BLASTX nr result
ID: Rauwolfia21_contig00015445
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00015445
(906 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004244509.1| PREDICTED: mediator of RNA polymerase II tra... 112 2e-22
ref|XP_006357075.1| PREDICTED: mediator of RNA polymerase II tra... 109 2e-21
gb|EOY22497.1| Uncharacterized protein isoform 1 [Theobroma cacao] 104 5e-20
ref|XP_002283991.1| PREDICTED: uncharacterized protein LOC100264... 103 1e-19
gb|EOY22498.1| Uncharacterized protein isoform 2, partial [Theob... 99 2e-18
ref|XP_002318134.1| hypothetical protein POPTR_0012s10100g [Popu... 97 1e-17
ref|XP_004138044.1| PREDICTED: mediator of RNA polymerase II tra... 95 3e-17
ref|XP_002511168.1| conserved hypothetical protein [Ricinus comm... 94 7e-17
ref|XP_002321708.2| hypothetical protein POPTR_0015s10970g [Popu... 93 1e-16
gb|EXB25243.1| hypothetical protein L484_010110 [Morus notabilis] 93 2e-16
ref|XP_002864848.1| hypothetical protein ARALYDRAFT_496535 [Arab... 92 3e-16
gb|EOY22499.1| Uncharacterized protein isoform 3 [Theobroma cacao] 92 3e-16
ref|XP_006281191.1| hypothetical protein CARUB_v10027226mg [Caps... 91 5e-16
ref|XP_003526951.1| PREDICTED: mediator of RNA polymerase II tra... 91 6e-16
dbj|BAD43384.1| unknown protein [Arabidopsis thaliana] 90 1e-15
ref|NP_568973.1| uncharacterized protein [Arabidopsis thaliana] ... 90 1e-15
gb|ESW09898.1| hypothetical protein PHAVU_009G165600g [Phaseolus... 90 1e-15
ref|XP_006436855.1| hypothetical protein CICLE_v10032864mg [Citr... 89 2e-15
ref|XP_006581863.1| PREDICTED: mediator of RNA polymerase II tra... 89 3e-15
gb|EMJ24715.1| hypothetical protein PRUPE_ppa011908mg [Prunus pe... 89 3e-15
>ref|XP_004244509.1| PREDICTED: mediator of RNA polymerase II transcription subunit
30-like [Solanum lycopersicum]
Length = 198
Score = 112 bits (279), Expect = 2e-22
Identities = 66/129 (51%), Positives = 79/129 (61%), Gaps = 6/129 (4%)
Frame = +3
Query: 534 KSIQELAMDGQKHLEDTIEAAFQILSSMNDELCNPSLWAPPNPSSATLST-----NHHAT 698
K+IQELA++GQKHLEDTIEAA QILS+MNDELCNPSLW+ N ++A+ + A+
Sbjct: 11 KTIQELAVEGQKHLEDTIEAAHQILSAMNDELCNPSLWSTLNTAAASSAVAVAGGGVGAS 70
Query: 699 NLSSNG-HHSANGDVLXXXXXXXXXXXXNHFDIGGGALDEARLRYKXXXXXXXXXXXXXX 875
+ SNG H NGD+ H DIGGGALDE+RLRYK
Sbjct: 71 GVLSNGQQHHTNGDI-SSDTSSSSSASAQHLDIGGGALDESRLRYKSSIASLRSVLTAIS 129
Query: 876 NSQKAKASE 902
NSQKAKA E
Sbjct: 130 NSQKAKALE 138
>ref|XP_006357075.1| PREDICTED: mediator of RNA polymerase II transcription subunit
30-like isoform X1 [Solanum tuberosum]
gi|565381437|ref|XP_006357076.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 30-like isoform
X2 [Solanum tuberosum]
Length = 198
Score = 109 bits (272), Expect = 2e-21
Identities = 65/129 (50%), Positives = 79/129 (61%), Gaps = 6/129 (4%)
Frame = +3
Query: 534 KSIQELAMDGQKHLEDTIEAAFQILSSMNDELCNPSLWAPPNPSSATLSTNH-----HAT 698
K+IQELA++GQKHLEDTIEAA QILS+MNDELCNPSLW+ N ++++ S + A+
Sbjct: 11 KTIQELAVEGQKHLEDTIEAAHQILSAMNDELCNPSLWSTLNTAASSASASAAGGGVGAS 70
Query: 699 NLSSNGHH-SANGDVLXXXXXXXXXXXXNHFDIGGGALDEARLRYKXXXXXXXXXXXXXX 875
+ SNG NGD+ H DIGGGALDE+RLRYK
Sbjct: 71 AVLSNGQQLHTNGDI-SSDTSSSSSASAQHLDIGGGALDESRLRYKSSIASLRSVLTAIS 129
Query: 876 NSQKAKASE 902
NSQKAKA E
Sbjct: 130 NSQKAKALE 138
>gb|EOY22497.1| Uncharacterized protein isoform 1 [Theobroma cacao]
Length = 198
Score = 104 bits (259), Expect = 5e-20
Identities = 69/152 (45%), Positives = 86/152 (56%), Gaps = 9/152 (5%)
Frame = +3
Query: 474 MEDKSGNCSTXXXXXXXAHTKSIQELAMDGQKHLEDTIEAAFQILSSMNDELCNPSLWA- 650
ME+ N +T ++TK+ QELA +G KHLE+TIEAAFQILSSMNDELCNP+LW+
Sbjct: 1 MEENPLNATTPTS----SNTKTTQELAAEGLKHLEETIEAAFQILSSMNDELCNPALWST 56
Query: 651 -PPNPSSATLSTNHHATNLSSNGHHS-ANGDVLXXXXXXXXXXXXNHFDIGG------GA 806
P + +S T S+ A + NG S +NGD +H ++GG GA
Sbjct: 57 IPSSSNSTTASSTTTANTAAPNGPSSLSNGD--------SASDGGHHLEMGGIGGSGNGA 108
Query: 807 LDEARLRYKXXXXXXXXXXXXXXNSQKAKASE 902
LDEARLRYK NSQKAKA E
Sbjct: 109 LDEARLRYKNSVASLRAVLAAIPNSQKAKAFE 140
>ref|XP_002283991.1| PREDICTED: uncharacterized protein LOC100264705 [Vitis vinifera]
gi|147789866|emb|CAN73869.1| hypothetical protein
VITISV_001275 [Vitis vinifera]
gi|297734439|emb|CBI15686.3| unnamed protein product
[Vitis vinifera]
Length = 174
Score = 103 bits (256), Expect = 1e-19
Identities = 62/124 (50%), Positives = 74/124 (59%), Gaps = 1/124 (0%)
Frame = +3
Query: 534 KSIQELAMDGQKHLEDTIEAAFQILSSMNDELCNPSLWAPPNPSSATLSTNHHATNLSSN 713
K+ QELA++GQKHLE+TIE+AFQILSSMNDELCNP+LW+ P P AT SS+
Sbjct: 7 KATQELALEGQKHLEETIESAFQILSSMNDELCNPTLWSTPPPP---------ATAASSH 57
Query: 714 GHHSANGDVLXXXXXXXXXXXXNHFDI-GGGALDEARLRYKXXXXXXXXXXXXXXNSQKA 890
S NGD +H +I GGGALD+ARLRYK +SQKA
Sbjct: 58 SSASLNGDA--------SSDFSHHMEIAGGGALDDARLRYKSSVASLRAVLNAIQSSQKA 109
Query: 891 KASE 902
KA E
Sbjct: 110 KAFE 113
>gb|EOY22498.1| Uncharacterized protein isoform 2, partial [Theobroma cacao]
Length = 142
Score = 99.4 bits (246), Expect = 2e-18
Identities = 66/152 (43%), Positives = 85/152 (55%), Gaps = 9/152 (5%)
Frame = +3
Query: 474 MEDKSGNCSTXXXXXXXAHTKSIQELAMDGQKHLEDTIEAAFQILSSMNDELCNPSLWA- 650
ME+ N +T ++TK+ QELA +G KHLE+TIEAAFQILSSMNDELCNP+LW+
Sbjct: 1 MEENPLNATTPTS----SNTKTTQELAAEGLKHLEETIEAAFQILSSMNDELCNPALWST 56
Query: 651 -PPNPSSATLSTNHHATNLSSNGHHS-ANGDVLXXXXXXXXXXXXNHFDIGG------GA 806
P + +S T S+ A + NG S +NGD +H ++GG GA
Sbjct: 57 IPSSSNSTTASSTTTANTAAPNGPSSLSNGD--------SASDGGHHLEMGGIGGSGNGA 108
Query: 807 LDEARLRYKXXXXXXXXXXXXXXNSQKAKASE 902
LDEARLRYK NSQK A++
Sbjct: 109 LDEARLRYKNSVASLRAVLAAIPNSQKELANK 140
>ref|XP_002318134.1| hypothetical protein POPTR_0012s10100g [Populus trichocarpa]
gi|118486707|gb|ABK95190.1| unknown [Populus
trichocarpa] gi|222858807|gb|EEE96354.1| hypothetical
protein POPTR_0012s10100g [Populus trichocarpa]
Length = 185
Score = 96.7 bits (239), Expect = 1e-17
Identities = 53/125 (42%), Positives = 74/125 (59%)
Frame = +3
Query: 528 HTKSIQELAMDGQKHLEDTIEAAFQILSSMNDELCNPSLWAPPNPSSATLSTNHHATNLS 707
H+K+ QELA++GQKHLE+TI+AA+QILSSMNDELCNP+LW+ + S++T+++ ++N
Sbjct: 15 HSKTTQELAIEGQKHLEETIQAAYQILSSMNDELCNPTLWSTTSTSTSTVTSPITSSNAQ 74
Query: 708 SNGHHSANGDVLXXXXXXXXXXXXNHFDIGGGALDEARLRYKXXXXXXXXXXXXXXNSQK 887
+ ++A D +G GALDEAR RYK NS K
Sbjct: 75 NGDANAAVSDSTLELNGGG--------GVGNGALDEARFRYKNSVAALRDVLAAIPNSHK 126
Query: 888 AKASE 902
AK E
Sbjct: 127 AKPFE 131
>ref|XP_004138044.1| PREDICTED: mediator of RNA polymerase II transcription subunit
30-like [Cucumis sativus]
gi|449532651|ref|XP_004173294.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 30-like [Cucumis
sativus]
Length = 198
Score = 95.1 bits (235), Expect = 3e-17
Identities = 63/150 (42%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Frame = +3
Query: 474 MEDKSGNCSTXXXXXXXAHTKSIQELAMDGQKHLEDTIEAAFQILSSMNDELCNPSLWAP 653
ME+KS N A ++ QELAM+G KHLE+TIE+AFQIL SMNDELCNP+LW+
Sbjct: 1 MEEKSTNV--------LALPQTTQELAMEGIKHLEETIESAFQILYSMNDELCNPTLWST 52
Query: 654 PNPSSATLSTNHHATNLSSNGHHSANGDVLXXXXXXXXXXXXNHFDI-------GGGALD 812
+ ++ T ++ + S HSANG V +H D GGAL+
Sbjct: 53 TSSTATTATSGLTIASPSGPSSHSANGVV---NGDASSESTSHHTDSSGGGGSGSGGALE 109
Query: 813 EARLRYKXXXXXXXXXXXXXXNSQKAKASE 902
EAR+RYK NSQKAKA E
Sbjct: 110 EARVRYKNSVLALRAILAAIPNSQKAKAYE 139
>ref|XP_002511168.1| conserved hypothetical protein [Ricinus communis]
gi|223550283|gb|EEF51770.1| conserved hypothetical
protein [Ricinus communis]
Length = 196
Score = 94.0 bits (232), Expect = 7e-17
Identities = 60/137 (43%), Positives = 77/137 (56%), Gaps = 13/137 (9%)
Frame = +3
Query: 531 TKSIQELAMDGQKHLEDTIEAAFQILSSMNDELCNPSLWAPPNPSSAT---LSTNHHATN 701
+K+ QELAM+GQKHLE+TI+AA+QILSSMNDELCNP+LW+ + S+ T +S ++ +
Sbjct: 12 SKTTQELAMEGQKHLEETIQAAYQILSSMNDELCNPTLWSTTSSSNNTTSPISAPANSNS 71
Query: 702 LSSNGHHSANGDVLXXXXXXXXXXXXNHFD----------IGGGALDEARLRYKXXXXXX 851
LS NG NGD + +HFD G GALDEAR RYK
Sbjct: 72 LSQNG--VVNGDSV------SDAVVAHHFDGTGTGVVGGGTGNGALDEARFRYKNSVAAL 123
Query: 852 XXXXXXXXNSQKAKASE 902
NS KA + E
Sbjct: 124 REVLAAIPNSHKAISFE 140
>ref|XP_002321708.2| hypothetical protein POPTR_0015s10970g [Populus trichocarpa]
gi|550322461|gb|EEF05835.2| hypothetical protein
POPTR_0015s10970g [Populus trichocarpa]
Length = 194
Score = 93.2 bits (230), Expect = 1e-16
Identities = 57/130 (43%), Positives = 70/130 (53%), Gaps = 5/130 (3%)
Frame = +3
Query: 528 HTKSIQELAMDGQKHLEDTIEAAFQILSSMNDELCNPSLWAPPNPSSATLSTNHHATNLS 707
H+K+ QELA++GQKHLE+TI+A +QILSSMNDELCNP+LW+ S+AT + T S
Sbjct: 15 HSKTTQELAIEGQKHLEETIQAGYQILSSMNDELCNPTLWS--TTSTATTAVTSPIT--S 70
Query: 708 SNGHHSA-----NGDVLXXXXXXXXXXXXNHFDIGGGALDEARLRYKXXXXXXXXXXXXX 872
N + A NGD +G GALDEAR RYK
Sbjct: 71 KNAQNGAVVITVNGDANAAVSDSTHELSGGGGGVGNGALDEARFRYKNSVAALRDVLAAI 130
Query: 873 XNSQKAKASE 902
NS KAK E
Sbjct: 131 PNSHKAKPFE 140
>gb|EXB25243.1| hypothetical protein L484_010110 [Morus notabilis]
Length = 200
Score = 92.8 bits (229), Expect = 2e-16
Identities = 60/152 (39%), Positives = 79/152 (51%), Gaps = 9/152 (5%)
Frame = +3
Query: 474 MEDKSGNCSTXXXXXXXAHTKSIQELAMDGQKHLEDTIEAAFQILSSMNDELCNPSLWAP 653
ME+K+ N A K+ Q+LAM+GQKHLEDTIE+AFQILSSMNDELCNP+LW+
Sbjct: 1 MEEKAVNSMAI------ASLKTTQDLAMEGQKHLEDTIESAFQILSSMNDELCNPALWST 54
Query: 654 PNPSSATLSTNHHATNLSSNGHHS---ANGDVLXXXXXXXXXXXXNHFDIG------GGA 806
+A S++ ++ + HS NGD +H D+G GGA
Sbjct: 55 TTTVAAATSSSSPSSAANGPSSHSNGLVNGDA-------AASDSHHHADLGGGGGAAGGA 107
Query: 807 LDEARLRYKXXXXXXXXXXXXXXNSQKAKASE 902
L EA+ RYK NSQ+ + E
Sbjct: 108 LGEAQFRYKNAVASLRAILAAIPNSQRGRTFE 139
>ref|XP_002864848.1| hypothetical protein ARALYDRAFT_496535 [Arabidopsis lyrata subsp.
lyrata] gi|297310683|gb|EFH41107.1| hypothetical protein
ARALYDRAFT_496535 [Arabidopsis lyrata subsp. lyrata]
Length = 178
Score = 92.0 bits (227), Expect = 3e-16
Identities = 58/130 (44%), Positives = 68/130 (52%), Gaps = 10/130 (7%)
Frame = +3
Query: 543 QELAMDGQKHLEDTIEAAFQILSSMNDELCNPSLWA-PPNPSSATLSTNHHATNLSSNGH 719
QELAM+G+KHLE+TIEAAFQI+S+MNDELCNPSLW+ PSSA +T
Sbjct: 4 QELAMEGEKHLEETIEAAFQIISAMNDELCNPSLWSTSATPSSAATAT------------ 51
Query: 720 HSANGDVLXXXXXXXXXXXXNHFDIGGG---------ALDEARLRYKXXXXXXXXXXXXX 872
+NG L +H + GGG LDEA LRYK
Sbjct: 52 -GSNGSALVSVDAAAIDGTSHHSESGGGGGGGGSGNSVLDEASLRYKNSVTSLRAVLAAI 110
Query: 873 XNSQKAKASE 902
NS KAKASE
Sbjct: 111 PNSHKAKASE 120
>gb|EOY22499.1| Uncharacterized protein isoform 3 [Theobroma cacao]
Length = 143
Score = 91.7 bits (226), Expect = 3e-16
Identities = 59/129 (45%), Positives = 77/129 (59%), Gaps = 9/129 (6%)
Frame = +3
Query: 474 MEDKSGNCSTXXXXXXXAHTKSIQELAMDGQKHLEDTIEAAFQILSSMNDELCNPSLWA- 650
ME+ N +T ++TK+ QELA +G KHLE+TIEAAFQILSSMNDELCNP+LW+
Sbjct: 1 MEENPLNATTPTS----SNTKTTQELAAEGLKHLEETIEAAFQILSSMNDELCNPALWST 56
Query: 651 -PPNPSSATLSTNHHATNLSSNGHHS-ANGDVLXXXXXXXXXXXXNHFDIGG------GA 806
P + +S T S+ A + NG S +NGD +H ++GG GA
Sbjct: 57 IPSSSNSTTASSTTTANTAAPNGPSSLSNGD--------SASDGGHHLEMGGIGGSGNGA 108
Query: 807 LDEARLRYK 833
LDEARLR +
Sbjct: 109 LDEARLRQR 117
>ref|XP_006281191.1| hypothetical protein CARUB_v10027226mg [Capsella rubella]
gi|482549895|gb|EOA14089.1| hypothetical protein
CARUB_v10027226mg [Capsella rubella]
Length = 177
Score = 91.3 bits (225), Expect = 5e-16
Identities = 55/127 (43%), Positives = 68/127 (53%), Gaps = 7/127 (5%)
Frame = +3
Query: 543 QELAMDGQKHLEDTIEAAFQILSSMNDELCNPSLWAPPNPSSATLSTNHHATNLSSNGHH 722
QELA +G+KHLE+TIEAAFQI+S+MNDELCNPSLW+ +S+ ++T
Sbjct: 4 QELATEGEKHLEETIEAAFQIISAMNDELCNPSLWSTSATASSAMATT-----------T 52
Query: 723 SANGDVLXXXXXXXXXXXXNHFDIGGG-------ALDEARLRYKXXXXXXXXXXXXXXNS 881
+NG L +H + GGG ALDEA LRYK NS
Sbjct: 53 GSNGTALVSADAAAIDETSHHSESGGGGGGSGNSALDEASLRYKNSVTSLRAVLAAIPNS 112
Query: 882 QKAKASE 902
QK KASE
Sbjct: 113 QKPKASE 119
>ref|XP_003526951.1| PREDICTED: mediator of RNA polymerase II transcription subunit
30-like isoform X1 [Glycine max]
Length = 168
Score = 90.9 bits (224), Expect = 6e-16
Identities = 57/122 (46%), Positives = 68/122 (55%)
Frame = +3
Query: 531 TKSIQELAMDGQKHLEDTIEAAFQILSSMNDELCNPSLWAPPNPSSATLSTNHHATNLSS 710
+K+ QELAM+GQK+LE+TIE AFQILSSMNDELCNP LW+ SA+ S N AT+ +S
Sbjct: 6 SKTTQELAMEGQKYLEETIENAFQILSSMNDELCNPVLWS--TSPSASSSPNADATSENS 63
Query: 711 NGHHSANGDVLXXXXXXXXXXXXNHFDIGGGALDEARLRYKXXXXXXXXXXXXXXNSQKA 890
N H A GGGAL++AR RYK NSQKA
Sbjct: 64 NHHADATTAAAG----------------GGGALEQARSRYKKAVAALRTILTAIPNSQKA 107
Query: 891 KA 896
A
Sbjct: 108 NA 109
>dbj|BAD43384.1| unknown protein [Arabidopsis thaliana]
Length = 184
Score = 90.1 bits (222), Expect = 1e-15
Identities = 58/134 (43%), Positives = 69/134 (51%), Gaps = 10/134 (7%)
Frame = +3
Query: 531 TKSIQELAMDGQKHLEDTIEAAFQILSSMNDELCNPSLWA-PPNPSSATLSTNHHATNLS 707
T + QELAM+G+K LE+TIEAAFQI+S+MNDELCNPSLW+ PSSA +T
Sbjct: 6 TMTTQELAMEGEKQLEETIEAAFQIISAMNDELCNPSLWSTSATPSSAATTT-------- 57
Query: 708 SNGHHSANGDVLXXXXXXXXXXXXNHFDIGGG---------ALDEARLRYKXXXXXXXXX 860
+NG L +H + GG LDEA LRYK
Sbjct: 58 -----GSNGSALVSADAAAIDGTSHHSESAGGGGGEGSGNSVLDEASLRYKNSVTSLRAV 112
Query: 861 XXXXXNSQKAKASE 902
NSQKAKASE
Sbjct: 113 LAAIPNSQKAKASE 126
>ref|NP_568973.1| uncharacterized protein [Arabidopsis thaliana]
gi|75171739|sp|Q9FMV4.1|MED30_ARATH RecName:
Full=Mediator of RNA polymerase II transcription subunit
30 gi|9758289|dbj|BAB08813.1| unnamed protein product
[Arabidopsis thaliana] gi|190886513|gb|ACE95179.1|
At1g17730 [Arabidopsis thaliana]
gi|332010374|gb|AED97757.1| uncharacterized protein
AT5G63480 [Arabidopsis thaliana]
Length = 189
Score = 90.1 bits (222), Expect = 1e-15
Identities = 58/134 (43%), Positives = 69/134 (51%), Gaps = 10/134 (7%)
Frame = +3
Query: 531 TKSIQELAMDGQKHLEDTIEAAFQILSSMNDELCNPSLWA-PPNPSSATLSTNHHATNLS 707
T + QELAM+G+K LE+TIEAAFQI+S+MNDELCNPSLW+ PSSA +T
Sbjct: 11 TMTTQELAMEGEKQLEETIEAAFQIISAMNDELCNPSLWSTSATPSSAATTT-------- 62
Query: 708 SNGHHSANGDVLXXXXXXXXXXXXNHFDIGGG---------ALDEARLRYKXXXXXXXXX 860
+NG L +H + GG LDEA LRYK
Sbjct: 63 -----GSNGSALVSADAAAIDGTSHHSESAGGGGGGGSGNSVLDEASLRYKNSVTSLRAV 117
Query: 861 XXXXXNSQKAKASE 902
NSQKAKASE
Sbjct: 118 LAAIPNSQKAKASE 131
>gb|ESW09898.1| hypothetical protein PHAVU_009G165600g [Phaseolus vulgaris]
Length = 181
Score = 89.7 bits (221), Expect = 1e-15
Identities = 57/131 (43%), Positives = 69/131 (52%), Gaps = 8/131 (6%)
Frame = +3
Query: 525 AHTKSIQELAMDGQKHLEDTIEAAFQILSSMNDELCNPSLW--------APPNPSSATLS 680
+ +K+ QELAM+GQK+LE+TIE AFQILSSMNDELCNP LW A PN SAT
Sbjct: 11 SRSKTTQELAMEGQKYLEETIEFAFQILSSMNDELCNPVLWSTSPSATSASPNAPSATAD 70
Query: 681 TNHHATNLSSNGHHSANGDVLXXXXXXXXXXXXNHFDIGGGALDEARLRYKXXXXXXXXX 860
+ +NL S+ + G GGAL+EARLRYK
Sbjct: 71 STSDNSNLHSDSATVSAG--------------------AGGALEEARLRYKNAVAALRTI 110
Query: 861 XXXXXNSQKAK 893
NSQK+K
Sbjct: 111 LTAIPNSQKSK 121
>ref|XP_006436855.1| hypothetical protein CICLE_v10032864mg [Citrus clementina]
gi|568880628|ref|XP_006493212.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 30-like [Citrus
sinensis] gi|557539051|gb|ESR50095.1| hypothetical
protein CICLE_v10032864mg [Citrus clementina]
Length = 183
Score = 89.4 bits (220), Expect = 2e-15
Identities = 55/128 (42%), Positives = 68/128 (53%), Gaps = 4/128 (3%)
Frame = +3
Query: 531 TKSIQELAMDGQKHLEDTIEAAFQILSSMNDELCNPSLWAPPNPSSATLSTN--HHATNL 704
+K+ QELA +GQKHLE+TIEAAFQILSSMNDELCNP+LW+ ++ + S H +
Sbjct: 14 SKTTQELAKEGQKHLEETIEAAFQILSSMNDELCNPTLWSTTTTTTTSTSNGVVHADSTS 73
Query: 705 SSNGHH--SANGDVLXXXXXXXXXXXXNHFDIGGGALDEARLRYKXXXXXXXXXXXXXXN 878
+N HH S+ G G ALDEAR RYK N
Sbjct: 74 DANNHHLDSSGGS-------------------GNSALDEARHRYKTSVAALRAVLTAIPN 114
Query: 879 SQKAKASE 902
S KAK+ E
Sbjct: 115 SHKAKSFE 122
>ref|XP_006581863.1| PREDICTED: mediator of RNA polymerase II transcription subunit
30-like isoform X2 [Glycine max]
Length = 139
Score = 88.6 bits (218), Expect = 3e-15
Identities = 56/125 (44%), Positives = 68/125 (54%)
Frame = +3
Query: 531 TKSIQELAMDGQKHLEDTIEAAFQILSSMNDELCNPSLWAPPNPSSATLSTNHHATNLSS 710
+K+ QELAM+GQK+LE+TIE AFQILSSMNDELCNP LW+ SA+ S N AT+ +S
Sbjct: 6 SKTTQELAMEGQKYLEETIENAFQILSSMNDELCNPVLWS--TSPSASSSPNADATSENS 63
Query: 711 NGHHSANGDVLXXXXXXXXXXXXNHFDIGGGALDEARLRYKXXXXXXXXXXXXXXNSQKA 890
N H A GGGAL++AR RYK NSQK
Sbjct: 64 NHHADATTAAAG----------------GGGALEQARSRYKKAVAALRTILTAIPNSQKQ 107
Query: 891 KASER 905
+ R
Sbjct: 108 RTIGR 112
>gb|EMJ24715.1| hypothetical protein PRUPE_ppa011908mg [Prunus persica]
Length = 191
Score = 88.6 bits (218), Expect = 3e-15
Identities = 58/126 (46%), Positives = 70/126 (55%), Gaps = 7/126 (5%)
Frame = +3
Query: 534 KSIQELAMDGQKHLEDTIEAAFQILSSMNDELCNPSLWAPPNPSSATLSTNHHATNLSSN 713
K+ QELAM+GQKHLE+TIEAAFQILSSMNDELCNP+LW+ + SA ATN+++
Sbjct: 10 KTTQELAMEGQKHLEETIEAAFQILSSMNDELCNPTLWSTTSSFSA-------ATNIANG 62
Query: 714 GHHSANGDVLXXXXXXXXXXXXNHFDI-------GGGALDEARLRYKXXXXXXXXXXXXX 872
ANG V +H D+ GGAL+EAR RY
Sbjct: 63 PAPHANG-VNNGDSSSSDNTSTHHGDLIGAGGSGTGGALEEARHRYTNSVRLLRAVLTTI 121
Query: 873 XNSQKA 890
NSQKA
Sbjct: 122 PNSQKA 127