BLASTX nr result

ID: Rauwolfia21_contig00016239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00016239
         (303 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006470228.1| PREDICTED: ribosomal RNA-processing protein ...    41   5e-06
ref|XP_006446617.1| hypothetical protein CICLE_v10016139mg [Citr...    41   5e-06

>ref|XP_006470228.1| PREDICTED: ribosomal RNA-processing protein 8-like [Citrus
           sinensis]
          Length = 294

 Score = 40.8 bits (94), Expect(2) = 5e-06
 Identities = 18/27 (66%), Positives = 20/27 (74%)
 Frame = +1

Query: 55  GADSNKFSKAICDFGFTCVSKDCSTHL 135
           GAD NKFSKA+CD GF  VSKD S  +
Sbjct: 236 GADPNKFSKAVCDLGFAPVSKDFSNKM 262



 Score = 35.0 bits (79), Expect(2) = 5e-06
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = +2

Query: 2   SGWLLVAEVKSRFEPTT 52
           SGWLL+AEVKSRF+P T
Sbjct: 218 SGWLLIAEVKSRFDPNT 234


>ref|XP_006446617.1| hypothetical protein CICLE_v10016139mg [Citrus clementina]
           gi|557549228|gb|ESR59857.1| hypothetical protein
           CICLE_v10016139mg [Citrus clementina]
          Length = 290

 Score = 40.8 bits (94), Expect(2) = 5e-06
 Identities = 18/27 (66%), Positives = 20/27 (74%)
 Frame = +1

Query: 55  GADSNKFSKAICDFGFTCVSKDCSTHL 135
           GAD NKFSKA+CD GF  VSKD S  +
Sbjct: 232 GADPNKFSKAVCDLGFAPVSKDFSNKM 258



 Score = 35.0 bits (79), Expect(2) = 5e-06
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = +2

Query: 2   SGWLLVAEVKSRFEPTT 52
           SGWLL+AEVKSRF+P T
Sbjct: 214 SGWLLIAEVKSRFDPNT 230


Top