BLASTX nr result
ID: Rauwolfia21_contig00016424
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00016424
(888 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_173426.1| hypothetical protein NitaMp085 [Nicotiana tabac... 148 2e-33
ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncat... 120 5e-25
emb|CBI23503.3| unnamed protein product [Vitis vinifera] 72 6e-19
gb|EOY31163.1| Uncharacterized protein TCM_038148 [Theobroma cacao] 92 3e-16
sp|P15688.2|NU2M_BETVU RecName: Full=NADH-ubiquinone oxidoreduct... 91 6e-16
emb|CAA34729.1| unnamed protein product [Beta vulgaris subsp. vu... 91 6e-16
ref|XP_004153848.1| PREDICTED: LOW QUALITY PROTEIN: NADH-ubiquin... 74 5e-11
ref|YP_588306.1| hypothetical protein ZeamMp044 [Zea mays subsp.... 63 1e-09
ref|XP_002534065.1| conserved hypothetical protein [Ricinus comm... 66 2e-08
ref|XP_006401945.1| hypothetical protein EUTSA_v10015951mg, part... 59 2e-08
gb|AEZ03709.1| hypothetical protein (mitochondrion) [Oryza sativ... 60 8e-07
ref|YP_173425.1| hypothetical protein NitaMp084 [Nicotiana tabac... 59 3e-06
>ref|YP_173426.1| hypothetical protein NitaMp085 [Nicotiana tabacum]
gi|56806590|dbj|BAD83491.1| hypothetical protein
(mitochondrion) [Nicotiana tabacum]
Length = 162
Score = 148 bits (374), Expect = 2e-33
Identities = 74/84 (88%), Positives = 76/84 (90%)
Frame = +1
Query: 472 LPALSNKTGSARESAGNNRKEGVHVAAAPAPFLVNGAQQVRHLLQKRESTSDNHASARQR 651
LP + +GSARESAGNNRKEGVHVAA APFLVNGAQQVRHLLQKRESTSDNH SARQR
Sbjct: 79 LPFIIKNSGSARESAGNNRKEGVHVAAVSAPFLVNGAQQVRHLLQKRESTSDNHVSARQR 138
Query: 652 VEWPRADLFGYIIQVESRVTGTAV 723
VEWPRADLFGYIIQVESRVTG AV
Sbjct: 139 VEWPRADLFGYIIQVESRVTGKAV 162
Score = 70.9 bits (172), Expect = 6e-10
Identities = 49/100 (49%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Frame = +2
Query: 239 MLPPTIKGKARRREGDAAGEGKGXXXXXXXXXXIEKAED-GLGCVLSEGNTLF*PPWYEI 415
ML PTIKGKARRREG AAGEGK + G +G F I
Sbjct: 1 MLSPTIKGKARRREGGAAGEGKRFRRSRFFFHRKRRRPRMAYGASYLKGTRFFDRRGM-I 59
Query: 416 AGPSPPSARWPIGIAAFGLCLPFLIKPARPGKALATTERK 535
AGPSP SA PIGIAAFGLCLPF+IK + + A RK
Sbjct: 60 AGPSPRSAL-PIGIAAFGLCLPFIIKNSGSARESAGNNRK 98
>ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncatula]
gi|355477400|gb|AES58603.1| NADH dehydrogenase subunit
[Medicago truncatula]
Length = 1094
Score = 120 bits (302), Expect = 5e-25
Identities = 77/153 (50%), Positives = 86/153 (56%), Gaps = 7/153 (4%)
Frame = +3
Query: 180 THPLFMTKAGKNARQVQIRECFPQPLKERLDEGREMRRGKEKAFGDRDFLSFSSRRPRMA 359
T P + KAGKNARQVQIRECFPQPLKERLDEGREMRRGKE AFGDR F + S + + A
Sbjct: 330 TPPPHLNKAGKNARQVQIRECFPQPLKERLDEGREMRRGKENAFGDRYFFIYLSSKTKKA 389
Query: 360 *GASYL---KGTRFFDRRGMRXXXXXXXXXXXXXXXQPSGFA----CPF**NRLGPGKRW 518
+G F R +P G A CP LGPGKRW
Sbjct: 390 EDGLRCVLSEGNTLFRPR------WYDLGPSPRSARRPLGIAAFVACPL---YLGPGKRW 440
Query: 519 QQQKGRGPCSCCARPLLSQWGTAGSASTTKERI 617
QQQKGRGPCS A L+ G AGS++ RI
Sbjct: 441 QQQKGRGPCSASAPFLVD--GAAGSSTFFSSRI 471
Score = 105 bits (261), Expect = 3e-20
Identities = 77/182 (42%), Positives = 87/182 (47%)
Frame = +2
Query: 341 EKAEDGLGCVLSEGNTLF*PPWYEIAGPSPPSARWPIGIAAFGLCLPFLIKPARPGKALA 520
+KAEDGL CVLSEGNTLF P WY++ GPSP SAR P+GIAAF C +L PGK
Sbjct: 387 KKAEDGLRCVLSEGNTLFRPRWYDL-GPSPRSARRPLGIAAFVACPLYL----GPGKRWQ 441
Query: 521 TTERKGXXXXXXXXXXXXXGHSRFGIYYKRENPLQITTPLLGSVWNGRERTFLDI*SKLR 700
+ +G P + P L
Sbjct: 442 QQKGRG--------------------------PCSASAPFL------------------- 456
Query: 701 VELREQPSDGKLLSRSVQRALFSLRIPRSLSCEFPSGELKTCGALSIPSLEPRRKPPSPS 880
DG S + FS RI RSLSCEFPSGE T ALSIPSL+PR KPPSPS
Sbjct: 457 -------VDGAAGSST----FFSSRILRSLSCEFPSGEFNTFWALSIPSLKPRIKPPSPS 505
Query: 881 DS 886
DS
Sbjct: 506 DS 507
>emb|CBI23503.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 72.0 bits (175), Expect(3) = 6e-19
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +3
Query: 495 RLGPGKRWQQQKGRGPCSCCARPLLSQWGT 584
RLGPGKRWQQQKGRGPCSCCARPLLSQWG+
Sbjct: 194 RLGPGKRWQQQKGRGPCSCCARPLLSQWGS 223
Score = 48.9 bits (115), Expect(3) = 6e-19
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2
Query: 584 SRFGIYYKRENPLQITTPLLGS 649
SRFGIYYKRENPLQITTPLLGS
Sbjct: 223 SRFGIYYKRENPLQITTPLLGS 244
Score = 20.4 bits (41), Expect(3) = 6e-19
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1
Query: 463 LRALPALSNK 492
LRALPAL NK
Sbjct: 182 LRALPALYNK 191
>gb|EOY31163.1| Uncharacterized protein TCM_038148 [Theobroma cacao]
Length = 538
Score = 91.7 bits (226), Expect = 3e-16
Identities = 44/47 (93%), Positives = 46/47 (97%)
Frame = +1
Query: 583 QQVRHLLQKRESTSDNHASARQRVEWPRADLFGYIIQVESRVTGTAV 723
+QVRHLL+KRESTSDNHASARQRVEWPRADLFGYIIQVES VTGTAV
Sbjct: 492 EQVRHLLEKRESTSDNHASARQRVEWPRADLFGYIIQVESGVTGTAV 538
>sp|P15688.2|NU2M_BETVU RecName: Full=NADH-ubiquinone oxidoreductase chain 2; AltName:
Full=NADH dehydrogenase subunit 2
gi|12822|emb|CAA34728.1| NADH:ubiquinone reductase
subunit 2 [Beta vulgaris subsp. vulgaris]
Length = 515
Score = 90.9 bits (224), Expect = 6e-16
Identities = 64/142 (45%), Positives = 75/142 (52%), Gaps = 6/142 (4%)
Frame = +1
Query: 481 LSNKTGSARESAGNNRKEGVHVAAAPAPFLVNGAQQVRHLLQKRESTSDNHASARQRVEW 660
L +GSARESAGNNRKEGVHVAAA APFLVN A ++R +ASA
Sbjct: 77 LIKNSGSARESAGNNRKEGVHVAAASAPFLVNRAAGSATTTKERIHFKITNASAMAACGM 136
Query: 661 PRADLFGYIIQVESRVTGTAV*WKXXXXXXXXXXXXVENSSFPFV*IPQ------RRIKN 822
+DLFGYIIQVES VTGTA V+ + F + RI+N
Sbjct: 137 AGSDLFGYIIQVESGVTGTA------GLMENNFHGSVQRALFSLRILRSLRVNSLARIQN 190
Query: 823 LWGPIYSISRAPKKTSLPFRLH 888
WGP S +P KT LPF L+
Sbjct: 191 FWGPSIP-SSSPAKTPLPFGLN 211
Score = 68.6 bits (166), Expect = 3e-09
Identities = 72/230 (31%), Positives = 93/230 (40%), Gaps = 20/230 (8%)
Frame = +2
Query: 239 MLPPTIKGKARRREGDAAGEGKGXXXXXXXXXXIEKAEDGLGCVLSEGNTLF*PPWYEIA 418
ML TIKGKARRR+ A G+ K + + +G F I
Sbjct: 1 MLSLTIKGKARRRKERAFGD-----RDFLTFSSKTKKTENVNLSFEKGTRFF-DRGGMIF 54
Query: 419 GPSPPSARWPIGIAAFGLCLPFLIKPARPGKALATTERKGXXXXXXXXXXXXXGHSRFGI 598
GPSP SARWPIGIAAFGLCL FLIK + + A RK G+
Sbjct: 55 GPSPRSARWPIGIAAFGLCLLFLIKNSGSARESAGNNRKE------------------GV 96
Query: 599 YYKRENPLQITTPLLGSVWNGRERTFLDI*SK-----------------LRVELREQPSD 727
+ + + GS +ER I + ++VE +
Sbjct: 97 HVAAASAPFLVNRAAGSATTTKERIHFKITNASAMAACGMAGSDLFGYIIQVESGVTGTA 156
Query: 728 GKLLSR---SVQRALFSLRIPRSLSCEFPSGELKTCGALSIPSLEPRRKP 868
G + + SVQRALFSLRI RSL ++ SIPS P + P
Sbjct: 157 GLMENNFHGSVQRALFSLRILRSLRVN-SLARIQNFWGPSIPSSSPAKTP 205
>emb|CAA34729.1| unnamed protein product [Beta vulgaris subsp. vulgaris]
Length = 464
Score = 90.9 bits (224), Expect = 6e-16
Identities = 64/142 (45%), Positives = 75/142 (52%), Gaps = 6/142 (4%)
Frame = +1
Query: 481 LSNKTGSARESAGNNRKEGVHVAAAPAPFLVNGAQQVRHLLQKRESTSDNHASARQRVEW 660
L +GSARESAGNNRKEGVHVAAA APFLVN A ++R +ASA
Sbjct: 26 LIKNSGSARESAGNNRKEGVHVAAASAPFLVNRAAGSATTTKERIHFKITNASAMAACGM 85
Query: 661 PRADLFGYIIQVESRVTGTAV*WKXXXXXXXXXXXXVENSSFPFV*IPQ------RRIKN 822
+DLFGYIIQVES VTGTA V+ + F + RI+N
Sbjct: 86 AGSDLFGYIIQVESGVTGTA------GLMENNFHGSVQRALFSLRILRSLRVNSLARIQN 139
Query: 823 LWGPIYSISRAPKKTSLPFRLH 888
WGP S +P KT LPF L+
Sbjct: 140 FWGPSIP-SSSPAKTPLPFGLN 160
>ref|XP_004153848.1| PREDICTED: LOW QUALITY PROTEIN: NADH-ubiquinone oxidoreductase
chain 2-like, partial [Cucumis sativus]
Length = 472
Score = 74.3 bits (181), Expect = 5e-11
Identities = 35/42 (83%), Positives = 37/42 (88%)
Frame = +2
Query: 755 RALFSLRIPRSLSCEFPSGELKTCGALSIPSLEPRRKPPSPS 880
RALFSL IPRSLSC FPSGE +TCGALSIPSL+PR KPP PS
Sbjct: 44 RALFSLIIPRSLSCSFPSGEFETCGALSIPSLKPRXKPPLPS 85
>ref|YP_588306.1| hypothetical protein ZeamMp044 [Zea mays subsp. mays]
gi|40795129|gb|AAR91173.1| hypothetical protein
(mitochondrion) [Zea mays] gi|102579662|gb|ABF70942.1|
hypothetical protein (mitochondrion) [Zea mays subsp.
mays]
Length = 101
Score = 63.2 bits (152), Expect(3) = 1e-09
Identities = 31/45 (68%), Positives = 33/45 (73%), Gaps = 5/45 (11%)
Frame = +3
Query: 462 PSGFAC-----PF**NRLGPGKRWQQQKGRGPCSCCARPLLSQWG 581
PSGFAC F RLGPGKRWQQ K RGPCSCCARPL S++G
Sbjct: 49 PSGFACRRSNKEF---RLGPGKRWQQHKERGPCSCCARPLSSRFG 90
Score = 25.0 bits (53), Expect(3) = 1e-09
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 307 LSEIEIFFLFHREGRG 354
LSEI++FF+ EGRG
Sbjct: 29 LSEIDLFFIEKEEGRG 44
Score = 21.2 bits (43), Expect(3) = 1e-09
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2
Query: 251 TIKGKARRREG 283
T KGKARRR G
Sbjct: 13 TTKGKARRRGG 23
>ref|XP_002534065.1| conserved hypothetical protein [Ricinus communis]
gi|223525904|gb|EEF28320.1| conserved hypothetical
protein [Ricinus communis]
Length = 83
Score = 65.9 bits (159), Expect = 2e-08
Identities = 39/80 (48%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Frame = +3
Query: 354 MA*GASYLKGTRFFDRRGMRXXXXXXXXXXXXXXXQPSGFACPF**N---RLGPGKRWQQ 524
M GA YLKGTRFF+R GM S A P N RL P +RWQQ
Sbjct: 1 MVYGACYLKGTRFFNRGGM--IAGPSPRSARWPIGDSSLQALPALSNKNFRLDPRERWQQ 58
Query: 525 QKGRGPCSCCARPLLSQWGT 584
KG+GPCSC RPLLS+WG+
Sbjct: 59 HKGKGPCSCYVRPLLSKWGS 78
>ref|XP_006401945.1| hypothetical protein EUTSA_v10015951mg, partial [Eutrema
salsugineum] gi|557103035|gb|ESQ43398.1| hypothetical
protein EUTSA_v10015951mg, partial [Eutrema salsugineum]
Length = 414
Score = 58.5 bits (140), Expect(2) = 2e-08
Identities = 45/109 (41%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Frame = +3
Query: 234 RECFPQPLKERLDEGREMRR-----GKEKAFG-DRDFLSFSSRRPRMA*GASYLKGTRFF 395
+EC P K + RR GK K F RDFLS+ PRMA GA YLKG RFF
Sbjct: 86 KECPPSSDKVSTSPRKARRREGDAAGKGKGFWRSRDFLSW----PRMAYGACYLKGARFF 141
Query: 396 DRRGMRXXXXXXXXXXXXXXXQPSGFACPF**NRLGPGKRWQQQKGRGP 542
DR M LGPGKRWQQQK RGP
Sbjct: 142 DRGAMIAGASPQYNKKFW----------------LGPGKRWQQQKRRGP 174
Score = 26.9 bits (58), Expect(2) = 2e-08
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +1
Query: 151 LQIMFEPMFKPTP 189
LQIMFEPMFK P
Sbjct: 69 LQIMFEPMFKQNP 81
>gb|AEZ03709.1| hypothetical protein (mitochondrion) [Oryza sativa Indica Group]
gi|374277705|gb|AEZ03810.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
Length = 164
Score = 60.5 bits (145), Expect = 8e-07
Identities = 29/43 (67%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Frame = -3
Query: 583 VPH*LRRGRAQQLHGPLPFCCCQRFPGPSR--FY*KGQAKPEG 461
+P+ L GRAQQLHGPL CCCQRFPGPSR + QAKPEG
Sbjct: 1 MPNLLLSGRAQQLHGPLSLCCCQRFPGPSRNSLLERRQAKPEG 43
>ref|YP_173425.1| hypothetical protein NitaMp084 [Nicotiana tabacum]
gi|56806589|dbj|BAD83490.1| hypothetical protein
(mitochondrion) [Nicotiana tabacum]
Length = 105
Score = 58.5 bits (140), Expect = 3e-06
Identities = 42/98 (42%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Frame = -1
Query: 543 MDPFLSVVASAFPGRAG-FIRKGRQSPKAAIPIGQRAEGGEGPAISYHGGQKSVFPSDKT 367
MDPFLSVVASAFPGRAG F KG+ P+ + P ++ GP +K+ +
Sbjct: 1 MDPFLSVVASAFPGRAGIFYYKGQAKPEGSYP-NRKGGTRRGPGNHTTAVKKACSLQIRR 59
Query: 366 ---HPRPSSAFSMKKKENLDLRKPFPSPAASPSLRRAF 262
HPRPSS FSMKKK FP + PS +F
Sbjct: 60 TVGHPRPSS-FSMKKKSRSPKAFSFPRRTSLPSSSLSF 96