BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00019253
         (2503 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001275266.1| bromodomain-containing RNA-binding protein 1...    81   5e-17
emb|CAD43286.1| bromodomain-containing RNA-binding protein 1 [Ni...    75   4e-15
emb|CAD43287.1| bromodomain-containing RNA-binding protein 2 [Ni...    72   3e-14
emb|CAD43284.1| bromodomain-containing RNA-binding protein 1 [Ni...    70   7e-14

>ref|NP_001275266.1| bromodomain-containing RNA-binding protein 1 [Solanum tuberosum]
            gi|57282314|emb|CAD43283.1| bromodomain-containing
            RNA-binding protein 1 [Solanum tuberosum]
          Length = 602

 Score = 80.9 bits (198), Expect(2) = 5e-17
 Identities = 75/211 (35%), Positives = 108/211 (51%), Gaps = 29/211 (13%)
 Frame = -3

Query: 1202 P*PKKKAEAISPHNQRHPLEENNSPAFMQTPVDDAYSFIPKPIKINRN--GFN------- 1050
            P PKKK +    H+  +    + SPA  QT  DDAYSF  +PI+   N  G N       
Sbjct: 41   PNPKKKQKQF--HHTSNGRHIDESPAVTQTASDDAYSFNQRPIESTTNVDGLNFGGYLTF 98

Query: 1049 HLVSWHTP------SRVF---KQICNFQDRIESGQFSNNAHNPESQGN*RNCVEIKDPSP 897
            ++VS++        SR+    +QI N +DRIESGQ S    NP SQG  +     K P+P
Sbjct: 99   NVVSYNKGEVNELRSRLLAEVEQIRNLKDRIESGQLSTT--NPRSQGKSKKLSGNKRPTP 156

Query: 896  ------PKRIF*WL*EWRYWKSRMSHG*----GFTRIFARARN**S-L*ETKTVRIFNVP 750
                  PK++   + E R + + +  G     G   +    R   + L + K   IFN+P
Sbjct: 157  SGSSKDPKKLPNGV-ENRNFGNPVGGGGVKAIGTESMMKECRQILAKLMKHKNGWIFNIP 215

Query: 749  MDAESGGLHIYHKIVKQPMDLEMIKSSCGKN 657
            +DAE+ GLH YH+I+K+P+DL  +KS+  KN
Sbjct: 216  VDAEALGLHDYHQIIKRPIDLGTVKSNLAKN 246



 Score = 36.2 bits (82), Expect(2) = 5e-17
 Identities = 17/25 (68%), Positives = 18/25 (72%)
 Frame = -1

Query: 646 HALLYIPKKDQFNGLAEMLLARFGD 572
           +ALLY PK DQ NG AE LL RF D
Sbjct: 264 NALLYNPKTDQVNGFAEQLLGRFED 288


>emb|CAD43286.1| bromodomain-containing RNA-binding protein 1 [Nicotiana tabacum]
          Length = 617

 Score = 74.7 bits (182), Expect(2) = 4e-15
 Identities = 67/211 (31%), Positives = 97/211 (45%), Gaps = 29/211 (13%)
 Frame = -3

Query: 1202 P*PKKKAEAISPHNQRHPLEENNSPAFMQTPVDDAYSFIPKPIKINRN------------ 1059
            P PKKK +    H+  +    + SPA  QT  DDAYSF  +PI+ + N            
Sbjct: 41   PNPKKKQKQF--HHASNGRHNDESPAVTQTASDDAYSFNQRPIESSTNVDGLNLGGYMTY 98

Query: 1058 ---GFNHLVSWHTPSRV---FKQICNFQDRIESGQFSNNAHNPESQGN*RNCVEIKDPSP 897
                +N        SR+    +QI N +DRIESGQ S +  NP S G  +     K P+P
Sbjct: 99   NVASYNKTELHELRSRLVAELEQIRNLKDRIESGQLSTS--NPRSHGKSKKLSGNKRPTP 156

Query: 896  P------KRIF*WL*EWRYWKSRMSHG*----GFTRIFARARN**S-L*ETKTVRIFNVP 750
                   K++   +    +       G     G   +    R   + L + K+  IFN P
Sbjct: 157  SGSSKDRKKLLNGVDNRNFGNPGGGGGVKGIIGMENMMKECRQVLAKLMKHKSGWIFNTP 216

Query: 749  MDAESGGLHIYHKIVKQPMDLEMIKSSCGKN 657
            +DA++ GLH YH+I+K+PMDL  +KS+   N
Sbjct: 217  VDAKAMGLHDYHQIIKRPMDLGTVKSNLINN 247



 Score = 35.8 bits (81), Expect(2) = 4e-15
 Identities = 17/25 (68%), Positives = 19/25 (76%)
 Frame = -1

Query: 646 HALLYIPKKDQFNGLAEMLLARFGD 572
           +ALLY PK DQ +G AE LLARF D
Sbjct: 265 NALLYNPKTDQVHGFAEQLLARFED 289


>emb|CAD43287.1| bromodomain-containing RNA-binding protein 2 [Nicotiana tabacum]
          Length = 616

 Score = 71.6 bits (174), Expect(2) = 3e-14
 Identities = 68/213 (31%), Positives = 96/213 (45%), Gaps = 31/213 (14%)
 Frame = -3

Query: 1202 P*PKKKAEAISPHNQRHPLEENNSPAFMQTPVDDAYSFIPKPIKINRN------------ 1059
            P PKKK +    H+  +    + SPA  QT  DDAYSF  +PI+ + N            
Sbjct: 41   PNPKKKQKQF--HHASNGRLTDESPAVTQTASDDAYSFNQRPIESSTNVDGLNLGGYMTY 98

Query: 1058 ---GFNHLVSWHTPSRV---FKQICNFQDRIESGQFSNNAHNPESQGN*RNCVEIKDPSP 897
                +N        SR+    +QI N +DRIESGQ S +  NP S G  +     K P+P
Sbjct: 99   NXASYNKTELHELRSRLVAELEQIRNLKDRIESGQLSTS--NPRSHGKSKKLSGNKRPTP 156

Query: 896  ------PKRIF*WL*EWRYWKSRMSHG*GFTRIFAR-------ARN**SL*ETKTVRIFN 756
                  PK++   +    +       G G   I  +        +    L + K+  IFN
Sbjct: 157  SGSSKDPKKLPNGVDNRNFGNPG---GGGVKGIIGKENMMKECTQVLGKLMKHKSGWIFN 213

Query: 755  VPMDAESGGLHIYHKIVKQPMDLEMIKSSCGKN 657
             P+DAE+ GLH YH+I+K+P DL   KS+   N
Sbjct: 214  TPVDAEALGLHDYHQIIKRPXDLGTXKSNLSNN 246



 Score = 35.8 bits (81), Expect(2) = 3e-14
 Identities = 17/25 (68%), Positives = 19/25 (76%)
 Frame = -1

Query: 646 HALLYIPKKDQFNGLAEMLLARFGD 572
           +ALLY PK DQ +G AE LLARF D
Sbjct: 264 NALLYNPKTDQVHGFAEQLLARFED 288


>emb|CAD43284.1| bromodomain-containing RNA-binding protein 1 [Nicotiana benthamiana]
          Length = 615

 Score = 70.5 bits (171), Expect(2) = 7e-14
 Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 28/206 (13%)
 Frame = -3

Query: 1202 P*PKKKAEAISPHNQRHPLEENNSPAFMQTPVDDAYSFIPKPIKINRN------------ 1059
            P PKKK +    H+  +  + + SPA  QT  DDAYSF  +PI+ + N            
Sbjct: 41   PKPKKKQKQF--HHASNGRQNDESPAVTQTASDDAYSFNQRPIESSTNVDGLNLGGYMTY 98

Query: 1058 ---GFNHLVSWHTPSRV---FKQICNFQDRIESGQFSNNAHNPESQGN*RNCVEIKDPSP 897
                +N        SR+    +QI + +DRIESGQ S +  NP S G  +     K  +P
Sbjct: 99   NVASYNKTELHELRSRLVAELEQIRSLKDRIESGQLSTS--NPRSHGKSKKLSGNKRATP 156

Query: 896  ------PKRIF*WL*EWRYWKSR---MSHG*GFTRIFARARN**S-L*ETKTVRIFNVPM 747
                  PK++   +    +       +    G   +    R     L + K+  IFN P+
Sbjct: 157  SGSSKDPKKLPNGVDNRNFGNPGGVGVKGIIGMENMMKECRQVLGKLMKHKSGWIFNTPV 216

Query: 746  DAESGGLHIYHKIVKQPMDLEMIKSS 669
            DAE+ GLH YH+I+K+PMDL  +KS+
Sbjct: 217  DAEALGLHDYHQIIKRPMDLGTVKSN 242



 Score = 35.8 bits (81), Expect(2) = 7e-14
 Identities = 17/25 (68%), Positives = 19/25 (76%)
 Frame = -1

Query: 646 HALLYIPKKDQFNGLAEMLLARFGD 572
           +ALLY PK DQ +G AE LLARF D
Sbjct: 264 NALLYNPKTDQVHGFAEQLLARFED 288