BLASTX nr result
ID: Rauwolfia21_contig00015828
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00015828
(849 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera] 189 6e-50
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera] 184 1e-46
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi... 178 3e-45
emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera] 168 5e-44
emb|CAN81001.1| hypothetical protein VITISV_006992 [Vitis vinifera] 181 2e-43
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] 160 4e-43
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera] 162 6e-43
emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera] 179 9e-43
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera] 179 1e-42
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi... 172 2e-42
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 177 3e-42
gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|3860380... 177 3e-42
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 156 1e-41
emb|CAN75292.1| hypothetical protein VITISV_014745 [Vitis vinifera] 162 2e-41
ref|XP_006365584.1| PREDICTED: uncharacterized protein LOC102598... 174 4e-41
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab... 167 4e-41
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi... 166 6e-41
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 172 1e-40
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 172 2e-40
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 157 1e-39
>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
Length = 1316
Score = 189 bits (481), Expect(2) = 6e-50
Identities = 92/180 (51%), Positives = 122/180 (67%)
Frame = +1
Query: 310 WRKAMDAKVAALENNHTWTYAELLAGQKPIKSKWVYKVKYHADGSIEHYKAHLVAKGCSQ 489
WR+AM ++ ALE N TW +L +K I KW+YK+KY+ADGSIE YKA LVA+G +Q
Sbjct: 819 WREAMAKEIEALETNQTWKVVDLPPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQ 878
Query: 490 VDREDSTKTYVPVDKMTTVRCXXXXXXXXXWSLY*MDVNNVFLH*DLDEEIYMEPPPGFK 669
++ D + + PV KMT+VRC W L+ MDVNN FLH DL+EE+YM+ P GFK
Sbjct: 879 IEGIDYQEXFSPVAKMTSVRCFLAVXVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFK 938
Query: 670 PPKSTYYCRIRKSIYGLQQAGRNWFAKLTITL*SLRFEQSLIEHSFFFYKQGNITLALLV 849
C+++KS+YGL+QA R WFAKLT L F+QSL ++S F Y++GNI + LLV
Sbjct: 939 ATGKNKVCKLQKSLYGLKQASRQWFAKLTTALKEYGFQQSLADYSLFTYRRGNIVMNLLV 998
Score = 35.4 bits (80), Expect(2) = 6e-50
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +2
Query: 98 RPPLRLQDYVCHATDRPSC----QSPVPRFSSGMLYLLHHHLSYANISASHKDFLATLGS 265
+ P LQDY+C++ S S + + SG Y + ++++Y S H+ FLA +
Sbjct: 744 KEPRHLQDYICYSARSLSTLCSKASSIQKVPSGKPYPIANYVTYTKFSVGHRAFLAXINI 803
Query: 266 TPELTT 283
E T
Sbjct: 804 EKEPRT 809
>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
Length = 1813
Score = 184 bits (468), Expect(2) = 1e-46
Identities = 88/182 (48%), Positives = 117/182 (64%)
Frame = +1
Query: 304 PEWRKAMDAKVAALENNHTWTYAELLAGQKPIKSKWVYKVKYHADGSIEHYKAHLVAKGC 483
P WR+AM ++ ALE N+TW L G KPI +WVYK+KYH+DG+IE YKA LVAKG
Sbjct: 1230 PRWRQAMSTELQALERNNTWEMVPLPPGHKPIGCRWVYKIKYHSDGTIERYKARLVAKGY 1289
Query: 484 SQVDREDSTKTYVPVDKMTTVRCXXXXXXXXXWSLY*MDVNNVFLH*DLDEEIYMEPPPG 663
+QV D +T+ P K+TT+RC W ++ +DV+N FLH +L EE+YM PPPG
Sbjct: 1290 TQVAGIDYQETFSPTAKLTTLRCLLTVAASRNWYIHQLDVHNAFLHGNLQEEVYMTPPPG 1349
Query: 664 FKPPKSTYYCRIRKSIYGLQQAGRNWFAKLTITL*SLRFEQSLIEHSFFFYKQGNITLAL 843
+ CR+RKSIYGL+QA RNWF+ T T+ S + QS ++S F QGN A+
Sbjct: 1350 LRRQGENLVCRLRKSIYGLKQASRNWFSTFTATVKSAGYIQSKADYSLFTKSQGNKFTAI 1409
Query: 844 LV 849
L+
Sbjct: 1410 LI 1411
Score = 29.6 bits (65), Expect(2) = 1e-46
Identities = 21/59 (35%), Positives = 25/59 (42%)
Frame = +2
Query: 98 RPPLRLQDYVCHATDRPSCQSPVPRFSSGMLYLLHHHLSYANISASHKDFLATLGSTPE 274
+PP DYV A S R G Y L HLS+ S H+ FLA L + E
Sbjct: 1163 QPPAWHHDYVMSAQLNHSSTQSSSR--QGTRYPLSSHLSFFRFSPHHRAFLALLTAQTE 1219
>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1156
Score = 178 bits (452), Expect(2) = 3e-45
Identities = 94/190 (49%), Positives = 116/190 (61%)
Frame = +1
Query: 280 HLRPGVLRPEWRKAMDAKVAALENNHTWTYAELLAGQKPIKSKWVYKVKYHADGSIEHYK 459
H + V W AM +V ALE N TW +L G+ I S+WVYK KY+ADGSIE YK
Sbjct: 641 HFKEAVRIKVWNDAMFKEVDALEINKTWDIVDLPPGKVAIGSQWVYKTKYNADGSIERYK 700
Query: 460 AHLVAKGCSQVDREDSTKTYVPVDKMTTVRCXXXXXXXXXWSLY*MDVNNVFLH*DLDEE 639
A LV +G QV+ ED +T+ PV KMTTVR W +Y MDVNN FLH DLDEE
Sbjct: 701 ARLVVQGNKQVEGEDYNETFAPVVKMTTVRTLLRLVAANQWEVYQMDVNNAFLHGDLDEE 760
Query: 640 IYMEPPPGFKPPKSTYYCRIRKSIYGLQQAGRNWFAKLTITL*SLRFEQSLIEHSFFFYK 819
+YM+ PPGF+ CR+RKS+YGL+QA R WF KL+ L F Q ++SFF Y
Sbjct: 761 VYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDALLRFGFVQGHEDYSFFSYT 820
Query: 820 QGNITLALLV 849
+ I L +LV
Sbjct: 821 RNGIELRVLV 830
Score = 30.8 bits (68), Expect(2) = 3e-45
Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 10/69 (14%)
Frame = +2
Query: 98 RPPLRLQDYVC----------HATDRPSCQSPVPRFSSGMLYLLHHHLSYANISASHKDF 247
R +RLQDYV HA S QS + LY L ++S SA HK F
Sbjct: 570 RQSVRLQDYVLYNATVSPINPHALPDSSSQSSSMVQGTSSLYPLSDYVSDDCFSAGHKAF 629
Query: 248 LATLGSTPE 274
LA + + E
Sbjct: 630 LAAITANDE 638
>emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]
Length = 1498
Score = 168 bits (426), Expect(2) = 5e-44
Identities = 86/183 (46%), Positives = 116/183 (63%), Gaps = 1/183 (0%)
Frame = +1
Query: 304 PEWRKAMDAKVAALENNHTWTYAELLAGQKPIKSKWVYKVKYHADGSIEHYKAHLVAKGC 483
PEW+KAM +++ AL+ N TW+ L AG+ PI +WVYK+K+ +DGSIE YKA LVAKG
Sbjct: 999 PEWQKAMRSELQALQANGTWSLTPLPAGKTPIGYRWVYKIKHRSDGSIERYKARLVAKGF 1058
Query: 484 SQVDREDSTKTYVPVDKMTTVRCXXXXXXXXXWSLY*MDVNNVFLH*DLDEEIYMEPPPG 663
+Q++ D T+ P K+ +VRC S++ MDVNN FLH DL EEIYM PP G
Sbjct: 1059 TQLEGVDYQDTFSPTAKIISVRCLLALAAARGXSIHQMDVNNAFLHGDLHEEIYMSPPLG 1118
Query: 664 F-KPPKSTYYCRIRKSIYGLQQAGRNWFAKLTITL*SLRFEQSLIEHSFFFYKQGNITLA 840
+ + CR+ KS+YGL+QA R WFAK + + S + QS ++S F KQG A
Sbjct: 1119 LRRQGEENLVCRLHKSLYGLKQASRQWFAKFSEAIQSAGYAQSRADYSLFTRKQGKSFTA 1178
Query: 841 LLV 849
LL+
Sbjct: 1179 LLI 1181
Score = 37.0 bits (84), Expect(2) = 5e-44
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +2
Query: 101 PPLRLQDYVCHATDRPSCQSPVPRFSSGMLYLLHHHLSYANISASHKDFLATLGSTPE 274
PP++L DYVC S +P + G Y L +++SY +++ F+A + E
Sbjct: 931 PPIKLHDYVCSHVSSNQSSSLIPGPTKGTRYPLANYVSYHRYKPAYRSFVAQHSAVTE 988
>emb|CAN81001.1| hypothetical protein VITISV_006992 [Vitis vinifera]
Length = 1131
Score = 181 bits (460), Expect = 2e-43
Identities = 87/186 (46%), Positives = 124/186 (66%), Gaps = 1/186 (0%)
Frame = +1
Query: 295 VLRPEWRKAMDAKVAALENNHTWTYAELLAGQKPIKSKWVYKVKYHADGSIEHYKAHLVA 474
VL P+W++AM A++ ALE NHTWT L +G +PI KWVYK+KY++DG++E YKA LVA
Sbjct: 628 VLDPKWQEAMAAELHALEQNHTWTLTPLPSGHRPIGCKWVYKIKYNSDGTVERYKAQLVA 687
Query: 475 KGCSQVDREDSTKTYVPVDKMTTVRCXXXXXXXXXWSLY*MDVNNVFLH*DLDEEIYMEP 654
KG +Q + D +T+ P+ K+TT+RC WS + MDV N FLH DL EE+YM+
Sbjct: 688 KGFTQREGIDYKETFSPMAKLTTIRCLLAIAAVRHWSFHQMDVQNAFLHGDLLEEVYMQL 747
Query: 655 PPGF-KPPKSTYYCRIRKSIYGLQQAGRNWFAKLTITL*SLRFEQSLIEHSFFFYKQGNI 831
PPGF + ++ CR+ KS+YGL+QA R+WF K + T+ F QS+ ++S F GN
Sbjct: 748 PPGFCRQGETLMVCRLNKSLYGLKQASRSWFQKFSATIQQNGFHQSMADYSLFTKISGNS 807
Query: 832 TLALLV 849
+ +L+
Sbjct: 808 FIVVLI 813
>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
Length = 1178
Score = 160 bits (406), Expect(2) = 4e-43
Identities = 81/180 (45%), Positives = 110/180 (61%)
Frame = +1
Query: 310 WRKAMDAKVAALENNHTWTYAELLAGQKPIKSKWVYKVKYHADGSIEHYKAHLVAKGCSQ 489
W+K+M ++ ALE N TWT L G++ + S+WVY+ KY ++G IE K+ LV G Q
Sbjct: 681 WQKSMHEEIRALEENGTWTLEPLPKGKRALGSQWVYRTKYFSNGDIERLKSRLVVLGNHQ 740
Query: 490 VDREDSTKTYVPVDKMTTVRCXXXXXXXXXWSLY*MDVNNVFLH*DLDEEIYMEPPPGFK 669
D +T+ PV KMTTVR W L+ MDV+N FLH DL+EE+YM+ PPGF+
Sbjct: 741 EAGIDYHETFSPVAKMTTVRAFLAIAASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFE 800
Query: 670 PPKSTYYCRIRKSIYGLQQAGRNWFAKLTITL*SLRFEQSLIEHSFFFYKQGNITLALLV 849
CR+RKS+YGL+QA R WF+KL L F QS ++S F Y GN+ + +LV
Sbjct: 801 RSDPNLVCRLRKSLYGLKQAPRCWFSKLVTALKGYGFLQSYSDYSLFTYTTGNVQINVLV 860
Score = 41.6 bits (96), Expect(2) = 4e-43
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Frame = +2
Query: 92 DRRPPLRLQDYVCHAT--DRPSCQSPVPRFSSGMLYLLHHHLSYANISASHKDFLATLGS 265
D+ P + L+D+V H + PS +P P+ SG Y + H+++ N S ++ FLAT+ S
Sbjct: 606 DKFPSVLLRDFVTHTVVAESPSPATPXPQHPSGTPYPIAHYINCDNFSVHYRKFLATIIS 665
Query: 266 T 268
+
Sbjct: 666 S 666
>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
Length = 1450
Score = 162 bits (410), Expect(2) = 6e-43
Identities = 82/180 (45%), Positives = 110/180 (61%)
Frame = +1
Query: 310 WRKAMDAKVAALENNHTWTYAELLAGQKPIKSKWVYKVKYHADGSIEHYKAHLVAKGCSQ 489
W+K+M ++ ALE N TWT L G++ + S+WVY+ KY ++G IE K+ LV G Q
Sbjct: 964 WQKSMHEEIRALEENGTWTLEPLPKGKRALGSQWVYRTKYFSNGDIERLKSRLVVLGNHQ 1023
Query: 490 VDREDSTKTYVPVDKMTTVRCXXXXXXXXXWSLY*MDVNNVFLH*DLDEEIYMEPPPGFK 669
D +T+ PV KMTTVR W L+ MDV+N FLH DL+EE+YM+ PPGF+
Sbjct: 1024 EAGIDYHETFSPVAKMTTVRAFLAIAASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFE 1083
Query: 670 PPKSTYYCRIRKSIYGLQQAGRNWFAKLTITL*SLRFEQSLIEHSFFFYKQGNITLALLV 849
CR+RKS+YGL+QA R WFAKL L F QS +S F Y +GN+ + +LV
Sbjct: 1084 SSDPNLVCRLRKSLYGLKQAPRCWFAKLVTALKGYGFLQSYSNYSLFTYTKGNVQINVLV 1143
Score = 39.3 bits (90), Expect(2) = 6e-43
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +2
Query: 92 DRRPPLRLQDYVCHAT--DRPSCQSPVPRFSSGMLYLLHHHLSYANISASHKDFLATLGS 265
D+ P + L+D+V H + PS +P P+ SG Y + H+++ N S ++ FLA + S
Sbjct: 889 DKFPSVLLRDFVTHTVVAESPSPATPSPQHPSGTPYPIAHYINCDNFSVHYRKFLAAIIS 948
Query: 266 T 268
+
Sbjct: 949 S 949
>emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]
Length = 1039
Score = 179 bits (455), Expect = 9e-43
Identities = 90/186 (48%), Positives = 122/186 (65%), Gaps = 1/186 (0%)
Frame = +1
Query: 295 VLRPEWRKAMDAKVAALENNHTWTYAELLAGQKPIKSKWVYKVKYHADGSIEHYKAHLVA 474
VL P+W++AM A++ ALE NHTWT L +G +PI KWVYK+KY++DG++E YKA LVA
Sbjct: 550 VLDPKWQEAMAAELHALEQNHTWTLTPLPSGHRPIGCKWVYKIKYNSDGTVERYKARLVA 609
Query: 475 KGCSQVDREDSTKTYVPVDKMTTVRCXXXXXXXXXWSLY*MDVNNVFLH*DLDEEIYMEP 654
KG +Q + D +T+ PV K+TTVRC WSL+ MDV N FLH DL EE+YM+
Sbjct: 610 KGFTQREGIDYKETFSPVAKLTTVRCLLAIAAVRHWSLHQMDVQNAFLHGDLLEEVYMQL 669
Query: 655 PPGF-KPPKSTYYCRIRKSIYGLQQAGRNWFAKLTITL*SLRFEQSLIEHSFFFYKQGNI 831
PPGF + ++ CR KS+YGL+QA R+WF K + T+ F QS ++S F GN
Sbjct: 670 PPGFXRQGETPMVCRXNKSLYGLKQASRSWFXKFSATIQQDGFXQSRADYSLFTKISGNS 729
Query: 832 TLALLV 849
+L+
Sbjct: 730 FTXVLI 735
>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
Length = 1461
Score = 179 bits (454), Expect = 1e-42
Identities = 91/186 (48%), Positives = 121/186 (65%), Gaps = 1/186 (0%)
Frame = +1
Query: 295 VLRPEWRKAMDAKVAALENNHTWTYAELLAGQKPIKSKWVYKVKYHADGSIEHYKAHLVA 474
VL P+W++AM A++ ALE NHTWT L G +PI KWVYK+KY++DG++E YKA LVA
Sbjct: 958 VLDPKWQEAMAAELHALEQNHTWTLTPLPYGHRPIGCKWVYKIKYNSDGTVERYKARLVA 1017
Query: 475 KGCSQVDREDSTKTYVPVDKMTTVRCXXXXXXXXXWSLY*MDVNNVFLH*DLDEEIYMEP 654
KG +Q + D +T+ PV K+TTVRC WSL+ MDV N FLH DL EE+YM+
Sbjct: 1018 KGFTQREGIDYKETFSPVAKLTTVRCLLAIAAVRHWSLHQMDVQNAFLHGDLLEEVYMQL 1077
Query: 655 PPGFKPPKST-YYCRIRKSIYGLQQAGRNWFAKLTITL*SLRFEQSLIEHSFFFYKQGNI 831
P GF+ T CR+ KS+YGL+QA R+WF K + T+ F QS ++S F GN
Sbjct: 1078 PLGFRQQGETPMVCRLNKSLYGLKQASRSWFRKFSATIQQDGFHQSRADYSLFTKISGNS 1137
Query: 832 TLALLV 849
A+L+
Sbjct: 1138 FTAVLI 1143
>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 172 bits (436), Expect(2) = 2e-42
Identities = 89/190 (46%), Positives = 117/190 (61%)
Frame = +1
Query: 280 HLRPGVLRPEWRKAMDAKVAALENNHTWTYAELLAGQKPIKSKWVYKVKYHADGSIEHYK 459
H + V W AM +V ALE N TW +L G+ I S+WVYK K++ADG++E YK
Sbjct: 984 HFKEDVKVKVWNDAMYKEVDALEVNKTWDIVDLPTGKVAIGSQWVYKTKFNADGTVERYK 1043
Query: 460 AHLVAKGCSQVDREDSTKTYVPVDKMTTVRCXXXXXXXXXWSLY*MDVNNVFLH*DLDEE 639
A LV +G +Q++ ED T+T+ PV KMTTVR W +Y MDV+N FLH DL+EE
Sbjct: 1044 ARLVVQGNNQIEGEDYTETFAPVVKMTTVRTLLRLVAANQWEVYQMDVHNAFLHGDLEEE 1103
Query: 640 IYMEPPPGFKPPKSTYYCRIRKSIYGLQQAGRNWFAKLTITL*SLRFEQSLIEHSFFFYK 819
+YM+ PPGF+ CR+RKS+YGL+QA R WF KL+ L F Q ++SFF Y
Sbjct: 1104 VYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDALKRFGFIQGYEDYSFFSYS 1163
Query: 820 QGNITLALLV 849
I L +LV
Sbjct: 1164 CKGIELRVLV 1173
Score = 27.7 bits (60), Expect(2) = 2e-42
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 9/66 (13%)
Frame = +2
Query: 104 PLRLQDYVCH----ATDRPSCQSPVPRFSSGML-----YLLHHHLSYANISASHKDFLAT 256
P RL+DY+ + + P SP SS + Y L ++S SA HK FLA
Sbjct: 916 PARLKDYILYNASCTPNTPHVLSPSTSQSSSSIQGNLQYPLTDYISDECFSAGHKVFLAA 975
Query: 257 LGSTPE 274
+ + E
Sbjct: 976 ITANDE 981
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 177 bits (450), Expect = 3e-42
Identities = 87/190 (45%), Positives = 122/190 (64%)
Frame = +1
Query: 280 HLRPGVLRPEWRKAMDAKVAALENNHTWTYAELLAGQKPIKSKWVYKVKYHADGSIEHYK 459
H + +L EW +AM ++ ALE NHTW +L G+K I SKWVYK+KY++DG++E +K
Sbjct: 989 HFKDAILIKEWCEAMSKEIDALEANHTWDITDLPHGKKAISSKWVYKLKYNSDGTLERHK 1048
Query: 460 AHLVAKGCSQVDREDSTKTYVPVDKMTTVRCXXXXXXXXXWSLY*MDVNNVFLH*DLDEE 639
A LV G Q + D +T+ PV K+TTVR W ++ MDV+N FLH DL+EE
Sbjct: 1049 ARLVVMGNHQKEGVDFKETFAPVAKLTTVRTILAVAAAKDWEVHQMDVHNAFLHGDLEEE 1108
Query: 640 IYMEPPPGFKPPKSTYYCRIRKSIYGLQQAGRNWFAKLTITL*SLRFEQSLIEHSFFFYK 819
+YM PPGFK + CR+RKS+YGL+QA R WF+KL+ L ++ F QS ++S F K
Sbjct: 1109 VYMRLPPGFKCSDPSKVCRLRKSLYGLKQAPRCWFSKLSTALRNIGFTQSYEDYSLFSLK 1168
Query: 820 QGNITLALLV 849
G+ + +LV
Sbjct: 1169 NGDTIIHVLV 1178
>gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|38603804|gb|AAR24647.1|
At2g23330 [Arabidopsis thaliana]
gi|110742535|dbj|BAE99183.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 776
Score = 177 bits (450), Expect = 3e-42
Identities = 87/190 (45%), Positives = 122/190 (64%)
Frame = +1
Query: 280 HLRPGVLRPEWRKAMDAKVAALENNHTWTYAELLAGQKPIKSKWVYKVKYHADGSIEHYK 459
H + +L EW +AM ++ ALE NHTW +L G+K I SKWVYK+KY++DG++E +K
Sbjct: 269 HFKDAILIKEWCEAMSKEIDALEANHTWDITDLPHGKKAISSKWVYKLKYNSDGTLERHK 328
Query: 460 AHLVAKGCSQVDREDSTKTYVPVDKMTTVRCXXXXXXXXXWSLY*MDVNNVFLH*DLDEE 639
A LV G Q + D +T+ PV K+TTVR W ++ MDV+N FLH DL+EE
Sbjct: 329 ARLVVMGNHQKEGVDFKETFAPVAKLTTVRTILAVAAAKDWEVHQMDVHNAFLHGDLEEE 388
Query: 640 IYMEPPPGFKPPKSTYYCRIRKSIYGLQQAGRNWFAKLTITL*SLRFEQSLIEHSFFFYK 819
+YM PPGFK + CR+RKS+YGL+QA R WF+KL+ L ++ F QS ++S F K
Sbjct: 389 VYMRLPPGFKCSDPSKVCRLRKSLYGLKQAPRCWFSKLSTALRNIGFTQSYEDYSLFSLK 448
Query: 820 QGNITLALLV 849
G+ + +LV
Sbjct: 449 NGDTIIHVLV 458
>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 156 bits (394), Expect(2) = 1e-41
Identities = 79/180 (43%), Positives = 108/180 (60%)
Frame = +1
Query: 310 WRKAMDAKVAALENNHTWTYAELLAGQKPIKSKWVYKVKYHADGSIEHYKAHLVAKGCSQ 489
W+K+M ++ ALE N TW L G++ + S+WVY+ KY ++G IE K+ LV G Q
Sbjct: 602 WQKSMHEEIRALEENGTWXLEPLPKGKRALGSQWVYRTKYFSNGDIERLKSRLVVLGNHQ 661
Query: 490 VDREDSTKTYVPVDKMTTVRCXXXXXXXXXWSLY*MDVNNVFLH*DLDEEIYMEPPPGFK 669
D +T+ PV KMT VR W L+ MDV+N FLH DL+EE+YM+ PPGF+
Sbjct: 662 EAGIDYHETFSPVAKMTMVRAFLAIAASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFE 721
Query: 670 PPKSTYYCRIRKSIYGLQQAGRNWFAKLTITL*SLRFEQSLIEHSFFFYKQGNITLALLV 849
CR+RKS+YGL+QA R WF+KL L F QS ++S F Y GN+ + +LV
Sbjct: 722 RSDPNLVCRLRKSLYGLKQAPRCWFSKLVTALKGYGFLQSYSDYSLFTYTTGNVQINVLV 781
Score = 41.2 bits (95), Expect(2) = 1e-41
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Frame = +2
Query: 92 DRRPPLRLQDYVCHAT--DRPSCQSPVPRFSSGMLYLLHHHLSYANISASHKDFLATLGS 265
D+ P + L+D+V H + PS +P P+ SG Y + H+++ N S ++ FLAT+ S
Sbjct: 527 DKFPSVLLRDFVTHTVVAESPSPATPSPQHPSGTPYPIAHYINCDNFSVHYRKFLATIIS 586
Query: 266 T 268
+
Sbjct: 587 S 587
>emb|CAN75292.1| hypothetical protein VITISV_014745 [Vitis vinifera]
Length = 1472
Score = 162 bits (409), Expect(2) = 2e-41
Identities = 83/183 (45%), Positives = 112/183 (61%), Gaps = 1/183 (0%)
Frame = +1
Query: 304 PEWRKAMDAKVAALENNHTWTYAELLAGQKPIKSKWVYKVKYHADGSIEHYKAHLVAKGC 483
PEW++AM ++ AL+ N TW+ L + I +WVYK+K+ +DGSIE YKA LVAKG
Sbjct: 984 PEWQEAMCFELQALQANGTWSLTPLPVCKTSIGCRWVYKIKHRSDGSIERYKARLVAKGF 1043
Query: 484 SQVDREDSTKTYVPVDKMTTVRCXXXXXXXXXWSLY*MDVNNVFLH*DLDEEIYMEPPPG 663
+Q++ D T+ P K+ +VRC WSL+ MDVNN FLH DL EEIYM PPG
Sbjct: 1044 TQLEGVDYQDTFSPTTKIISVRCLLALVAARGWSLHQMDVNNAFLHGDLHEEIYMSSPPG 1103
Query: 664 F-KPPKSTYYCRIRKSIYGLQQAGRNWFAKLTITL*SLRFEQSLIEHSFFFYKQGNITLA 840
+ + CR+ KS+YGL+QA R WFAK + + + QS ++S F KQG A
Sbjct: 1104 LRRQGEENLVCRLHKSLYGLKQASRQWFAKFSEAIQFADYAQSRADYSLFTRKQGKSFTA 1163
Query: 841 LLV 849
LL+
Sbjct: 1164 LLI 1166
Score = 35.0 bits (79), Expect(2) = 2e-41
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +2
Query: 101 PPLRLQDYVCHATDRPSCQSPVPRFSSGMLYLLHHHLSYANISASHKDFLATLGSTPE 274
PP++L +YVC S +P + G Y L +++SY +++ F+A + E
Sbjct: 916 PPIKLHNYVCSHVSSNQLSSLIPGPTKGTRYPLANYVSYHRYKPAYRSFVAQHSAVTE 973
>ref|XP_006365584.1| PREDICTED: uncharacterized protein LOC102598606 [Solanum tuberosum]
Length = 1453
Score = 174 bits (441), Expect = 4e-41
Identities = 86/182 (47%), Positives = 116/182 (63%)
Frame = +1
Query: 298 LRPEWRKAMDAKVAALENNHTWTYAELLAGQKPIKSKWVYKVKYHADGSIEHYKAHLVAK 477
L P W+ AM + AL +N+TW+ L G+K + +WVYKVK+ ADGS+E YKA LV K
Sbjct: 703 LDPAWQTAMTQEFTALHDNNTWSLMPLPIGKKSVGCRWVYKVKHKADGSVERYKARLVVK 762
Query: 478 GCSQVDREDSTKTYVPVDKMTTVRCXXXXXXXXXWSLY*MDVNNVFLH*DLDEEIYMEPP 657
G +Q D T+T+ PV KMTTVR WS+Y +DVNN FLH DL+EE+YM+ P
Sbjct: 763 GYTQHHGIDYTETFSPVVKMTTVRVLIAIAAKKQWSIYQLDVNNAFLHGDLNEEVYMDVP 822
Query: 658 PGFKPPKSTYYCRIRKSIYGLQQAGRNWFAKLTITL*SLRFEQSLIEHSFFFYKQGNITL 837
PG P + C++ KS+YGL+QA R W+ KLT L S + SL ++S F K+G+ T+
Sbjct: 823 PGLDVPHTGLVCKLNKSLYGLKQASRQWYEKLTAALNSRGYTHSLHDYSLLFRKKGHSTV 882
Query: 838 AL 843
L
Sbjct: 883 FL 884
>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1486
Score = 167 bits (424), Expect(2) = 4e-41
Identities = 81/185 (43%), Positives = 118/185 (63%)
Frame = +1
Query: 295 VLRPEWRKAMDAKVAALENNHTWTYAELLAGQKPIKSKWVYKVKYHADGSIEHYKAHLVA 474
+L W+ A+ ++ +LEN TWT +L G+K + KWV+++KY +DG++E +KA LV
Sbjct: 984 MLDDHWKGAVSHEIGSLENLGTWTVEDLPPGKKALGCKWVFRLKYKSDGTLERHKARLVV 1043
Query: 475 KGCSQVDREDSTKTYVPVDKMTTVRCXXXXXXXXXWSLY*MDVNNVFLH*DLDEEIYMEP 654
G +Q + D T+T+ PV KM TVR W ++ MDV+N FLH DLDEE+YM+
Sbjct: 1044 LGNNQTEGLDYTETFAPVAKMVTVRAFLQQVVSLDWEVHQMDVHNAFLHGDLDEEVYMQF 1103
Query: 655 PPGFKPPKSTYYCRIRKSIYGLQQAGRNWFAKLTITL*SLRFEQSLIEHSFFFYKQGNIT 834
PPGF+ T CR+RKS+YGL+QA R WFAKLT L + F Q + ++S F + + +
Sbjct: 1104 PPGFRTGDKTKVCRLRKSLYGLKQAPRCWFAKLTSALKNYGFIQDISDYSLFIFHKNGVR 1163
Query: 835 LALLV 849
L +LV
Sbjct: 1164 LHVLV 1168
Score = 27.7 bits (60), Expect(2) = 4e-41
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +2
Query: 95 RRPPLRLQDYVCHATDRPSCQSPVPRFSSGMLYLLHHHLSYANISASHKDFLATLGSTPE 274
+RPP++L DYV +P F S Y L +++S + S +++ ++ + S E
Sbjct: 925 KRPPVKLADYVTTLLHQP--------FPSATPYPLDNYISSSRFSDNYQAYILAITSGNE 976
>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 166 bits (421), Expect(2) = 6e-41
Identities = 81/172 (47%), Positives = 112/172 (65%)
Frame = +1
Query: 334 VAALENNHTWTYAELLAGQKPIKSKWVYKVKYHADGSIEHYKAHLVAKGCSQVDREDSTK 513
+ A E NHTWT +L G++ I S+WVYKVK+++DGS+E YKA LVA G Q + ED +
Sbjct: 844 IDAQEENHTWTIEDLPPGKRAIGSQWVYKVKHNSDGSVERYKARLVALGNKQKEGEDYGE 903
Query: 514 TYVPVDKMTTVRCXXXXXXXXXWSLY*MDVNNVFLH*DLDEEIYMEPPPGFKPPKSTYYC 693
T+ PV KM TVR W ++ MDV+N FLH DL EE+YM+ PPGF+ C
Sbjct: 904 TFAPVAKMATVRLFLDVAVKRNWEIHQMDVHNAFLHGDLREEVYMKLPPGFEASHPNKVC 963
Query: 694 RIRKSIYGLQQAGRNWFAKLTITL*SLRFEQSLIEHSFFFYKQGNITLALLV 849
R+RK++YGL+QA R WF KLT L F+QSL ++S F +G++ + +L+
Sbjct: 964 RLRKALYGLKQAPRCWFEKLTTALKRYGFQQSLADYSLFTLVKGSVRIKILI 1015
Score = 28.5 bits (62), Expect(2) = 6e-41
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +2
Query: 86 TCDRRPPLRLQDYVCHATDRPSCQSPVPRFSSGMLYLLHHHLSYANISASHKDFLA 253
T ++ PP+ L+D+V + T CQ + +S +LY L SASH ++A
Sbjct: 792 TRNKAPPVTLKDFVVNTT---VCQESPSKLNS-ILYQLQKRDDTRRFSASHTTYVA 843
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 172 bits (437), Expect = 1e-40
Identities = 89/190 (46%), Positives = 117/190 (61%)
Frame = +1
Query: 280 HLRPGVLRPEWRKAMDAKVAALENNHTWTYAELLAGQKPIKSKWVYKVKYHADGSIEHYK 459
H + V W AM +V ALE N TW +L G+ I S+WVYK K++ADG++E YK
Sbjct: 984 HFKEAVKVKVWNDAMYKEVDALEVNKTWDIVDLPTGKVAIGSQWVYKTKFNADGTVERYK 1043
Query: 460 AHLVAKGCSQVDREDSTKTYVPVDKMTTVRCXXXXXXXXXWSLY*MDVNNVFLH*DLDEE 639
A LV +G +Q++ ED T+T+ PV KMTTVR W +Y MDV+N FLH DL+EE
Sbjct: 1044 ARLVVQGNNQIEGEDYTETFAPVVKMTTVRTLLRLVAANQWEVYQMDVHNAFLHGDLEEE 1103
Query: 640 IYMEPPPGFKPPKSTYYCRIRKSIYGLQQAGRNWFAKLTITL*SLRFEQSLIEHSFFFYK 819
+YM+ PPGF+ CR+RKS+YGL+QA R WF KL+ L F Q ++SFF Y
Sbjct: 1104 VYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDALKRFGFIQGYEDYSFFSYS 1163
Query: 820 QGNITLALLV 849
I L +LV
Sbjct: 1164 CKGIELRVLV 1173
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 172 bits (435), Expect = 2e-40
Identities = 87/190 (45%), Positives = 118/190 (62%)
Frame = +1
Query: 280 HLRPGVLRPEWRKAMDAKVAALENNHTWTYAELLAGQKPIKSKWVYKVKYHADGSIEHYK 459
H + V W AM +V ALE N TW +L G+ I S+WV+K KY++DG++E YK
Sbjct: 994 HFKEAVQIKVWNDAMFTEVDALEINKTWDIVDLPPGKVAIGSQWVFKTKYNSDGTVERYK 1053
Query: 460 AHLVAKGCSQVDREDSTKTYVPVDKMTTVRCXXXXXXXXXWSLY*MDVNNVFLH*DLDEE 639
A LV +G QV+ ED +T+ PV +MTTVR W +Y MDV+N FLH DL+EE
Sbjct: 1054 ARLVVQGNKQVEGEDYKETFAPVVRMTTVRTLLRNVAANQWEVYQMDVHNAFLHGDLEEE 1113
Query: 640 IYMEPPPGFKPPKSTYYCRIRKSIYGLQQAGRNWFAKLTITL*SLRFEQSLIEHSFFFYK 819
+YM+ PPGF+ CR+RKS+YGL+QA R WF KL+ +L F QS ++S F Y
Sbjct: 1114 VYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDSLLRFGFVQSYEDYSLFSYT 1173
Query: 820 QGNITLALLV 849
+ NI L +L+
Sbjct: 1174 RNNIELRVLI 1183
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 157 bits (396), Expect(2) = 1e-39
Identities = 79/180 (43%), Positives = 112/180 (62%)
Frame = +1
Query: 310 WRKAMDAKVAALENNHTWTYAELLAGQKPIKSKWVYKVKYHADGSIEHYKAHLVAKGCSQ 489
WR+AM A++ +L N T++ L G++ + +KWVYK+KY +DG+IE YKA LV G Q
Sbjct: 971 WREAMSAEIESLRVNQTFSIVNLPPGKRALGNKWVYKIKYRSDGAIERYKARLVVLGNCQ 1030
Query: 490 VDREDSTKTYVPVDKMTTVRCXXXXXXXXXWSLY*MDVNNVFLH*DLDEEIYMEPPPGFK 669
+ D +T+ PV KM+TVR W ++ MDV+N FLH DL EE+YM+ P GF+
Sbjct: 1031 KEGVDYDETFAPVAKMSTVRLFLGVAAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGFQ 1090
Query: 670 PPKSTYYCRIRKSIYGLQQAGRNWFAKLTITL*SLRFEQSLIEHSFFFYKQGNITLALLV 849
+ CR+ KS+YGL+QA R WF+KL+ L F QSL ++S F Y I + +LV
Sbjct: 1091 CDDPSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSLSDYSLFSYNNDGIFVHVLV 1150
Score = 33.9 bits (76), Expect(2) = 1e-39
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = +2
Query: 104 PLRLQDYVCHATDRPSCQSPVPRFSSGMLYLLHHHLSYANISASHKDFLATLGSTPELTT 283
P++L+++V T+ S +S P SS LY + ++ ++SHK FLA + + E TT
Sbjct: 905 PMKLKNFV---TNTVSVESISPEASSSSLYPIEKYVDCHRFTSSHKAFLAAVTAGMEPTT 961