BLASTX nr result
ID: Rauwolfia21_contig00015987
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00015987
(986 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA95319.1| retrotransposon protein, putative, unclassified [... 132 3e-64
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group] 126 1e-61
gb|AAP53789.1| retrotransposon protein, putative, unclassified [... 129 4e-61
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group] 127 7e-60
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g... 127 2e-59
gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japo... 127 2e-59
gb|ABG22014.1| retrotransposon protein, putative, unclassified [... 127 2e-58
emb|CAH66715.1| OSIGBa0118P15.5 [Oryza sativa Indica Group] 125 2e-58
emb|CAH67116.1| H0502G05.7 [Oryza sativa Indica Group] 108 6e-58
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e... 115 8e-58
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69... 115 3e-57
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group] 127 3e-57
ref|XP_004296329.1| PREDICTED: uncharacterized protein LOC101295... 113 1e-56
ref|NP_001057345.1| Os06g0266100 [Oryza sativa Japonica Group] g... 102 2e-56
gb|ADB85304.1| putative retrotransposon protein [Phyllostachys e... 112 7e-56
emb|CAN82562.1| hypothetical protein VITISV_014148 [Vitis vinifera] 113 9e-56
emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group] 101 1e-55
emb|CAE03436.2| OSJNBa0032F06.19 [Oryza sativa Japonica Group] 105 1e-55
ref|NP_001054298.1| Os04g0682600 [Oryza sativa Japonica Group] g... 105 1e-55
gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sa... 101 1e-54
>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 955
Score = 132 bits (333), Expect(3) = 3e-64
Identities = 61/130 (46%), Positives = 88/130 (67%)
Frame = +1
Query: 469 LSLQPFRQQPLTLWKHSQLFPKYFGSYRIVQRIGEVAYKLELPKESRIHPVFHISQLKRR 648
L LQP+RQ + +L KY+G +++++++G VAY+L+LP+E+ IHPVFH+SQLK+
Sbjct: 824 LKLQPYRQNAFGIRGSLKLRGKYYGPFKVLEKVGAVAYRLQLPEEAAIHPVFHVSQLKKH 883
Query: 649 IGTDQVTQLDLPEVNTEGQILV*PAAVLSRRLVKKRSKPVVQWLIQWSNLAPEDATWEFA 828
+GT V +LP V +GQI P AVL RR++ + + V QWLI WSNL P +ATWE A
Sbjct: 884 LGTHAVPMPNLPAVGPDGQIKTEPVAVLQRRMIPRNNVAVTQWLILWSNLTPAEATWEDA 943
Query: 829 DEFLKKWPDF 858
K +P+F
Sbjct: 944 SYIQKVFPNF 953
Score = 98.6 bits (244), Expect(3) = 3e-64
Identities = 50/113 (44%), Positives = 70/113 (61%)
Frame = +2
Query: 140 DQCLEMYLRCFTSQRPHFWYKFLALAEWWYNTSYYSAIKMSPFEALFRFKHMGFGEGIVV 319
+QCLE YLRC T Q P W ++ALAEWWYNT+Y++AI+M+PF+AL+ + E V
Sbjct: 712 NQCLESYLRCMTFQEPQNWCSWIALAEWWYNTTYHTAIQMTPFKALYGYSPPQISEFSVP 771
Query: 320 EDIKHVGVSQMIEERKRLDSILKQNLHAAINRMKQMADKKGSERTYEVGD*VY 478
D+ +EE++ + LK ++ A RMK AD+ +ER EVGD VY
Sbjct: 772 CDVSQ-EARVTLEEKETIVQKLKASMEDAQRRMKYYADRNRTERKLEVGDMVY 823
Score = 63.2 bits (152), Expect(3) = 3e-64
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = +3
Query: 3 GLSECISNDRDKVFTSLFWQELFATDGVKQKMSSAYHPQTDGQTERIN 146
G+ I DRD+VFTS F+QE+F + V+ + S+AYHPQTDGQTER+N
Sbjct: 665 GMPIAIVTDRDRVFTSTFFQEVFKSQKVQLRFSTAYHPQTDGQTERVN 712
>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1475
Score = 126 bits (317), Expect(3) = 1e-61
Identities = 57/130 (43%), Positives = 86/130 (66%)
Frame = +1
Query: 469 LSLQPFRQQPLTLWKHSQLFPKYFGSYRIVQRIGEVAYKLELPKESRIHPVFHISQLKRR 648
L L+P+RQ + +L K++G ++++Q+IG++AYKL+LP +++IHPVFH+SQLK+
Sbjct: 1344 LKLKPYRQSAFGIRGSLKLRSKFYGPFKVLQKIGQLAYKLQLPDDAQIHPVFHVSQLKKH 1403
Query: 649 IGTDQVTQLDLPEVNTEGQILV*PAAVLSRRLVKKRSKPVVQWLIQWSNLAPEDATWEFA 828
+G + +LP V +GQI P AVL RR+V ++ V QWLI W NL+P +ATWE A
Sbjct: 1404 LGKHAIPMSNLPSVGPDGQIKTEPLAVLQRRMVPRKGVAVTQWLILWQNLSPAEATWEDA 1463
Query: 829 DEFLKKWPDF 858
+P F
Sbjct: 1464 SVIQAMFPSF 1473
Score = 100 bits (250), Expect(3) = 1e-61
Identities = 53/113 (46%), Positives = 73/113 (64%)
Frame = +2
Query: 140 DQCLEMYLRCFTSQRPHFWYKFLALAEWWYNTSYYSAIKMSPFEALFRFKHMGFGEGIVV 319
+QCLE YLR T Q PH WY +LALAEWWYNT++++AI+M+PF+A++ + E V
Sbjct: 1232 NQCLESYLRNMTFQEPHKWYSWLALAEWWYNTTFHTAIQMTPFKAMYGYSPPQINEFSVP 1291
Query: 320 EDIKHVGVSQMIEERKRLDSILKQNLHAAINRMKQMADKKGSERTYEVGD*VY 478
+I IEE++ + + LK +L A +RMK ADK +ER EVGD VY
Sbjct: 1292 CNISE-EARVTIEEKEAILNKLKNSLADAQHRMKYFADKNRTERNLEVGDMVY 1343
Score = 58.2 bits (139), Expect(3) = 1e-61
Identities = 26/48 (54%), Positives = 34/48 (70%)
Frame = +3
Query: 3 GLSECISNDRDKVFTSLFWQELFATDGVKQKMSSAYHPQTDGQTERIN 146
G+ I DRD++FTS +QE+F VK + S+AYHPQ DGQTER+N
Sbjct: 1185 GMPMVIITDRDRIFTSSLFQEIFKAMKVKLRFSTAYHPQMDGQTERVN 1232
>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1611
Score = 129 bits (325), Expect(3) = 4e-61
Identities = 58/130 (44%), Positives = 87/130 (66%)
Frame = +1
Query: 469 LSLQPFRQQPLTLWKHSQLFPKYFGSYRIVQRIGEVAYKLELPKESRIHPVFHISQLKRR 648
L LQP+RQ + + +L KY+G +++++++G VAYKL+LP + IHPVFH+SQLK+
Sbjct: 1480 LKLQPYRQVAMGIRGSLKLRSKYYGPFKVIEKMGAVAYKLQLPDGAGIHPVFHVSQLKKH 1539
Query: 649 IGTDQVTQLDLPEVNTEGQILV*PAAVLSRRLVKKRSKPVVQWLIQWSNLAPEDATWEFA 828
+G + +LP + +GQI PAAVL RR++ + ++PV QWLI W NL P +ATWE A
Sbjct: 1540 LGARAIPMPNLPAIGPDGQIKTEPAAVLQRRMIPRHNEPVTQWLILWENLTPAEATWEDA 1599
Query: 829 DEFLKKWPDF 858
+P+F
Sbjct: 1600 SYIQAAFPNF 1609
Score = 90.5 bits (223), Expect(3) = 4e-61
Identities = 47/113 (41%), Positives = 70/113 (61%)
Frame = +2
Query: 140 DQCLEMYLRCFTSQRPHFWYKFLALAEWWYNTSYYSAIKMSPFEALFRFKHMGFGEGIVV 319
+QCLE YLR T Q P W+ +LALAEWWYNT+Y+++I+M+PF+AL+ + E +
Sbjct: 1368 NQCLESYLRSMTFQEPQKWFSWLALAEWWYNTTYHTSIQMTPFQALYGYPPPQITEFAIP 1427
Query: 320 EDIKHVGVSQMIEERKRLDSILKQNLHAAINRMKQMADKKGSERTYEVGD*VY 478
++ +E++ + LK ++ A R+K ADK SERT E+GD VY
Sbjct: 1428 CNMSE-EARVTLEDKALILQKLKSSIGEAQRRIKFYADKGRSERTLELGDMVY 1479
Score = 63.9 bits (154), Expect(3) = 4e-61
Identities = 29/48 (60%), Positives = 37/48 (77%)
Frame = +3
Query: 3 GLSECISNDRDKVFTSLFWQELFATDGVKQKMSSAYHPQTDGQTERIN 146
G+ I DRD+VFTS F+QE+F T VK + S+A+HPQTDGQTER+N
Sbjct: 1321 GMPMVIVTDRDRVFTSNFFQEIFKTQKVKLRFSTAHHPQTDGQTERVN 1368
>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
Length = 1586
Score = 127 bits (319), Expect(3) = 7e-60
Identities = 59/130 (45%), Positives = 84/130 (64%)
Frame = +1
Query: 469 LSLQPFRQQPLTLWKHSQLFPKYFGSYRIVQRIGEVAYKLELPKESRIHPVFHISQLKRR 648
L LQP+RQ + +L K++G ++I++++G VAYKL+LP+ S IHPVFH+SQLK+
Sbjct: 1455 LKLQPYRQTAFGIRGSLKLRSKFYGPFKIMEKVGRVAYKLQLPEGSNIHPVFHVSQLKKH 1514
Query: 649 IGTDQVTQLDLPEVNTEGQILV*PAAVLSRRLVKKRSKPVVQWLIQWSNLAPEDATWEFA 828
IG+ V +LP V +GQI P AVL RR++ + V QWL+ W NL+P +ATWE A
Sbjct: 1515 IGSRAVPMANLPSVGPDGQIKTEPVAVLKRRMIPRGGVAVTQWLVLWHNLSPSEATWEDA 1574
Query: 829 DEFLKKWPDF 858
+P F
Sbjct: 1575 SMIQSMFPSF 1584
Score = 92.4 bits (228), Expect(3) = 7e-60
Identities = 49/113 (43%), Positives = 69/113 (61%)
Frame = +2
Query: 140 DQCLEMYLRCFTSQRPHFWYKFLALAEWWYNTSYYSAIKMSPFEALFRFKHMGFGEGIVV 319
+QCLE YLR T Q P W+ +LALAEWWYNT+Y+++I+M+PF+AL+ + E V
Sbjct: 1343 NQCLESYLRSMTFQEPTRWHSWLALAEWWYNTTYHTSIQMTPFQALYGYPPPQINEFSVP 1402
Query: 320 EDIKHVGVSQMIEERKRLDSILKQNLHAAINRMKQMADKKGSERTYEVGD*VY 478
++ IE++ + LK +L A R+K AD+ SERT VGD VY
Sbjct: 1403 CNVSE-EARVTIEQKDAIIQKLKYSLTEAQRRIKHYADRNRSERTLAVGDMVY 1454
Score = 60.1 bits (144), Expect(3) = 7e-60
Identities = 26/48 (54%), Positives = 36/48 (75%)
Frame = +3
Query: 3 GLSECISNDRDKVFTSLFWQELFATDGVKQKMSSAYHPQTDGQTERIN 146
G+ I DRD++FTS +QE+F + V+ K S++YHPQTDGQTER+N
Sbjct: 1296 GMPMAIITDRDRIFTSQLFQEIFKSMKVRLKFSTSYHPQTDGQTERVN 1343
>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
Japonica Group]
Length = 866
Score = 127 bits (320), Expect(3) = 2e-59
Identities = 62/130 (47%), Positives = 86/130 (66%)
Frame = +1
Query: 469 LSLQPFRQQPLTLWKHSQLFPKYFGSYRIVQRIGEVAYKLELPKESRIHPVFHISQLKRR 648
L +QP+R L L +L +Y+G +R+++RIG VAYKL LP S+IH VFH+SQLK+
Sbjct: 735 LKMQPYRHNSLGLHSSLKLHSRYYGPFRVLERIGSVAYKLLLPVTSQIHHVFHVSQLKKH 794
Query: 649 IGTDQVTQLDLPEVNTEGQILV*PAAVLSRRLVKKRSKPVVQWLIQWSNLAPEDATWEFA 828
+G+ V + LP ++ EG+IL P AVL RRL+ + ++PVVQW I W+NL ATWE A
Sbjct: 795 LGSRAVPEQGLPLIDAEGRILSTPLAVLDRRLIPRNNEPVVQWKIHWANLPESAATWEDA 854
Query: 829 DEFLKKWPDF 858
K +P F
Sbjct: 855 AFITKVFPSF 864
Score = 85.9 bits (211), Expect(3) = 2e-59
Identities = 47/113 (41%), Positives = 64/113 (56%)
Frame = +2
Query: 140 DQCLEMYLRCFTSQRPHFWYKFLALAEWWYNTSYYSAIKMSPFEALFRFKHMGFGEGIVV 319
+QCLE YLRC TS +P W L AEWWYNT++++++ MSP++AL K E ++
Sbjct: 623 NQCLENYLRCMTSSKPRKWKALLPHAEWWYNTTFHTSLGMSPYQALHGIKPPLLAELLLP 682
Query: 320 EDIKHVGVSQMIEERKRLDSILKQNLHAAINRMKQMADKKGSERTYEVGD*VY 478
+ G E + L +K +L A RMK AD+ ERT EVGD VY
Sbjct: 683 GSLLE-GERNKQEAKAALLETIKSHLVKAQARMKYFADQHRQERTLEVGDMVY 734
Score = 64.7 bits (156), Expect(3) = 2e-59
Identities = 29/48 (60%), Positives = 36/48 (75%)
Frame = +3
Query: 3 GLSECISNDRDKVFTSLFWQELFATDGVKQKMSSAYHPQTDGQTERIN 146
GL I +DRD++FTS W+E+F GVK SSAYHPQTDGQ+ER+N
Sbjct: 576 GLPTVIVSDRDRIFTSSTWKEVFEKAGVKLHFSSAYHPQTDGQSERVN 623
>gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japonica Group]
Length = 645
Score = 127 bits (320), Expect(3) = 2e-59
Identities = 62/130 (47%), Positives = 86/130 (66%)
Frame = +1
Query: 469 LSLQPFRQQPLTLWKHSQLFPKYFGSYRIVQRIGEVAYKLELPKESRIHPVFHISQLKRR 648
L +QP+R L L +L +Y+G +R+++RIG VAYKL LP S+IH VFH+SQLK+
Sbjct: 514 LKMQPYRHNSLGLHSSLKLHSRYYGPFRVLERIGSVAYKLLLPVTSQIHHVFHVSQLKKH 573
Query: 649 IGTDQVTQLDLPEVNTEGQILV*PAAVLSRRLVKKRSKPVVQWLIQWSNLAPEDATWEFA 828
+G+ V + LP ++ EG+IL P AVL RRL+ + ++PVVQW I W+NL ATWE A
Sbjct: 574 LGSRAVPEQGLPLIDAEGRILSTPLAVLDRRLIPRNNEPVVQWKIHWANLPESAATWEDA 633
Query: 829 DEFLKKWPDF 858
K +P F
Sbjct: 634 AFITKVFPSF 643
Score = 85.9 bits (211), Expect(3) = 2e-59
Identities = 47/113 (41%), Positives = 64/113 (56%)
Frame = +2
Query: 140 DQCLEMYLRCFTSQRPHFWYKFLALAEWWYNTSYYSAIKMSPFEALFRFKHMGFGEGIVV 319
+QCLE YLRC TS +P W L AEWWYNT++++++ MSP++AL K E ++
Sbjct: 402 NQCLENYLRCMTSSKPRKWKALLPHAEWWYNTTFHTSLGMSPYQALHGIKPPLLAELLLP 461
Query: 320 EDIKHVGVSQMIEERKRLDSILKQNLHAAINRMKQMADKKGSERTYEVGD*VY 478
+ G E + L +K +L A RMK AD+ ERT EVGD VY
Sbjct: 462 GSLLE-GERNKQEAKAALLETIKSHLVKAQARMKYFADQHRQERTLEVGDMVY 513
Score = 64.7 bits (156), Expect(3) = 2e-59
Identities = 29/48 (60%), Positives = 36/48 (75%)
Frame = +3
Query: 3 GLSECISNDRDKVFTSLFWQELFATDGVKQKMSSAYHPQTDGQTERIN 146
GL I +DRD++FTS W+E+F GVK SSAYHPQTDGQ+ER+N
Sbjct: 355 GLPTVIVSDRDRIFTSSTWKEVFEKAGVKLHFSSAYHPQTDGQSERVN 402
>gb|ABG22014.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1422
Score = 127 bits (319), Expect(3) = 2e-58
Identities = 57/118 (48%), Positives = 81/118 (68%)
Frame = +1
Query: 469 LSLQPFRQQPLTLWKHSQLFPKYFGSYRIVQRIGEVAYKLELPKESRIHPVFHISQLKRR 648
L LQP+RQ L + + +L KY+G +++Q+IG VAYKL+LP E+ IHPVFH+SQLK+
Sbjct: 1302 LKLQPYRQAALGIRESLKLRSKYYGPSKVIQKIGRVAYKLQLPAEALIHPVFHVSQLKKH 1361
Query: 649 IGTDQVTQLDLPEVNTEGQILV*PAAVLSRRLVKKRSKPVVQWLIQWSNLAPEDATWE 822
+G+ V +LP EGQI P A++ RR++ +R V QWL+ W NL+P DATW+
Sbjct: 1362 LGSHAVPMANLPAAGPEGQIKTEPVAIMRRRMIPRRGVAVTQWLVFWKNLSPADATWK 1419
Score = 85.1 bits (209), Expect(3) = 2e-58
Identities = 49/113 (43%), Positives = 63/113 (55%)
Frame = +2
Query: 140 DQCLEMYLRCFTSQRPHFWYKFLALAEWWYNTSYYSAIKMSPFEALFRFKHMGFGEGIVV 319
+QCLE YLR T Q P WY +L LAE WYNT+Y++AI+M+PF+AL +
Sbjct: 1211 NQCLESYLRNMTFQEPRNWYSWLPLAELWYNTTYHTAIQMTPFKALGQ------------ 1258
Query: 320 EDIKHVGVSQMIEERKRLDSILKQNLHAAINRMKQMADKKGSERTYEVGD*VY 478
H G +I++ LK +L A RMK AD+ ERT EVGD VY
Sbjct: 1259 ---SHFGREAIIQK-------LKDSLDVAQKRMKHFADRNRMERTLEVGDMVY 1301
Score = 62.8 bits (151), Expect(3) = 2e-58
Identities = 27/48 (56%), Positives = 35/48 (72%)
Frame = +3
Query: 3 GLSECISNDRDKVFTSLFWQELFATDGVKQKMSSAYHPQTDGQTERIN 146
G+ I DRD++FTS +QE+F GV + S+AYHPQTDGQTER+N
Sbjct: 1164 GMPTAIITDRDRIFTSNLYQEIFKAKGVHLRFSTAYHPQTDGQTERVN 1211
>emb|CAH66715.1| OSIGBa0118P15.5 [Oryza sativa Indica Group]
Length = 1434
Score = 125 bits (313), Expect(3) = 2e-58
Identities = 59/116 (50%), Positives = 83/116 (71%)
Frame = +1
Query: 469 LSLQPFRQQPLTLWKHSQLFPKYFGSYRIVQRIGEVAYKLELPKESRIHPVFHISQLKRR 648
L +QP+RQ L +L K++G +RI++RIG+VAY L+LP+E+ IHPVFH+SQLK+
Sbjct: 1319 LKMQPYRQNTFGLRGSLKLRAKFYGPFRILKRIGKVAYHLQLPEEAGIHPVFHVSQLKKH 1378
Query: 649 IGTDQVTQLDLPEVNTEGQILV*PAAVLSRRLVKKRSKPVVQWLIQWSNLAPEDAT 816
+G V +LP V+ +G I P AVL+RR+V +R++PV QWL+ W NL PEDAT
Sbjct: 1379 VGNLAVPLPNLPLVDEDGNIKAEPVAVLARRVVPRRNEPVTQWLVHWENLTPEDAT 1434
Score = 95.9 bits (237), Expect(3) = 2e-58
Identities = 50/117 (42%), Positives = 74/117 (63%), Gaps = 4/117 (3%)
Frame = +2
Query: 140 DQCLEMYLRCFTSQRPHFWYKFLALAEWWYNTSYYSAIKMSPFEALFRFKHMGFGE---- 307
+QC+E YLRC Q P W+K+L AEWWYNTSY+++++++P+EAL+ GE
Sbjct: 1207 NQCVEAYLRCMVFQEPRDWHKWLPTAEWWYNTSYHTSLQVTPYEALYGVHPPQNGEQAIP 1266
Query: 308 GIVVEDIKHVGVSQMIEERKRLDSILKQNLHAAINRMKQMADKKGSERTYEVGD*VY 478
G V E+I+ ++R+ L LK NL A NR+K+ AD+ SER+++ GD VY
Sbjct: 1267 GNVTEEIRITA-----QQREELMLRLKDNLLRAQNRIKKFADRLRSERSFQEGDMVY 1318
Score = 53.9 bits (128), Expect(3) = 2e-58
Identities = 24/48 (50%), Positives = 34/48 (70%)
Frame = +3
Query: 3 GLSECISNDRDKVFTSLFWQELFATDGVKQKMSSAYHPQTDGQTERIN 146
G+ I DRDK+FTS +Q +F + G + S++YHPQ+DGQTER+N
Sbjct: 1160 GMPLVIVFDRDKIFTSDLFQNVFKSMGTTLRFSTSYHPQSDGQTERVN 1207
>emb|CAH67116.1| H0502G05.7 [Oryza sativa Indica Group]
Length = 642
Score = 108 bits (271), Expect(3) = 6e-58
Identities = 57/128 (44%), Positives = 76/128 (59%)
Frame = +1
Query: 469 LSLQPFRQQPLTLWKHSQLFPKYFGSYRIVQRIGEVAYKLELPKESRIHPVFHISQLKRR 648
L LQP+ Q + + + +L KYFG Y++ +IG VAY+L+LP + IHPVFH+SQLK
Sbjct: 427 LKLQPYVQTSVAVRANHKLAFKYFGPYQVTAKIGTVAYQLQLPSSTSIHPVFHVSQLKSA 486
Query: 649 IGTDQVTQLDLPEVNTEGQILV*PAAVLSRRLVKKRSKPVVQWLIQWSNLAPEDATWEFA 828
IG Q LP Q+ P +L RRL K+ + V Q LIQWS PEDATWE
Sbjct: 487 IGFTGPVQHQLPASTAPLQV---PLRILDRRLTKRGNSAVAQVLIQWSASVPEDATWEDL 543
Query: 829 DEFLKKWP 852
D+ ++P
Sbjct: 544 DDLRSRFP 551
Score = 102 bits (255), Expect(3) = 6e-58
Identities = 50/113 (44%), Positives = 76/113 (67%)
Frame = +2
Query: 140 DQCLEMYLRCFTSQRPHFWYKFLALAEWWYNTSYYSAIKMSPFEALFRFKHMGFGEGIVV 319
+QCLE+YLRCF P W +L LAE+WYNTS++S+++ +PFE L+ FG G
Sbjct: 316 NQCLEIYLRCFVHSVPTKWAAWLHLAEYWYNTSFHSSVQATPFEVLYGHSPSHFGIG--S 373
Query: 320 EDIKHVGVSQMIEERKRLDSILKQNLHAAINRMKQMADKKGSERTYEVGD*VY 478
+D ++Q ++ER+ + ++++Q+LH A +MK ADKK S R++EVGD VY
Sbjct: 374 QDCAIPDLAQWLKERRLMQNLVQQHLHRAQQQMKHFADKKRSFRSFEVGDWVY 426
Score = 61.6 bits (148), Expect(3) = 6e-58
Identities = 29/48 (60%), Positives = 33/48 (68%)
Frame = +3
Query: 3 GLSECISNDRDKVFTSLFWQELFATDGVKQKMSSAYHPQTDGQTERIN 146
GL I +DRDKVFTS W+ LF G K SSAYHPQ+D QTER+N
Sbjct: 269 GLPLVIISDRDKVFTSQLWEHLFEGAGTKLHFSSAYHPQSDAQTERVN 316
>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1348
Score = 115 bits (288), Expect(3) = 8e-58
Identities = 54/130 (41%), Positives = 82/130 (63%)
Frame = +1
Query: 469 LSLQPFRQQPLTLWKHSQLFPKYFGSYRIVQRIGEVAYKLELPKESRIHPVFHISQLKRR 648
L +QP+R L + +L ++G +R++QR+G+VAY+L+LP+ IHPVFHISQLK+
Sbjct: 1205 LKMQPYRTTAFGLKQALKLTSIFYGPFRVMQRVGKVAYRLQLPEGVGIHPVFHISQLKQH 1264
Query: 649 IGTDQVTQLDLPEVNTEGQILV*PAAVLSRRLVKKRSKPVVQWLIQWSNLAPEDATWEFA 828
G + + +LP V +G+I P+ V R + + V QWL+QW+NL PEDA+WE A
Sbjct: 1265 CGANSIPSPELPMVGKDGKIKTEPSLVKETRAMPRNHTLVTQWLVQWANLPPEDASWEDA 1324
Query: 829 DEFLKKWPDF 858
+P+F
Sbjct: 1325 SFIKSTFPEF 1334
Score = 94.0 bits (232), Expect(3) = 8e-58
Identities = 48/113 (42%), Positives = 68/113 (60%)
Frame = +2
Query: 140 DQCLEMYLRCFTSQRPHFWYKFLALAEWWYNTSYYSAIKMSPFEALFRFKHMGFGEGIVV 319
+QC+E YLRC Q P W +L LAEWWYNT++++A+K+SPF+AL+ F E + +
Sbjct: 1093 NQCVESYLRCMAMQEPKKWVSWLPLAEWWYNTTFHTALKLSPFQALYGFPPPLINE-VAI 1151
Query: 320 EDIKHVGVSQMIEERKRLDSILKQNLHAAINRMKQMADKKGSERTYEVGD*VY 478
+ +EE++ + LK+NL A RMK+ AD SER VGD VY
Sbjct: 1152 PGPEDNEARDFLEEKQVMLRRLKENLAQAQTRMKKYADLNRSERQLTVGDMVY 1204
Score = 63.5 bits (153), Expect(3) = 8e-58
Identities = 28/48 (58%), Positives = 36/48 (75%)
Frame = +3
Query: 3 GLSECISNDRDKVFTSLFWQELFATDGVKQKMSSAYHPQTDGQTERIN 146
G I +DRD++FTS WQELF + V+ + S+AYHPQTDGQTER+N
Sbjct: 1046 GFPIAIVSDRDRIFTSKLWQELFKSMKVQLRFSTAYHPQTDGQTERVN 1093
>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 1499
Score = 115 bits (289), Expect(3) = 3e-57
Identities = 59/130 (45%), Positives = 85/130 (65%)
Frame = +1
Query: 469 LSLQPFRQQPLTLWKHSQLFPKYFGSYRIVQRIGEVAYKLELPKESRIHPVFHISQLKRR 648
+ LQP+RQQ + + + +L PKYFG Y+I+ R GEVAYKL LP S++HPVFH+SQLK
Sbjct: 1370 VKLQPYRQQSVVMRANQKLSPKYFGPYKIIDRCGEVAYKLALPSYSQVHPVFHVSQLKVL 1429
Query: 649 IGTDQVTQLDLPEVNTEGQILV*PAAVLSRRLVKKRSKPVVQWLIQWSNLAPEDATWEFA 828
+G T + LP V + V P V+ R++V ++ K V + L++WSN E+ATWEF
Sbjct: 1430 VGNVSTT-VHLPSVMQDVFEKV-PEKVVERKMVNRQGKAVTKVLVKWSNEPLEEATWEFL 1487
Query: 829 DEFLKKWPDF 858
+ K +P+F
Sbjct: 1488 FDLQKTFPEF 1497
Score = 93.2 bits (230), Expect(3) = 3e-57
Identities = 49/116 (42%), Positives = 75/116 (64%), Gaps = 3/116 (2%)
Frame = +2
Query: 140 DQCLEMYLRCFTSQRPHFWYKFLALAEWWYNTSYYSAIKMSPFEALFRF---KHMGFGEG 310
++CLE YLRC RP W K+LALAE+WYNT+Y+S+ +M+PFE ++ H+ + G
Sbjct: 1258 NRCLETYLRCMCHDRPQLWSKWLALAEYWYNTNYHSSSRMTPFEIVYGQVPPVHLPYLPG 1317
Query: 311 IVVEDIKHVGVSQMIEERKRLDSILKQNLHAAINRMKQMADKKGSERTYEVGD*VY 478
+ K V++ ++ER+ + LK +L A +RMKQ AD+ +ER +E+GD VY
Sbjct: 1318 ----ESKVAVVARSLQEREDMLLFLKFHLMRAQHRMKQFADQHRTEREFEIGDYVY 1369
Score = 62.0 bits (149), Expect(3) = 3e-57
Identities = 30/52 (57%), Positives = 36/52 (69%)
Frame = +3
Query: 3 GLSECISNDRDKVFTSLFWQELFATDGVKQKMSSAYHPQTDGQTERINVWRC 158
G I +DRD VFTS FW+E F GV K++SAYHPQ+DGQTE +N RC
Sbjct: 1211 GCPTSIVSDRDVVFTSEFWREFFTLQGVALKLTSAYHPQSDGQTEVVN--RC 1260
>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
Length = 1311
Score = 127 bits (320), Expect(3) = 3e-57
Identities = 64/130 (49%), Positives = 83/130 (63%)
Frame = +1
Query: 469 LSLQPFRQQPLTLWKHSQLFPKYFGSYRIVQRIGEVAYKLELPKESRIHPVFHISQLKRR 648
L +QP+R L L +L KY+G +R+++RIG VAYKL LP S+IHPVFH+SQLK+
Sbjct: 1180 LKMQPYRHNSLGLHSSLKLHSKYYGPFRVLERIGSVAYKLLLPASSQIHPVFHVSQLKKH 1239
Query: 649 IGTDQVTQLDLPEVNTEGQILV*PAAVLSRRLVKKRSKPVVQWLIQWSNLAPEDATWEFA 828
IG V + LP + G IL P AVL RRL+ + + PVVQW +QW+NL ATWE A
Sbjct: 1240 IGPKVVPEPGLPLTDDNGNILSQPTAVLERRLIPQNNAPVVQWKVQWANLPLSAATWEDA 1299
Query: 829 DEFLKKWPDF 858
K +P F
Sbjct: 1300 AFISKVFPAF 1309
Score = 78.2 bits (191), Expect(3) = 3e-57
Identities = 41/113 (36%), Positives = 59/113 (52%)
Frame = +2
Query: 140 DQCLEMYLRCFTSQRPHFWYKFLALAEWWYNTSYYSAIKMSPFEALFRFKHMGFGEGIVV 319
+QCLE YLRC T +P W LA A+WWYNTS+++ + M+P++AL E +
Sbjct: 1068 NQCLENYLRCMTFTKPKKWKSLLAYAKWWYNTSFHTTLGMTPYQALHGVPPPLLAESFLS 1127
Query: 320 EDIKHVGVSQMIEERKRLDSILKQNLHAAINRMKQMADKKGSERTYEVGD*VY 478
+ E + + + +K +L A RMK AD +ER VGD VY
Sbjct: 1128 PSL-FTDARNKAEAKSVITAAIKSSLLKAQARMKHFADMNRTERVLTVGDMVY 1179
Score = 65.1 bits (157), Expect(3) = 3e-57
Identities = 29/48 (60%), Positives = 36/48 (75%)
Frame = +3
Query: 3 GLSECISNDRDKVFTSLFWQELFATDGVKQKMSSAYHPQTDGQTERIN 146
GL I +DRD++FTS W+++F GVK SSAYHPQTDGQTER+N
Sbjct: 1021 GLPAVIVSDRDRIFTSQTWKDVFEKAGVKLHFSSAYHPQTDGQTERVN 1068
>ref|XP_004296329.1| PREDICTED: uncharacterized protein LOC101295505 [Fragaria vesca
subsp. vesca]
Length = 2814
Score = 113 bits (282), Expect(3) = 1e-56
Identities = 52/126 (41%), Positives = 77/126 (61%)
Frame = +1
Query: 469 LSLQPFRQQPLTLWKHSQLFPKYFGSYRIVQRIGEVAYKLELPKESRIHPVFHISQLKRR 648
L LQP++Q + ++L +Y+G + ++++IG VAYKL+LP +RIH VFH+S LK++
Sbjct: 2001 LKLQPYKQHSMQRGVFNKLSARYYGPFEVLEKIGSVAYKLKLPPTARIHNVFHVSLLKKK 2060
Query: 649 IGTDQVTQLDLPEVNTEGQILV*PAAVLSRRLVKKRSKPVVQWLIQWSNLAPEDATWEFA 828
+G DLP + PAAV RR+VKK QWL+ W PE+ATWEFA
Sbjct: 2061 LGDQTPVLADLPPIIDPTNPKWAPAAVFGRRMVKKAGAAATQWLVHWIGTTPEEATWEFA 2120
Query: 829 DEFLKK 846
+E ++
Sbjct: 2121 EEMQRR 2126
Score = 92.8 bits (229), Expect(3) = 1e-56
Identities = 50/117 (42%), Positives = 72/117 (61%), Gaps = 4/117 (3%)
Frame = +2
Query: 140 DQCLEMYLRCFTSQRPHFWYKFLALAEWWYNTSYYSAIKMSPFEALFRFKHMGFGEGIVV 319
++ LE YLRC ++P W K LA AEWWYN++Y++AI MSPFEA + G+ V+
Sbjct: 1889 NRTLEQYLRCVVGEKPQDWVKCLAWAEWWYNSAYHTAIAMSPFEARY-----GYPPPPVI 1943
Query: 320 EDIKHVGV----SQMIEERKRLDSILKQNLHAAINRMKQMADKKGSERTYEVGD*VY 478
I V + + +R+ L ++LK+NL A RMK DK+ +ER++EVGD VY
Sbjct: 1944 PYIPGSTVIAQADEQLRKREELLALLKRNLQRAQARMKHFHDKRHTERSFEVGDMVY 2000
Score = 62.8 bits (151), Expect(3) = 1e-56
Identities = 27/48 (56%), Positives = 34/48 (70%)
Frame = +3
Query: 3 GLSECISNDRDKVFTSLFWQELFATDGVKQKMSSAYHPQTDGQTERIN 146
G+ + I +DRD +F SLFW+ FA G K SSAYHPQ+DGQTE +N
Sbjct: 1842 GMPDNIISDRDPIFMSLFWEAFFALQGTKLSKSSAYHPQSDGQTENLN 1889
>ref|NP_001057345.1| Os06g0266100 [Oryza sativa Japonica Group]
gi|113595385|dbj|BAF19259.1| Os06g0266100, partial
[Oryza sativa Japonica Group]
Length = 399
Score = 102 bits (253), Expect(3) = 2e-56
Identities = 57/141 (40%), Positives = 81/141 (57%), Gaps = 1/141 (0%)
Frame = +1
Query: 469 LSLQPFRQQPLTLWKHSQLFPKYFGSYRIVQRIGEVAYKLELPKESRIHPVFHISQLKRR 648
+ LQP+ Q + + +L +YFG ++++Q+ G VAYKL+LP S IHPVFH+SQLK
Sbjct: 209 IKLQPYVQSSVAARANHKLAFRYFGPFQVIQKFGSVAYKLQLPTTSSIHPVFHVSQLKAA 268
Query: 649 IGTDQVTQLDLPEVNTEGQILV*PAAVLSRRLVKKRSKPVVQWLIQWSNLAPEDATWEFA 828
G LP + Q P +L RL+KK + V Q LIQWS+ A EDATWE
Sbjct: 269 KGFQGALHSTLPSSDDAFQY---PIMLLDNRLIKKGNTTVSQVLIQWSDTAVEDATWEDL 325
Query: 829 DEFLKKWPD-FCWES*GQDSF 888
++ ++P+ W GQ +F
Sbjct: 326 EDLRARFPEALAW---GQATF 343
Score = 100 bits (248), Expect(3) = 2e-56
Identities = 52/113 (46%), Positives = 74/113 (65%)
Frame = +2
Query: 140 DQCLEMYLRCFTSQRPHFWYKFLALAEWWYNTSYYSAIKMSPFEALFRFKHMGFGEGIVV 319
+QCLE+YLRCFT P W +L LAE+WYNT+++SA+ SPFE L+ F GI
Sbjct: 98 NQCLEIYLRCFTHATPSKWAVWLHLAEFWYNTAFHSALNTSPFEVLYGHPPRYF--GIHS 155
Query: 320 EDIKHVGVSQMIEERKRLDSILKQNLHAAINRMKQMADKKGSERTYEVGD*VY 478
ED + ++ER+ + S+++Q+L+ A MK MADKK S R++E+GD VY
Sbjct: 156 EDCAIPELQVWLKERRLMHSLIQQHLNRAQQHMKNMADKKRSFRSFELGDWVY 208
Score = 65.9 bits (159), Expect(3) = 2e-56
Identities = 27/48 (56%), Positives = 37/48 (77%)
Frame = +3
Query: 3 GLSECISNDRDKVFTSLFWQELFATDGVKQKMSSAYHPQTDGQTERIN 146
GL + I +DRDK+FTS W++LF G + +S+AYHPQ+DGQTER+N
Sbjct: 51 GLPQTIISDRDKIFTSQLWEQLFTRSGTQLHLSTAYHPQSDGQTERVN 98
>gb|ADB85304.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 335
Score = 112 bits (281), Expect(3) = 7e-56
Identities = 53/116 (45%), Positives = 78/116 (67%)
Frame = +1
Query: 469 LSLQPFRQQPLTLWKHSQLFPKYFGSYRIVQRIGEVAYKLELPKESRIHPVFHISQLKRR 648
L +QP+R L +L K++G +R+++++G VAY+L+LP+ + IHPVFH++QLK+
Sbjct: 220 LKMQPYRLTAFGLRGSLKLRSKFYGPFRVLEKLGTVAYRLQLPEHTLIHPVFHVNQLKKH 279
Query: 649 IGTDQVTQLDLPEVNTEGQILV*PAAVLSRRLVKKRSKPVVQWLIQWSNLAPEDAT 816
+G+ V LP V G+I P VL RR+V +R++PV Q LIQW NL PEDAT
Sbjct: 280 LGSHAVPLTGLPLVGENGKIKTEPVVVLDRRIVPRRNEPVAQLLIQWLNLGPEDAT 335
Score = 99.4 bits (246), Expect(3) = 7e-56
Identities = 48/113 (42%), Positives = 73/113 (64%)
Frame = +2
Query: 140 DQCLEMYLRCFTSQRPHFWYKFLALAEWWYNTSYYSAIKMSPFEALFRFKHMGFGEGIVV 319
+QCLE YLR T Q P W +L LAEWWYNT+Y++++K++PF+AL+ + GE +
Sbjct: 108 NQCLEAYLRSMTFQEPREWMNWLTLAEWWYNTTYHTSLKVTPFQALYGYPPPQVGELSIP 167
Query: 320 EDIKHVGVSQMIEERKRLDSILKQNLHAAINRMKQMADKKGSERTYEVGD*VY 478
++ +E+++++ LK NLH A +RMK ADK +ER ++VGD VY
Sbjct: 168 CNVSE-EARITVEQKEQMLEQLKSNLHNAQDRMKHYADKSRTERQFQVGDMVY 219
Score = 54.3 bits (129), Expect(3) = 7e-56
Identities = 25/48 (52%), Positives = 34/48 (70%)
Frame = +3
Query: 3 GLSECISNDRDKVFTSLFWQELFATDGVKQKMSSAYHPQTDGQTERIN 146
G+ I DRD++FTS +QE+F V ++S+AYHPQTD QTER+N
Sbjct: 61 GMPITIVTDRDRIFTSHLFQEIFKMLKVTLRLSTAYHPQTDRQTERVN 108
>emb|CAN82562.1| hypothetical protein VITISV_014148 [Vitis vinifera]
Length = 1384
Score = 113 bits (283), Expect(3) = 9e-56
Identities = 53/118 (44%), Positives = 80/118 (67%)
Frame = +1
Query: 469 LSLQPFRQQPLTLWKHSQLFPKYFGSYRIVQRIGEVAYKLELPKESRIHPVFHISQLKRR 648
L LQP+RQQ + +L +++G Y+I QRIG+VAYKL LP+ S+IHP+FH+S LK++
Sbjct: 1224 LKLQPYRQQSVFCXASQKLASRFYGPYQIEQRIGKVAYKLNLPEGSKIHPIFHVSLLKKK 1283
Query: 649 IGTDQVTQLDLPEVNTEGQILV*PAAVLSRRLVKKRSKPVVQWLIQWSNLAPEDATWE 822
+G T ++LP + EG+I++ P +L R VKK S+ + L++W L +DATWE
Sbjct: 1284 LGEPNNTTVELPLTDDEGEIVLEPEGILDTRWVKKGSRIFEESLVKWKRLPLDDATWE 1341
Score = 87.0 bits (214), Expect(3) = 9e-56
Identities = 48/121 (39%), Positives = 66/121 (54%), Gaps = 8/121 (6%)
Frame = +2
Query: 140 DQCLEMYLRCFTSQRPHFWYKFLALAEWWYNTSYYSAIKMSPFEALFRFKHMGFGEGIVV 319
++C+E YLRC+ P W FL AE+WYNT+Y+++ M+PF+AL+ G +
Sbjct: 1112 NRCVEQYLRCYAHHHPRKWSFFLPWAEFWYNTTYHASTGMTPFQALY---------GRLP 1162
Query: 320 EDIKHV--------GVSQMIEERKRLDSILKQNLHAAINRMKQMADKKGSERTYEVGD*V 475
I H V Q + R + LK NLHAA NRMKQ+AD K Y+VGD V
Sbjct: 1163 PTIPHYLMGTTPIHAVDQNLASRNAILRQLKTNLHAATNRMKQVADSKRRNIEYQVGDMV 1222
Query: 476 Y 478
+
Sbjct: 1223 F 1223
Score = 65.5 bits (158), Expect(3) = 9e-56
Identities = 31/52 (59%), Positives = 38/52 (73%)
Frame = +3
Query: 3 GLSECISNDRDKVFTSLFWQELFATDGVKQKMSSAYHPQTDGQTERINVWRC 158
G+ + I +DRD VF S FWQELF G + KMSS+YHPQTDGQ+E +N RC
Sbjct: 1065 GMPKSIISDRDPVFMSQFWQELFKLSGTQLKMSSSYHPQTDGQSEVVN--RC 1114
>emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group]
Length = 1602
Score = 101 bits (251), Expect(3) = 1e-55
Identities = 51/129 (39%), Positives = 77/129 (59%)
Frame = +1
Query: 469 LSLQPFRQQPLTLWKHSQLFPKYFGSYRIVQRIGEVAYKLELPKESRIHPVFHISQLKRR 648
L LQP+ Q + + +L KY+G ++++ ++G VAYKL+LP+ S +HPVFH+S LK
Sbjct: 1392 LKLQPYVQSSVAPRANHKLAFKYYGPFQVIDKLGTVAYKLQLPETSSVHPVFHVSLLKPA 1451
Query: 649 IGTDQVTQLDLPEVNTEGQILV*PAAVLSRRLVKKRSKPVVQWLIQWSNLAPEDATWEFA 828
G Q L LP Q+ P A+L +RL KK + + Q LI WS+ PE ATWE
Sbjct: 1452 KGFTQPAFLQLPSEVVSWQL---PLAILDQRLAKKGNSVITQVLIHWSHTVPEQATWEDL 1508
Query: 829 DEFLKKWPD 855
++ ++P+
Sbjct: 1509 EDLKTRFPN 1517
Score = 98.2 bits (243), Expect(3) = 1e-55
Identities = 48/113 (42%), Positives = 71/113 (62%)
Frame = +2
Query: 140 DQCLEMYLRCFTSQRPHFWYKFLALAEWWYNTSYYSAIKMSPFEALFRFKHMGFGEGIVV 319
+QCLE+YLRCF P WY +L LAE+WYN++Y+S++ +PFE L+ + F GI
Sbjct: 1281 NQCLEIYLRCFVHSTPSKWYSWLHLAEYWYNSTYHSSLGTTPFEVLYGYPPNHF--GISS 1338
Query: 320 EDIKHVGVSQMIEERKRLDSILKQNLHAAINRMKQMADKKGSERTYEVGD*VY 478
D +S + +RK + +++Q+LH A +MK ADKK S R + +GD VY
Sbjct: 1339 RDCAIPELSVWLRDRKFMQQLVQQHLHRAQQQMKHFADKKRSFRQFTIGDWVY 1391
Score = 66.2 bits (160), Expect(3) = 1e-55
Identities = 29/48 (60%), Positives = 36/48 (75%)
Frame = +3
Query: 3 GLSECISNDRDKVFTSLFWQELFATDGVKQKMSSAYHPQTDGQTERIN 146
GL + I +DRDK+FTS W++LF G K SSAYHPQ+DGQTER+N
Sbjct: 1234 GLPQTIVSDRDKIFTSQLWEQLFLRAGTKLHYSSAYHPQSDGQTERVN 1281
>emb|CAE03436.2| OSJNBa0032F06.19 [Oryza sativa Japonica Group]
Length = 1575
Score = 105 bits (261), Expect(3) = 1e-55
Identities = 51/128 (39%), Positives = 78/128 (60%)
Frame = +1
Query: 469 LSLQPFRQQPLTLWKHSQLFPKYFGSYRIVQRIGEVAYKLELPKESRIHPVFHISQLKRR 648
+ LQP+ QQ + + +L KY+G ++++QRIG VAY+L+LP S IHPV H+SQLK+
Sbjct: 1395 MKLQPYIQQSVMTRSNRKLSFKYYGPFQVLQRIGLVAYRLQLPAHSLIHPVVHVSQLKKA 1454
Query: 649 IGTDQVTQLDLPEVNTEGQILV*PAAVLSRRLVKKRSKPVVQWLIQWSNLAPEDATWEFA 828
+ + Q LP +N + L P +L R +++ SK + Q LI+WS ++ TWE
Sbjct: 1455 LAPSEAVQPSLPVLNPDAGHLAIPIKILDHRSIRRGSKMIKQVLIRWSGVSSSADTWESL 1514
Query: 829 DEFLKKWP 852
DE K+P
Sbjct: 1515 DEMQAKFP 1522
Score = 93.2 bits (230), Expect(3) = 1e-55
Identities = 48/113 (42%), Positives = 69/113 (61%)
Frame = +2
Query: 140 DQCLEMYLRCFTSQRPHFWYKFLALAEWWYNTSYYSAIKMSPFEALFRFKHMGFGEGIVV 319
+QC+EM+LRCF P W +LALA++WYNTS++SA+ M+PFE LF K FG
Sbjct: 1283 NQCVEMFLRCFVHSCPSRWKHWLALAQYWYNTSFHSALGMTPFEVLFGHKPRYFGLSTSS 1342
Query: 320 EDIKHVGVSQMIEERKRLDSILKQNLHAAINRMKQMADKKGSERTYEVGD*VY 478
D ++ + ER +++++ +L A RMK AD K SER + VGD V+
Sbjct: 1343 VDAPG-DLASWLSERNDMNTLIHHHLLRAQQRMKSQADSKRSERCFAVGDWVF 1394
Score = 67.4 bits (163), Expect(3) = 1e-55
Identities = 29/48 (60%), Positives = 38/48 (79%)
Frame = +3
Query: 3 GLSECISNDRDKVFTSLFWQELFATDGVKQKMSSAYHPQTDGQTERIN 146
GL + I +DRD+VFTS W+ELF G + +MSS+YHPQ+DGQTER+N
Sbjct: 1236 GLPQAIVSDRDRVFTSSLWKELFRRAGTQLRMSSSYHPQSDGQTERVN 1283
>ref|NP_001054298.1| Os04g0682600 [Oryza sativa Japonica Group]
gi|113565869|dbj|BAF16212.1| Os04g0682600, partial
[Oryza sativa Japonica Group]
Length = 395
Score = 105 bits (261), Expect(3) = 1e-55
Identities = 51/128 (39%), Positives = 78/128 (60%)
Frame = +1
Query: 469 LSLQPFRQQPLTLWKHSQLFPKYFGSYRIVQRIGEVAYKLELPKESRIHPVFHISQLKRR 648
+ LQP+ QQ + + +L KY+G ++++QRIG VAY+L+LP S IHPV H+SQLK+
Sbjct: 215 MKLQPYIQQSVMTRSNRKLSFKYYGPFQVLQRIGLVAYRLQLPAHSLIHPVVHVSQLKKA 274
Query: 649 IGTDQVTQLDLPEVNTEGQILV*PAAVLSRRLVKKRSKPVVQWLIQWSNLAPEDATWEFA 828
+ + Q LP +N + L P +L R +++ SK + Q LI+WS ++ TWE
Sbjct: 275 LAPSEAVQPSLPVLNPDAGHLAIPIKILDHRSIRRGSKMIKQVLIRWSGVSSSADTWESL 334
Query: 829 DEFLKKWP 852
DE K+P
Sbjct: 335 DEMQAKFP 342
Score = 93.2 bits (230), Expect(3) = 1e-55
Identities = 48/113 (42%), Positives = 69/113 (61%)
Frame = +2
Query: 140 DQCLEMYLRCFTSQRPHFWYKFLALAEWWYNTSYYSAIKMSPFEALFRFKHMGFGEGIVV 319
+QC+EM+LRCF P W +LALA++WYNTS++SA+ M+PFE LF K FG
Sbjct: 103 NQCVEMFLRCFVHSCPSRWKHWLALAQYWYNTSFHSALGMTPFEVLFGHKPRYFGLSTSS 162
Query: 320 EDIKHVGVSQMIEERKRLDSILKQNLHAAINRMKQMADKKGSERTYEVGD*VY 478
D ++ + ER +++++ +L A RMK AD K SER + VGD V+
Sbjct: 163 VDAPG-DLASWLSERNDMNTLIHHHLLRAQQRMKSQADSKRSERCFAVGDWVF 214
Score = 67.4 bits (163), Expect(3) = 1e-55
Identities = 29/48 (60%), Positives = 38/48 (79%)
Frame = +3
Query: 3 GLSECISNDRDKVFTSLFWQELFATDGVKQKMSSAYHPQTDGQTERIN 146
GL + I +DRD+VFTS W+ELF G + +MSS+YHPQ+DGQTER+N
Sbjct: 56 GLPQAIVSDRDRVFTSSLWKELFRRAGTQLRMSSSYHPQSDGQTERVN 103
>gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1608
Score = 101 bits (251), Expect(3) = 1e-54
Identities = 50/113 (44%), Positives = 72/113 (63%)
Frame = +2
Query: 140 DQCLEMYLRCFTSQRPHFWYKFLALAEWWYNTSYYSAIKMSPFEALFRFKHMGFGEGIVV 319
+QCLE+YLRCF PH W +L LAE+WYNTS++S + +PFE L+ + FG G+
Sbjct: 1297 NQCLEIYLRCFVHAAPHKWSSWLYLAEFWYNTSFHSTLNKTPFEVLYGYTPSHFGIGL-- 1354
Query: 320 EDIKHVGVSQMIEERKRLDSILKQNLHAAINRMKQMADKKGSERTYEVGD*VY 478
+D + + + ERK + +L+Q+L+ A +MK ADKK S R + VGD VY
Sbjct: 1355 DDCQIADLHEWHTERKFMQQLLQQHLNRAQQQMKHQADKKRSFRQFAVGDWVY 1407
Score = 93.2 bits (230), Expect(3) = 1e-54
Identities = 53/141 (37%), Positives = 81/141 (57%), Gaps = 1/141 (0%)
Frame = +1
Query: 469 LSLQPFRQQPLTLWKHSQLFPKYFGSYRIVQRIGEVAYKLELPKESRIHPVFHISQLKRR 648
L LQP+ Q + +L +Y+G ++++ R+G VAY ++LP S IHPVFH+SQLK
Sbjct: 1408 LKLQPYVQTFVAQRACHKLAFRYYGPFQVMSRVGTVAYHIQLPATSSIHPVFHVSQLKAA 1467
Query: 649 IGTDQVTQLDLPEVNTEGQILV*PAAVLSRRLVKKRSKPVVQWLIQWSNLAPEDATWEFA 828
+G + Q +LP T L P L +RLVKK ++ V+Q L W + +P ++TWE
Sbjct: 1468 VGFSKKVQDELP---TSLGALQVPFQFLDKRLVKKGNRSVLQLLTHWYHSSPSESTWEDM 1524
Query: 829 DEFLKKWP-DFCWES*GQDSF 888
++ ++P W GQ SF
Sbjct: 1525 EDLFARFPRALAW---GQASF 1542
Score = 67.8 bits (164), Expect(3) = 1e-54
Identities = 30/48 (62%), Positives = 36/48 (75%)
Frame = +3
Query: 3 GLSECISNDRDKVFTSLFWQELFATDGVKQKMSSAYHPQTDGQTERIN 146
GL I +DRDK+FTS FW +LF+ G MSSAYHPQ+DGQTER+N
Sbjct: 1250 GLPRAIISDRDKIFTSQFWDQLFSKFGTDLHMSSAYHPQSDGQTERVN 1297