BLASTX nr result

ID: Rauwolfia21_contig00018178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00018178
         (217 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006342120.1| PREDICTED: pentatricopeptide repeat-containi...    59   9e-07
ref|XP_006342119.1| PREDICTED: pentatricopeptide repeat-containi...    59   9e-07
ref|XP_006342118.1| PREDICTED: pentatricopeptide repeat-containi...    59   9e-07

>ref|XP_006342120.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g76280-like isoform X3 [Solanum tuberosum]
          Length = 683

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/55 (50%), Positives = 36/55 (65%)
 Frame = +2

Query: 53  NVDMESQAICRVTTNVPPQVVHMPAMKVLRWSFNDVIHTCANMGNYVLAEQLMSQ 217
           N DME Q++  + TN   + +    MK+LRWSFNDV+H CA + N  LAEQLM Q
Sbjct: 178 NFDMERQSLGSMETNTARKTLSASVMKLLRWSFNDVMHACAQVQNCDLAEQLMLQ 232


>ref|XP_006342119.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g76280-like isoform X2 [Solanum tuberosum]
          Length = 770

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/55 (50%), Positives = 36/55 (65%)
 Frame = +2

Query: 53  NVDMESQAICRVTTNVPPQVVHMPAMKVLRWSFNDVIHTCANMGNYVLAEQLMSQ 217
           N DME Q++  + TN   + +    MK+LRWSFNDV+H CA + N  LAEQLM Q
Sbjct: 265 NFDMERQSLGSMETNTARKTLSASVMKLLRWSFNDVMHACAQVQNCDLAEQLMLQ 319


>ref|XP_006342118.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g76280-like isoform X1 [Solanum tuberosum]
          Length = 806

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/55 (50%), Positives = 36/55 (65%)
 Frame = +2

Query: 53  NVDMESQAICRVTTNVPPQVVHMPAMKVLRWSFNDVIHTCANMGNYVLAEQLMSQ 217
           N DME Q++  + TN   + +    MK+LRWSFNDV+H CA + N  LAEQLM Q
Sbjct: 301 NFDMERQSLGSMETNTARKTLSASVMKLLRWSFNDVMHACAQVQNCDLAEQLMLQ 355


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