BLASTX nr result
ID: Rauwolfia21_contig00018172
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00018172
(1552 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI39646.3| unnamed protein product [Vitis vinifera] 86 4e-14
ref|XP_004302306.1| PREDICTED: zinc finger CCCH domain-containin... 81 1e-12
ref|XP_002318931.1| hypothetical protein POPTR_0013s00620g [Popu... 81 1e-12
ref|XP_004302307.1| PREDICTED: zinc finger CCCH domain-containin... 79 7e-12
gb|EMJ07490.1| hypothetical protein PRUPE_ppa016420mg [Prunus pe... 75 6e-11
ref|XP_004135569.1| PREDICTED: zinc finger CCCH domain-containin... 72 5e-10
ref|XP_006428241.1| hypothetical protein CICLE_v10012993mg [Citr... 71 1e-09
ref|XP_004967856.1| PREDICTED: zinc finger CCCH domain-containin... 69 7e-09
gb|EOY11730.1| C2H2 and C2HC zinc fingers superfamily protein, p... 68 9e-09
sp|Q0JP11.2|C3H3_ORYSJ RecName: Full=Zinc finger CCCH domain-con... 67 2e-08
ref|XP_006344809.1| PREDICTED: zinc finger CCCH domain-containin... 66 5e-08
ref|XP_002455379.1| hypothetical protein SORBIDRAFT_03g009590 [S... 64 2e-07
ref|XP_004230342.1| PREDICTED: zinc finger CCCH domain-containin... 64 2e-07
ref|XP_003591237.1| Zinc finger matrin type 5 [Medicago truncatu... 61 1e-06
gb|AFW79695.1| hypothetical protein ZEAMMB73_397300 [Zea mays] 60 3e-06
>emb|CBI39646.3| unnamed protein product [Vitis vinifera]
Length = 152
Score = 85.9 bits (211), Expect = 4e-14
Identities = 35/55 (63%), Positives = 43/55 (78%)
Frame = -1
Query: 442 DVQSQSLPGRQILESASLPGNVLSDNIGTSWGNLPPSLWPPPESGYPPQPFIDWG 278
++QS S PG Q++ LPGNV+ D++G SWGNLPPSL PPPE GYPP PF+DWG
Sbjct: 98 NIQSLSNPGNQLVGGGPLPGNVVKDSMGNSWGNLPPSLKPPPEGGYPPLPFLDWG 152
>ref|XP_004302306.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
isoform 1 [Fragaria vesca subsp. vesca]
Length = 150
Score = 81.3 bits (199), Expect = 1e-12
Identities = 33/53 (62%), Positives = 41/53 (77%)
Frame = -1
Query: 436 QSQSLPGRQILESASLPGNVLSDNIGTSWGNLPPSLWPPPESGYPPQPFIDWG 278
QS ++ G Q++ +SLP V+ DN+G SWGNLPPSL PPPE GYPP PF+DWG
Sbjct: 98 QSSTIQGNQMVAGSSLPDVVVRDNMGMSWGNLPPSLMPPPEGGYPPLPFVDWG 150
>ref|XP_002318931.1| hypothetical protein POPTR_0013s00620g [Populus trichocarpa]
gi|222857307|gb|EEE94854.1| hypothetical protein
POPTR_0013s00620g [Populus trichocarpa]
Length = 150
Score = 80.9 bits (198), Expect = 1e-12
Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Frame = -1
Query: 457 GINFTD-VQSQSLPGRQILESASLPGNVLSDNIGTSWGNLPPSLWPPPESGYPPQPFIDW 281
G F D VQS ++PG Q+ +S PG + +++G SWGNLPPSL PPPE GYPP PF+DW
Sbjct: 90 GTAFKDNVQSPTMPGNQLAGGSSFPGVAVRESMGMSWGNLPPSLKPPPEGGYPPLPFVDW 149
Query: 280 G 278
G
Sbjct: 150 G 150
>ref|XP_004302307.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
isoform 2 [Fragaria vesca subsp. vesca]
Length = 138
Score = 78.6 bits (192), Expect = 7e-12
Identities = 32/52 (61%), Positives = 39/52 (75%)
Frame = -1
Query: 433 SQSLPGRQILESASLPGNVLSDNIGTSWGNLPPSLWPPPESGYPPQPFIDWG 278
+Q G Q++ +SLP V+ DN+G SWGNLPPSL PPPE GYPP PF+DWG
Sbjct: 87 TQGASGNQMVAGSSLPDVVVRDNMGMSWGNLPPSLMPPPEGGYPPLPFVDWG 138
>gb|EMJ07490.1| hypothetical protein PRUPE_ppa016420mg [Prunus persica]
Length = 150
Score = 75.5 bits (184), Expect = 6e-11
Identities = 31/53 (58%), Positives = 39/53 (73%)
Frame = -1
Query: 436 QSQSLPGRQILESASLPGNVLSDNIGTSWGNLPPSLWPPPESGYPPQPFIDWG 278
QS + Q++ +SLP V+ D++G SWGNLPPSL PPPE GYPP PF+DWG
Sbjct: 98 QSSTFQENQLVGGSSLPDVVVRDSMGMSWGNLPPSLMPPPEGGYPPLPFVDWG 150
>ref|XP_004135569.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Cucumis sativus] gi|449508616|ref|XP_004163363.1|
PREDICTED: zinc finger CCCH domain-containing protein
3-like [Cucumis sativus]
Length = 156
Score = 72.4 bits (176), Expect = 5e-10
Identities = 29/54 (53%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
Frame = -1
Query: 436 QSQSLPGRQILE-SASLPGNVLSDNIGTSWGNLPPSLWPPPESGYPPQPFIDWG 278
Q ++P + ++ ++S G+++SD +GTSWGNLPPSL PPP+ GYPP PF+DWG
Sbjct: 103 QPPNVPVNRFVDGNSSSTGSLISDRLGTSWGNLPPSLMPPPDGGYPPLPFVDWG 156
>ref|XP_006428241.1| hypothetical protein CICLE_v10012993mg [Citrus clementina]
gi|568853265|ref|XP_006480284.1| PREDICTED: zinc finger
CCCH domain-containing protein 3-like isoform X1 [Citrus
sinensis] gi|568853267|ref|XP_006480285.1| PREDICTED:
zinc finger CCCH domain-containing protein 3-like
isoform X2 [Citrus sinensis]
gi|568853269|ref|XP_006480286.1| PREDICTED: zinc finger
CCCH domain-containing protein 3-like isoform X3 [Citrus
sinensis] gi|568853271|ref|XP_006480287.1| PREDICTED:
zinc finger CCCH domain-containing protein 3-like
isoform X4 [Citrus sinensis] gi|557530298|gb|ESR41481.1|
hypothetical protein CICLE_v10012993mg [Citrus
clementina]
Length = 155
Score = 70.9 bits (172), Expect = 1e-09
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
Frame = -1
Query: 448 FTDVQSQSLPGRQ---ILESASLPGNVLSDNIGTSWGNLPPSLWPPPESGYPPQPFIDWG 278
FTD+ ++S Q + +S PG+++ D++G SWGNLPPSL PPPE GYP PF+DWG
Sbjct: 96 FTDINARSSSVDQRIYLAGGSSFPGDMMRDSMGMSWGNLPPSLKPPPEGGYPLLPFVDWG 155
>ref|XP_004967856.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Setaria italica]
Length = 164
Score = 68.6 bits (166), Expect = 7e-09
Identities = 32/54 (59%), Positives = 36/54 (66%)
Frame = -1
Query: 439 VQSQSLPGRQILESASLPGNVLSDNIGTSWGNLPPSLWPPPESGYPPQPFIDWG 278
V +L G Q E S GNVL + +SWGNLPPSL PPPE GYPP PF+DWG
Sbjct: 113 VSQPNLVGYQAAERNSFSGNVLGAH--SSWGNLPPSLQPPPEGGYPPLPFVDWG 164
>gb|EOY11730.1| C2H2 and C2HC zinc fingers superfamily protein, putative [Theobroma
cacao]
Length = 133
Score = 68.2 bits (165), Expect = 9e-09
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = -1
Query: 400 SASLPGNVLSDNIGTSWGNLPPSLWPPPESGYPPQPFIDWG 278
+A PG+V IG SWGNLPPSL PPPE GYPP PF+DWG
Sbjct: 93 AAPAPGSVEGAGIGMSWGNLPPSLKPPPEGGYPPLPFVDWG 133
>sp|Q0JP11.2|C3H3_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 3;
Short=OsC3H3 gi|215701065|dbj|BAG92489.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218187901|gb|EEC70328.1| hypothetical protein
OsI_01197 [Oryza sativa Indica Group]
gi|222618113|gb|EEE54245.1| hypothetical protein
OsJ_01120 [Oryza sativa Japonica Group]
Length = 167
Score = 67.4 bits (163), Expect = 2e-08
Identities = 29/47 (61%), Positives = 34/47 (72%)
Frame = -1
Query: 418 GRQILESASLPGNVLSDNIGTSWGNLPPSLWPPPESGYPPQPFIDWG 278
G Q + +S GN+L + TSWGNLPPSL PPPE GYPP PF+DWG
Sbjct: 123 GYQAADGSSFSGNILGGH--TSWGNLPPSLRPPPEGGYPPFPFVDWG 167
>ref|XP_006344809.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
isoform X1 [Solanum tuberosum]
gi|565355893|ref|XP_006344810.1| PREDICTED: zinc finger
CCCH domain-containing protein 3-like isoform X2
[Solanum tuberosum]
Length = 150
Score = 65.9 bits (159), Expect = 5e-08
Identities = 27/41 (65%), Positives = 31/41 (75%)
Frame = -1
Query: 400 SASLPGNVLSDNIGTSWGNLPPSLWPPPESGYPPQPFIDWG 278
SAS PG+V + G S GNLPPSL PPPE GYPP PF++WG
Sbjct: 110 SASFPGDVFREKAGASLGNLPPSLRPPPEGGYPPLPFVEWG 150
>ref|XP_002455379.1| hypothetical protein SORBIDRAFT_03g009590 [Sorghum bicolor]
gi|241927354|gb|EES00499.1| hypothetical protein
SORBIDRAFT_03g009590 [Sorghum bicolor]
Length = 164
Score = 63.9 bits (154), Expect = 2e-07
Identities = 29/47 (61%), Positives = 33/47 (70%)
Frame = -1
Query: 418 GRQILESASLPGNVLSDNIGTSWGNLPPSLWPPPESGYPPQPFIDWG 278
G Q + S GN+L + T+WGNLPPSL PPPE GYPP PFIDWG
Sbjct: 120 GYQGPDRNSFSGNILGGH--TAWGNLPPSLQPPPEGGYPPLPFIDWG 164
>ref|XP_004230342.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Solanum lycopersicum]
Length = 150
Score = 63.5 bits (153), Expect = 2e-07
Identities = 26/41 (63%), Positives = 30/41 (73%)
Frame = -1
Query: 400 SASLPGNVLSDNIGTSWGNLPPSLWPPPESGYPPQPFIDWG 278
SAS PG+V + G S NLPPSL PPPE GYPP PF++WG
Sbjct: 110 SASFPGDVFREKAGASLSNLPPSLRPPPEGGYPPLPFVEWG 150
>ref|XP_003591237.1| Zinc finger matrin type 5 [Medicago truncatula]
gi|355480285|gb|AES61488.1| Zinc finger matrin type 5
[Medicago truncatula] gi|388501098|gb|AFK38615.1|
unknown [Medicago truncatula]
Length = 122
Score = 61.2 bits (147), Expect = 1e-06
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = -1
Query: 388 PGNVLSDNIGTSWGNLPPSLWPPPESGYPPQPFIDWG 278
PGN++ D +G S+GNLPPSL PPPE GY PF+DWG
Sbjct: 86 PGNIVGDTMGVSFGNLPPSLQPPPEVGYSNLPFLDWG 122
>gb|AFW79695.1| hypothetical protein ZEAMMB73_397300 [Zea mays]
Length = 166
Score = 59.7 bits (143), Expect = 3e-06
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = -1
Query: 394 SLPGNVLSDNIGTSWGNLPPSLWPPPESGYPPQPFIDWG 278
S G +L + SWGNLPPSL PPPE GYPP PFIDWG
Sbjct: 130 SSSGKILGGH--ASWGNLPPSLQPPPEGGYPPLPFIDWG 166