BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00015416
         (801 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polyme...   197   3e-48
emb|CBI28010.3| unnamed protein product [Vitis vinifera]              189   1e-45
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme...   189   1e-45
ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polyme...   189   1e-45
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr...   187   5e-45
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr...   187   5e-45
ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Popu...   184   2e-44
ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Popu...   184   2e-44
ref|XP_002310028.1| hypothetical protein POPTRDRAFT_654879 [Popu...   178   2e-42
ref|XP_004288887.1| PREDICTED: probable RNA-dependent RNA polyme...   177   3e-42
gb|EMJ05474.1| hypothetical protein PRUPE_ppa001584mg [Prunus pe...   176   6e-42
gb|EXB59780.1| putative RNA-dependent RNA polymerase 3 [Morus no...   176   1e-41
emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]   172   2e-40
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme...   171   4e-40
ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [A...   169   1e-39
ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polyme...   166   1e-38
ref|XP_004288888.1| PREDICTED: probable RNA-dependent RNA polyme...   162   2e-37
ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Popu...   159   1e-36
ref|XP_002336131.1| hypothetical protein POPTRDRAFT_584507 [Popu...   159   1e-36
gb|EOY15730.1| RNA-dependent RNA polymerase family protein, puta...   158   2e-36

>ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
            lycopersicum]
          Length = 1011

 Score =  197 bits (502), Expect = 3e-48
 Identities = 94/186 (50%), Positives = 131/186 (70%)
 Frame = +3

Query: 3    PKSGKKVNVPSDLIAERYPHYMQRDGNCSYHSTSILGEIYDKLKEFQSAVHSVGEIWKLP 182
            PKSGKKV++P  L A ++PHYM++  +CSYHSTSILG+IYD +  +      + EI KLP
Sbjct: 826  PKSGKKVSIPHYLKANKFPHYMEKGNSCSYHSTSILGQIYDHVDSYPDEDLCITEISKLP 885

Query: 183  AFDAEVPERYMGKWRELYDKYRHEMVEALNKSHDSKNNAANEVIKKYKQLLYEAEDFQES 362
             F+ E+P+R M  WR  Y++Y+ +M  A+N   + +  + NEVIKKYK LLY A +F+++
Sbjct: 886  CFEVEIPQRCMTLWRGRYEEYKKDMTRAMNFDCELRITSCNEVIKKYKMLLYGAVEFEQT 945

Query: 363  KKDVEELYNEALAIYHVTYNFAINRGDLGKCRFAWKVAGSALCNLHAFRTKENPIRILPS 542
             +  E++++EALAIYHVTY+ A     + KC FAWKVAGSALC +HA   KE  + ILPS
Sbjct: 946  VRKTEDIFDEALAIYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMYRKEKDLPILPS 1005

Query: 543  LLREIL 560
            +L+EIL
Sbjct: 1006 VLQEIL 1011


>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
          Length = 929

 Score =  189 bits (480), Expect = 1e-45
 Identities = 91/186 (48%), Positives = 129/186 (69%), Gaps = 1/186 (0%)
 Frame = +3

Query: 3    PKSGKKVNVPSDLIAERYPHYMQRDGNCSYHSTSILGEIYDKLKEFQSAVHSVGEIWKLP 182
            PKSG KVNV  +L AE++PH+M R+   SYHSTSILG+IYD ++ FQ    S  EIW+LP
Sbjct: 744  PKSGMKVNVSKELKAEKFPHFMGRES--SYHSTSILGQIYDAVESFQPENQSTKEIWRLP 801

Query: 183  AFDAE-VPERYMGKWRELYDKYRHEMVEALNKSHDSKNNAANEVIKKYKQLLYEAEDFQE 359
             F+ + VP+  +  W++ YD+YR EM  AL    ++K+  A EVI KYKQ+LY A +F+E
Sbjct: 802  LFNIDAVPQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGAAEFEE 861

Query: 360  SKKDVEELYNEALAIYHVTYNFAINRGDLGKCRFAWKVAGSALCNLHAFRTKENPIRILP 539
            S +++E++++EALAIYHVTY F IN   +  C F W+VAG ALC L+  +  E  +  +P
Sbjct: 862  SPRNLEDIFDEALAIYHVTYEFVINGARVSYCNFPWRVAGRALCKLYTVKLGEKSMVCVP 921

Query: 540  SLLREI 557
            S+LR++
Sbjct: 922  SVLRQV 927


>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
            vinifera]
          Length = 943

 Score =  189 bits (480), Expect = 1e-45
 Identities = 91/186 (48%), Positives = 129/186 (69%), Gaps = 1/186 (0%)
 Frame = +3

Query: 3    PKSGKKVNVPSDLIAERYPHYMQRDGNCSYHSTSILGEIYDKLKEFQSAVHSVGEIWKLP 182
            PKSG KVNV  +L AE++PH+M R+   SYHSTSILG+IYD ++ FQ    S  EIW+LP
Sbjct: 758  PKSGMKVNVSKELKAEKFPHFMGRES--SYHSTSILGQIYDAVESFQPENQSTKEIWRLP 815

Query: 183  AFDAE-VPERYMGKWRELYDKYRHEMVEALNKSHDSKNNAANEVIKKYKQLLYEAEDFQE 359
             F+ + VP+  +  W++ YD+YR EM  AL    ++K+  A EVI KYKQ+LY A +F+E
Sbjct: 816  LFNIDAVPQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGAAEFEE 875

Query: 360  SKKDVEELYNEALAIYHVTYNFAINRGDLGKCRFAWKVAGSALCNLHAFRTKENPIRILP 539
            S +++E++++EALAIYHVTY F IN   +  C F W+VAG ALC L+  +  E  +  +P
Sbjct: 876  SPRNLEDIFDEALAIYHVTYEFVINGARVSYCNFPWRVAGRALCKLYTVKLGEKSMVCVP 935

Query: 540  SLLREI 557
            S+LR++
Sbjct: 936  SVLRQV 941


>ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
            tuberosum]
          Length = 1110

 Score =  189 bits (479), Expect = 1e-45
 Identities = 96/190 (50%), Positives = 135/190 (71%), Gaps = 4/190 (2%)
 Frame = +3

Query: 3    PKSGKKVNVPSDLIAERYPHYMQRDGNCSYHSTSILGEIYDKLKEFQSAVHSVGEIWKLP 182
            PKSG KV +P  L  +++PH++Q+    SYHSTS+LGEIYD++++F++   +  EI KL 
Sbjct: 914  PKSGNKVYIPKRLKVDKFPHFLQKKE--SYHSTSVLGEIYDRVEKFKAEEPAAVEIKKLS 971

Query: 183  AFDAEVPERYMGKWRELYDKYRHEMVEALNKSHDSKNNAANEVIKKYKQLLYEAEDFQES 362
            AF+  +P+  +  W E Y  YR EM EALN S +SKN+ A++VIKKYKQLLYEA D +ES
Sbjct: 972  AFEVGIPDTCLRLWEERYRNYRFEMKEALNTSSESKNDLADQVIKKYKQLLYEAPDMEES 1031

Query: 363  KKDVEELYNEALAIYHVTYNFAINRGDLGKCRFAWKVAGSALCNLHA-FRTKENPIRIL- 536
             +   ++YN+ALAIY VTY++A   GD+ KC FAWKVAG+ALC LHA    KE+  +++ 
Sbjct: 1032 IRSTTDMYNDALAIYCVTYDYAKAIGDVRKCGFAWKVAGAALCKLHAELHAKEHNQKVMA 1091

Query: 537  --PSLLREIL 560
              PS+L ++L
Sbjct: 1092 MSPSILHKLL 1101


>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
            gi|568843311|ref|XP_006475557.1| PREDICTED: probable
            RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
            sinensis] gi|557554498|gb|ESR64512.1| hypothetical
            protein CICLE_v10007331mg [Citrus clementina]
          Length = 1013

 Score =  187 bits (474), Expect = 5e-45
 Identities = 93/184 (50%), Positives = 127/184 (69%)
 Frame = +3

Query: 6    KSGKKVNVPSDLIAERYPHYMQRDGNCSYHSTSILGEIYDKLKEFQSAVHSVGEIWKLPA 185
            KSG KV VP DL  E++P YM+RD + S+ STS+LG IY+ +K +++   SV EIWKLP 
Sbjct: 828  KSGIKVEVPEDLKVEKFPCYMRRDESVSFESTSVLGTIYNTVKSYEAVDRSVTEIWKLPC 887

Query: 186  FDAEVPERYMGKWRELYDKYRHEMVEALNKSHDSKNNAANEVIKKYKQLLYEAEDFQESK 365
            FD  VPE  M KW+  YD+YR EM EA++K    +  AA  VI+KYKQ+LY A +F++S 
Sbjct: 888  FDDGVPEACMTKWKGYYDQYRWEMKEAIDKCTVEREEAAELVIEKYKQILYGAAEFEQST 947

Query: 366  KDVEELYNEALAIYHVTYNFAINRGDLGKCRFAWKVAGSALCNLHAFRTKENPIRILPSL 545
            + +EE+YNEALAIY++TY+ A +R  +  C FAW+VAGSAL   +A R  +  +    S+
Sbjct: 948  RTLEEIYNEALAIYNITYDLAASRRQVSYCSFAWRVAGSALRKFYARRQGDRSMLCSASV 1007

Query: 546  LREI 557
            LREI
Sbjct: 1008 LREI 1011


>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
            gi|568843309|ref|XP_006475556.1| PREDICTED: probable
            RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
            sinensis] gi|557554497|gb|ESR64511.1| hypothetical
            protein CICLE_v10007331mg [Citrus clementina]
          Length = 1015

 Score =  187 bits (474), Expect = 5e-45
 Identities = 93/184 (50%), Positives = 127/184 (69%)
 Frame = +3

Query: 6    KSGKKVNVPSDLIAERYPHYMQRDGNCSYHSTSILGEIYDKLKEFQSAVHSVGEIWKLPA 185
            KSG KV VP DL  E++P YM+RD + S+ STS+LG IY+ +K +++   SV EIWKLP 
Sbjct: 830  KSGIKVEVPEDLKVEKFPCYMRRDESVSFESTSVLGTIYNTVKSYEAVDRSVTEIWKLPC 889

Query: 186  FDAEVPERYMGKWRELYDKYRHEMVEALNKSHDSKNNAANEVIKKYKQLLYEAEDFQESK 365
            FD  VPE  M KW+  YD+YR EM EA++K    +  AA  VI+KYKQ+LY A +F++S 
Sbjct: 890  FDDGVPEACMTKWKGYYDQYRWEMKEAIDKCTVEREEAAELVIEKYKQILYGAAEFEQST 949

Query: 366  KDVEELYNEALAIYHVTYNFAINRGDLGKCRFAWKVAGSALCNLHAFRTKENPIRILPSL 545
            + +EE+YNEALAIY++TY+ A +R  +  C FAW+VAGSAL   +A R  +  +    S+
Sbjct: 950  RTLEEIYNEALAIYNITYDLAASRRQVSYCSFAWRVAGSALRKFYARRQGDRSMLCSASV 1009

Query: 546  LREI 557
            LREI
Sbjct: 1010 LREI 1013


>ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
            gi|550334280|gb|ERP58267.1| hypothetical protein
            POPTR_0007s06560g [Populus trichocarpa]
          Length = 877

 Score =  184 bits (468), Expect = 2e-44
 Identities = 91/186 (48%), Positives = 129/186 (69%), Gaps = 1/186 (0%)
 Frame = +3

Query: 6    KSGKKVNVPSDLIAERYPHYMQRDGNCSYHSTSILGEIYDKLKEFQSAVHSVGEIWKLPA 185
            K G+++ VP  L AE +PH+M ++   +Y STSILG+IYDK+K ++    S  ++WKLP 
Sbjct: 693  KGGRRIEVPEGLKAELFPHFMGKNEKKTYRSTSILGKIYDKVKAYEDMDLSSNDVWKLPC 752

Query: 186  FDAEVPERYMGKWRELYDKYRHEMVEALNKSHDSKNNAANEVIKKYKQLLYEAEDFQESK 365
            FD EV E Y+ KW+ELY +YR EM  AL K+ +  N+ ANEVI+KYK+ LYEA +F  SK
Sbjct: 753  FDDEVHELYLVKWKELYGQYRKEMRNAL-KAGEESNDKANEVIRKYKEFLYEAAEFNLSK 811

Query: 366  KDVEELYNEALAIYHVTYNFAINRGDLGKCRFAWKVAGSALCNLHAFRTK-ENPIRILPS 542
            +  EE++ EA+A+Y V+YN A ++G +G C FAW+VAG ALC L+  + + E P+   PS
Sbjct: 812  RRDEEIFEEAMALYQVSYNHAKSQGVVGNCSFAWRVAGLALCTLYVLKNQGERPMICSPS 871

Query: 543  LLREIL 560
             L+ IL
Sbjct: 872  ALKGIL 877


>ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
            gi|550334279|gb|ERP58266.1| hypothetical protein
            POPTR_0007s06560g [Populus trichocarpa]
          Length = 899

 Score =  184 bits (468), Expect = 2e-44
 Identities = 91/186 (48%), Positives = 129/186 (69%), Gaps = 1/186 (0%)
 Frame = +3

Query: 6    KSGKKVNVPSDLIAERYPHYMQRDGNCSYHSTSILGEIYDKLKEFQSAVHSVGEIWKLPA 185
            K G+++ VP  L AE +PH+M ++   +Y STSILG+IYDK+K ++    S  ++WKLP 
Sbjct: 715  KGGRRIEVPEGLKAELFPHFMGKNEKKTYRSTSILGKIYDKVKAYEDMDLSSNDVWKLPC 774

Query: 186  FDAEVPERYMGKWRELYDKYRHEMVEALNKSHDSKNNAANEVIKKYKQLLYEAEDFQESK 365
            FD EV E Y+ KW+ELY +YR EM  AL K+ +  N+ ANEVI+KYK+ LYEA +F  SK
Sbjct: 775  FDDEVHELYLVKWKELYGQYRKEMRNAL-KAGEESNDKANEVIRKYKEFLYEAAEFNLSK 833

Query: 366  KDVEELYNEALAIYHVTYNFAINRGDLGKCRFAWKVAGSALCNLHAFRTK-ENPIRILPS 542
            +  EE++ EA+A+Y V+YN A ++G +G C FAW+VAG ALC L+  + + E P+   PS
Sbjct: 834  RRDEEIFEEAMALYQVSYNHAKSQGVVGNCSFAWRVAGLALCTLYVLKNQGERPMICSPS 893

Query: 543  LLREIL 560
             L+ IL
Sbjct: 894  ALKGIL 899


>ref|XP_002310028.1| hypothetical protein POPTRDRAFT_654879 [Populus trichocarpa]
          Length = 189

 Score =  178 bits (451), Expect = 2e-42
 Identities = 90/183 (49%), Positives = 124/183 (67%), Gaps = 1/183 (0%)
 Frame = +3

Query: 15  KKVNVPSDLIAERYPHYMQRDGNCSYHSTSILGEIYDKLKEFQSAVHSVGEIWKLPAFDA 194
           K++ VP  L AE +PH+M ++   +Y STSILG+IYDK+K ++    S  ++WKLP FD 
Sbjct: 8   KQIEVPEGLKAELFPHFMGKNEKKTYRSTSILGKIYDKVKAYEDMDLSSNDVWKLPCFDG 67

Query: 195 EVPERYMGKWRELYDKYRHEMVEALNKSHDSKNNAANEVIKKYKQLLYEAEDFQESKKDV 374
           EV E  + KW+ LY +YR EM  AL    + KNN ANEVIKKYK++LYEA +F  S++  
Sbjct: 68  EVHESCLVKWKGLYGQYRTEMRNALQAGKE-KNNEANEVIKKYKEILYEAAEFNLSRRRD 126

Query: 375 EELYNEALAIYHVTYNFAINRGDLGKCRFAWKVAGSALCNLHAFRTK-ENPIRILPSLLR 551
           EE++ EA A+Y VTYN A ++G +G C FAW+VAG ALC L+  + + E P+   PS L+
Sbjct: 127 EEIFEEARALYQVTYNHAKSQGVVGNCSFAWRVAGLALCTLYVLKNQGERPMICSPSALK 186

Query: 552 EIL 560
            IL
Sbjct: 187 GIL 189


>ref|XP_004288887.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Fragaria
            vesca subsp. vesca]
          Length = 1405

 Score =  177 bits (450), Expect = 3e-42
 Identities = 95/187 (50%), Positives = 127/187 (67%), Gaps = 2/187 (1%)
 Frame = +3

Query: 6    KSGKKVNVPSDLIAERYPHYMQRDGNCSYHSTSILGEIYDKLKEFQSAVHSVGEIWKLPA 185
            K G KV+VP +L    +PHYM +  N SY STSILG IY+++ E Q+   S+ E+ KLPA
Sbjct: 1221 KKGVKVDVPKELKVSCFPHYMGK--NRSYPSTSILGSIYNRVDEHQTEDRSLKEVEKLPA 1278

Query: 186  FDA-EVPERYMGKWRELYDKYRHEMVEALNKSH-DSKNNAANEVIKKYKQLLYEAEDFQE 359
            FD  EVP+  + KW EL+ +YR EM  AL+     SKN +A+ VI+KY+++LYEA DF+E
Sbjct: 1279 FDENEVPDACLDKWAELHRQYRKEMASALDDDDKQSKNQSADVVIRKYRKILYEANDFEE 1338

Query: 360  SKKDVEELYNEALAIYHVTYNFAINRGDLGKCRFAWKVAGSALCNLHAFRTKENPIRILP 539
            S++ +EE+YNEA AIYHV Y+ A   G++  C FAW+VAG ALC LHA    E    I+ 
Sbjct: 1339 SRRPIEEIYNEAHAIYHVCYDHAKRVGNVKVCSFAWRVAGKALCQLHARNNNERFCTIVS 1398

Query: 540  SLLREIL 560
            S+L EIL
Sbjct: 1399 SVLMEIL 1405


>gb|EMJ05474.1| hypothetical protein PRUPE_ppa001584mg [Prunus persica]
          Length = 798

 Score =  176 bits (447), Expect = 6e-42
 Identities = 93/188 (49%), Positives = 128/188 (68%), Gaps = 2/188 (1%)
 Frame = +3

Query: 3    PKSGKKVNVPSDLIAERYPHYMQRDGNCSYHSTSILGEIYDKLKEFQSAVHSVGEIWKLP 182
            PK G KV VP +L +  +PHYM+R    SY STSILG IYD +  +Q+   S+ E+ KLP
Sbjct: 613  PKKGGKVVVPGELKSNLFPHYMERVN--SYKSTSILGLIYDTVNAYQAEDASIKEVKKLP 670

Query: 183  AFDAEVPERYMGKWRELYDKYRHEMVEAL-NKSHDSKNNAANEVIKKYKQLLYE-AEDFQ 356
             FD EVPE  + KWRE Y  YR EM  A+ +   DSKNNAA++V++KYK++LY  AED +
Sbjct: 671  MFDVEVPEECLKKWREHYQHYRSEMSSAMQDDDRDSKNNAADKVLRKYKEILYGGAEDLE 730

Query: 357  ESKKDVEELYNEALAIYHVTYNFAINRGDLGKCRFAWKVAGSALCNLHAFRTKENPIRIL 536
             S + + E+++EALAIY VTY+ AI++G +GKC FAWKVAGSALC  +  +     I   
Sbjct: 731  NSTRPLHEIFDEALAIYRVTYDHAISQGAVGKCCFAWKVAGSALCKYYMNKQGARTIEAS 790

Query: 537  PSLLREIL 560
             S+L++++
Sbjct: 791  FSVLKDLV 798


>gb|EXB59780.1| putative RNA-dependent RNA polymerase 3 [Morus notabilis]
          Length = 521

 Score =  176 bits (445), Expect = 1e-41
 Identities = 91/182 (50%), Positives = 122/182 (67%), Gaps = 1/182 (0%)
 Frame = +3

Query: 18  KVNVPSDLIAERYPHYMQRDGNCSYHSTSILGEIYDKLKEFQSAVHSVGEIWKLPAFDAE 197
           +V VP +L   R+PHYM++    S+HS SILG IYD++  +Q   HS  EI+KLP F+ E
Sbjct: 342 QVEVPRELKPNRFPHYMEKQN--SFHSRSILGWIYDEVDAYQLEDHSNKEIFKLPHFEVE 399

Query: 198 VPERYMGKWRELYDKYRHEMVEALNKSHDSKNNAANEVIKKYKQLLYEAEDFQESKKDVE 377
           VPE  + KW+  Y  YR +M +AL      K  AA EV +KYK+LLY AE+ +ES K +E
Sbjct: 400 VPEACLTKWKAHYKDYRDDMCDALLAKDVGKTEAAEEVKRKYKRLLYGAEELEESTKKME 459

Query: 378 ELYNEALAIYHVTYNFAINRGDLGKCRFAWKVAGSALCNLHAF-RTKENPIRILPSLLRE 554
           E+YNEALAIYHV Y++AI++  +  C FAW +AGSAL  LHAF +  E     LPS+L+E
Sbjct: 460 EIYNEALAIYHVCYDYAISQRKVSYCSFAWNIAGSALLKLHAFKKIGERAFFCLPSVLKE 519

Query: 555 IL 560
           +L
Sbjct: 520 VL 521


>emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]
          Length = 1202

 Score =  172 bits (435), Expect = 2e-40
 Identities = 86/185 (46%), Positives = 121/185 (65%)
 Frame = +3

Query: 3    PKSGKKVNVPSDLIAERYPHYMQRDGNCSYHSTSILGEIYDKLKEFQSAVHSVGEIWKLP 182
            PKSG KVNV  +L AE++PH+M R+   SYHSTSILG+IYD ++ FQ    S  +     
Sbjct: 1027 PKSGMKVNVSKELKAEKFPHFMGRES--SYHSTSILGQIYDAVESFQPENQSTKDA---- 1080

Query: 183  AFDAEVPERYMGKWRELYDKYRHEMVEALNKSHDSKNNAANEVIKKYKQLLYEAEDFQES 362
                 VP+  +  W++ YD+YR EM  AL    ++K+  A EVI KYKQ+LY A +F+ES
Sbjct: 1081 -----VPQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGAAEFEES 1135

Query: 363  KKDVEELYNEALAIYHVTYNFAINRGDLGKCRFAWKVAGSALCNLHAFRTKENPIRILPS 542
             + +E++++EALAIYHVTY FAIN   +  C F W+VAG ALC L+  +  E  +  +PS
Sbjct: 1136 PRKLEDIFDEALAIYHVTYEFAINGARVSYCNFPWRVAGRALCKLYTVKLGEKSMVCVPS 1195

Query: 543  LLREI 557
            +LR++
Sbjct: 1196 VLRQV 1200


>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
            sativus]
          Length = 1056

 Score =  171 bits (432), Expect = 4e-40
 Identities = 91/184 (49%), Positives = 122/184 (66%)
 Frame = +3

Query: 6    KSGKKVNVPSDLIAERYPHYMQRDGNCSYHSTSILGEIYDKLKEFQSAVHSVGEIWKLPA 185
            K GKK+ VP  L A   PH+M+R  N SY STSILG+I+D    +Q  V ++ E+ KLP 
Sbjct: 874  KGGKKIEVPKHLKAGTLPHFMERGKN-SYVSTSILGQIFDTANMYQEEVPNI-EVQKLPC 931

Query: 186  FDAEVPERYMGKWRELYDKYRHEMVEALNKSHDSKNNAANEVIKKYKQLLYEAEDFQESK 365
            F+ E+PE    KW+ LY+ YR +MV+A+    D+KN AA   IKKYK++LY AE+ + S 
Sbjct: 932  FEEELPEYIFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSP 991

Query: 366  KDVEELYNEALAIYHVTYNFAINRGDLGKCRFAWKVAGSALCNLHAFRTKENPIRILPSL 545
            +  EE+Y EALAIY VTY+ A++R  +  C FAWKVAGSAL  L+A +  E     LPS+
Sbjct: 992  RSNEEVYQEALAIYQVTYDHAMSR-SVRNCGFAWKVAGSALFKLYAIKHSERSFHCLPSV 1050

Query: 546  LREI 557
            +REI
Sbjct: 1051 MREI 1054


>ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [Amborella trichopoda]
            gi|548857326|gb|ERN15132.1| hypothetical protein
            AMTR_s00056p00110240 [Amborella trichopoda]
          Length = 988

 Score =  169 bits (427), Expect = 1e-39
 Identities = 91/186 (48%), Positives = 123/186 (66%)
 Frame = +3

Query: 3    PKSGKKVNVPSDLIAERYPHYMQRDGNCSYHSTSILGEIYDKLKEFQSAVHSVGEIWKLP 182
            PKSGKKV VP DL  ERYPH+M+R     Y STSILG+IYD +   Q  V    +I  LP
Sbjct: 806  PKSGKKVEVPKDLKPERYPHFMER--TYQYTSTSILGQIYDLVASAQMDV-PCEDIELLP 862

Query: 183  AFDAEVPERYMGKWRELYDKYRHEMVEALNKSHDSKNNAANEVIKKYKQLLYEAEDFQES 362
             F  EV    M KW+ LY +YR EM +AL+ +   K+NA +EVI+ YK++LY A++++E 
Sbjct: 863  CFLEEVEPSGMEKWKGLYAQYRDEMNKALSSTDQKKSNA-DEVIQNYKKILYGAQEYEER 921

Query: 363  KKDVEELYNEALAIYHVTYNFAINRGDLGKCRFAWKVAGSALCNLHAFRTKENPIRILPS 542
             +  EE++ EA  IY ++Y +A  + D+ KC FAWKVAG ALC LHA + K+N I  L S
Sbjct: 922  TRPREEIFREACEIYAISYFYAKEKSDIAKCGFAWKVAGCALCELHALKQKKNSITCLSS 981

Query: 543  LLREIL 560
            +L+E+L
Sbjct: 982  VLQELL 987


>ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine max]
          Length = 988

 Score =  166 bits (419), Expect = 1e-38
 Identities = 87/187 (46%), Positives = 126/187 (67%), Gaps = 2/187 (1%)
 Frame = +3

Query: 3    PKSGKKVNVPSDLIAERYPHYMQRDGNCSYHSTSILGEIYDKLKEFQSAVHSVGEIWKLP 182
            PKSG+KV VP+DLIAE +PHYM++D   S+ STSILG IYD++ E       VGEIWKLP
Sbjct: 802  PKSGRKVQVPNDLIAELFPHYMEKDK--SFTSTSILGLIYDEV-EIWLENDMVGEIWKLP 858

Query: 183  AFDAEVPERYMGKWRELYDKYRHEMVEALNKSHDSKNNA-ANEVIKKYKQLLYEAE-DFQ 356
             FD EVP   + KW+  Y++YR +M +ALN    SK++  A EV +KYK+  Y    + +
Sbjct: 859  CFDVEVPPSCLEKWKTKYEEYRKDMTDALNLKDKSKSHEEAAEVNRKYKEEFYGPTLEME 918

Query: 357  ESKKDVEELYNEALAIYHVTYNFAINRGDLGKCRFAWKVAGSALCNLHAFRTKENPIRIL 536
               K + +++NEALA+Y+V+Y +A+ + ++ +C FAWK+AGSAL  L+  +  E  +   
Sbjct: 919  GCLKSIGDIFNEALAVYNVSYEYAMLKKEVKRCGFAWKIAGSALTRLYIIKQNEKALNCD 978

Query: 537  PSLLREI 557
            PS++REI
Sbjct: 979  PSVVREI 985


>ref|XP_004288888.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Fragaria
            vesca subsp. vesca]
          Length = 1068

 Score =  162 bits (409), Expect = 2e-37
 Identities = 89/197 (45%), Positives = 127/197 (64%), Gaps = 12/197 (6%)
 Frame = +3

Query: 6    KSGKKVNVPSDLIAERYPHYMQR-DGNCSYHSTSILGEIYDKLKEFQSAVHSVGEIWKLP 182
            K G KV VP DL   R+PHYM +     +  S+SILGEIYD + + Q+ +  + EI KLP
Sbjct: 874  KKGVKVEVPKDLKVPRFPHYMDKLKEEKTETSSSILGEIYDGVGKCQAKLAFLTEIKKLP 933

Query: 183  AFDA-EVPERYMGKWRELYDKYRHEMVEALNKSHDSKNNAANEVIKKYKQL--------- 332
             FD  +VPE  +  WR+LY++YR EM  A+  ++  K+ AA+ VI  YK++         
Sbjct: 934  IFDINQVPEHCLNNWRKLYEQYRGEMSSAMKNAN--KDQAASSVIGYYKEVIIATLFLGL 991

Query: 333  -LYEAEDFQESKKDVEELYNEALAIYHVTYNFAINRGDLGKCRFAWKVAGSALCNLHAFR 509
             LY+A DF+ S K ++ + +EA AIYHV Y++AIN+ D+ +C FAWKVAG ALC LHA +
Sbjct: 992  KLYDAADFEHSSKPIDAILDEAHAIYHVCYDYAINKRDVQRCSFAWKVAGKALCELHAKK 1051

Query: 510  TKENPIRILPSLLREIL 560
            T E  + I PS+L+++L
Sbjct: 1052 TGEKWLSIAPSVLQQLL 1068


>ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Populus trichocarpa]
            gi|550336519|gb|ERP59562.1| hypothetical protein
            POPTR_0006s17780g [Populus trichocarpa]
          Length = 866

 Score =  159 bits (401), Expect = 1e-36
 Identities = 86/186 (46%), Positives = 118/186 (63%), Gaps = 1/186 (0%)
 Frame = +3

Query: 6    KSGKKVNVPSDLIAERYPHYMQRDGNCSYHSTSILGEIYDKLKEFQSAVHSVGEIWKLPA 185
            K G+K+ VP  L AE +PH+M++    +Y STSILG+IYDK+K ++    S         
Sbjct: 693  KGGRKIEVPEALKAELFPHFMEKHEKKTYRSTSILGKIYDKVKAYEDMDLS--------- 743

Query: 186  FDAEVPERYMGKWRELYDKYRHEMVEALNKSHDSKNNAANEVIKKYKQLLYEAEDFQESK 365
              + V E  + KW+ LY +YR EM  AL    + KNN ANEVIKKYK++LYEA +F  S+
Sbjct: 744  --SNVHESCLVKWKGLYGQYRTEMRNALQAGKE-KNNEANEVIKKYKEILYEAAEFNLSR 800

Query: 366  KDVEELYNEALAIYHVTYNFAINRGDLGKCRFAWKVAGSALCNLHAFRT-KENPIRILPS 542
            +  EE++ EA A+Y VTYN A  +G +GKC FAW+VAG ALC L+  +  +E P+   PS
Sbjct: 801  RRDEEIFEEARALYQVTYNHAKRQGAVGKCGFAWRVAGLALCTLYVLKNQEERPLICSPS 860

Query: 543  LLREIL 560
             L+ IL
Sbjct: 861  ALKGIL 866


>ref|XP_002336131.1| hypothetical protein POPTRDRAFT_584507 [Populus trichocarpa]
          Length = 211

 Score =  159 bits (401), Expect = 1e-36
 Identities = 86/186 (46%), Positives = 118/186 (63%), Gaps = 1/186 (0%)
 Frame = +3

Query: 6   KSGKKVNVPSDLIAERYPHYMQRDGNCSYHSTSILGEIYDKLKEFQSAVHSVGEIWKLPA 185
           K G+K+ VP  L AE +PH+M++    +Y STSILG+IYDK+K ++    S         
Sbjct: 38  KGGRKIEVPEALKAELFPHFMEKHEKKTYRSTSILGKIYDKVKAYEDMDLS--------- 88

Query: 186 FDAEVPERYMGKWRELYDKYRHEMVEALNKSHDSKNNAANEVIKKYKQLLYEAEDFQESK 365
             + V E  + KW+ LY +YR EM  AL    + KNN ANEVIKKYK++LYEA +F  S+
Sbjct: 89  --SNVHESCLVKWKGLYGQYRTEMRNALQAGKE-KNNEANEVIKKYKEILYEAAEFNLSR 145

Query: 366 KDVEELYNEALAIYHVTYNFAINRGDLGKCRFAWKVAGSALCNLHAFRT-KENPIRILPS 542
           +  EE++ EA A+Y VTYN A  +G +GKC FAW+VAG ALC L+  +  +E P+   PS
Sbjct: 146 RRDEEIFEEARALYQVTYNHAKRQGAVGKCGFAWRVAGLALCTLYVLKNQEERPLICSPS 205

Query: 543 LLREIL 560
            L+ IL
Sbjct: 206 ALKGIL 211


>gb|EOY15730.1| RNA-dependent RNA polymerase family protein, putative isoform 1
           [Theobroma cacao]
          Length = 328

 Score =  158 bits (400), Expect = 2e-36
 Identities = 82/189 (43%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
 Frame = +3

Query: 3   PKSGKKVNVPSDLIAERYPHYMQRDGNCSYHSTSILGEIYDKLKEFQSAVHSVGEIWKLP 182
           PK+GKK+ VP +L A+ +PHY++R    S+ S SILG+IYD +K +   +    E+ KLP
Sbjct: 141 PKTGKKIEVPRELRADAFPHYLERQK--SFKSASILGKIYDFVKSYGEELPRK-EVRKLP 197

Query: 183 AFDAEVPERYMGKWRELYDKYRHEMVEALN----KSHDSKNNAANEVIKKYKQLLYEAED 350
            FD   P+    KW ELY +YR +M + L     KS + ++ AAN V  KYKQ LY    
Sbjct: 198 CFDVGFPQDCREKWTELYKQYREDMTQTLQTLDGKSKELRDVAANAVYNKYKQELYGGAV 257

Query: 351 FQESKKDVEELYNEALAIYHVTYNFAINRGDLGKCRFAWKVAGSALCNLHAFRTKENPIR 530
            ++ ++ ++++Y EALAIY+++Y++AI   D+GKC FAWKVAGSAL +L+A    E  + 
Sbjct: 258 LEQRQRPLDQIYKEALAIYNISYDYAIRIDDVGKCGFAWKVAGSALLSLYASEQGEKTLS 317

Query: 531 ILPSLLREI 557
             PS+L+E+
Sbjct: 318 CAPSVLKEL 326