BLASTX nr result

ID: Rauwolfia21_contig00019373 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00019373
         (1016 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72415.1| hypothetical protein VITISV_027904 [Vitis vinifera]    63   8e-14
ref|XP_002515079.1| sensory transduction histidine kinase, putat...    52   1e-08
emb|CBI38716.3| unnamed protein product [Vitis vinifera]               63   2e-07
ref|XP_002266192.1| PREDICTED: two-component response regulator-...    63   2e-07

>emb|CAN72415.1| hypothetical protein VITISV_027904 [Vitis vinifera]
          Length = 991

 Score = 62.8 bits (151), Expect(2) = 8e-14
 Identities = 33/81 (40%), Positives = 44/81 (54%)
 Frame = +3

Query: 765  CNSVANNLGNTVSASICXXXXXXXXXXXXFRTTDLPERTGDDYFPPNNGKKGVVSSCTNQ 944
            CN V ++L ++V   IC               T  PE   D+    N+  KG+ S  + Q
Sbjct: 634  CNGVVSHLSSSVHGGICNRNDGNPTSNGAVVRTTAPESVNDEGLSNNDALKGMDSHHSTQ 693

Query: 945  REAALIKFRLKRKHRCYKKKV 1007
            REAAL+KFRLKRK RC++KKV
Sbjct: 694  REAALMKFRLKRKDRCFEKKV 714



 Score = 41.6 bits (96), Expect(2) = 8e-14
 Identities = 42/128 (32%), Positives = 60/128 (46%), Gaps = 16/128 (12%)
 Frame = +2

Query: 389 CCEREANASENH---FSNL-RTAFYTFWAHGAAFTNDQEKTASSEPGQSGESRAAFPPMG 556
           C E + +AS +H   F+ L  +   T    GAA +  Q    +   GQS ++ AAFP   
Sbjct: 468 CSELKEDASYSHERLFNQLPESTVGTSERCGAALSVTQGNMTTLVMGQSNQAGAAFPTSQ 527

Query: 557 LGFFTYPGEGLR----VVVVL*CFIP------NLSPVWSSKS--QHEQSPIPTASSIHST 700
           LG    P +G+R           F P       L P+WS KS  Q EQS   T+SS++  
Sbjct: 528 LGLI--PVQGVRFDSSXAGYGHXFPPIFHTQXGLPPIWSPKSAWQREQSHFSTSSSLYYN 585

Query: 701 SEVQNPER 724
            E+Q+ E+
Sbjct: 586 PEIQSLEQ 593


>ref|XP_002515079.1| sensory transduction histidine kinase, putative [Ricinus communis]
            gi|223545559|gb|EEF47063.1| sensory transduction
            histidine kinase, putative [Ricinus communis]
          Length = 697

 Score = 51.6 bits (122), Expect(2) = 1e-08
 Identities = 30/81 (37%), Positives = 41/81 (50%)
 Frame = +3

Query: 765  CNSVANNLGNTVSASICXXXXXXXXXXXXFRTTDLPERTGDDYFPPNNGKKGVVSSCTNQ 944
            CNS A++  ++   S                   +PE + D      +G +G+ S   +Q
Sbjct: 581  CNSFADHNNSSAYGSFSSRTHRNATFVAPTEKPTVPESSNDGGIVACDGFRGMDSDRFSQ 640

Query: 945  REAALIKFRLKRKHRCYKKKV 1007
            REAAL KFRLKRK RCY+KKV
Sbjct: 641  REAALTKFRLKRKDRCYEKKV 661



 Score = 35.0 bits (79), Expect(2) = 1e-08
 Identities = 19/47 (40%), Positives = 28/47 (59%)
 Frame = +2

Query: 617 IPNLSPVWSSKSQHEQSPIPTASSIHSTSEVQNPERGFCPHKQTGSA 757
           +P+ SP  +S  Q EQSP P ++SIHS  E+Q+ E       +T +A
Sbjct: 503 LPSSSPKLAS--QREQSPFPISTSIHSNPEIQDSEGNNRQSAETATA 547


>emb|CBI38716.3| unnamed protein product [Vitis vinifera]
          Length = 593

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 33/81 (40%), Positives = 44/81 (54%)
 Frame = +3

Query: 765  CNSVANNLGNTVSASICXXXXXXXXXXXXFRTTDLPERTGDDYFPPNNGKKGVVSSCTNQ 944
            CN V ++L ++V   IC               T  PE   D+    N+  KG+ S  + Q
Sbjct: 481  CNGVVSHLSSSVHGGICNRNDGNPTSNGAVVRTTAPESVNDEGLSNNDALKGMDSHHSTQ 540

Query: 945  REAALIKFRLKRKHRCYKKKV 1007
            REAAL+KFRLKRK RC++KKV
Sbjct: 541  REAALMKFRLKRKDRCFEKKV 561


>ref|XP_002266192.1| PREDICTED: two-component response regulator-like APRR5-like [Vitis
            vinifera]
          Length = 641

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 33/81 (40%), Positives = 44/81 (54%)
 Frame = +3

Query: 765  CNSVANNLGNTVSASICXXXXXXXXXXXXFRTTDLPERTGDDYFPPNNGKKGVVSSCTNQ 944
            CN V ++L ++V   IC               T  PE   D+    N+  KG+ S  + Q
Sbjct: 529  CNGVVSHLSSSVHGGICNRNDGNPTSNGAVVRTTAPESVNDEGLSNNDALKGMDSHHSTQ 588

Query: 945  REAALIKFRLKRKHRCYKKKV 1007
            REAAL+KFRLKRK RC++KKV
Sbjct: 589  REAALMKFRLKRKDRCFEKKV 609


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