BLASTX nr result

ID: Rauwolfia21_contig00019029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00019029
         (403 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF36288.1| hypothetical protein [Ipomoea trifida]                 65   1e-08
gb|AAS79611.1| putative transposase En/Spm [Ipomoea trifida]           65   1e-08
gb|AAF69717.1|AC016041_22 F27J15.14 [Arabidopsis thaliana]             58   1e-06
emb|CAB86692.1| putative protein [Arabidopsis thaliana]                57   2e-06
gb|AAF79806.1|AC020646_29 T32E20.13 [Arabidopsis thaliana]             55   7e-06
gb|AAF06088.1|AC007918_12 Similar to gi|4263548 T6A13.8 putative...    55   7e-06

>dbj|BAF36288.1| hypothetical protein [Ipomoea trifida]
          Length = 456

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 5/134 (3%)
 Frame = -2

Query: 402 YRWDPIHDVAIYKAWSIRCARRMKGILCTVR-----KSNQRPEWIPDATHLQLCQYWQSD 238
           YRWDP+ +  + + +  + A+ +   L  VR     KS  +P WI D     L + W+SD
Sbjct: 193 YRWDPLEENIVRRIFEKKGAKLLTDHLREVRVRLADKSKAKPHWIADDVLDDLVRIWKSD 252

Query: 237 DFKKKSDTXXXXXXXXXXXXXXXXXXXGSISFQEHEKRLRKELGDSYKASDCWLRTHKIQ 58
           DFKK S+                    GSI   EH +RL+++LG     +D +  THK +
Sbjct: 253 DFKKVSEKNKSNRNSNSGGLGASLHSCGSIPMTEHHRRLKEKLGKDPSLADLYQHTHKRK 312

Query: 57  SGPKRGQFVDAPSE 16
           +G   G +V A ++
Sbjct: 313 NGD--GAYVCAKAQ 324


>gb|AAS79611.1| putative transposase En/Spm [Ipomoea trifida]
          Length = 395

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 5/134 (3%)
 Frame = -2

Query: 402 YRWDPIHDVAIYKAWSIRCARRMKGILCTVR-----KSNQRPEWIPDATHLQLCQYWQSD 238
           YRWDP+ +  + + +  + A+ +   L  VR     KS  +P WI D     L + W+SD
Sbjct: 132 YRWDPLEENIVRRIFEKKGAKLLTDHLREVRVRLADKSKAKPHWIADDVLDDLVRIWKSD 191

Query: 237 DFKKKSDTXXXXXXXXXXXXXXXXXXXGSISFQEHEKRLRKELGDSYKASDCWLRTHKIQ 58
           DFKK S+                    GSI   EH +RL+++LG     +D +  THK +
Sbjct: 192 DFKKVSEKNKSNRNSNSGGLGASLHSCGSIPMTEHHRRLKEKLGKDPSLADLYQHTHKRK 251

Query: 57  SGPKRGQFVDAPSE 16
           +G   G +V A ++
Sbjct: 252 NGD--GAYVCAKAQ 263


>gb|AAF69717.1|AC016041_22 F27J15.14 [Arabidopsis thaliana]
          Length = 1526

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 32/134 (23%), Positives = 60/134 (44%)
 Frame = -2

Query: 402  YRWDPIHDVAIYKAWSIRCARRMKGILCTVRKSNQRPEWIPDATHLQLCQYWQSDDFKKK 223
            + WDP+    +   ++  C RRMKG++ TVR S ++P+WI      ++  YW +++ +++
Sbjct: 1237 HHWDPLITGTVQFYFNEICLRRMKGMVSTVRTSRKKPKWIGKTLWKEMTAYWDTEEAQER 1296

Query: 222  SDTXXXXXXXXXXXXXXXXXXXGSISFQEHEKRLRKELGDSYKASDCWLRTHKIQSGPKR 43
            S                     GS S+ +    L  +LG +    D +++TH    G   
Sbjct: 1297 SQIYSNARMSDRNGLGPHIHFSGSKSYHQIRDELEDQLGKTVSIGDVFIKTHTKPDGTYV 1356

Query: 42   GQFVDAPSENYWAN 1
             +  +  +E Y  N
Sbjct: 1357 DRKAEKIAELYQKN 1370


>emb|CAB86692.1| putative protein [Arabidopsis thaliana]
          Length = 565

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/116 (25%), Positives = 53/116 (45%)
 Frame = -2

Query: 399 RWDPIHDVAIYKAWSIRCARRMKGILCTVRKSNQRPEWIPDATHLQLCQYWQSDDFKKKS 220
           RWDP+    +   ++  C RR+K ++ T R++ ++P WI +     +C YW ++  +K S
Sbjct: 276 RWDPLITGIVQYHFNQVCKRRLKDMVSTTRRTREQPPWIGETLWAVMCAYWDTEQAQKWS 335

Query: 219 DTXXXXXXXXXXXXXXXXXXXGSISFQEHEKRLRKELGDSYKASDCWLRTHKIQSG 52
            T                   G  SFQE + +L ++LG +      ++ TH    G
Sbjct: 336 QTYSKARLSDHNGLGPHIHFSGPKSFQEIQDQLEEKLGRTVTIGKVFVETHTKSDG 391


>gb|AAF79806.1|AC020646_29 T32E20.13 [Arabidopsis thaliana]
          Length = 1335

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 30/129 (23%), Positives = 56/129 (43%)
 Frame = -2

Query: 402  YRWDPIHDVAIYKAWSIRCARRMKGILCTVRKSNQRPEWIPDATHLQLCQYWQSDDFKKK 223
            + WDP+    +   ++  C RRMKG++ T R S  +P+WI       +  YW +++ +++
Sbjct: 1012 HHWDPLITWTVQFYFNEICLRRMKGMVSTARTSQNKPKWIGKTLWKTMTAYWDTEEAQER 1071

Query: 222  SDTXXXXXXXXXXXXXXXXXXXGSISFQEHEKRLRKELGDSYKASDCWLRTHKIQSGPKR 43
            S                      S S+ +    L ++LG +    D +++TH        
Sbjct: 1072 SQICSNARMSDRNGLGPHIPFSRSKSYHQIRDELEEQLGKTVNIGDVFIKTHT----KPD 1127

Query: 42   GQFVDAPSE 16
            G +VD  +E
Sbjct: 1128 GTYVDRKAE 1136


>gb|AAF06088.1|AC007918_12 Similar to gi|4263548 T6A13.8 putative En/Spm transposon protein
           homolog (mosaic protein) from Arabidopsis thaliana
           chromosome II sequence gb|AC006250 [Arabidopsis
           thaliana]
          Length = 497

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 30/129 (23%), Positives = 59/129 (45%)
 Frame = -2

Query: 402 YRWDPIHDVAIYKAWSIRCARRMKGILCTVRKSNQRPEWIPDATHLQLCQYWQSDDFKKK 223
           + WDP+    +   ++    RR+K ++ T R++ ++P WI +     +C YW +++ +K+
Sbjct: 208 HHWDPLITGTVQYYFNEIVKRRLKDMVSTARRTREQPPWIGETLWGTMCDYWDTEEAQKR 267

Query: 222 SDTXXXXXXXXXXXXXXXXXXXGSISFQEHEKRLRKELGDSYKASDCWLRTHKIQSGPKR 43
           S T                   G  SFQE +  L +++G      + +++TH        
Sbjct: 268 SKTYSKARLSDRNGLGPHVHYSGPKSFQEIQDELEEKMGRPVPLGEVFIQTHT----KSN 323

Query: 42  GQFVDAPSE 16
           G +VD  +E
Sbjct: 324 GTYVDQKAE 332


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