BLASTX nr result
ID: Rauwolfia21_contig00015108
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00015108
(227 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008081837.1| cytochrome b6-f complex subunit IV (chloropl... 91 2e-16
gb|AFA26973.1| cytochrome b6/f complex subunit IV, partial [Ecde... 91 2e-16
ref|YP_740148.1| cytochrome b6/f complex subunit IV [Daucus caro... 91 2e-16
ref|YP_008081681.1| cytochrome b6-f complex subunit IV (chloropl... 91 2e-16
ref|YP_003587496.1| cytochrome b6/f complex subunit 4 [Oncidium ... 91 2e-16
ref|YP_001294383.1| cytochrome b6/f complex subunit IV [Dioscore... 91 2e-16
gb|AHI87559.1| cytochrome b6/f complex subunit IV (chloroplast) ... 90 3e-16
gb|AHA13041.1| cytochrome b6/f complex subunit IV [Costus pulver... 90 3e-16
ref|YP_358612.1| cytochrome b6/f complex subunit IV [Phalaenopsi... 90 3e-16
ref|YP_008854541.1| cytochrome b6/f complex subunit IV [Ravenala... 90 4e-16
ref|YP_008592519.1| cytochrome b6/f complex subunit IV (chloropl... 90 4e-16
ref|YP_008438985.1| cytochrome b6/f complex subunit IV [Medicago... 90 4e-16
gb|AGE93400.1| cytochrome b6/f complex subunit IV [Alpinia zerum... 90 4e-16
ref|YP_007475650.1| cytochrome b6/f complex subunit IV [Heliconi... 90 4e-16
ref|YP_052780.1| cytochrome b6/f complex subunit IV [Oryza nivar... 90 4e-16
ref|NP_039416.1| cytochrome b6/f complex subunit IV [Oryza sativ... 90 4e-16
ref|YP_008757471.1| cytochrome b6-f complex subunit 4 (chloropla... 90 4e-16
gb|AFA26992.1| cytochrome b6/f complex subunit IV, partial [Pota... 90 4e-16
gb|AFA26981.1| cytochrome b6/f complex subunit IV, partial [Join... 90 4e-16
ref|XP_003606055.1| Photosystem II CP47 chlorophyll apoprotein [... 90 4e-16
>ref|YP_008081837.1| cytochrome b6-f complex subunit IV (chloroplast) [Cymbidium
tracyanum] gi|520850508|ref|YP_008081603.1| cytochrome
b6-f complex subunit IV (chloroplast) [Cymbidium
aloifolium] gi|482662029|gb|AGK25258.1| cytochrome b6-f
complex subunit IV (chloroplast) [Cymbidium aloifolium]
gi|482662424|gb|AGK25648.1| cytochrome b6-f complex
subunit IV (chloroplast) [Cymbidium tracyanum]
Length = 162
Score = 90.9 bits (224), Expect = 2e-16
Identities = 43/56 (76%), Positives = 51/56 (91%)
Frame = -3
Query: 177 MIMEVTVPVGLLTVHFLENVNKFQNLFCRPVATTIFLIGTAVALWLGVGATLPLLK 10
+++ V+VP+GLLTV FLENVNKFQN F RPVATT+FLIGTAVALWLG+GATLP+ K
Sbjct: 98 VLLMVSVPIGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIEK 153
>gb|AFA26973.1| cytochrome b6/f complex subunit IV, partial [Ecdeiocolea
monostachya]
Length = 158
Score = 90.9 bits (224), Expect = 2e-16
Identities = 43/56 (76%), Positives = 51/56 (91%)
Frame = -3
Query: 177 MIMEVTVPVGLLTVHFLENVNKFQNLFCRPVATTIFLIGTAVALWLGVGATLPLLK 10
+++ V+VP+GLLTV FLENVNKFQN F RPVATT+FLIGTAVALWLG+GATLP+ K
Sbjct: 96 VLLMVSVPMGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIAK 151
>ref|YP_740148.1| cytochrome b6/f complex subunit IV [Daucus carota]
gi|122221304|sp|Q0G9T1.1|PETD_DAUCA RecName:
Full=Cytochrome b6-f complex subunit 4; AltName: Full=17
kDa polypeptide gi|113200938|gb|ABI32454.1| cytochrome
b6/f complex subunit IV [Daucus carota]
Length = 160
Score = 90.9 bits (224), Expect = 2e-16
Identities = 44/56 (78%), Positives = 51/56 (91%)
Frame = -3
Query: 177 MIMEVTVPVGLLTVHFLENVNKFQNLFCRPVATTIFLIGTAVALWLGVGATLPLLK 10
+++ V+VPVGLLTV FLENVNKFQN F RPVATT+FLIGTAVALWLG+GATLP+ K
Sbjct: 98 VLLMVSVPVGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDK 153
>ref|YP_008081681.1| cytochrome b6-f complex subunit IV (chloroplast) [Cymbidium
sinense] gi|512721419|ref|YP_008081759.1| cytochrome
b6-f complex subunit IV (chloroplast) [Cymbidium
tortisepalum] gi|482662108|gb|AGK25336.1| cytochrome
b6-f complex subunit IV (chloroplast) [Cymbidium
sinense] gi|482662187|gb|AGK25414.1| cytochrome b6-f
complex subunit IV (chloroplast) [Cymbidium
tortisepalum] gi|482662266|gb|AGK25492.1| cytochrome
b6-f complex subunit IV (chloroplast) [Cymbidium
tortisepalum] gi|482662503|gb|AGK25726.1| cytochrome
b6-f complex subunit IV (chloroplast) [Cymbidium
tortisepalum]
Length = 162
Score = 90.5 bits (223), Expect = 2e-16
Identities = 43/56 (76%), Positives = 51/56 (91%)
Frame = -3
Query: 177 MIMEVTVPVGLLTVHFLENVNKFQNLFCRPVATTIFLIGTAVALWLGVGATLPLLK 10
+++ V+VP+GLLTV FLENVNKFQN F RPVATT+FLIGTAVALWLG+GATLP+ K
Sbjct: 98 VLLMVSVPIGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDK 153
>ref|YP_003587496.1| cytochrome b6/f complex subunit 4 [Oncidium hybrid cultivar]
gi|254833134|gb|ACT83137.1| cytochrome b6/f complex
subunit 4 [Oncidium hybrid cultivar]
Length = 163
Score = 90.5 bits (223), Expect = 2e-16
Identities = 43/56 (76%), Positives = 51/56 (91%)
Frame = -3
Query: 177 MIMEVTVPVGLLTVHFLENVNKFQNLFCRPVATTIFLIGTAVALWLGVGATLPLLK 10
+++ V+VP+GLLTV FLENVNKFQN F RPVATT+FLIGTAVALWLG+GATLP+ K
Sbjct: 98 VLLMVSVPIGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDK 153
>ref|YP_001294383.1| cytochrome b6/f complex subunit IV [Dioscorea elephantipes]
gi|148668076|gb|ABR01460.1| cytochrome b6/f complex
subunit IV [Dioscorea elephantipes]
Length = 175
Score = 90.5 bits (223), Expect = 2e-16
Identities = 43/56 (76%), Positives = 51/56 (91%)
Frame = -3
Query: 177 MIMEVTVPVGLLTVHFLENVNKFQNLFCRPVATTIFLIGTAVALWLGVGATLPLLK 10
+++ V+VP+GLLTV FLENVNKFQN F RPVATT+FLIGTAVALWLG+GATLP+ K
Sbjct: 98 VLLMVSVPIGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDK 153
>gb|AHI87559.1| cytochrome b6/f complex subunit IV (chloroplast) [Chionographis
japonica]
Length = 160
Score = 90.1 bits (222), Expect = 3e-16
Identities = 42/56 (75%), Positives = 51/56 (91%)
Frame = -3
Query: 177 MIMEVTVPVGLLTVHFLENVNKFQNLFCRPVATTIFLIGTAVALWLGVGATLPLLK 10
+++ V+VP+GLLTV FLENVNKFQN F RPVATT+FL+GTAVALWLG+GATLP+ K
Sbjct: 98 VLLMVSVPIGLLTVPFLENVNKFQNPFRRPVATTVFLVGTAVALWLGIGATLPIDK 153
>gb|AHA13041.1| cytochrome b6/f complex subunit IV [Costus pulverulentus]
Length = 160
Score = 90.1 bits (222), Expect = 3e-16
Identities = 43/56 (76%), Positives = 51/56 (91%)
Frame = -3
Query: 177 MIMEVTVPVGLLTVHFLENVNKFQNLFCRPVATTIFLIGTAVALWLGVGATLPLLK 10
+++ V+VP+GLLTV FLENVNKFQN F RPVATT+FLIGTAVALWLG+GATLP+ K
Sbjct: 98 VLLMVSVPMGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIEK 153
>ref|YP_358612.1| cytochrome b6/f complex subunit IV [Phalaenopsis aphrodite subsp.
formosana] gi|385153462|ref|YP_006073296.1| cytochrome
b6/f complex subunit IV (chloroplast) [Phalaenopsis
equestris] gi|85542134|sp|Q3BAK6.1|PETD_PHAAO RecName:
Full=Cytochrome b6-f complex subunit 4; AltName: Full=17
kDa polypeptide gi|58802810|gb|AAW82530.1| cytochrome
b6/f complex subunit IV [Phalaenopsis aphrodite subsp.
formosana] gi|329668827|gb|AEB96274.1| cytochrome b6/f
complex subunit IV (chloroplast) [Phalaenopsis
equestris]
Length = 163
Score = 90.1 bits (222), Expect = 3e-16
Identities = 43/56 (76%), Positives = 51/56 (91%)
Frame = -3
Query: 177 MIMEVTVPVGLLTVHFLENVNKFQNLFCRPVATTIFLIGTAVALWLGVGATLPLLK 10
+++ V+VP+GLLTV FLENVNKFQN F RPVATT+FLIGTAVALWLG+GATLP+ K
Sbjct: 98 VLLMVSVPLGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIEK 153
>ref|YP_008854541.1| cytochrome b6/f complex subunit IV [Ravenala madagascariensis]
gi|557637029|gb|AHA12630.1| cytochrome b6/f complex
subunit IV [Ravenala madagascariensis]
Length = 160
Score = 89.7 bits (221), Expect = 4e-16
Identities = 43/56 (76%), Positives = 51/56 (91%)
Frame = -3
Query: 177 MIMEVTVPVGLLTVHFLENVNKFQNLFCRPVATTIFLIGTAVALWLGVGATLPLLK 10
+++ V+VP+GLLTV FLENVNKFQN F RPVATT+FLIGTAVALWLG+GATLP+ K
Sbjct: 98 VLLMVSVPMGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDK 153
>ref|YP_008592519.1| cytochrome b6/f complex subunit IV (chloroplast) [Andrographis
paniculata] gi|532164867|gb|AGT79877.1| cytochrome b6/f
complex subunit IV (chloroplast) [Andrographis
paniculata]
Length = 160
Score = 89.7 bits (221), Expect = 4e-16
Identities = 44/56 (78%), Positives = 50/56 (89%)
Frame = -3
Query: 177 MIMEVTVPVGLLTVHFLENVNKFQNLFCRPVATTIFLIGTAVALWLGVGATLPLLK 10
+++ V+VP GLLTV FLENVNKFQN F RPVATTIFLIGTAVALWLG+GATLP+ K
Sbjct: 98 VLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTIFLIGTAVALWLGIGATLPIDK 153
>ref|YP_008438985.1| cytochrome b6/f complex subunit IV [Medicago truncatula]
gi|533310016|ref|YP_008439061.1| cytochrome b6/f complex
subunit IV [Medicago truncatula]
gi|552541227|ref|YP_008439137.1| cytochrome b6/f complex
subunit IV [Medicago truncatula]
gi|404332312|gb|AFR59944.1| cytochrome b6/f complex
subunit IV [Medicago truncatula]
gi|404332389|gb|AFR60020.1| cytochrome b6/f complex
subunit IV [Medicago truncatula]
gi|404332466|gb|AFR60096.1| cytochrome b6/f complex
subunit IV [Medicago truncatula]
Length = 160
Score = 89.7 bits (221), Expect = 4e-16
Identities = 43/56 (76%), Positives = 50/56 (89%)
Frame = -3
Query: 177 MIMEVTVPVGLLTVHFLENVNKFQNLFCRPVATTIFLIGTAVALWLGVGATLPLLK 10
+++ V+VPVGLLTV FLENVNKFQN F RPVATT+FLIGT VALWLG+GATLP+ K
Sbjct: 98 VLLMVSVPVGLLTVPFLENVNKFQNPFRRPVATTVFLIGTVVALWLGIGATLPIEK 153
>gb|AGE93400.1| cytochrome b6/f complex subunit IV [Alpinia zerumbet]
Length = 160
Score = 89.7 bits (221), Expect = 4e-16
Identities = 43/56 (76%), Positives = 51/56 (91%)
Frame = -3
Query: 177 MIMEVTVPVGLLTVHFLENVNKFQNLFCRPVATTIFLIGTAVALWLGVGATLPLLK 10
+++ V+VP+GLLTV FLENVNKFQN F RPVATT+FLIGTAVALWLG+GATLP+ K
Sbjct: 98 VLLMVSVPMGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDK 153
>ref|YP_007475650.1| cytochrome b6/f complex subunit IV [Heliconia collinsiana]
gi|449326128|gb|AGE92714.1| cytochrome b6/f complex
subunit IV [Heliconia collinsiana]
gi|557637187|gb|AHA12786.1| cytochrome b6/f complex
subunit IV [Canna indica]
Length = 160
Score = 89.7 bits (221), Expect = 4e-16
Identities = 43/56 (76%), Positives = 51/56 (91%)
Frame = -3
Query: 177 MIMEVTVPVGLLTVHFLENVNKFQNLFCRPVATTIFLIGTAVALWLGVGATLPLLK 10
+++ V+VP+GLLTV FLENVNKFQN F RPVATT+FLIGTAVALWLG+GATLP+ K
Sbjct: 98 VLLMVSVPMGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDK 153
>ref|YP_052780.1| cytochrome b6/f complex subunit IV [Oryza nivara]
gi|374249297|ref|YP_005088040.1| petD gene product
[Leersia tisserantii] gi|374249381|ref|YP_005088563.1|
petD gene product (chloroplast) [Phyllostachys
propinqua] gi|374249650|ref|YP_005089177.1| petD gene
product [Rhynchoryza subulata]
gi|68565733|sp|Q6ENE3.1|PETD_ORYNI RecName:
Full=Cytochrome b6-f complex subunit 4; AltName: Full=17
kDa polypeptide gi|49615026|dbj|BAD26809.1| cytochrome
b6/f complex subunit IV [Oryza nivara]
gi|346228334|gb|AEO21208.1| cytochrome b6/f complex
subunit IV [Leersia tisserantii]
gi|346228418|gb|AEO21291.1| cytochrome b6/f complex
subunit IV (chloroplast) [Phyllostachys propinqua]
gi|346228502|gb|AEO21374.1| cytochrome b6/f complex
subunit IV [Rhynchoryza subulata]
Length = 160
Score = 89.7 bits (221), Expect = 4e-16
Identities = 43/56 (76%), Positives = 50/56 (89%)
Frame = -3
Query: 177 MIMEVTVPVGLLTVHFLENVNKFQNLFCRPVATTIFLIGTAVALWLGVGATLPLLK 10
+++ V+VP GLLTV FLENVNKFQN F RPVATT+FLIGTAVALWLG+GATLP+ K
Sbjct: 98 VLLMVSVPTGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIEK 153
>ref|NP_039416.1| cytochrome b6/f complex subunit IV [Oryza sativa Japonica Group]
gi|253729585|ref|YP_003029769.1| PetD [Bambusa oldhamii]
gi|339906482|ref|YP_004733274.1| cytochrome b6/f complex
subunit IV [Indocalamus longiauritus]
gi|340034056|ref|YP_004733608.1| cytochrome b6/f complex
subunit IV [Phyllostachys edulis]
gi|340034227|ref|YP_004733790.1| cytochrome b6/f complex
subunit IV [Acidosasa purpurea]
gi|340034395|ref|YP_004734008.1| cytochrome b6/f complex
subunit IV [Phyllostachys nigra var. henonis]
gi|340034480|ref|YP_004734131.1| cytochrome b6/f complex
subunit IV [Bambusa emeiensis]
gi|570700342|ref|YP_008994004.1| cytochrome b6/f complex
subunit IV (chloroplast) [Pharus lappulaceus]
gi|148880106|sp|P0C317.1|PETD_ORYSA RecName:
Full=Cytochrome b6-f complex subunit 4; AltName: Full=17
kDa polypeptide gi|148880107|sp|P0C318.1|PETD_ORYSI
RecName: Full=Cytochrome b6-f complex subunit 4;
AltName: Full=17 kDa polypeptide
gi|148880108|sp|P0C319.1|PETD_ORYSJ RecName:
Full=Cytochrome b6-f complex subunit 4; AltName: Full=17
kDa polypeptide gi|669083|emb|CAA33978.1| cytochrome b/f
[Oryza sativa Japonica Group]
gi|56784278|dbj|BAD81960.1| Chloroplast cytochrome b/f
[Oryza sativa Japonica Group]
gi|246367095|gb|ACS94706.1| PetD [Bambusa oldhamii]
gi|307133916|gb|ADN32921.1| cytochrome b6/f complex
subunit IV [Phyllostachys nigra var. henonis]
gi|309321647|gb|ADO65172.1| cytochrome b6/f complex
subunit IV [Acidosasa purpurea]
gi|309321815|gb|ADO65338.1| cytochrome b6/f complex
subunit IV [Indocalamus longiauritus]
gi|309321898|gb|ADO65420.1| cytochrome b6/f complex
subunit IV [Phyllostachys edulis]
gi|309321983|gb|ADO65504.1| cytochrome b6/f complex
subunit IV [Bambusa emeiensis]
gi|441480364|gb|AGC38275.1| cytochrome b6/f complex
subunit IV (chloroplast) [Cryptochloa strictiflora]
gi|449020286|gb|AGE65783.1| cytochrome b6/f complex
subunit IV (chloroplast) [Pharus lappulaceus]
gi|544186524|gb|AGW04470.1| cytochrome b6/f complex
subunit IV [Astephanus triflorus]
gi|557637358|gb|AHA12955.1| cytochrome b6/f complex
subunit IV [Monocostus uniflorus]
Length = 160
Score = 89.7 bits (221), Expect = 4e-16
Identities = 43/56 (76%), Positives = 50/56 (89%)
Frame = -3
Query: 177 MIMEVTVPVGLLTVHFLENVNKFQNLFCRPVATTIFLIGTAVALWLGVGATLPLLK 10
+++ V+VP GLLTV FLENVNKFQN F RPVATT+FLIGTAVALWLG+GATLP+ K
Sbjct: 98 VLLMVSVPTGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIEK 153
>ref|YP_008757471.1| cytochrome b6-f complex subunit 4 (chloroplast) [Oryza rufipogon]
gi|353685084|gb|AER12849.1| cytochrome b6/f complex
subunit IV (chloroplast) [Oryza sativa Indica Group]
gi|353685172|gb|AER12936.1| cytochrome b6/f complex
subunit IV (chloroplast) [Oryza sativa Indica Group]
gi|552954509|gb|AGY48977.1| cytochrome b6-f complex
subunit 4 (chloroplast) [Oryza rufipogon]
Length = 174
Score = 89.7 bits (221), Expect = 4e-16
Identities = 43/56 (76%), Positives = 50/56 (89%)
Frame = -3
Query: 177 MIMEVTVPVGLLTVHFLENVNKFQNLFCRPVATTIFLIGTAVALWLGVGATLPLLK 10
+++ V+VP GLLTV FLENVNKFQN F RPVATT+FLIGTAVALWLG+GATLP+ K
Sbjct: 112 VLLMVSVPTGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIEK 167
>gb|AFA26992.1| cytochrome b6/f complex subunit IV, partial [Potarophytum riparium]
Length = 158
Score = 89.7 bits (221), Expect = 4e-16
Identities = 43/56 (76%), Positives = 51/56 (91%)
Frame = -3
Query: 177 MIMEVTVPVGLLTVHFLENVNKFQNLFCRPVATTIFLIGTAVALWLGVGATLPLLK 10
+++ V+VP+GLLTV FLENVNKFQN F RPVATT+FLIGTAVALWLG+GATLP+ K
Sbjct: 96 VLLMVSVPMGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDK 151
>gb|AFA26981.1| cytochrome b6/f complex subunit IV, partial [Joinvillea ascendens]
Length = 160
Score = 89.7 bits (221), Expect = 4e-16
Identities = 43/56 (76%), Positives = 51/56 (91%)
Frame = -3
Query: 177 MIMEVTVPVGLLTVHFLENVNKFQNLFCRPVATTIFLIGTAVALWLGVGATLPLLK 10
+++ V+VP+GLLTV FLENVNKFQN F RPVATT+FLIGTAVALWLG+GATLP+ K
Sbjct: 98 VLLMVSVPMGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDK 153
>ref|XP_003606055.1| Photosystem II CP47 chlorophyll apoprotein [Medicago truncatula]
gi|355507110|gb|AES88252.1| Photosystem II CP47
chlorophyll apoprotein [Medicago truncatula]
Length = 968
Score = 89.7 bits (221), Expect = 4e-16
Identities = 43/56 (76%), Positives = 50/56 (89%)
Frame = -3
Query: 177 MIMEVTVPVGLLTVHFLENVNKFQNLFCRPVATTIFLIGTAVALWLGVGATLPLLK 10
+++ V+VPVGLLTV FLENVNKFQN F RPVATT+FLIGT VALWLG+GATLP+ K
Sbjct: 906 VLLMVSVPVGLLTVPFLENVNKFQNPFRRPVATTVFLIGTVVALWLGIGATLPIEK 961