BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00016229
         (1186 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004241021.1| PREDICTED: DNA repair protein XRCC4-like iso...   339   1e-90
ref|XP_006350671.1| PREDICTED: DNA repair protein XRCC4-like iso...   335   3e-89
ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Ci...   334   4e-89
ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citr...   325   2e-86
ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citr...   324   5e-86
ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis v...   318   2e-84
emb|CBI26376.3| unnamed protein product [Vitis vinifera]              318   2e-84
gb|EOY05930.1| DNA repair protein XRCC4, putative isoform 1 [The...   318   4e-84
ref|XP_004290386.1| PREDICTED: DNA repair protein XRCC4-like iso...   315   3e-83
ref|XP_006420172.1| hypothetical protein CICLE_v10007171mg, part...   314   5e-83
ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus ...   313   9e-83
gb|EXB29874.1| DNA repair protein XRCC4 [Morus notabilis]             309   1e-81
gb|EOY05931.1| DNA ligase iv-binding protein XRCC4 isoform 2 [Th...   308   2e-81
gb|EOY05932.1| DNA ligase iv-binding protein XRCC4 isoform 3 [Th...   308   3e-81
dbj|BAF03494.1| XRCC4 homolog [Populus nigra]                         304   4e-80
ref|XP_004495346.1| PREDICTED: DNA repair protein XRCC4-like [Ci...   299   2e-78
ref|XP_003590794.1| DNA repair protein XRCC4 [Medicago truncatul...   295   2e-77
ref|XP_006298402.1| hypothetical protein CARUB_v10014474mg [Caps...   293   7e-77
ref|XP_002315726.1| predicted protein [Populus trichocarpa]           291   4e-76
ref|XP_004136882.1| PREDICTED: DNA repair protein XRCC4-like [Cu...   287   5e-75

>ref|XP_004241021.1| PREDICTED: DNA repair protein XRCC4-like isoform 1 [Solanum
           lycopersicum]
          Length = 254

 Score =  339 bits (870), Expect = 1e-90
 Identities = 178/260 (68%), Positives = 198/260 (76%), Gaps = 1/260 (0%)
 Frame = +3

Query: 99  SPRHTCLKLEITTRSDSGTQEVERLFVKGTWYSSRFDLAITDGLNAWTCNASEEEIQERA 278
           SP+HTCLKL I+ +        E++FVKGTW+SS FDL ITDGL++WTC+ASEEE++ERA
Sbjct: 5   SPKHTCLKLVISNK--------EQIFVKGTWFSSYFDLFITDGLHSWTCHASEEEVEERA 56

Query: 279 SQWDQPVVEYIELAEKYLGFQQPGSVYGFSDAEGGCKRLSWTFEKEGIKLEWRWKCQPSP 458
           SQWDQPV EYI+L EKYLGFQQPGSVYGF DA  G KRLSWTFEKEG KLEWRWKCQ S 
Sbjct: 57  SQWDQPVSEYIDLGEKYLGFQQPGSVYGFDDAGTGHKRLSWTFEKEGTKLEWRWKCQSSS 116

Query: 459 FSKKTTADILDFLMDANIGLSEEVVRKTDSFEKLKVEAEKCLAQSEQLSKEKAEFESEIY 638
            SKKTTADILDFLMDANI LS+EVV KT+SFE++KVEAEKCL QSE+LSKEK EFES IY
Sbjct: 117 NSKKTTADILDFLMDANIRLSDEVVSKTESFERMKVEAEKCLTQSEKLSKEKEEFESAIY 176

Query: 639 TKFVGVLNAKKAKLRELRDRLSKQ-KSAEVPXXXXXXSTDNTESFXXXXXXXXXXXXXXX 815
            KF+GVLNAKK KLRELRD+LSKQ  S E P      STD TE+F               
Sbjct: 177 AKFLGVLNAKKKKLRELRDKLSKQATSVEEPVEEDAQSTDRTETFDEEISGEEVEKDD-- 234

Query: 816 XLVGTSKDVPPSRACGRKRK 875
             VGTSKDVP  R  GR RK
Sbjct: 235 --VGTSKDVPARRGRGRGRK 252


>ref|XP_006350671.1| PREDICTED: DNA repair protein XRCC4-like isoform X1 [Solanum
           tuberosum]
          Length = 267

 Score =  335 bits (858), Expect = 3e-89
 Identities = 176/269 (65%), Positives = 199/269 (73%), Gaps = 10/269 (3%)
 Frame = +3

Query: 99  SPRHTCLKLEITTRSDSGTQEVERLFVKGTWYSSRFDLAITDGLNAWTCNASEEEIQERA 278
           SP+HTCLKL I+ +        E++FVKGTW+SS FDL ITDGL +WTC+ASEEE++ERA
Sbjct: 5   SPKHTCLKLVISNK--------EQIFVKGTWFSSHFDLFITDGLQSWTCHASEEEVEERA 56

Query: 279 SQWDQPVVEYIELAEKYLGFQQPGSVYGFSDAEGGCKRLSWTFEKEGIKLEWRWKCQPSP 458
           SQWDQPV EYI+LAEKYLGFQQPGS YGF DA  G KRLSWTFEKEG KLEWRWKCQPS 
Sbjct: 57  SQWDQPVSEYIDLAEKYLGFQQPGSAYGFDDAGTGHKRLSWTFEKEGTKLEWRWKCQPSS 116

Query: 459 FSKKTTADILDFLMDANIGLSEEVVRKTDSFEKLKVEAEKCLAQSEQLSKEKAEFESEIY 638
            SKKTTADILDFLMDANI LS+EVV KT+SFE++KVEAEKCL QSE+LS+EK EFES IY
Sbjct: 117 NSKKTTADILDFLMDANIRLSDEVVSKTESFERMKVEAEKCLTQSEKLSREKEEFESAIY 176

Query: 639 TKFVGVLNAKKAKLRELRDRLSKQKSA-EVPXXXXXXSTDNTESF---------XXXXXX 788
            KF+GVLN+KK KLRELRD+LSKQ +A E P      STD T++F               
Sbjct: 177 AKFLGVLNSKKKKLRELRDKLSKQGTAVEEPVEEDAQSTDRTKTFDEGSDEEMSGEEVEK 236

Query: 789 XXXXXXXXXXLVGTSKDVPPSRACGRKRK 875
                      VGTSKDVP  R  GR RK
Sbjct: 237 EDVGTSSKKDDVGTSKDVPAGRGRGRGRK 265


>ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Citrus sinensis]
          Length = 256

 Score =  334 bits (857), Expect = 4e-89
 Identities = 168/256 (65%), Positives = 192/256 (75%)
 Frame = +3

Query: 105 RHTCLKLEITTRSDSGTQEVERLFVKGTWYSSRFDLAITDGLNAWTCNASEEEIQERASQ 284
           RHTCLKLEI+  +D        +FVKGTW+ + FDL+ITDGLN W CNASEE++++RA+Q
Sbjct: 4   RHTCLKLEISDATDP-------IFVKGTWFETHFDLSITDGLNVWLCNASEEQVKDRAAQ 56

Query: 285 WDQPVVEYIELAEKYLGFQQPGSVYGFSDAEGGCKRLSWTFEKEGIKLEWRWKCQPSPFS 464
           WDQPV EYI+LAE+YLGFQQPGSVYGF+DA  GCKRLSWTFEKEG KLEWRWKC P+P S
Sbjct: 57  WDQPVTEYIKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKCGPAPNS 116

Query: 465 KKTTADILDFLMDANIGLSEEVVRKTDSFEKLKVEAEKCLAQSEQLSKEKAEFESEIYTK 644
           KK TA ILDFLMDANI LS+EVV KT SFE+LKVEAEKCLAQSE+ + EK EFES IY K
Sbjct: 117 KKVTAGILDFLMDANIRLSDEVVTKTQSFERLKVEAEKCLAQSERFNNEKLEFESAIYAK 176

Query: 645 FVGVLNAKKAKLRELRDRLSKQKSAEVPXXXXXXSTDNTESFXXXXXXXXXXXXXXXXLV 824
           F+GVLN+KK+KLRELRD+LSKQ            STD TESF                + 
Sbjct: 177 FLGVLNSKKSKLRELRDKLSKQAVMGDLQQEEEQSTDKTESFDEGSDDDKSEEEPAKAIT 236

Query: 825 GTSKDVPPSRACGRKR 872
            TSK VP SRA GRKR
Sbjct: 237 STSKGVPASRARGRKR 252


>ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citrus clementina]
           gi|557522035|gb|ESR33402.1| hypothetical protein
           CICLE_v10005690mg [Citrus clementina]
          Length = 256

 Score =  325 bits (833), Expect = 2e-86
 Identities = 165/259 (63%), Positives = 191/259 (73%)
 Frame = +3

Query: 96  DSPRHTCLKLEITTRSDSGTQEVERLFVKGTWYSSRFDLAITDGLNAWTCNASEEEIQER 275
           ++  HTCLKLEI   +D        +FVKGTW+ + FDL+ITDGLNAW CNASEE++++R
Sbjct: 2   EATSHTCLKLEIPDATDP-------IFVKGTWFQTHFDLSITDGLNAWLCNASEEQVKDR 54

Query: 276 ASQWDQPVVEYIELAEKYLGFQQPGSVYGFSDAEGGCKRLSWTFEKEGIKLEWRWKCQPS 455
           A+ WDQPV EY++LAE+YLGFQQPGSVYGF+DA  GCKRLSWTFEKEG KLEWRWKC  +
Sbjct: 55  AALWDQPVTEYVKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKCGSA 114

Query: 456 PFSKKTTADILDFLMDANIGLSEEVVRKTDSFEKLKVEAEKCLAQSEQLSKEKAEFESEI 635
           P SKK TA ILDFLMDANI LS+EVV KT SFE+LKVEAEKCLAQSE+   EK EFES I
Sbjct: 115 PNSKKVTAGILDFLMDANIRLSDEVVTKTQSFERLKVEAEKCLAQSERFKNEKLEFESAI 174

Query: 636 YTKFVGVLNAKKAKLRELRDRLSKQKSAEVPXXXXXXSTDNTESFXXXXXXXXXXXXXXX 815
           Y KF+GVLN+KK+KLRELRD+LSKQ +          STD TESF               
Sbjct: 175 YAKFLGVLNSKKSKLRELRDKLSKQ-AVMGDLQQEEQSTDKTESFDEGSDDDKSEEEPAK 233

Query: 816 XLVGTSKDVPPSRACGRKR 872
            +  TSK VP SRA GRKR
Sbjct: 234 DITSTSKGVPASRARGRKR 252


>ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citrus clementina]
           gi|557522040|gb|ESR33407.1| hypothetical protein
           CICLE_v10005689mg [Citrus clementina]
          Length = 256

 Score =  324 bits (830), Expect = 5e-86
 Identities = 164/256 (64%), Positives = 188/256 (73%)
 Frame = +3

Query: 105 RHTCLKLEITTRSDSGTQEVERLFVKGTWYSSRFDLAITDGLNAWTCNASEEEIQERASQ 284
           RHTCLKLEI   +D        +F KGTW+ + FDL+ITDGLNAW CNASEE++++RA+Q
Sbjct: 4   RHTCLKLEIPDATDP-------IFAKGTWFQTHFDLSITDGLNAWLCNASEEQVKDRAAQ 56

Query: 285 WDQPVVEYIELAEKYLGFQQPGSVYGFSDAEGGCKRLSWTFEKEGIKLEWRWKCQPSPFS 464
           WDQPV EYI+LAE+YLGFQQPGSVYGF+DA  GCKRLSWTFEKEG KLEWRWK  P+P S
Sbjct: 57  WDQPVTEYIKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKFGPAPNS 116

Query: 465 KKTTADILDFLMDANIGLSEEVVRKTDSFEKLKVEAEKCLAQSEQLSKEKAEFESEIYTK 644
           KK TA ILDFLMDANI LS+EVV KT SFE+LKVE +KCLAQSE+   EK EFES IY+K
Sbjct: 117 KKVTAGILDFLMDANIRLSDEVVTKTQSFERLKVETQKCLAQSERFKNEKVEFESAIYSK 176

Query: 645 FVGVLNAKKAKLRELRDRLSKQKSAEVPXXXXXXSTDNTESFXXXXXXXXXXXXXXXXLV 824
           F+GVLN+KK+KLRELRD+LSKQ            STD TESF                + 
Sbjct: 177 FLGVLNSKKSKLRELRDKLSKQAVMGDLQQEEEESTDKTESFDGGSDDDKSEEQPTKDIT 236

Query: 825 GTSKDVPPSRACGRKR 872
            TS  VP SRA GRKR
Sbjct: 237 STSIGVPASRARGRKR 252


>ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis vinifera]
          Length = 259

 Score =  318 bits (816), Expect = 2e-84
 Identities = 163/261 (62%), Positives = 193/261 (73%)
 Frame = +3

Query: 90  MEDSPRHTCLKLEITTRSDSGTQEVERLFVKGTWYSSRFDLAITDGLNAWTCNASEEEIQ 269
           ME +PRH+CLKL+I  +S       E +F+K TW+ S F L+ITDGL+AW CNASE+E++
Sbjct: 1   MEPTPRHSCLKLQIPNQS-------EPIFIKATWFPSHFHLSITDGLHAWLCNASEDEVR 53

Query: 270 ERASQWDQPVVEYIELAEKYLGFQQPGSVYGFSDAEGGCKRLSWTFEKEGIKLEWRWKCQ 449
           ERA+QWDQPV +YI LAE++LGFQQPGSVYGFSDA  G +RLSWTFEKEG KLEWRWKC 
Sbjct: 54  ERAAQWDQPVSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFEKEGTKLEWRWKCG 113

Query: 450 PSPFSKKTTADILDFLMDANIGLSEEVVRKTDSFEKLKVEAEKCLAQSEQLSKEKAEFES 629
            SP S+ TTA +LDFLM+ANI LSEEVV KT SFE+LKVEAEKCLAQSE+ + EKAEFES
Sbjct: 114 LSPDSRSTTAGVLDFLMNANIRLSEEVVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFES 173

Query: 630 EIYTKFVGVLNAKKAKLRELRDRLSKQKSAEVPXXXXXXSTDNTESFXXXXXXXXXXXXX 809
            IY KF+GVLN+KKAKLRELRD++SK+++          STD T SF             
Sbjct: 174 AIYAKFLGVLNSKKAKLRELRDQISKEETTGKLPQEEDESTDKTLSFDDESDNEAIEEES 233

Query: 810 XXXLVGTSKDVPPSRACGRKR 872
              L GTSK V  SR  GRKR
Sbjct: 234 SKNLTGTSKHVSTSRPRGRKR 254


>emb|CBI26376.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  318 bits (816), Expect = 2e-84
 Identities = 163/261 (62%), Positives = 193/261 (73%)
 Frame = +3

Query: 90  MEDSPRHTCLKLEITTRSDSGTQEVERLFVKGTWYSSRFDLAITDGLNAWTCNASEEEIQ 269
           ME +PRH+CLKL+I  +S       E +F+K TW+ S F L+ITDGL+AW CNASE+E++
Sbjct: 1   MEPTPRHSCLKLQIPNQS-------EPIFIKATWFPSHFHLSITDGLHAWLCNASEDEVR 53

Query: 270 ERASQWDQPVVEYIELAEKYLGFQQPGSVYGFSDAEGGCKRLSWTFEKEGIKLEWRWKCQ 449
           ERA+QWDQPV +YI LAE++LGFQQPGSVYGFSDA  G +RLSWTFEKEG KLEWRWKC 
Sbjct: 54  ERAAQWDQPVSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFEKEGTKLEWRWKCG 113

Query: 450 PSPFSKKTTADILDFLMDANIGLSEEVVRKTDSFEKLKVEAEKCLAQSEQLSKEKAEFES 629
            SP S+ TTA +LDFLM+ANI LSEEVV KT SFE+LKVEAEKCLAQSE+ + EKAEFES
Sbjct: 114 LSPDSRSTTAGVLDFLMNANIRLSEEVVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFES 173

Query: 630 EIYTKFVGVLNAKKAKLRELRDRLSKQKSAEVPXXXXXXSTDNTESFXXXXXXXXXXXXX 809
            IY KF+GVLN+KKAKLRELRD++SK+++          STD T SF             
Sbjct: 174 AIYAKFLGVLNSKKAKLRELRDQISKEETTGKLPQEEDESTDKTLSFDDESDNEAIEEES 233

Query: 810 XXXLVGTSKDVPPSRACGRKR 872
              L GTSK V  SR  GRKR
Sbjct: 234 SKNLTGTSKHVSTSRPRGRKR 254


>gb|EOY05930.1| DNA repair protein XRCC4, putative isoform 1 [Theobroma cacao]
          Length = 263

 Score =  318 bits (814), Expect = 4e-84
 Identities = 164/265 (61%), Positives = 189/265 (71%)
 Frame = +3

Query: 81  EPSMEDSPRHTCLKLEITTRSDSGTQEVERLFVKGTWYSSRFDLAITDGLNAWTCNASEE 260
           E S   + RHTCLKLEI +         E +FVKGTW+ + FD++ITDGL+AW CNA+EE
Sbjct: 2   ETSSSSTTRHTCLKLEIPS--------TEPIFVKGTWFDAHFDISITDGLHAWVCNATEE 53

Query: 261 EIQERASQWDQPVVEYIELAEKYLGFQQPGSVYGFSDAEGGCKRLSWTFEKEGIKLEWRW 440
           E++ERA+QWDQPV EYIELAE+YLGFQQ GSVY F+DA    KRLSW FEKEG KLEWRW
Sbjct: 54  EVKERAAQWDQPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLEWRW 113

Query: 441 KCQPSPFSKKTTADILDFLMDANIGLSEEVVRKTDSFEKLKVEAEKCLAQSEQLSKEKAE 620
           K +PSP S+K T  ILDFLMDANI LSEEV RKT SFEKLKVEAEKCL QSE+ + EK E
Sbjct: 114 KFRPSPDSQKITGGILDFLMDANIRLSEEVFRKTQSFEKLKVEAEKCLEQSERSTNEKME 173

Query: 621 FESEIYTKFVGVLNAKKAKLRELRDRLSKQKSAEVPXXXXXXSTDNTESFXXXXXXXXXX 800
           FESEIY KF+GVLN+KKAKLRELRD+LSKQ++          STD TES+          
Sbjct: 174 FESEIYAKFLGVLNSKKAKLRELRDQLSKQETTGKALMEEEDSTDKTESYHTGSDAEGGE 233

Query: 801 XXXXXXLVGTSKDVPPSRACGRKRK 875
                 L  T KDVP +   GR RK
Sbjct: 234 EEPEKNLTSTCKDVPAAAGRGRGRK 258


>ref|XP_004290386.1| PREDICTED: DNA repair protein XRCC4-like isoform 1 [Fragaria vesca
           subsp. vesca]
          Length = 259

 Score =  315 bits (806), Expect = 3e-83
 Identities = 160/265 (60%), Positives = 195/265 (73%), Gaps = 4/265 (1%)
 Frame = +3

Query: 90  MEDS----PRHTCLKLEITTRSDSGTQEVERLFVKGTWYSSRFDLAITDGLNAWTCNASE 257
           MED     PR +CLKLE         +E + +FVKGTW+ SRFDL+ITDGLNAW C+ASE
Sbjct: 1   MEDDGSVVPRQSCLKLE--------PKESQPIFVKGTWFHSRFDLSITDGLNAWVCHASE 52

Query: 258 EEIQERASQWDQPVVEYIELAEKYLGFQQPGSVYGFSDAEGGCKRLSWTFEKEGIKLEWR 437
           + +++RA+QWDQPV +Y+ LAE+YLGFQ P SVY F+DA  G KRLSWTF+KEG KLEWR
Sbjct: 53  DAVRDRAAQWDQPVPDYVSLAERYLGFQHPDSVYKFTDAGDGHKRLSWTFDKEGTKLEWR 112

Query: 438 WKCQPSPFSKKTTADILDFLMDANIGLSEEVVRKTDSFEKLKVEAEKCLAQSEQLSKEKA 617
           WKC+PSP SK+TTA +LDFLMDAN+GLSEEVVRKT SFE+LKVEAE CL QSE+++ EK 
Sbjct: 113 WKCEPSPNSKETTAAVLDFLMDANVGLSEEVVRKTQSFERLKVEAEMCLIQSERIANEKI 172

Query: 618 EFESEIYTKFVGVLNAKKAKLRELRDRLSKQKSAEVPXXXXXXSTDNTESFXXXXXXXXX 797
           EFES +Y KF+GVLN+KK KLRELRD+LSKQ++A         STD TE++         
Sbjct: 173 EFESAVYAKFLGVLNSKKTKLRELRDKLSKQEAAGKLPEQEEESTDKTETYVSDDENSEV 232

Query: 798 XXXXXXXLVGTSKDVPPSRACGRKR 872
                     TSKD+P SR+ GRKR
Sbjct: 233 DSLKDPP--PTSKDIPSSRSQGRKR 255


>ref|XP_006420172.1| hypothetical protein CICLE_v10007171mg, partial [Citrus clementina]
           gi|557522045|gb|ESR33412.1| hypothetical protein
           CICLE_v10007171mg, partial [Citrus clementina]
          Length = 243

 Score =  314 bits (804), Expect = 5e-83
 Identities = 154/236 (65%), Positives = 178/236 (75%)
 Frame = +3

Query: 165 ERLFVKGTWYSSRFDLAITDGLNAWTCNASEEEIQERASQWDQPVVEYIELAEKYLGFQQ 344
           +  +VKGTW+ + FDL+ITDGLNAW CNASEE++++RA+QWDQPV EY++LAE+YLGFQQ
Sbjct: 4   DETYVKGTWFQTHFDLSITDGLNAWLCNASEEQVKDRAAQWDQPVTEYVKLAERYLGFQQ 63

Query: 345 PGSVYGFSDAEGGCKRLSWTFEKEGIKLEWRWKCQPSPFSKKTTADILDFLMDANIGLSE 524
           PGSVY F+DA  GCKRLSWTFEKEG KLEWRWKC  +P SKK TA ILDFLMDANI LS+
Sbjct: 64  PGSVYAFTDAADGCKRLSWTFEKEGTKLEWRWKCGSAPNSKKVTAGILDFLMDANIRLSD 123

Query: 525 EVVRKTDSFEKLKVEAEKCLAQSEQLSKEKAEFESEIYTKFVGVLNAKKAKLRELRDRLS 704
           EVV KT SFE+LKVEAEKCLAQSE+   EK EFES +Y KF+GVLN+KK+KLRELRD+LS
Sbjct: 124 EVVTKTQSFERLKVEAEKCLAQSERFKNEKLEFESAVYAKFLGVLNSKKSKLRELRDKLS 183

Query: 705 KQKSAEVPXXXXXXSTDNTESFXXXXXXXXXXXXXXXXLVGTSKDVPPSRACGRKR 872
           KQ            STD TESF                +  TSK VP SRA GRKR
Sbjct: 184 KQAVMGDLQQEEEQSTDKTESFDEGSDDDKSEEEPAKDITSTSKGVPASRARGRKR 239


>ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus communis]
           gi|223543643|gb|EEF45171.1| DNA-repair protein XRCC4,
           putative [Ricinus communis]
          Length = 265

 Score =  313 bits (802), Expect = 9e-83
 Identities = 163/261 (62%), Positives = 190/261 (72%), Gaps = 2/261 (0%)
 Frame = +3

Query: 96  DSPRHTCLKLEITTRSDSGTQEVERLFVKGTWYSSRFDLAITDGLNAWTCNASEEEIQER 275
           ++ RHTCLKLEIT          E +FVKGTW+ S F L+ITDGLNAW CNA+E +++ER
Sbjct: 11  ETARHTCLKLEIT----------EPIFVKGTWFDSHFHLSITDGLNAWVCNATEGQVKER 60

Query: 276 ASQWDQPVVEYIELAEKYLGFQQPGSVYGFSDAEGGCKRLSWTFEKEGIKLEWRWKCQPS 455
           A+QWDQPV EYI LAE YLGFQQPGS+Y F+DA    KRLSWTFEKEG KLEWRWKCQPS
Sbjct: 61  AAQWDQPVSEYINLAEHYLGFQQPGSIYRFADAGDSHKRLSWTFEKEGTKLEWRWKCQPS 120

Query: 456 PFSKKTTADILDFLMDANIGLSEEVVRKTDSFEKLKVEAEKCLAQSEQLSKEKAEFESEI 635
           P +K TTA ILDFLMDANI LSEEVV+KT SFE+LK EA+KCL QSE+ + EK EFES I
Sbjct: 121 PDNKMTTAGILDFLMDANIRLSEEVVKKTHSFERLKEEADKCLTQSERFAGEKTEFESSI 180

Query: 636 YTKFVGVLNAKKAKLRELRDRLSKQK-SAEVPXXXXXXSTDNTESFXXXXXXXXXXXXXX 812
           Y KF+ VLN+KK KLR+LRD+LSK++ S ++P      STD TESF              
Sbjct: 181 YAKFLAVLNSKKRKLRQLRDQLSKKEASGKLPQEEEEESTDKTESFEEDSSDGDKSEEEP 240

Query: 813 XXLV-GTSKDVPPSRACGRKR 872
              V GTS+D P SR  GRKR
Sbjct: 241 PEKVTGTSEDKPSSRGRGRKR 261


>gb|EXB29874.1| DNA repair protein XRCC4 [Morus notabilis]
          Length = 257

 Score =  309 bits (792), Expect = 1e-81
 Identities = 157/261 (60%), Positives = 188/261 (72%)
 Frame = +3

Query: 90  MEDSPRHTCLKLEITTRSDSGTQEVERLFVKGTWYSSRFDLAITDGLNAWTCNASEEEIQ 269
           ME+S RHTCLKLE         ++ + +FV  TW+ S F+L++TDG +AW C+ASEEE++
Sbjct: 1   MEESKRHTCLKLE--------PKDSDPIFVNATWFPSHFNLSVTDGHHAWICHASEEEVR 52

Query: 270 ERASQWDQPVVEYIELAEKYLGFQQPGSVYGFSDAEGGCKRLSWTFEKEGIKLEWRWKCQ 449
           +RA+QWDQPV EY+ LAE+YLGFQQP SVY F+DA  G KRLSWTFEKEG KL+WRWKCQ
Sbjct: 53  DRAAQWDQPVPEYVALAERYLGFQQPDSVYAFADAGDGHKRLSWTFEKEGTKLQWRWKCQ 112

Query: 450 PSPFSKKTTADILDFLMDANIGLSEEVVRKTDSFEKLKVEAEKCLAQSEQLSKEKAEFES 629
           P+P SKKTTA+ LDFLMDANI LSEEVV K+ SFE+LKVEAEKCL QSE++S EK EFES
Sbjct: 113 PAPDSKKTTAETLDFLMDANIRLSEEVVIKSQSFERLKVEAEKCLEQSEKISNEKMEFES 172

Query: 630 EIYTKFVGVLNAKKAKLRELRDRLSKQKSAEVPXXXXXXSTDNTESFXXXXXXXXXXXXX 809
            +Y KF+GVLN+KKAKLRELR +L K   A         STD TESF             
Sbjct: 173 TLYAKFLGVLNSKKAKLRELRAQLEKNDPAAGKLPQEEGSTDKTESFDDGSDDGKGEEES 232

Query: 810 XXXLVGTSKDVPPSRACGRKR 872
              + GTSK    SR+ GRKR
Sbjct: 233 SENVTGTSKGAQTSRSRGRKR 253


>gb|EOY05931.1| DNA ligase iv-binding protein XRCC4 isoform 2 [Theobroma cacao]
          Length = 276

 Score =  308 bits (790), Expect = 2e-81
 Identities = 164/278 (58%), Positives = 189/278 (67%), Gaps = 13/278 (4%)
 Frame = +3

Query: 81  EPSMEDSPRHTCLKLEITTRSDSGTQEVERLFVKGTWYSSRFDLAITDGLNAWTCNASEE 260
           E S   + RHTCLKLEI +         E +FVKGTW+ + FD++ITDGL+AW CNA+EE
Sbjct: 2   ETSSSSTTRHTCLKLEIPS--------TEPIFVKGTWFDAHFDISITDGLHAWVCNATEE 53

Query: 261 EIQERASQWDQPVVEYIELAEKYLGFQQPGSVYGFSDAEGGCKRLSWTFEKEGIKLEWRW 440
           E++ERA+QWDQPV EYIELAE+YLGFQQ GSVY F+DA    KRLSW FEKEG KLEWRW
Sbjct: 54  EVKERAAQWDQPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLEWRW 113

Query: 441 KCQPSPFSKKTTADILDFLMDANIGLS-------------EEVVRKTDSFEKLKVEAEKC 581
           K +PSP S+K T  ILDFLMDANI LS             EEV RKT SFEKLKVEAEKC
Sbjct: 114 KFRPSPDSQKITGGILDFLMDANIRLSHVCVCVCVCVCLQEEVFRKTQSFEKLKVEAEKC 173

Query: 582 LAQSEQLSKEKAEFESEIYTKFVGVLNAKKAKLRELRDRLSKQKSAEVPXXXXXXSTDNT 761
           L QSE+ + EK EFESEIY KF+GVLN+KKAKLRELRD+LSKQ++          STD T
Sbjct: 174 LEQSERSTNEKMEFESEIYAKFLGVLNSKKAKLRELRDQLSKQETTGKALMEEEDSTDKT 233

Query: 762 ESFXXXXXXXXXXXXXXXXLVGTSKDVPPSRACGRKRK 875
           ES+                L  T KDVP +   GR RK
Sbjct: 234 ESYHTGSDAEGGEEEPEKNLTSTCKDVPAAAGRGRGRK 271


>gb|EOY05932.1| DNA ligase iv-binding protein XRCC4 isoform 3 [Theobroma cacao]
          Length = 277

 Score =  308 bits (789), Expect = 3e-81
 Identities = 164/279 (58%), Positives = 189/279 (67%), Gaps = 14/279 (5%)
 Frame = +3

Query: 81  EPSMEDSPRHTCLKLEITTRSDSGTQEVERLFVKGTWYSSRFDLAITDGLNAWTCNASEE 260
           E S   + RHTCLKLEI +         E +FVKGTW+ + FD++ITDGL+AW CNA+EE
Sbjct: 2   ETSSSSTTRHTCLKLEIPS--------TEPIFVKGTWFDAHFDISITDGLHAWVCNATEE 53

Query: 261 EIQERASQWDQPVVEYIELAEKYLGFQQPGSVYGFSDAEGGCKRLSWTFEKEGIKLEWRW 440
           E++ERA+QWDQPV EYIELAE+YLGFQQ GSVY F+DA    KRLSW FEKEG KLEWRW
Sbjct: 54  EVKERAAQWDQPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLEWRW 113

Query: 441 KCQPSPFSKKTTADILDFLMDANIGLS--------------EEVVRKTDSFEKLKVEAEK 578
           K +PSP S+K T  ILDFLMDANI LS              EEV RKT SFEKLKVEAEK
Sbjct: 114 KFRPSPDSQKITGGILDFLMDANIRLSKHVCVCVCVCVCLQEEVFRKTQSFEKLKVEAEK 173

Query: 579 CLAQSEQLSKEKAEFESEIYTKFVGVLNAKKAKLRELRDRLSKQKSAEVPXXXXXXSTDN 758
           CL QSE+ + EK EFESEIY KF+GVLN+KKAKLRELRD+LSKQ++          STD 
Sbjct: 174 CLEQSERSTNEKMEFESEIYAKFLGVLNSKKAKLRELRDQLSKQETTGKALMEEEDSTDK 233

Query: 759 TESFXXXXXXXXXXXXXXXXLVGTSKDVPPSRACGRKRK 875
           TES+                L  T KDVP +   GR RK
Sbjct: 234 TESYHTGSDAEGGEEEPEKNLTSTCKDVPAAAGRGRGRK 272


>dbj|BAF03494.1| XRCC4 homolog [Populus nigra]
          Length = 255

 Score =  304 bits (779), Expect = 4e-80
 Identities = 158/256 (61%), Positives = 183/256 (71%)
 Frame = +3

Query: 105 RHTCLKLEITTRSDSGTQEVERLFVKGTWYSSRFDLAITDGLNAWTCNASEEEIQERASQ 284
           RHTCLKLEI           E +F+KGTW+   F+L+ITDGLN+W CNA+EEE++ RA+Q
Sbjct: 7   RHTCLKLEIP----------EPIFIKGTWFPFHFNLSITDGLNSWFCNATEEEVRGRAAQ 56

Query: 285 WDQPVVEYIELAEKYLGFQQPGSVYGFSDAEGGCKRLSWTFEKEGIKLEWRWKCQPSPFS 464
           WDQPV  YI+LAEK+LGFQ PGSVY F+DA  G KRLSWTFEKEG KLEWRWKCQPSP +
Sbjct: 57  WDQPVSTYIQLAEKHLGFQIPGSVYKFTDAGEGNKRLSWTFEKEGTKLEWRWKCQPSPDT 116

Query: 465 KKTTADILDFLMDANIGLSEEVVRKTDSFEKLKVEAEKCLAQSEQLSKEKAEFESEIYTK 644
           KKTT  ILDFLMDANI LSEEVVRKT SFE+LK EAEKCLAQSE+ + +K EFE+ +Y K
Sbjct: 117 KKTTTLILDFLMDANIRLSEEVVRKTQSFERLKGEAEKCLAQSEKFNSQKMEFEAAVYAK 176

Query: 645 FVGVLNAKKAKLRELRDRLSKQKSAEVPXXXXXXSTDNTESFXXXXXXXXXXXXXXXXLV 824
           F+GVLN+KK KLRELRD+LSK K            +D TESF                L 
Sbjct: 177 FLGVLNSKKRKLRELRDQLSK-KEISGESAQEGEDSDKTESFDRGSDDEKSVEKPREKLA 235

Query: 825 GTSKDVPPSRACGRKR 872
           GTSKD PP R   RK+
Sbjct: 236 GTSKDPPPRRGYVRKK 251


>ref|XP_004495346.1| PREDICTED: DNA repair protein XRCC4-like [Cicer arietinum]
          Length = 255

 Score =  299 bits (765), Expect = 2e-78
 Identities = 154/259 (59%), Positives = 185/259 (71%), Gaps = 3/259 (1%)
 Frame = +3

Query: 90  MEDSPRHTCLKLEITTRSDSGTQEVERLFVKGTWYSSRFDLAITDGLNAWTCNASEEEIQ 269
           ME+  RHTCLKL+I           E +FVKGTW+ + F+L+ITDG  AW C ASEEE++
Sbjct: 1   MEEKKRHTCLKLQINGE--------EAIFVKGTWFDTHFNLSITDGFTAWYCYASEEELK 52

Query: 270 ERASQWDQPVVEYIELAEKYLGFQQPGSVYGFSDAEGGCKRLSWTFEKEGIKLEWRWKCQ 449
           +RA+QWDQPV EY++L+E YLGFQQ GS+Y F+DA  G KRLSWTFEK G+ L WRWKC 
Sbjct: 53  QRAAQWDQPVSEYVQLSESYLGFQQHGSIYAFADAGDGHKRLSWTFEKGGMTLHWRWKCM 112

Query: 450 PSPFSKKTTADILDFLMDANIGLSEEVVRKTDSFEKLKVEAEKCLAQSEQLSKEKAEFES 629
            SP  KKTTA ILDFLMDANI LSEEVVRKTD FEK KVEAEKCLAQSE+++ E+ +FES
Sbjct: 113 QSPDCKKTTAQILDFLMDANIRLSEEVVRKTDLFEKTKVEAEKCLAQSERIANERVDFES 172

Query: 630 EIYTKFVGVLNAKKAKLRELRDRLSKQKSAEVPXXXXXXSTDNTESFXXXXXXXXXXXXX 809
           +IYTKF+GVLN+KKAKLRELRD+LSKQ +A+         TD TESF             
Sbjct: 173 QIYTKFLGVLNSKKAKLRELRDQLSKQDNAD--KSPQEEDTDKTESFDEESDNDLSNEDP 230

Query: 810 XXXLVGTSKDV---PPSRA 857
              +  +SK V    PSR+
Sbjct: 231 QKCITSSSKKVGANKPSRS 249


>ref|XP_003590794.1| DNA repair protein XRCC4 [Medicago truncatula]
           gi|355479842|gb|AES61045.1| DNA repair protein XRCC4
           [Medicago truncatula]
          Length = 256

 Score =  295 bits (756), Expect = 2e-77
 Identities = 149/261 (57%), Positives = 187/261 (71%)
 Frame = +3

Query: 90  MEDSPRHTCLKLEITTRSDSGTQEVERLFVKGTWYSSRFDLAITDGLNAWTCNASEEEIQ 269
           ME+  RHTCLKL++T        E E +FVKGTW+++ F+L+ITDG  +W CNASE+E++
Sbjct: 1   MEEKKRHTCLKLQLT--------EEESIFVKGTWFNTHFNLSITDGSTSWHCNASEDEVK 52

Query: 270 ERASQWDQPVVEYIELAEKYLGFQQPGSVYGFSDAEGGCKRLSWTFEKEGIKLEWRWKCQ 449
           +RA+QWDQPV EY+EL+E+YLGFQQP SVY F+DA    KRLSWTFEK G+ L WRWKC 
Sbjct: 53  QRAAQWDQPVEEYVELSERYLGFQQPESVYAFADAGDAHKRLSWTFEKGGMTLHWRWKCM 112

Query: 450 PSPFSKKTTADILDFLMDANIGLSEEVVRKTDSFEKLKVEAEKCLAQSEQLSKEKAEFES 629
            SP  KKTTA+ILDFLMDANI LSEEVV KT+ FEK KVEAEKCLAQSE+++ E+ EFES
Sbjct: 113 KSPDCKKTTAEILDFLMDANIRLSEEVVIKTELFEKTKVEAEKCLAQSERIANERVEFES 172

Query: 630 EIYTKFVGVLNAKKAKLRELRDRLSKQKSAEVPXXXXXXSTDNTESFXXXXXXXXXXXXX 809
           +IYTKF+GVLN+KKAKLRELRD+LSKQ + +          + TESF             
Sbjct: 173 QIYTKFLGVLNSKKAKLRELRDQLSKQGNGD-KSPQEEEDPEKTESFDEESDDGKSDEDP 231

Query: 810 XXXLVGTSKDVPPSRACGRKR 872
              +  +SKD   ++    +R
Sbjct: 232 QKCITSSSKDAGATKRSRPRR 252


>ref|XP_006298402.1| hypothetical protein CARUB_v10014474mg [Capsella rubella]
           gi|482567111|gb|EOA31300.1| hypothetical protein
           CARUB_v10014474mg [Capsella rubella]
          Length = 249

 Score =  293 bits (751), Expect = 7e-77
 Identities = 152/256 (59%), Positives = 179/256 (69%)
 Frame = +3

Query: 105 RHTCLKLEITTRSDSGTQEVERLFVKGTWYSSRFDLAITDGLNAWTCNASEEEIQERASQ 284
           +HTCL+LEI+          + +FVKGTWY SRFD+++TDG ++W CNA+EEE+ ERA+Q
Sbjct: 8   KHTCLRLEISG--------ADPIFVKGTWYHSRFDISVTDGSSSWICNATEEEVAERAAQ 59

Query: 285 WDQPVVEYIELAEKYLGFQQPGSVYGFSDAEGGCKRLSWTFEKEGIKLEWRWKCQPSPFS 464
           WDQPV EY+ELAE+YLGFQQP S+YGFSDA  GCKRLSWTFEKEG KLEWRWKC+PS  S
Sbjct: 60  WDQPVSEYLELAEQYLGFQQPDSIYGFSDALEGCKRLSWTFEKEGTKLEWRWKCKPSHDS 119

Query: 465 KKTTADILDFLMDANIGLSEEVVRKTDSFEKLKVEAEKCLAQSEQLSKEKAEFESEIYTK 644
           KK T  +LDFLM++NI LSEEVV KT SFEK+K EAEKCLAQ ++L KEK EFE   Y K
Sbjct: 120 KKITVGVLDFLMESNIRLSEEVVNKTRSFEKMKSEAEKCLAQGQKLCKEKTEFEDATYAK 179

Query: 645 FVGVLNAKKAKLRELRDRLSKQKSAEVPXXXXXXSTDNTESFXXXXXXXXXXXXXXXXLV 824
           F+ VLNAKKAKLR LRD+    K+ E        STD TESF                  
Sbjct: 180 FLSVLNAKKAKLRALRDKEDSGKAVE-----EEESTDKTESFDDSERSDNEQGEEV---- 230

Query: 825 GTSKDVPPSRACGRKR 872
             SK    S+A GRKR
Sbjct: 231 -DSKKATSSKARGRKR 245


>ref|XP_002315726.1| predicted protein [Populus trichocarpa]
          Length = 233

 Score =  291 bits (745), Expect = 4e-76
 Identities = 147/222 (66%), Positives = 172/222 (77%)
 Frame = +3

Query: 105 RHTCLKLEITTRSDSGTQEVERLFVKGTWYSSRFDLAITDGLNAWTCNASEEEIQERASQ 284
           RHTCLKLEI           E +F+KGTW+   F+L+ITDGLN+W CNA+EEE+++RA+Q
Sbjct: 7   RHTCLKLEIP----------EPIFIKGTWFPFHFNLSITDGLNSWFCNATEEEVRDRAAQ 56

Query: 285 WDQPVVEYIELAEKYLGFQQPGSVYGFSDAEGGCKRLSWTFEKEGIKLEWRWKCQPSPFS 464
           WDQPV  YI+LAEK+LGFQ PGSVY F+DA  G KRLSWTFEKEG KLEWRWKCQPSP +
Sbjct: 57  WDQPVSTYIQLAEKHLGFQIPGSVYKFTDAGEGNKRLSWTFEKEGTKLEWRWKCQPSPDT 116

Query: 465 KKTTADILDFLMDANIGLSEEVVRKTDSFEKLKVEAEKCLAQSEQLSKEKAEFESEIYTK 644
           KKTT  ILDFLMDANI LSEEVVRKT SFE+LK EAEKCLAQSE+ + +K EFE+ +Y K
Sbjct: 117 KKTTTLILDFLMDANIRLSEEVVRKTQSFEQLKGEAEKCLAQSEKFNSQKMEFEAAVYAK 176

Query: 645 FVGVLNAKKAKLRELRDRLSKQKSAEVPXXXXXXSTDNTESF 770
           F+GVLN+KK KLRELRD+LSK K            +D TESF
Sbjct: 177 FLGVLNSKKRKLRELRDQLSK-KEISGESAQEEEDSDKTESF 217


>ref|XP_004136882.1| PREDICTED: DNA repair protein XRCC4-like [Cucumis sativus]
           gi|449478860|ref|XP_004155437.1| PREDICTED: DNA repair
           protein XRCC4-like [Cucumis sativus]
          Length = 233

 Score =  287 bits (735), Expect = 5e-75
 Identities = 141/225 (62%), Positives = 172/225 (76%)
 Frame = +3

Query: 96  DSPRHTCLKLEITTRSDSGTQEVERLFVKGTWYSSRFDLAITDGLNAWTCNASEEEIQER 275
           D+ RHTCLKLE+ T +     E   +FVKGTW   RFDL+ITDG +AWTC+A+E+E++ R
Sbjct: 2   DAIRHTCLKLEVPTNAQPN--ERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLR 59

Query: 276 ASQWDQPVVEYIELAEKYLGFQQPGSVYGFSDAEGGCKRLSWTFEKEGIKLEWRWKCQPS 455
           A+QWDQ   +Y+ LAE+YLGFQQPGS+Y F+DA  G KRLSWTF+KEG+KLEWRWKCQP+
Sbjct: 60  AAQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLSWTFDKEGMKLEWRWKCQPA 119

Query: 456 PFSKKTTADILDFLMDANIGLSEEVVRKTDSFEKLKVEAEKCLAQSEQLSKEKAEFESEI 635
             +K TTA IL+FLMDANI LSEEVVRK  S E+LK E+EKCLAQSE++  EK EFE+ I
Sbjct: 120 SDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAI 179

Query: 636 YTKFVGVLNAKKAKLRELRDRLSKQKSAEVPXXXXXXSTDNTESF 770
           Y KF+ VLNAKKAKLRE RD+LS+Q            S+D TESF
Sbjct: 180 YAKFLNVLNAKKAKLREYRDQLSRQTITGSKLKQEEYSSDKTESF 224