K G MS A K F+EMTE + +SWTAL+ GY ++GD+  A+RLFD M
Sbjct: 121 LDLYVSTSLVDMYAKFGSMSCASKLFNEMTETSRLSWTALICGYARLGDMGNARRLFDQM 180

Query: 588 PEKDTAAYNVMINAYVKLGQIGLARSLFEAMPERNVVSYTCMIDGYCCNCDLGEARLLFD 767
           PEKD AA+N MI+ YVKLG +G ARSLF+ M +RNVVS+T M+ GYC + D+  AR LFD
Sbjct: 181 PEKDLAAFNAMIDGYVKLGDMGPARSLFDEMTDRNVVSWTSMMYGYCHHGDVQSARSLFD 240

Query: 768 TMPERNLFSWNAMIGGYCQNKQP 836
            M E+NL SWN MIGGY QNKQP
Sbjct: 241 AMAEKNLISWNVMIGGYSQNKQP 263



 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 39/90 (43%), Positives = 55/90 (61%)
 Frame = +3

Query: 411 NLYVATALVDMYGKLGEMSSAKKAFDEMTERTSVSWTALVDGYVKIGDIDVAKRLFDLMP 590
           +L    A++D Y KLG+M  A+  FDEMT+R  VSWT+++ GY   GD+  A+ LFD M 
Sbjct: 184 DLAAFNAMIDGYVKLGDMGPARSLFDEMTDRNVVSWTSMMYGYCHHGDVQSARSLFDAMA 243

Query: 591 EKDTAAYNVMINAYVKLGQIGLARSLFEAM 680
           EK+  ++NVMI  Y +  Q   A  LF  +
Sbjct: 244 EKNLISWNVMIGGYSQNKQPHEALKLFHEL 273


>ref|XP_003551717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g44880-like [Glycine max]
          Length = 599

 Score =  281 bits (720), Expect = 2e-73
 Identities = 146/284 (51%), Positives = 198/284 (69%), Gaps = 7/284 (2%)
 Frame = +3

Query: 3   KKCLFLLQQRNTRA-TLFQIHAFMIRNALETNINLLTKLIWTFAT-----GDPLAGISYA 164
           + CL +LQ R     TL QIHAF++R++L +N+NLLT  + T A+       PLA I++A
Sbjct: 17  RTCLHILQCRTKSIPTLLQIHAFILRHSLHSNLNLLTAFVTTCASLAASAKRPLAIINHA 76

Query: 165 RRLFDLSPRKCDTFLCNTMIKSHLHARQFTQATTLYKFLLKNVE-FNPDNYTFSSLAKCC 341
           RR F+ +  + DTFLCN+MI +H  ARQF+Q  TL++ L +    F PD YTF++L K C
Sbjct: 77  RRFFNATHTR-DTFLCNSMIAAHFAARQFSQPFTLFRDLRRQAPPFTPDGYTFTALVKGC 135

Query: 342 ALDLEFWGGLGVHNHALKSGFVSNLYVATALVDMYGKLGEMSSAKKAFDEMTERTSVSWT 521
           A  +    G  +H   LK+G   +LYVATALVDMY K G + SA+K FDEM+ R+ VSWT
Sbjct: 136 ATRVATGEGTLLHGMVLKNGVCFDLYVATALVDMYVKFGVLGSARKVFDEMSVRSKVSWT 195

Query: 522 ALVDGYVKIGDIDVAKRLFDLMPEKDTAAYNVMINAYVKLGQIGLARSLFEAMPERNVVS 701
           A++ GY + GD+  A+RLFD M ++D  A+N MI+ YVK+G +GLAR LF  M ERNVVS
Sbjct: 196 AVIVGYARCGDMSEARRLFDEMEDRDIVAFNAMIDGYVKMGCVGLARELFNEMRERNVVS 255

Query: 702 YTCMIDGYCCNCDLGEARLLFDTMPERNLFSWNAMIGGYCQNKQ 833
           +T M+ GYC N D+  A+L+FD MPE+N+F+WNAMIGGYCQN++
Sbjct: 256 WTSMVSGYCGNGDVENAKLMFDLMPEKNVFTWNAMIGGYCQNRR 299



 Score = 87.4 bits (215), Expect = 6e-15
 Identities = 70/220 (31%), Positives = 102/220 (46%), Gaps = 12/220 (5%)
 Frame = +3

Query: 153 ISYARRLFDLSPRKCDTFLCNTMIKSHLHARQFTQATTLYKFLLKNVEFNPDNYT----F 320
           +  A+ +FDL P K + F  N MI  +   R+   A  L++ + +     P+  T     
Sbjct: 269 VENAKLMFDLMPEK-NVFTWNAMIGGYCQNRRSHDALELFREM-QTASVEPNEVTVVCVL 326

Query: 321 SSLAKCCALDLEFWGGLGVHNHALKSGFVSNLYVATALVDMYGKLGEMSSAKKAFDEMTE 500
            ++A   ALDL  W    +H  AL+     +  + TAL+DMY K GE++ AK AF+ MTE
Sbjct: 327 PAVADLGALDLGRW----IHRFALRKKLDRSARIGTALIDMYAKCGEITKAKLAFEGMTE 382

Query: 501 RTSVSWTALVDGYVKIGDIDVAKRLFDLMPEKDTAAYNV----MINAYVKLGQIGLARSL 668
           R + SW AL++G+   G    A  +F  M E+      V    +++A    G +   R  
Sbjct: 383 RETASWNALINGFAVNGCAKEALEVFARMIEEGFGPNEVTMIGVLSACNHCGLVEEGRRW 442

Query: 669 FEAMPE----RNVVSYTCMIDGYCCNCDLGEARLLFDTMP 776
           F AM        V  Y CM+D       L EA  L  TMP
Sbjct: 443 FNAMERFGIAPQVEHYGCMVDLLGRAGCLDEAENLIQTMP 482


>gb|ESW11626.1| hypothetical protein PHAVU_008G046100g [Phaseolus vulgaris]
          Length = 602

 Score =  280 bits (717), Expect = 3e-73
 Identities = 148/285 (51%), Positives = 195/285 (68%), Gaps = 8/285 (2%)
 Frame = +3

Query: 3   KKCLFLLQ-QRNTRATLFQIHAFMIRNALETNINLLTKLIWTFAT------GDPLAGISY 161
           ++CL LLQ +  +  TL QIHAFM+RN+   N+NLLT  I T A+        PLA + +
Sbjct: 18  RRCLQLLQCKTKSVTTLLQIHAFMLRNSFHNNLNLLTAFITTCASLAATSPTRPLAVVQH 77

Query: 162 ARRLFDLSPRKCDTFLCNTMIKSHLHARQFTQATTLYKFLL-KNVEFNPDNYTFSSLAKC 338
           AR  FDL  R  DTFLCN+MI +H  ARQF++  TL++ L  K   F PD YTF++L K 
Sbjct: 78  ARSFFDLV-RTRDTFLCNSMIATHFAARQFSEPFTLFRDLRRKTPPFTPDGYTFTALVKG 136

Query: 339 CALDLEFWGGLGVHNHALKSGFVSNLYVATALVDMYGKLGEMSSAKKAFDEMTERTSVSW 518
           C+  +    G  +H   L++G   +LYVATALVDMY K G + SAKK FDEM+ R+ VSW
Sbjct: 137 CSARVATREGPQLHGVVLRNGVCFDLYVATALVDMYVKFGVLDSAKKVFDEMSVRSRVSW 196

Query: 519 TALVDGYVKIGDIDVAKRLFDLMPEKDTAAYNVMINAYVKLGQIGLARSLFEAMPERNVV 698
           TA++ GY + GD+  A+RLFD M ++D  A+N MI+ Y K G +GLAR LF+ M E+NVV
Sbjct: 197 TAVIVGYARCGDMGEARRLFDEMEDRDVVAFNAMIDGYAKTGCVGLARELFDKMGEKNVV 256

Query: 699 SYTCMIDGYCCNCDLGEARLLFDTMPERNLFSWNAMIGGYCQNKQ 833
           S+T MI GYC N D+  ARL+FD MP++NLF+WNAMIGGYCQN++
Sbjct: 257 SWTSMISGYCGNGDVENARLMFDAMPDKNLFTWNAMIGGYCQNRR 301



 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 70/220 (31%), Positives = 103/220 (46%), Gaps = 12/220 (5%)
 Frame = +3

Query: 153 ISYARRLFDLSPRKCDTFLCNTMIKSHLHARQFTQATTLYKFLLKNVEFNPDNYTF---- 320
           +  AR +FD  P K + F  N MI  +   R+  +A  L++ + + V   P+  T     
Sbjct: 271 VENARLMFDAMPDK-NLFTWNAMIGGYCQNRRSHEALELFREM-QTVLVEPNEVTILCVL 328

Query: 321 SSLAKCCALDLEFWGGLGVHNHALKSGFVSNLYVATALVDMYGKLGEMSSAKKAFDEMTE 500
            ++A   ALDL  W    +H  A +  F  +  V TAL+DMY K GE++ AK  F+EMTE
Sbjct: 329 PAVADLGALDLGGW----IHRFAQRKKFDRSARVGTALIDMYAKCGEITKAKLVFEEMTE 384

Query: 501 RTSVSWTALVDGYVKIGDIDVAKRLFDLMPEKDTAAYNV----MINAYVKLGQIGLARSL 668
           R + SW AL++G+   G    A  +F  M E+      V    +++A    G +   R  
Sbjct: 385 RETASWNALINGFAVNGCAKEALEVFARMVEEGFRPNEVTMITVLSACNHCGLVEEGRRW 444

Query: 669 FEAMPERNVV----SYTCMIDGYCCNCDLGEARLLFDTMP 776
           F+ M    +V     Y C+ID       L EA  L   MP
Sbjct: 445 FKEMERFGIVPEIEHYGCVIDLLGRAGCLDEAEKLIQAMP 484



 Score = 83.6 bits (205), Expect = 8e-14
 Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 39/172 (22%)
 Frame = +3

Query: 429 ALVDMYGKLGEMSSAKKAFDEMTERTSVSWTALVDGYVKIGDIDVAKRLFDLMPEKDTAA 608
           A++D Y K G +  A++ FD+M E+  VSWT+++ GY   GD++ A+ +FD MP+K+   
Sbjct: 229 AMIDGYAKTGCVGLARELFDKMGEKNVVSWTSMISGYCGNGDVENARLMFDAMPDKNLFT 288

Query: 609 YNVMINAYVKLGQIGLARSLFEAMP----ERNVVSYTC---------------------- 710
           +N MI  Y +  +   A  LF  M     E N V+  C                      
Sbjct: 289 WNAMIGGYCQNRRSHEALELFREMQTVLVEPNEVTILCVLPAVADLGALDLGGWIHRFAQ 348

Query: 711 -------------MIDGYCCNCDLGEARLLFDTMPERNLFSWNAMIGGYCQN 827
                        +ID Y    ++ +A+L+F+ M ER   SWNA+I G+  N
Sbjct: 349 RKKFDRSARVGTALIDMYAKCGEITKAKLVFEEMTERETASWNALINGFAVN 400


>ref|XP_006293876.1| hypothetical protein CARUB_v10022861mg [Capsella rubella]
           gi|565472150|ref|XP_006293877.1| hypothetical protein
           CARUB_v10022861mg [Capsella rubella]
           gi|482562584|gb|EOA26774.1| hypothetical protein
           CARUB_v10022861mg [Capsella rubella]
           gi|482562585|gb|EOA26775.1| hypothetical protein
           CARUB_v10022861mg [Capsella rubella]
          Length = 596

 Score =  278 bits (710), Expect = 2e-72
 Identities = 139/282 (49%), Positives = 196/282 (69%), Gaps = 4/282 (1%)
 Frame = +3

Query: 3   KKCLFLLQQ--RNTRATLFQIHAFMIRNALETNINLLTKLIWTFATGDPLAGISYARRLF 176
           + C  LLQ+  R  R +L QI+AFM+R+A+E+N+ + TKL++  ++   + GI YAR+LF
Sbjct: 17  RNCFNLLQKSHRLGRFSLLQIYAFMLRHAIESNVQIFTKLLFCSSS---VVGIGYARKLF 73

Query: 177 DLSPRKCDTFLCNTMIKSHLHARQFTQATTLYKFLLK-NVEFNPDNYTFSSLAKCCALDL 353
           D  P + D+FLCN+M+K++L  RQ+T +  LY+ L K +  F PDN+TF++L K C L L
Sbjct: 74  DQRPHREDSFLCNSMVKAYLDTRQYTDSFALYRDLRKEDTCFAPDNFTFTTLTKSCTLSL 133

Query: 354 EFWGGLGVHNHALKSGFVSNLYVATALVDMYGKLGEMSSAKKAFDEMTERTSVSWTALVD 533
             + GL +H+   +SGF +++YV+T +VDMY K G+M  A+  FDEM +R+ VSWTAL+ 
Sbjct: 134 CVYQGLQLHSQIWRSGFCADMYVSTGVVDMYAKFGKMGCARNVFDEMPQRSEVSWTALIC 193

Query: 534 GYVKIGDIDVAKRLFDLMPE-KDTAAYNVMINAYVKLGQIGLARSLFEAMPERNVVSYTC 710
           GYV+ G++D+A +LFD MP  KD   YN M++ YVK G +  AR LF+ M  + V+++T 
Sbjct: 194 GYVRCGELDLASKLFDEMPHVKDVVIYNAMMDGYVKFGDMTSARRLFDEMTYKTVITWTT 253

Query: 711 MIDGYCCNCDLGEARLLFDTMPERNLFSWNAMIGGYCQNKQP 836
           MI GY  N D+  AR LFD M ERNL SWN MIGGYCQNKQP
Sbjct: 254 MIHGYSNNKDIESARQLFDAMAERNLVSWNTMIGGYCQNKQP 295



 Score = 94.0 bits (232), Expect = 6e-17
 Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 40/181 (22%)
 Frame = +3

Query: 405 VSNLYVATALVDMYGKLGEMSSAKKAFDEMTERTSVSWTALVDGYVKIGDIDVAKRLFDL 584
           V ++ +  A++D Y K G+M+SA++ FDEMT +T ++WT ++ GY    DI+ A++LFD 
Sbjct: 214 VKDVVIYNAMMDGYVKFGDMTSARRLFDEMTYKTVITWTTMIHGYSNNKDIESARQLFDA 273

Query: 585 MPEKDTAAYNVMINAYVKLGQIGLARSLFEAMP--------------------------- 683
           M E++  ++N MI  Y +  Q   A  LF+ M                            
Sbjct: 274 MAERNLVSWNTMIGGYCQNKQPHAAIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSL 333

Query: 684 -------------ERNVVSYTCMIDGYCCNCDLGEARLLFDTMPERNLFSWNAMIGGYCQ 824
                        ++ V   T ++D Y     + +A+ +FD MPE+ + SWNAMI GY  
Sbjct: 334 GEWCHHFVQRKKLDKKVKVCTAVLDMYSKCGKIEKAKSMFDEMPEKEVASWNAMIHGYAM 393

Query: 825 N 827
           N
Sbjct: 394 N 394



 Score = 74.3 bits (181), Expect = 5e-11
 Identities = 62/219 (28%), Positives = 95/219 (43%), Gaps = 11/219 (5%)
 Frame = +3

Query: 153 ISYARRLFDLSPRKCDTFLCNTMIKSHLHARQFTQATTLYKFLLKNVEFNPDNYTFSSLA 332
           I  AR+LFD    + +    NTMI  +   +Q   A  L++ +      +PD+ T  S+ 
Sbjct: 264 IESARQLFDAMAER-NLVSWNTMIGGYCQNKQPHAAIRLFQEMQATTSLDPDDVTILSVL 322

Query: 333 KCC----ALDLEFWGGLGVHNHALKSGFVSNLYVATALVDMYGKLGEMSSAKKAFDEMTE 500
                  AL L  W     H+   +      + V TA++DMY K G++  AK  FDEM E
Sbjct: 323 PAISDTGALSLGEW----CHHFVQRKKLDKKVKVCTAVLDMYSKCGKIEKAKSMFDEMPE 378

Query: 501 RTSVSWTALVDGYVKIGDIDVAKRLFDLMPEK---DTAAYNVMINAYVKLGQIGLARSLF 671
           +   SW A++ GY   G+   A  L+  M ++   D      +++A    G +   +  F
Sbjct: 379 KEVASWNAMIHGYAMNGNARAALDLYLAMLKEVKPDDITVLAVLSACNHGGLVEEGKKWF 438

Query: 672 EAMPE----RNVVSYTCMIDGYCCNCDLGEARLLFDTMP 776
             M E      +  Y CM+D      +L EA  L   MP
Sbjct: 439 HVMREFGLNAKIEHYGCMVDLLGRAGNLDEAEDLITNMP 477


>ref|XP_004489099.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g44880-like [Cicer arietinum]
          Length = 600

 Score =  266 bits (679), Expect = 9e-69
 Identities = 136/288 (47%), Positives = 194/288 (67%), Gaps = 10/288 (3%)
 Frame = +3

Query: 3   KKCLFLLQQRN-TRATLFQIHAFMIRNALETNINLLTKLIWTFAT--------GDPLAGI 155
           +KC  LLQ +  T  TL QIHAF+I N+L  N+NLLT  I +  +         D ++ +
Sbjct: 13  RKCFHLLQSKTKTFKTLLQIHAFIICNSLHNNLNLLTNFISSSTSLASSSSRKHDAVSIV 72

Query: 156 SYARRLFDLSPRKC-DTFLCNTMIKSHLHARQFTQATTLYKFLLKNVEFNPDNYTFSSLA 332
            +ARR FD +P    D FLCNT+I +H   RQF Q+ TLY+   +  +F P +YTF+ + 
Sbjct: 73  QHARRFFDFTPTHIRDEFLCNTIINAHFSIRQFDQSFTLYRDSFRG-DFVPSSYTFNLVL 131

Query: 333 KCCALDLEFWGGLGVHNHALKSGFVSNLYVATALVDMYGKLGEMSSAKKAFDEMTERTSV 512
           K C + +    GL VH   LK+GF ++LYV T+LVDMY K G + SA+K FDEM+ R+ V
Sbjct: 132 KGCGVCMALREGLEVHCVVLKNGFCADLYVGTSLVDMYVKFGFLGSARKVFDEMSVRSLV 191

Query: 513 SWTALVDGYVKIGDIDVAKRLFDLMPEKDTAAYNVMINAYVKLGQIGLARSLFEAMPERN 692
           SWTA++ GY + GD+  A++LFD+MP++D AA+N MI+ YVK+G + LAR LF+ M ++N
Sbjct: 192 SWTAVIVGYARCGDMSEARKLFDVMPDRDIAAFNAMIDGYVKMGCMDLARELFDKMKDKN 251

Query: 693 VVSYTCMIDGYCCNCDLGEARLLFDTMPERNLFSWNAMIGGYCQNKQP 836
           V+S+T M+ GYC + D+  AR +FD MP +N+ SWNAMI GYC+N++P
Sbjct: 252 VISWTSMVHGYCEDGDVVAARFMFDCMPVKNVLSWNAMIRGYCENRRP 299



 Score = 77.4 bits (189), Expect = 6e-12
 Identities = 66/217 (30%), Positives = 98/217 (45%), Gaps = 12/217 (5%)
 Frame = +3

Query: 162 ARRLFDLSPRKCDTFLCNTMIKSHLHARQFTQATTLYKFLLKNVEFNPDNYTFSSL---- 329
           AR +FD  P K +    N MI+ +   R+   A  L+  +  +++   +  T  S+    
Sbjct: 271 ARFMFDCMPVK-NVLSWNAMIRGYCENRRPHDALKLFCEMRGSLDMEMNKVTVVSVLPAV 329

Query: 330 AKCCALDLEFWGGLGVHNHALKSGFVSNLYVATALVDMYGKLGEMSSAKKAFDEMTERTS 509
           A   ALDL  W    +H    ++    +++V  ALVDMY K GE+  AK  F+EM E+ +
Sbjct: 330 ADLSALDLGVW----IHGFVQRNRLDEDVHVCNALVDMYAKCGEIGKAKLLFEEMNEKDT 385

Query: 510 VSWTALVDGYVKIGDIDVAKRLFDLMP----EKDTAAYNVMINAYVKLGQIGLARSLFEA 677
            SW AL++GY   G    A  +F  M     E +      +++A    G +   R  F+ 
Sbjct: 386 SSWNALINGYGVNGCAKEALEVFAAMLREGFEPNEITMTSVLSACNHCGLVEEGRRCFKE 445

Query: 678 MPERNVV----SYTCMIDGYCCNCDLGEARLLFDTMP 776
           M    +V     Y CMID       L EA  L  TMP
Sbjct: 446 MERFGIVPQIEHYGCMIDLLGRAGCLDEAENLICTMP 482


>ref|XP_002880144.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325983|gb|EFH56403.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 555

 Score =  265 bits (678), Expect = 1e-68
 Identities = 125/258 (48%), Positives = 177/258 (68%), Gaps = 1/258 (0%)
 Frame = +3

Query: 69  MIRNALETNINLLTKLIWTFATGDPLAGISYARRLFDLSPRKCDTFLCNTMIKSHLHARQ 248
           M+R+A+ETN+ + TK +   A+     GI YAR+LFD  P + D+FLCN+MIK++L  R 
Sbjct: 1   MLRHAIETNVQIFTKFLVISASA---VGIGYARKLFDQRPHREDSFLCNSMIKAYLETRH 57

Query: 249 FTQATTLYKFLLKNVEFNPDNYTFSSLAKCCALDLEFWGGLGVHNHALKSGFVSNLYVAT 428
           +  +   Y+ L K     PDN+TF+++ K C L +  + GL +H+   +SGF +++YV+T
Sbjct: 58  YNDSFAFYRDLRKETCLAPDNFTFTTMTKSCTLSMCVYQGLQLHSQIWRSGFCADMYVST 117

Query: 429 ALVDMYGKLGEMSSAKKAFDEMTERTSVSWTALVDGYVKIGDIDVAKRLFDLMPE-KDTA 605
            +VDMY K G+M  A+  FDEM +R+ VSWTAL+ GYV+ G++D+A +LFD MP+ KD  
Sbjct: 118 GVVDMYAKFGKMGCARNVFDEMPQRSEVSWTALICGYVRFGELDLASKLFDQMPQVKDVV 177

Query: 606 AYNVMINAYVKLGQIGLARSLFEAMPERNVVSYTCMIDGYCCNCDLGEARLLFDTMPERN 785
            YN M++ +VK G +  AR LF+ M  + V+++T MI GYC + D+  AR LFD MPERN
Sbjct: 178 IYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNSNDIDSARKLFDAMPERN 237

Query: 786 LFSWNAMIGGYCQNKQPQ 839
           L SWN MIGGYCQNKQPQ
Sbjct: 238 LVSWNTMIGGYCQNKQPQ 255



 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 56/181 (30%), Positives = 90/181 (49%), Gaps = 40/181 (22%)
 Frame = +3

Query: 405 VSNLYVATALVDMYGKLGEMSSAKKAFDEMTERTSVSWTALVDGYVKIGDIDVAKRLFDL 584
           V ++ +  A++D + K G+M+SA++ FDEMT +T ++WT ++ GY    DID A++LFD 
Sbjct: 173 VKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNSNDIDSARKLFDA 232

Query: 585 MPEKDTAAYNVMINAYVKLGQIGLARSLFEAMP--------------------------- 683
           MPE++  ++N MI  Y +  Q   A  LF+ M                            
Sbjct: 233 MPERNLVSWNTMIGGYCQNKQPQEAIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSL 292

Query: 684 -------------ERNVVSYTCMIDGYCCNCDLGEARLLFDTMPERNLFSWNAMIGGYCQ 824
                        ++ V   T ++D Y    ++ +A+ +FD MPE+ + SWNAMI GY  
Sbjct: 293 GEWCHCFVQRKNLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYAL 352

Query: 825 N 827
           N
Sbjct: 353 N 353



 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 65/219 (29%), Positives = 98/219 (44%), Gaps = 11/219 (5%)
 Frame = +3

Query: 153 ISYARRLFDLSPRKCDTFLCNTMIKSHLHARQFTQATTLYKFLLKNVEFNPDNYTFSSLA 332
           I  AR+LFD  P + +    NTMI  +   +Q  +A  L++ +      +PD+ T  S+ 
Sbjct: 223 IDSARKLFDAMPER-NLVSWNTMIGGYCQNKQPQEAIRLFQEMQATTSLDPDDVTILSVL 281

Query: 333 KCC----ALDLEFWGGLGVHNHALKSGFVSNLYVATALVDMYGKLGEMSSAKKAFDEMTE 500
                  AL L  W     H    +      + V TA++DMY K GE+  AK+ FDEM E
Sbjct: 282 PAISDTGALSLGEW----CHCFVQRKNLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPE 337

Query: 501 RTSVSWTALVDGYVKIGDIDVAKRLFDLMPEK---DTAAYNVMINAYVKLGQIGLARSLF 671
           +   SW A++ GY   G+   A  LF  M ++   D      +I+A    G +   R  F
Sbjct: 338 KQVASWNAMIHGYALNGNAHAALDLFLTMAKEEKPDEITMLAVISACNHGGLVEEGRKWF 397

Query: 672 EAMPE----RNVVSYTCMIDGYCCNCDLGEARLLFDTMP 776
           + M +      +  Y CM+D      +L +A  L   MP
Sbjct: 398 QMMRKFGLNAKIEHYGCMVDLLGRAGNLKQAEHLITNMP 436


>gb|ABE65907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 555

 Score =  265 bits (677), Expect = 2e-68
 Identities = 127/258 (49%), Positives = 178/258 (68%), Gaps = 1/258 (0%)
 Frame = +3

Query: 69  MIRNALETNINLLTKLIWTFATGDPLAGISYARRLFDLSPRKCDTFLCNTMIKSHLHARQ 248
           M+R+A+ETN+ + TK +   A+     GI YAR+LFD  P++ D+FL N+MIK++L  RQ
Sbjct: 1   MLRHAIETNVQIFTKFLVISASA---VGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQ 57

Query: 249 FTQATTLYKFLLKNVEFNPDNYTFSSLAKCCALDLEFWGGLGVHNHALKSGFVSNLYVAT 428
           +  +  LY+ L K   F PDN+TF++L K C+L +  + GL +H+   + GF +++YV+T
Sbjct: 58  YPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVST 117

Query: 429 ALVDMYGKLGEMSSAKKAFDEMTERTSVSWTALVDGYVKIGDIDVAKRLFDLMPE-KDTA 605
            +VDMY K G+M  A+ AFDEM  R+ VSWTAL+ GY++ G++D+A +LFD MP  KD  
Sbjct: 118 GVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVV 177

Query: 606 AYNVMINAYVKLGQIGLARSLFEAMPERNVVSYTCMIDGYCCNCDLGEARLLFDTMPERN 785
            YN M++ +VK G +  AR LF+ M  + V+++T MI GYC   D+  AR LFD MPERN
Sbjct: 178 IYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERN 237

Query: 786 LFSWNAMIGGYCQNKQPQ 839
           L SWN MIGGYCQNKQPQ
Sbjct: 238 LVSWNTMIGGYCQNKQPQ 255



 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 67/219 (30%), Positives = 94/219 (42%), Gaps = 11/219 (5%)
 Frame = +3

Query: 153 ISYARRLFDLSPRKCDTFLCNTMIKSHLHARQFTQATTLYKFLLKNVEFNPDNYTFSSLA 332
           I  AR+LFD  P + +    NTMI  +   +Q  +  TL++ +      +PD+ T  S+ 
Sbjct: 223 IDAARKLFDAMPER-NLVSWNTMIGGYCQNKQPQEGITLFQEMQATTSLDPDDVTILSVL 281

Query: 333 KCC----ALDLEFWGGLGVHNHALKSGFVSNLYVATALVDMYGKLGEMSSAKKAFDEMTE 500
                  AL L  W     H    +      + V TA++DMY K GE+  AK+ FDEM E
Sbjct: 282 PAISDTGALSLGEW----CHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPE 337

Query: 501 RTSVSWTALVDGYVKIGDIDVAKRLFDLM---PEKDTAAYNVMINAYVKLGQIGLARSLF 671
           +   SW A++ GY   G+   A  LF  M    + D      +I A    G +   R  F
Sbjct: 338 KQVASWNAMIHGYALNGNARAALDLFVTMMIEEKPDEITMLAVITACNHGGLVEEGRKWF 397

Query: 672 EAMPE----RNVVSYTCMIDGYCCNCDLGEARLLFDTMP 776
             M E      +  Y CM+D       L EA  L   MP
Sbjct: 398 HVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMP 436


>ref|NP_182015.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546766|sp|Q1PEU4.2|PP201_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g44880 gi|2344896|gb|AAC31836.1| hypothetical protein
           [Arabidopsis thaliana] gi|330255385|gb|AEC10479.1|
           Pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 555

 Score =  265 bits (677), Expect = 2e-68
 Identities = 127/258 (49%), Positives = 178/258 (68%), Gaps = 1/258 (0%)
 Frame = +3

Query: 69  MIRNALETNINLLTKLIWTFATGDPLAGISYARRLFDLSPRKCDTFLCNTMIKSHLHARQ 248
           M+R+A+ETN+ + TK +   A+     GI YAR+LFD  P++ D+FL N+MIK++L  RQ
Sbjct: 1   MLRHAIETNVQIFTKFLVISASA---VGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQ 57

Query: 249 FTQATTLYKFLLKNVEFNPDNYTFSSLAKCCALDLEFWGGLGVHNHALKSGFVSNLYVAT 428
           +  +  LY+ L K   F PDN+TF++L K C+L +  + GL +H+   + GF +++YV+T
Sbjct: 58  YPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVST 117

Query: 429 ALVDMYGKLGEMSSAKKAFDEMTERTSVSWTALVDGYVKIGDIDVAKRLFDLMPE-KDTA 605
            +VDMY K G+M  A+ AFDEM  R+ VSWTAL+ GY++ G++D+A +LFD MP  KD  
Sbjct: 118 GVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVV 177

Query: 606 AYNVMINAYVKLGQIGLARSLFEAMPERNVVSYTCMIDGYCCNCDLGEARLLFDTMPERN 785
            YN M++ +VK G +  AR LF+ M  + V+++T MI GYC   D+  AR LFD MPERN
Sbjct: 178 IYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERN 237

Query: 786 LFSWNAMIGGYCQNKQPQ 839
           L SWN MIGGYCQNKQPQ
Sbjct: 238 LVSWNTMIGGYCQNKQPQ 255



 Score = 80.9 bits (198), Expect = 5e-13
 Identities = 66/219 (30%), Positives = 93/219 (42%), Gaps = 11/219 (5%)
 Frame = +3

Query: 153 ISYARRLFDLSPRKCDTFLCNTMIKSHLHARQFTQATTLYKFLLKNVEFNPDNYTFSSLA 332
           I  AR+LFD  P + +    NTMI  +   +Q  +   L++ +      +PD+ T  S+ 
Sbjct: 223 IDAARKLFDAMPER-NLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVL 281

Query: 333 KCC----ALDLEFWGGLGVHNHALKSGFVSNLYVATALVDMYGKLGEMSSAKKAFDEMTE 500
                  AL L  W     H    +      + V TA++DMY K GE+  AK+ FDEM E
Sbjct: 282 PAISDTGALSLGEW----CHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPE 337

Query: 501 RTSVSWTALVDGYVKIGDIDVAKRLFDLM---PEKDTAAYNVMINAYVKLGQIGLARSLF 671
           +   SW A++ GY   G+   A  LF  M    + D      +I A    G +   R  F
Sbjct: 338 KQVASWNAMIHGYALNGNARAALDLFVTMMIEEKPDEITMLAVITACNHGGLVEEGRKWF 397

Query: 672 EAMPE----RNVVSYTCMIDGYCCNCDLGEARLLFDTMP 776
             M E      +  Y CM+D       L EA  L   MP
Sbjct: 398 HVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMP 436


>ref|XP_006397667.1| hypothetical protein EUTSA_v10001725mg [Eutrema salsugineum]
           gi|557098740|gb|ESQ39120.1| hypothetical protein
           EUTSA_v10001725mg [Eutrema salsugineum]
          Length = 644

 Score =  264 bits (674), Expect = 3e-68
 Identities = 126/258 (48%), Positives = 179/258 (69%), Gaps = 1/258 (0%)
 Frame = +3

Query: 69  MIRNALETNINLLTKLIWTFATGDPLAGISYARRLFDLSPRKCDTFLCNTMIKSHLHARQ 248
           M+R+A++TN+ + TK +   A+     GI++AR+LFD  P++ D+FLCN+MIK++L  RQ
Sbjct: 1   MLRHAIDTNVQIFTKFLVVSASA---VGITHARKLFDQRPQREDSFLCNSMIKAYLDTRQ 57

Query: 249 FTQATTLYKFLLKNVEFNPDNYTFSSLAKCCALDLEFWGGLGVHNHALKSGFVSNLYVAT 428
           +  +  LY+ L K   F PDN+TF++L K C L +  + GL +H    +SGF +++YV+T
Sbjct: 58  YPDSFALYRDLRKETCFAPDNFTFTTLTKSCTLSMCVYQGLQLHGQIWRSGFCADMYVST 117

Query: 429 ALVDMYGKLGEMSSAKKAFDEMTERTSVSWTALVDGYVKIGDIDVAKRLFDLMPE-KDTA 605
            +VDMY K G+M  A+  FDEM +R+ VSWTAL+ GY + G++ VA +LFD MP+ KD  
Sbjct: 118 GVVDMYAKFGKMGCARNVFDEMPQRSEVSWTALICGYARCGELQVASKLFDEMPQVKDVV 177

Query: 606 AYNVMINAYVKLGQIGLARSLFEAMPERNVVSYTCMIDGYCCNCDLGEARLLFDTMPERN 785
             N M++ YVK G +  AR LF+ M ++ V+++T MI GYC N D+  AR LFD MP+RN
Sbjct: 178 ICNAMMDGYVKSGDMTSARRLFDEMTDKTVITWTTMIRGYCNNRDIESARELFDAMPQRN 237

Query: 786 LFSWNAMIGGYCQNKQPQ 839
           L SWN MIGGYCQNKQPQ
Sbjct: 238 LVSWNTMIGGYCQNKQPQ 255



 Score = 93.6 bits (231), Expect = 8e-17
 Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 40/181 (22%)
 Frame = +3

Query: 405 VSNLYVATALVDMYGKLGEMSSAKKAFDEMTERTSVSWTALVDGYVKIGDIDVAKRLFDL 584
           V ++ +  A++D Y K G+M+SA++ FDEMT++T ++WT ++ GY    DI+ A+ LFD 
Sbjct: 173 VKDVVICNAMMDGYVKSGDMTSARRLFDEMTDKTVITWTTMIRGYCNNRDIESARELFDA 232

Query: 585 MPEKDTAAYNVMINAYVKLGQIGLARSLFEAMP--------------------------- 683
           MP+++  ++N MI  Y +  Q   A  LF+ M                            
Sbjct: 233 MPQRNLVSWNTMIGGYCQNKQPQEAIRLFQEMQATTSLEPDDVTVVSVLPAISDTGALSL 292

Query: 684 -------------ERNVVSYTCMIDGYCCNCDLGEARLLFDTMPERNLFSWNAMIGGYCQ 824
                        ++ V   T ++D Y    ++ +AR +FD MPE+ + SWNAMI G   
Sbjct: 293 GEWCHHFVQRKKLDKMVKVCTAILDMYSKCGEIEKARKIFDEMPEKEVASWNAMIHGSAL 352

Query: 825 N 827
           N
Sbjct: 353 N 353



 Score = 78.6 bits (192), Expect = 3e-12
 Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 11/219 (5%)
 Frame = +3

Query: 153 ISYARRLFDLSPRKCDTFLCNTMIKSHLHARQFTQATTLYKFLLKNVEFNPDNYTFSSLA 332
           I  AR LFD  P++ +    NTMI  +   +Q  +A  L++ +       PD+ T  S+ 
Sbjct: 223 IESARELFDAMPQR-NLVSWNTMIGGYCQNKQPQEAIRLFQEMQATTSLEPDDVTVVSVL 281

Query: 333 KCC----ALDLEFWGGLGVHNHALKSGFVSNLYVATALVDMYGKLGEMSSAKKAFDEMTE 500
                  AL L  W     H+   +      + V TA++DMY K GE+  A+K FDEM E
Sbjct: 282 PAISDTGALSLGEW----CHHFVQRKKLDKMVKVCTAILDMYSKCGEIEKARKIFDEMPE 337

Query: 501 RTSVSWTALVDGYVKIGDIDVAKRLFDLMPEK---DTAAYNVMINAYVKLGQIGLARSLF 671
           +   SW A++ G    G+   A  LF  M ++   D      +++A    G +   R  F
Sbjct: 338 KEVASWNAMIHGSALNGNARAALDLFLAMLKEVKPDEVTMLAVLSACNHGGLVEKGRKWF 397

Query: 672 EAMPERNVVS----YTCMIDGYCCNCDLGEARLLFDTMP 776
             M E  +++    Y CM+D       L EA  +   MP
Sbjct: 398 RVMEEFGLIAKIEHYGCMVDLLGRAGHLKEAEDVITNMP 436


>ref|XP_003620999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124365545|gb|ABN09779.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355496014|gb|AES77217.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 601

 Score =  258 bits (658), Expect = 2e-66
 Identities = 132/286 (46%), Positives = 188/286 (65%), Gaps = 11/286 (3%)
 Frame = +3

Query: 3   KKCLFLLQQRNTRA--TLFQIHAFMIRNALETNINLLTKLIWTFAT--------GDPLAG 152
           +KC  +LQ   T+   TL +IHAF++RN+L  N++LLTK I +  +         D ++ 
Sbjct: 10  RKCFNILQSSKTKTFKTLLEIHAFILRNSLHNNLHLLTKFISSSTSLALSTPRRNDAVSI 69

Query: 153 ISYARRLFDLSP-RKCDTFLCNTMIKSHLHARQFTQATTLYKFLLKNVEFNPDNYTFSSL 329
           + +AR  F+ +P  KCD FLCNT+I +H   RQF    TLY    K+  F P +YTF+ +
Sbjct: 70  VQHARLFFNHTPPHKCDEFLCNTIINAHFSLRQFNHGFTLYNQFSKDCFFRPSSYTFTLI 129

Query: 330 AKCCALDLEFWGGLGVHNHALKSGFVSNLYVATALVDMYGKLGEMSSAKKAFDEMTERTS 509
            K C++      G  +H   LK+ F  +LYV T+LVDMY K G++  A+K FDEM+ R+ 
Sbjct: 130 LKGCSVSDAKRQGFQIHGVVLKNWFCLDLYVGTSLVDMYVKFGDVGFARKVFDEMSVRSL 189

Query: 510 VSWTALVDGYVKIGDIDVAKRLFDLMPEKDTAAYNVMINAYVKLGQIGLARSLFEAMPER 689
           VSWTA++ GY + GD+  A++LFD M ++D AA+NVMI+ YVK+G++ LAR LF+ M  +
Sbjct: 190 VSWTAVIVGYARCGDMVEARKLFDGMVDRDVAAFNVMIDGYVKMGRMDLARDLFDKMRVK 249

Query: 690 NVVSYTCMIDGYCCNCDLGEARLLFDTMPERNLFSWNAMIGGYCQN 827
           NV+S+T M+ GY  + D+ EAR LFD MPE+N+ SWNAMI GYCQN
Sbjct: 250 NVISWTSMVHGYSEDGDVDEARFLFDCMPEKNVLSWNAMIRGYCQN 295



 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 71/220 (32%), Positives = 100/220 (45%), Gaps = 12/220 (5%)
 Frame = +3

Query: 153 ISYARRLFDLSPRKCDTFLCNTMIKSHLHARQFTQATTLYKFLLKNVEFNPDNYTFSSL- 329
           +  AR LFD  P K +    N MI+ +    +   A  L+  +  NV+   +  T  S+ 
Sbjct: 267 VDEARFLFDCMPEK-NVLSWNAMIRGYCQNGRSHDALKLFCEMRGNVDVEMNEVTVVSVL 325

Query: 330 ---AKCCALDLEFWGGLGVHNHALKSGFVSNLYVATALVDMYGKLGEMSSAKKAFDEMTE 500
              A   ALDL  W    VH    ++    +++V  ALVDMY K GE+  AK  F+EMTE
Sbjct: 326 PAVADLSALDLGGW----VHGFVQRNQLDGSVHVCNALVDMYAKCGEIGKAKLVFEEMTE 381

Query: 501 RTSVSWTALVDGYVKIGDIDVAKRLFDLMP----EKDTAAYNVMINAYVKLGQIGLARSL 668
           + + SW AL++GY   G    A  +F +M     E +      +++A    G +   R  
Sbjct: 382 KDTGSWNALINGYGVNGCAKEALEVFAMMLREGFEPNQITMTSVLSACNHCGLVEEGRRC 441

Query: 669 FEAMPERNVV----SYTCMIDGYCCNCDLGEARLLFDTMP 776
           FEAM    +V     Y CMID       L EA  L   MP
Sbjct: 442 FEAMERFGIVPQIEHYGCMIDLLGRAGRLDEAEKLIQAMP 481