BLASTX nr result

ID: Rauwolfia21_contig00016296 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00016296
         (219 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006577061.1| PREDICTED: growth-regulating factor 3 isofor...    61   1e-07
ref|XP_003521448.1| PREDICTED: growth-regulating factor 3 isofor...    61   1e-07
ref|XP_002534110.1| conserved hypothetical protein [Ricinus comm...    59   9e-07
ref|XP_006594200.1| PREDICTED: growth-regulating factor 3-like i...    58   1e-06
ref|XP_003553589.1| PREDICTED: growth-regulating factor 3-like [...    58   1e-06
ref|XP_003542566.1| PREDICTED: growth-regulating factor 3-like i...    58   1e-06

>ref|XP_006577061.1| PREDICTED: growth-regulating factor 3 isoform X2 [Glycine max]
          Length = 308

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 35/75 (46%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
 Frame = -2

Query: 218 LHLSHRSSESIVETHNDVCGNEKSSGSSGQILRHFFDDWPRSLQESDNA---GXXXXXXX 48
           LHL  RSS +  E  + V G+ +S G  G +LRHFFDDWPRSLQ+SDN            
Sbjct: 160 LHLDERSSGTKNEDEDHVGGDGRSGGGGGHMLRHFFDDWPRSLQDSDNVENNAAAGRSLS 219

Query: 47  XXXXXSISDFSLKLS 3
                + SD SLKLS
Sbjct: 220 ISMPGASSDVSLKLS 234


>ref|XP_003521448.1| PREDICTED: growth-regulating factor 3 isoform X1 [Glycine max]
          Length = 384

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 35/75 (46%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
 Frame = -2

Query: 218 LHLSHRSSESIVETHNDVCGNEKSSGSSGQILRHFFDDWPRSLQESDNA---GXXXXXXX 48
           LHL  RSS +  E  + V G+ +S G  G +LRHFFDDWPRSLQ+SDN            
Sbjct: 236 LHLDERSSGTKNEDEDHVGGDGRSGGGGGHMLRHFFDDWPRSLQDSDNVENNAAAGRSLS 295

Query: 47  XXXXXSISDFSLKLS 3
                + SD SLKLS
Sbjct: 296 ISMPGASSDVSLKLS 310


>ref|XP_002534110.1| conserved hypothetical protein [Ricinus communis]
           gi|223525833|gb|EEF28270.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 428

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 38/81 (46%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
 Frame = -2

Query: 218 LHLSHRSSESIVETHNDVCG--NEKSSGSSGQILRHFFDDWPRSLQESDNAGXXXXXXXX 45
           LHL++RSS+   E    + G  NE ++ S G ILRHFFDDWPRSLQE DN          
Sbjct: 276 LHLNNRSSDPKAEIKGLLLGPQNEVANRSDGHILRHFFDDWPRSLQEPDNTASNASPMNS 335

Query: 44  XXXXSI-------SDFSLKLS 3
               SI       SD SLKLS
Sbjct: 336 ATCLSISMSGNSSSDVSLKLS 356


>ref|XP_006594200.1| PREDICTED: growth-regulating factor 3-like isoform X2 [Glycine max]
          Length = 331

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/54 (53%), Positives = 35/54 (64%), Gaps = 6/54 (11%)
 Frame = -2

Query: 218 LHLSHRSS------ESIVETHNDVCGNEKSSGSSGQILRHFFDDWPRSLQESDN 75
           LHLS  SS      +S  E H+ V G+  S+ S G +LRHFFDDWPR+LQE DN
Sbjct: 194 LHLSESSSGAKSDNKSFFENHDHVDGDGNSAKSDGHVLRHFFDDWPRTLQEPDN 247


>ref|XP_003553589.1| PREDICTED: growth-regulating factor 3-like [Glycine max]
          Length = 388

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/48 (56%), Positives = 34/48 (70%)
 Frame = -2

Query: 218 LHLSHRSSESIVETHNDVCGNEKSSGSSGQILRHFFDDWPRSLQESDN 75
           L L+ RSS +  E  + V G+ +S G  G +LRHFFDDWPRSLQ+SDN
Sbjct: 236 LRLNERSSGTKNEDEDHVGGDGRSGGGGGHMLRHFFDDWPRSLQDSDN 283


>ref|XP_003542566.1| PREDICTED: growth-regulating factor 3-like isoform X1 [Glycine max]
          Length = 335

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/54 (53%), Positives = 35/54 (64%), Gaps = 6/54 (11%)
 Frame = -2

Query: 218 LHLSHRSS------ESIVETHNDVCGNEKSSGSSGQILRHFFDDWPRSLQESDN 75
           LHLS  SS      +S  E H+ V G+  S+ S G +LRHFFDDWPR+LQE DN
Sbjct: 198 LHLSESSSGAKSDNKSFFENHDHVDGDGNSAKSDGHVLRHFFDDWPRTLQEPDN 251


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