BLASTX nr result

ID: Rauwolfia21_contig00019023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00019023
         (452 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006467534.1| PREDICTED: cold-regulated 413 inner membrane...    65   1e-08
ref|XP_006467533.1| PREDICTED: cold-regulated 413 inner membrane...    65   1e-08
ref|XP_006449621.1| hypothetical protein CICLE_v10016585mg [Citr...    64   3e-08
ref|XP_004233008.1| PREDICTED: cold-regulated 413 inner membrane...    60   3e-07

>ref|XP_006467534.1| PREDICTED: cold-regulated 413 inner membrane protein 2,
           chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 202

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 36/67 (53%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
 Frame = -1

Query: 194 LTPQLKQ-NERPLASIFLGFKFNPLRVSVDC--IKGVMKKKGNGFGAVCYAAPLSPQNLQ 24
           LT Q K    R  +S +  F FNPLR+SV+   +K V K+K  GF AVCYAAPL+ +NLQ
Sbjct: 26  LTRQTKLFGSRSFSSSWSSFAFNPLRLSVNHEEMKMVTKRKSRGFSAVCYAAPLTARNLQ 85

Query: 23  WISTVST 3
           WIST+S+
Sbjct: 86  WISTISS 92


>ref|XP_006467533.1| PREDICTED: cold-regulated 413 inner membrane protein 2,
           chloroplastic-like isoform X1 [Citrus sinensis]
          Length = 224

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 36/67 (53%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
 Frame = -1

Query: 194 LTPQLKQ-NERPLASIFLGFKFNPLRVSVDC--IKGVMKKKGNGFGAVCYAAPLSPQNLQ 24
           LT Q K    R  +S +  F FNPLR+SV+   +K V K+K  GF AVCYAAPL+ +NLQ
Sbjct: 26  LTRQTKLFGSRSFSSSWSSFAFNPLRLSVNHEEMKMVTKRKSRGFSAVCYAAPLTARNLQ 85

Query: 23  WISTVST 3
           WIST+S+
Sbjct: 86  WISTISS 92


>ref|XP_006449621.1| hypothetical protein CICLE_v10016585mg [Citrus clementina]
           gi|557552232|gb|ESR62861.1| hypothetical protein
           CICLE_v10016585mg [Citrus clementina]
          Length = 224

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 37/67 (55%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
 Frame = -1

Query: 194 LTPQLKQ-NERPLASIFLGFKFNPLRVSVDC--IKGVMKKKGNGFGAVCYAAPLSPQNLQ 24
           LT Q K    R  +S    F FNPLR+SV+   +K V K+K  GF AVCYAAPL+ +NLQ
Sbjct: 26  LTRQTKLFGARSFSSSSSSFAFNPLRLSVNHEEMKMVTKRKSRGFSAVCYAAPLTARNLQ 85

Query: 23  WISTVST 3
           WISTVS+
Sbjct: 86  WISTVSS 92


>ref|XP_004233008.1| PREDICTED: cold-regulated 413 inner membrane protein 2,
           chloroplastic-like [Solanum lycopersicum]
          Length = 222

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 37/78 (47%), Positives = 51/78 (65%), Gaps = 6/78 (7%)
 Frame = -1

Query: 218 SYNGRLCCL-TPQ-----LKQNERPLASIFLGFKFNPLRVSVDCIKGVMKKKGNGFGAVC 57
           SYN +LC L +PQ     + Q++   +S FLG+  NPLRVS+D + G M  K  G G VC
Sbjct: 17  SYNKQLCALRSPQSHHTRISQHKLQQSSSFLGY--NPLRVSID-VSGEMNMKRRG-GVVC 72

Query: 56  YAAPLSPQNLQWISTVST 3
            AA L+P+NLQW+ T+S+
Sbjct: 73  SAAALTPRNLQWVCTISS 90


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