BLASTX nr result
ID: Rauwolfia21_contig00018234
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00018234
(409 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI24130.3| unnamed protein product [Vitis vinifera] 63 5e-09
ref|XP_002265730.2| PREDICTED: nuclear-pore anchor-like [Vitis v... 63 5e-09
ref|NP_001185436.1| nuclear pore anchor [Arabidopsis thaliana] g... 61 4e-08
ref|NP_001185435.1| nuclear pore anchor [Arabidopsis thaliana] g... 61 4e-08
ref|NP_178048.2| nuclear pore anchor [Arabidopsis thaliana] gi|3... 61 4e-08
gb|AAC17058.1| Contains similarity to Kinesin-like protein C gb|... 61 4e-08
ref|XP_006389901.1| hypothetical protein EUTSA_v10017995mg [Eutr... 61 9e-08
ref|XP_006301697.1| hypothetical protein CARUB_v10022154mg [Caps... 61 1e-07
gb|EOY14281.1| Nucleoprotein TPR, putative isoform 2 [Theobroma ... 55 6e-07
gb|EOY14280.1| Nucleoprotein TPR, putative isoform 1 [Theobroma ... 55 6e-07
ref|XP_004148306.1| PREDICTED: nuclear-pore anchor-like [Cucumis... 54 6e-07
ref|XP_004161392.1| PREDICTED: LOW QUALITY PROTEIN: nuclear-pore... 54 6e-07
ref|XP_004241008.1| PREDICTED: nuclear-pore anchor-like [Solanum... 55 9e-07
ref|XP_002312219.2| hypothetical protein POPTR_0008s08040g [Popu... 54 9e-07
ref|XP_006350691.1| PREDICTED: nuclear-pore anchor-like isoform ... 55 9e-07
dbj|BAO49712.1| nuclear pore complex protein TPRb [Nicotiana ben... 55 9e-07
ref|XP_006350692.1| PREDICTED: nuclear-pore anchor-like isoform ... 55 9e-07
ref|XP_006422313.1| hypothetical protein CICLE_v10006542mg [Citr... 53 2e-06
ref|XP_006493733.1| PREDICTED: nuclear-pore anchor-like [Citrus ... 53 2e-06
gb|EXB51220.1| Nuclear-pore anchor [Morus notabilis] 57 3e-06
>emb|CBI24130.3| unnamed protein product [Vitis vinifera]
Length = 2088
Score = 62.8 bits (151), Expect(2) = 5e-09
Identities = 30/35 (85%), Positives = 32/35 (91%)
Frame = -2
Query: 105 ETELHKSNRQLMEFLEQKDTEISEKNATIKSYLDK 1
E+ELHKS RQL+EFLE KD EISEKNATIKSYLDK
Sbjct: 116 ESELHKSKRQLLEFLEHKDLEISEKNATIKSYLDK 150
Score = 23.1 bits (48), Expect(2) = 5e-09
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 143 IGKDGEIERISGEK 102
I KDGEIER+S E+
Sbjct: 103 IEKDGEIERLSTEE 116
>ref|XP_002265730.2| PREDICTED: nuclear-pore anchor-like [Vitis vinifera]
Length = 2087
Score = 62.8 bits (151), Expect(2) = 5e-09
Identities = 30/35 (85%), Positives = 32/35 (91%)
Frame = -2
Query: 105 ETELHKSNRQLMEFLEQKDTEISEKNATIKSYLDK 1
E+ELHKS RQL+EFLE KD EISEKNATIKSYLDK
Sbjct: 116 ESELHKSKRQLLEFLEHKDLEISEKNATIKSYLDK 150
Score = 23.1 bits (48), Expect(2) = 5e-09
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 143 IGKDGEIERISGEK 102
I KDGEIER+S E+
Sbjct: 103 IEKDGEIERLSTEE 116
>ref|NP_001185436.1| nuclear pore anchor [Arabidopsis thaliana]
gi|332198107|gb|AEE36228.1| nuclear pore anchor
[Arabidopsis thaliana]
Length = 2115
Score = 60.8 bits (146), Expect(2) = 4e-08
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = -2
Query: 102 TELHKSNRQLMEFLEQKDTEISEKNATIKSYLDK 1
+ELHKS RQLME LEQKD EISEKN+TIKSYLDK
Sbjct: 118 SELHKSKRQLMELLEQKDAEISEKNSTIKSYLDK 151
Score = 21.9 bits (45), Expect(2) = 4e-08
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -3
Query: 143 IGKDGEIERISGE 105
I KDGE+ER+S E
Sbjct: 104 IEKDGEVERMSTE 116
>ref|NP_001185435.1| nuclear pore anchor [Arabidopsis thaliana]
gi|332198106|gb|AEE36227.1| nuclear pore anchor
[Arabidopsis thaliana]
Length = 2094
Score = 60.8 bits (146), Expect(2) = 4e-08
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = -2
Query: 102 TELHKSNRQLMEFLEQKDTEISEKNATIKSYLDK 1
+ELHKS RQLME LEQKD EISEKN+TIKSYLDK
Sbjct: 118 SELHKSKRQLMELLEQKDAEISEKNSTIKSYLDK 151
Score = 21.9 bits (45), Expect(2) = 4e-08
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -3
Query: 143 IGKDGEIERISGE 105
I KDGE+ER+S E
Sbjct: 104 IEKDGEVERMSTE 116
>ref|NP_178048.2| nuclear pore anchor [Arabidopsis thaliana]
gi|302425121|sp|A4GSN8.1|NUA_ARATH RecName:
Full=Nuclear-pore anchor; AltName: Full=Protein
TRANSLOCATED PROMOTER REGION; Short=AtTPR
gi|126594444|gb|ABO21684.1| nuclear-pore anchor
[Arabidopsis thaliana] gi|332198105|gb|AEE36226.1|
nuclear pore anchor [Arabidopsis thaliana]
Length = 2093
Score = 60.8 bits (146), Expect(2) = 4e-08
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = -2
Query: 102 TELHKSNRQLMEFLEQKDTEISEKNATIKSYLDK 1
+ELHKS RQLME LEQKD EISEKN+TIKSYLDK
Sbjct: 118 SELHKSKRQLMELLEQKDAEISEKNSTIKSYLDK 151
Score = 21.9 bits (45), Expect(2) = 4e-08
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -3
Query: 143 IGKDGEIERISGE 105
I KDGE+ER+S E
Sbjct: 104 IEKDGEVERMSTE 116
>gb|AAC17058.1| Contains similarity to Kinesin-like protein C gb|D21138 from A.
thaliana [Arabidopsis thaliana]
Length = 785
Score = 60.8 bits (146), Expect(2) = 4e-08
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = -2
Query: 102 TELHKSNRQLMEFLEQKDTEISEKNATIKSYLDK 1
+ELHKS RQLME LEQKD EISEKN+TIKSYLDK
Sbjct: 123 SELHKSKRQLMELLEQKDAEISEKNSTIKSYLDK 156
Score = 21.9 bits (45), Expect(2) = 4e-08
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -3
Query: 143 IGKDGEIERISGE 105
I KDGE+ER+S E
Sbjct: 109 IEKDGEVERMSTE 121
>ref|XP_006389901.1| hypothetical protein EUTSA_v10017995mg [Eutrema salsugineum]
gi|557086335|gb|ESQ27187.1| hypothetical protein
EUTSA_v10017995mg [Eutrema salsugineum]
Length = 2077
Score = 60.8 bits (146), Expect(2) = 9e-08
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = -2
Query: 102 TELHKSNRQLMEFLEQKDTEISEKNATIKSYLDK 1
+ELHKS RQLME LEQKD EISEKN+TIKSYLDK
Sbjct: 118 SELHKSKRQLMELLEQKDAEISEKNSTIKSYLDK 151
Score = 20.8 bits (42), Expect(2) = 9e-08
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -3
Query: 143 IGKDGEIERISGE 105
I KDGE+ER++ E
Sbjct: 104 IEKDGEVERMTTE 116
>ref|XP_006301697.1| hypothetical protein CARUB_v10022154mg [Capsella rubella]
gi|482570407|gb|EOA34595.1| hypothetical protein
CARUB_v10022154mg [Capsella rubella]
Length = 2115
Score = 60.8 bits (146), Expect(2) = 1e-07
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = -2
Query: 102 TELHKSNRQLMEFLEQKDTEISEKNATIKSYLDK 1
+ELHKS RQLME LEQKD EISEKN+TIKSYLDK
Sbjct: 118 SELHKSKRQLMELLEQKDAEISEKNSTIKSYLDK 151
Score = 20.4 bits (41), Expect(2) = 1e-07
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -3
Query: 143 IGKDGEIERIS 111
I KDGE+ER++
Sbjct: 104 IEKDGEVERVT 114
>gb|EOY14281.1| Nucleoprotein TPR, putative isoform 2 [Theobroma cacao]
Length = 2091
Score = 55.1 bits (131), Expect(2) = 6e-07
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = -2
Query: 102 TELHKSNRQLMEFLEQKDTEISEKNATIKSYLDK 1
+ELHKS RQL+E +EQKD+EI++KNA IK+YLDK
Sbjct: 117 SELHKSRRQLLEMIEQKDSEIADKNAVIKTYLDK 150
Score = 23.9 bits (50), Expect(2) = 6e-07
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -3
Query: 143 IGKDGEIERISGE 105
IGKDGEIER++ E
Sbjct: 103 IGKDGEIERLTIE 115
>gb|EOY14280.1| Nucleoprotein TPR, putative isoform 1 [Theobroma cacao]
Length = 2090
Score = 55.1 bits (131), Expect(2) = 6e-07
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = -2
Query: 102 TELHKSNRQLMEFLEQKDTEISEKNATIKSYLDK 1
+ELHKS RQL+E +EQKD+EI++KNA IK+YLDK
Sbjct: 117 SELHKSRRQLLEMIEQKDSEIADKNAVIKTYLDK 150
Score = 23.9 bits (50), Expect(2) = 6e-07
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -3
Query: 143 IGKDGEIERISGE 105
IGKDGEIER++ E
Sbjct: 103 IGKDGEIERLTIE 115
>ref|XP_004148306.1| PREDICTED: nuclear-pore anchor-like [Cucumis sativus]
Length = 2079
Score = 54.3 bits (129), Expect(2) = 6e-07
Identities = 25/34 (73%), Positives = 29/34 (85%)
Frame = -2
Query: 102 TELHKSNRQLMEFLEQKDTEISEKNATIKSYLDK 1
+ELHKS RQLME +E KD EI EK++TIKSYLDK
Sbjct: 118 SELHKSKRQLMELIEHKDLEIGEKDSTIKSYLDK 151
Score = 24.6 bits (52), Expect(2) = 6e-07
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -3
Query: 143 IGKDGEIERISGE 105
IGKDGEIER++ E
Sbjct: 104 IGKDGEIERLNTE 116
>ref|XP_004161392.1| PREDICTED: LOW QUALITY PROTEIN: nuclear-pore anchor-like [Cucumis
sativus]
Length = 1827
Score = 54.3 bits (129), Expect(2) = 6e-07
Identities = 25/34 (73%), Positives = 29/34 (85%)
Frame = -2
Query: 102 TELHKSNRQLMEFLEQKDTEISEKNATIKSYLDK 1
+ELHKS RQLME +E KD EI EK++TIKSYLDK
Sbjct: 118 SELHKSKRQLMELIEHKDLEIGEKDSTIKSYLDK 151
Score = 24.6 bits (52), Expect(2) = 6e-07
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -3
Query: 143 IGKDGEIERISGE 105
IGKDGEIER++ E
Sbjct: 104 IGKDGEIERLNTE 116
>ref|XP_004241008.1| PREDICTED: nuclear-pore anchor-like [Solanum lycopersicum]
Length = 2053
Score = 55.1 bits (131), Expect(2) = 9e-07
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = -2
Query: 102 TELHKSNRQLMEFLEQKDTEISEKNATIKSYLDK 1
+EL K+ RQLME +EQKD EISEKN+TIKSYLDK
Sbjct: 117 SELRKTKRQLMELVEQKDLEISEKNSTIKSYLDK 150
Score = 23.1 bits (48), Expect(2) = 9e-07
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -3
Query: 143 IGKDGEIERISGE 105
IGKDG+++R+S E
Sbjct: 103 IGKDGDVDRLSTE 115
>ref|XP_002312219.2| hypothetical protein POPTR_0008s08040g [Populus trichocarpa]
gi|550332646|gb|EEE89586.2| hypothetical protein
POPTR_0008s08040g [Populus trichocarpa]
Length = 2052
Score = 53.9 bits (128), Expect(2) = 9e-07
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = -2
Query: 102 TELHKSNRQLMEFLEQKDTEISEKNATIKSYLDK 1
+ELHKS RQL+E +EQKD EISEKNAT YLDK
Sbjct: 117 SELHKSKRQLIELVEQKDLEISEKNATFNGYLDK 150
Score = 24.3 bits (51), Expect(2) = 9e-07
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -3
Query: 143 IGKDGEIERISGE 105
IGKDGEIER++ E
Sbjct: 103 IGKDGEIERLTME 115
>ref|XP_006350691.1| PREDICTED: nuclear-pore anchor-like isoform X1 [Solanum tuberosum]
Length = 2049
Score = 55.1 bits (131), Expect(2) = 9e-07
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = -2
Query: 102 TELHKSNRQLMEFLEQKDTEISEKNATIKSYLDK 1
+EL K+ RQLME +EQKD EISEKN+TIKSYLDK
Sbjct: 117 SELRKTKRQLMELVEQKDLEISEKNSTIKSYLDK 150
Score = 23.1 bits (48), Expect(2) = 9e-07
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -3
Query: 143 IGKDGEIERISGE 105
IGKDG+++R+S E
Sbjct: 103 IGKDGDVDRLSTE 115
>dbj|BAO49712.1| nuclear pore complex protein TPRb [Nicotiana benthamiana]
Length = 2041
Score = 55.1 bits (131), Expect(2) = 9e-07
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = -2
Query: 102 TELHKSNRQLMEFLEQKDTEISEKNATIKSYLDK 1
+EL K+ RQLME +EQKD EISEKN+TIKSYLDK
Sbjct: 117 SELRKTKRQLMELVEQKDLEISEKNSTIKSYLDK 150
Score = 23.1 bits (48), Expect(2) = 9e-07
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -3
Query: 143 IGKDGEIERISGE 105
IGKDG+++R+S E
Sbjct: 103 IGKDGDVDRLSTE 115
>ref|XP_006350692.1| PREDICTED: nuclear-pore anchor-like isoform X2 [Solanum tuberosum]
Length = 2022
Score = 55.1 bits (131), Expect(2) = 9e-07
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = -2
Query: 102 TELHKSNRQLMEFLEQKDTEISEKNATIKSYLDK 1
+EL K+ RQLME +EQKD EISEKN+TIKSYLDK
Sbjct: 117 SELRKTKRQLMELVEQKDLEISEKNSTIKSYLDK 150
Score = 23.1 bits (48), Expect(2) = 9e-07
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -3
Query: 143 IGKDGEIERISGE 105
IGKDG+++R+S E
Sbjct: 103 IGKDGDVDRLSTE 115
>ref|XP_006422313.1| hypothetical protein CICLE_v10006542mg [Citrus clementina]
gi|557524186|gb|ESR35553.1| hypothetical protein
CICLE_v10006542mg [Citrus clementina]
Length = 2070
Score = 52.8 bits (125), Expect(2) = 2e-06
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = -2
Query: 99 ELHKSNRQLMEFLEQKDTEISEKNATIKSYLDK 1
ELHKS RQLME +EQKD + SEK ATIK+YLDK
Sbjct: 118 ELHKSRRQLMELVEQKDLQHSEKGATIKAYLDK 150
Score = 24.3 bits (51), Expect(2) = 2e-06
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -3
Query: 143 IGKDGEIERISGE 105
IGKDGEIER++ E
Sbjct: 103 IGKDGEIERLTME 115
>ref|XP_006493733.1| PREDICTED: nuclear-pore anchor-like [Citrus sinensis]
Length = 2058
Score = 52.8 bits (125), Expect(2) = 2e-06
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = -2
Query: 99 ELHKSNRQLMEFLEQKDTEISEKNATIKSYLDK 1
ELHKS RQLME +EQKD + SEK ATIK+YLDK
Sbjct: 118 ELHKSRRQLMELVEQKDLQHSEKGATIKAYLDK 150
Score = 24.3 bits (51), Expect(2) = 2e-06
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -3
Query: 143 IGKDGEIERISGE 105
IGKDGEIER++ E
Sbjct: 103 IGKDGEIERLTME 115
>gb|EXB51220.1| Nuclear-pore anchor [Morus notabilis]
Length = 2083
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = -2
Query: 102 TELHKSNRQLMEFLEQKDTEISEKNATIKSYLDK 1
+E HKS RQL+E +EQKD+EISEKN TIKSYLDK
Sbjct: 117 SEFHKSKRQLLELVEQKDSEISEKNLTIKSYLDK 150