BLASTX nr result
ID: Rauwolfia21_contig00014654
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00014654
(1371 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY01103.1| Cleavage and polyadenylation specificity factor 7... 434 e-119
gb|EMJ26328.1| hypothetical protein PRUPE_ppa002557mg [Prunus pe... 431 e-118
ref|XP_004237193.1| PREDICTED: cleavage and polyadenylation spec... 416 e-114
emb|CBI26829.3| unnamed protein product [Vitis vinifera] 414 e-113
ref|XP_006378435.1| hypothetical protein POPTR_0010s11650g [Popu... 410 e-112
ref|XP_006378434.1| hypothetical protein POPTR_0010s11650g [Popu... 410 e-112
ref|XP_002314781.2| metallo-beta-lactamase family protein [Popul... 410 e-112
ref|XP_004298504.1| PREDICTED: cleavage and polyadenylation spec... 403 e-110
ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation spec... 400 e-109
ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation spec... 399 e-108
ref|XP_006448159.1| hypothetical protein CICLE_v10014563mg [Citr... 399 e-108
ref|XP_004166505.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and... 390 e-106
gb|AAS80153.1| ACT11D09.9 [Cucumis melo] 386 e-104
ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261... 375 e-101
ref|XP_002526000.1| cleavage and polyadenylation specificity fac... 372 e-100
ref|XP_006355061.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and... 365 2e-98
ref|XP_006395858.1| hypothetical protein EUTSA_v10005303mg [Eutr... 347 5e-93
ref|XP_006290841.1| hypothetical protein CARUB_v10016952mg [Caps... 346 2e-92
ref|NP_178282.2| cleavage and polyadenylation specificity factor... 342 2e-91
ref|XP_004498247.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and... 339 1e-90
>gb|EOY01103.1| Cleavage and polyadenylation specificity factor 73 kDa subunit-II
[Theobroma cacao]
Length = 657
Score = 434 bits (1116), Expect = e-119
Identities = 220/379 (58%), Positives = 274/379 (72%), Gaps = 2/379 (0%)
Frame = +2
Query: 2 NLYYKMLINWTSQKVKDSYATRNAFDFKHVYSFDRSLVNAPGPCVLFATPGMITGGFSLE 181
N+YYKMLINWTSQK+K++YAT NAFDFK+V +FDRSL+NAPGPCVLFATPGMI+GGFSLE
Sbjct: 274 NMYYKMLINWTSQKIKETYATHNAFDFKNVQNFDRSLINAPGPCVLFATPGMISGGFSLE 333
Query: 182 VFKQWAPYEENLITLPGYCVAGTVGHKLMSAKIPMRISVDQDTQIDVRCQIHQLSFSPHT 361
VF QWAP E NLITLPGYCVAGT+GHKLMS K P +I +D+DTQ+DVRCQIHQLSFSPHT
Sbjct: 334 VFMQWAPSEINLITLPGYCVAGTIGHKLMSGK-PTKIDLDKDTQVDVRCQIHQLSFSPHT 392
Query: 362 DAKGITDLIKFLSPKHVILVHGEKPKMESLKGKFESEFRIQCYVPANNEIVSIPSAHYVK 541
DAKGI DL+KFLSPKH ILVHGEKPKM +LK + +SE IQCY PANN+ V+IP+ HYVK
Sbjct: 393 DAKGIMDLVKFLSPKHAILVHGEKPKMATLKERIQSELGIQCYCPANNDTVTIPTTHYVK 452
Query: 542 AEASGIFLQSTCSPNFRFLRTSF--KSNSDSNVVGMIDKPFQRACDIRVAEGILTTQSGH 715
A+AS F++S +PNF+F ++S KS S SN I P + D RVAEGIL + G
Sbjct: 453 ADASDAFIKSCLNPNFKFSKSSSVDKSYSGSNDSKAI--PGLQVSDERVAEGILVVEKGK 510
Query: 716 NPKIVHQNELEIFAEEKIHEVQFALCLPVRIANVDENEKVATPPQEYVPRTSNKKFWLDQ 895
K++HQ+EL E HEVQFA C P+R +++ P + + +K +
Sbjct: 511 KAKVIHQDELLHMLGENKHEVQFAYCFPMRTERLEKTRSEDLPSADDLLCGLDKCTLISL 570
Query: 896 LFLKLSEEFPEMTILDYEEYLQMESFVVSVCFKDKCLYRRTGDSQNIPALQTMYFCCMWS 1075
L KLS E + I D E LQ+ESF +S+C KD C +R + QN + ++FCC WS
Sbjct: 571 LSTKLSNELSDGNIQDLGEQLQVESFCLSICLKDNCPHRISDSLQN--DSEVVFFCCSWS 628
Query: 1076 VADKNLAWEVTSVMKSMEL 1132
VAD+ LAW++ S+MK+ L
Sbjct: 629 VADEMLAWKIISIMKNYTL 647
>gb|EMJ26328.1| hypothetical protein PRUPE_ppa002557mg [Prunus persica]
Length = 658
Score = 431 bits (1109), Expect = e-118
Identities = 218/377 (57%), Positives = 273/377 (72%)
Frame = +2
Query: 2 NLYYKMLINWTSQKVKDSYATRNAFDFKHVYSFDRSLVNAPGPCVLFATPGMITGGFSLE 181
N+YYKMLI+WTSQKVK++Y+TRNAFDFK+ + FDRS++NAPGPCVLFATPGMI+GGFSLE
Sbjct: 278 NMYYKMLISWTSQKVKETYSTRNAFDFKNAHKFDRSMINAPGPCVLFATPGMISGGFSLE 337
Query: 182 VFKQWAPYEENLITLPGYCVAGTVGHKLMSAKIPMRISVDQDTQIDVRCQIHQLSFSPHT 361
VFK WAP E NL+TLPGYCVAGT+GHKLMS K P +I +D+DTQIDVRCQIH LSFSPHT
Sbjct: 338 VFKHWAPSEMNLVTLPGYCVAGTIGHKLMSGK-PTKIDLDKDTQIDVRCQIHHLSFSPHT 396
Query: 362 DAKGITDLIKFLSPKHVILVHGEKPKMESLKGKFESEFRIQCYVPANNEIVSIPSAHYVK 541
DAKGI DLIKFLSPK+VILVHGEKPKM +LKGK +SE IQC+ PANNE VSI S HYVK
Sbjct: 397 DAKGIMDLIKFLSPKNVILVHGEKPKMATLKGKIQSELGIQCHDPANNETVSISSTHYVK 456
Query: 542 AEASGIFLQSTCSPNFRFLRTSFKSNSDSNVVGMIDKPFQRACDIRVAEGILTTQSGHNP 721
A AS F++S +PNF+F ++S + SN P R D RVAEG+L +
Sbjct: 457 ALASDAFIRSCSNPNFKFSKSSQEDEHGSNSRNNNFTPRLRVSDERVAEGVLVMERNKKA 516
Query: 722 KIVHQNELEIFAEEKIHEVQFALCLPVRIANVDENEKVATPPQEYVPRTSNKKFWLDQLF 901
K+VHQ+EL + EK H+VQFA C P I ++ E K +T + ++ L QL
Sbjct: 517 KVVHQDELLLMLGEKKHQVQFAYCCPADIGHLGET-KSSTTNDGQLCKSETCSRLLRQLS 575
Query: 902 LKLSEEFPEMTILDYEEYLQMESFVVSVCFKDKCLYRRTGDSQNIPALQTMYFCCMWSVA 1081
KLS EF + I D+E++LQ+ESF VS+C K+ C YR D QN + + +FCC W A
Sbjct: 576 AKLSNEFSQGNIQDFEDHLQVESFHVSICLKNNCPYRLM-DVQN-KSQEAAFFCCSWGTA 633
Query: 1082 DKNLAWEVTSVMKSMEL 1132
D+ LAW++ S+ ++ +
Sbjct: 634 DEKLAWKIISICQNFNV 650
>ref|XP_004237193.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Solanum lycopersicum]
Length = 1043
Score = 416 bits (1070), Expect = e-114
Identities = 215/373 (57%), Positives = 269/373 (72%)
Frame = +2
Query: 2 NLYYKMLINWTSQKVKDSYATRNAFDFKHVYSFDRSLVNAPGPCVLFATPGMITGGFSLE 181
N+YYK+LINW SQKVK+ ATRNAFDFK+V+SF+RS++NAPGPCVLFATPGM++GGFSLE
Sbjct: 275 NMYYKVLINWASQKVKNLSATRNAFDFKNVHSFERSMINAPGPCVLFATPGMLSGGFSLE 334
Query: 182 VFKQWAPYEENLITLPGYCVAGTVGHKLMSAKIPMRISVDQDTQIDVRCQIHQLSFSPHT 361
VFKQWAP E+NLI LPGYC+A TVGHKLM AK P RI VD+ TQIDVRCQIHQLSFSPHT
Sbjct: 335 VFKQWAPCEQNLIVLPGYCLAETVGHKLMRAKPPARIDVDKSTQIDVRCQIHQLSFSPHT 394
Query: 362 DAKGITDLIKFLSPKHVILVHGEKPKMESLKGKFESEFRIQCYVPANNEIVSIPSAHYVK 541
D+KGI DLI+FLSPK+VILVHGEKPKM SLK + ES+ RI CY PANNE I + HY+K
Sbjct: 395 DSKGIMDLIRFLSPKNVILVHGEKPKMASLKERIESDLRIPCYYPANNESQRIETTHYIK 454
Query: 542 AEASGIFLQSTCSPNFRFLRTSFKSNSDSNVVGMIDKPFQRACDIRVAEGILTTQSGHNP 721
AEAS FLQS+ SPNF+FL+T ++++ V+ + + CD RVAEG + Q +P
Sbjct: 455 AEASKSFLQSSLSPNFKFLKTISRADT-GFVLNERAESCVQVCDDRVAEGAVIMQKDQHP 513
Query: 722 KIVHQNELEIFAEEKIHEVQFALCLPVRIANVDENEKVATPPQEYVPRTSNKKFWLDQLF 901
KIVHQNEL E + H+VQ A C PV + DE + VA P E + +K L L+
Sbjct: 514 KIVHQNELMDILEAENHKVQVAYCCPVCVP--DEPKNVALSPGEDMHPVLDKCSLLHLLY 571
Query: 902 LKLSEEFPEMTILDYEEYLQMESFVVSVCFKDKCLYRRTGDSQNIPALQTMYFCCMWSVA 1081
KLS F ++TIL+ + LQ++SF VS C K+KC +R + + + + FCC WS+
Sbjct: 572 TKLSNGFQDVTILNDGDRLQIQSFTVSPCLKEKCPHRIHVNPDS--TSEAVNFCCTWSME 629
Query: 1082 DKNLAWEVTSVMK 1120
D+ LAW + K
Sbjct: 630 DEKLAWRYKAATK 642
>emb|CBI26829.3| unnamed protein product [Vitis vinifera]
Length = 686
Score = 414 bits (1065), Expect = e-113
Identities = 214/379 (56%), Positives = 269/379 (70%), Gaps = 2/379 (0%)
Frame = +2
Query: 2 NLYYKMLINWTSQKVKDSYATRNAFDFKHVYSFDRSLVNAPGPCVLFATPGMITGGFSLE 181
N+YYKMLI+WT+Q+VK++YAT NAFDFK+V SFDRSL+NAPGPCVLFATPGMI+GGFSLE
Sbjct: 330 NMYYKMLISWTNQRVKETYATHNAFDFKNVRSFDRSLINAPGPCVLFATPGMISGGFSLE 389
Query: 182 VFKQWAPYEENLITLPGYCVAGTVGHKLMSAKIPMRISVDQDTQIDVRCQIHQLSFSPHT 361
VFK WAP E NL+TLPGYC+AGT+GHKL + K P +I +D+D QI VRCQIHQLSFSPHT
Sbjct: 390 VFKLWAPSEMNLVTLPGYCLAGTIGHKLTTGK-PTKIDLDKDIQISVRCQIHQLSFSPHT 448
Query: 362 DAKGITDLIKFLSPKHVILVHGEKPKMESLKGKFESEFRIQCYVPANNEIVSIPSAHYVK 541
DAKGI DL+KFLSPKHVILVHGEKPKM SLKGK ES+ IQCY PANN+ V IPS ++K
Sbjct: 449 DAKGIMDLVKFLSPKHVILVHGEKPKMASLKGKIESDLGIQCYYPANNDTVCIPSTCWLK 508
Query: 542 AEASGIFLQSTCSPNFRFLRTSFKSNSDSNVVGMIDKPFQ--RACDIRVAEGILTTQSGH 715
A+ S F++S+ +PNF+F++T S SN+V + + D RVAEGIL +
Sbjct: 509 ADTSKTFIRSSLNPNFKFVKTI--SEDKSNLVSKETEATSVLQVHDERVAEGILIVEKSK 566
Query: 716 NPKIVHQNELEIFAEEKIHEVQFALCLPVRIANVDENEKVATPPQEYVPRTSNKKFWLDQ 895
K+VHQNEL + + H+VQFA C P V TS++ WL
Sbjct: 567 KAKVVHQNELLLMIGKDKHDVQFAYCCP------------------NVVSTSDECSWLHL 608
Query: 896 LFLKLSEEFPEMTILDYEEYLQMESFVVSVCFKDKCLYRRTGDSQNIPALQTMYFCCMWS 1075
LF KL+ + I D+ ++LQ++S +SVC KD C YR T Q PA ++FCC WS
Sbjct: 609 LFAKLATKLGG-NIQDFGQHLQVDSIHISVCLKDICPYRTTDGPQKEPA---VFFCCTWS 664
Query: 1076 VADKNLAWEVTSVMKSMEL 1132
VAD NLAWE+ S+M++++L
Sbjct: 665 VADVNLAWEIISIMENLDL 683
>ref|XP_006378435.1| hypothetical protein POPTR_0010s11650g [Populus trichocarpa]
gi|550329588|gb|ERP56232.1| hypothetical protein
POPTR_0010s11650g [Populus trichocarpa]
Length = 368
Score = 410 bits (1054), Expect = e-112
Identities = 213/355 (60%), Positives = 261/355 (73%)
Frame = +2
Query: 2 NLYYKMLINWTSQKVKDSYATRNAFDFKHVYSFDRSLVNAPGPCVLFATPGMITGGFSLE 181
NLYYK+LI+WTSQKVK++YATRNAFDFKHV++FDRSL+NAPGPCVLFATPGMI+GGFSLE
Sbjct: 18 NLYYKILISWTSQKVKETYATRNAFDFKHVHNFDRSLINAPGPCVLFATPGMISGGFSLE 77
Query: 182 VFKQWAPYEENLITLPGYCVAGTVGHKLMSAKIPMRISVDQDTQIDVRCQIHQLSFSPHT 361
VFKQWAP E NLITLPGYCVAGTVGHKLMS K P +I++D+DTQIDVRCQIHQLSFSPHT
Sbjct: 78 VFKQWAPCEMNLITLPGYCVAGTVGHKLMSGK-PTKINLDKDTQIDVRCQIHQLSFSPHT 136
Query: 362 DAKGITDLIKFLSPKHVILVHGEKPKMESLKGKFESEFRIQCYVPANNEIVSIPSAHYVK 541
D+KGI DL KFLSP++VILVHGEKPKM SLK + ++E RI CY+PAN + V IPS YVK
Sbjct: 137 DSKGIMDLTKFLSPRNVILVHGEKPKMVSLKERIQTELRIPCYLPANCDAVHIPSTIYVK 196
Query: 542 AEASGIFLQSTCSPNFRFLRTSFKSNSDSNVVGMIDKPFQRACDIRVAEGILTTQSGHNP 721
A AS F++S +PNFRFL+ S + NSD + + D RVAEGIL + G
Sbjct: 197 AHASNTFIRSCLNPNFRFLKRSKEDNSDQVLRNTNPTAPLQVNDERVAEGILIMEKGKKA 256
Query: 722 KIVHQNELEIFAEEKIHEVQFALCLPVRIANVDENEKVATPPQEYVPRTSNKKFWLDQLF 901
++VHQ++L + +K H+VQFA C ++ N++E T ++ S+K L LF
Sbjct: 257 RVVHQDDLLLMLRQKKHDVQFAYCCAAQLDNLEE-----TRNRDDALGLSDKCSSLQLLF 311
Query: 902 LKLSEEFPEMTILDYEEYLQMESFVVSVCFKDKCLYRRTGDSQNIPALQTMYFCC 1066
+LS F + I D E+LQ+ESF VSVC KD C YR +SQ T+YFCC
Sbjct: 312 KELSNYFSGVNIEDLGEHLQVESFHVSVCLKDNCPYRIIDNSQK--EAVTVYFCC 364
>ref|XP_006378434.1| hypothetical protein POPTR_0010s11650g [Populus trichocarpa]
gi|550329587|gb|ERP56231.1| hypothetical protein
POPTR_0010s11650g [Populus trichocarpa]
Length = 464
Score = 410 bits (1054), Expect = e-112
Identities = 213/355 (60%), Positives = 261/355 (73%)
Frame = +2
Query: 2 NLYYKMLINWTSQKVKDSYATRNAFDFKHVYSFDRSLVNAPGPCVLFATPGMITGGFSLE 181
NLYYK+LI+WTSQKVK++YATRNAFDFKHV++FDRSL+NAPGPCVLFATPGMI+GGFSLE
Sbjct: 114 NLYYKILISWTSQKVKETYATRNAFDFKHVHNFDRSLINAPGPCVLFATPGMISGGFSLE 173
Query: 182 VFKQWAPYEENLITLPGYCVAGTVGHKLMSAKIPMRISVDQDTQIDVRCQIHQLSFSPHT 361
VFKQWAP E NLITLPGYCVAGTVGHKLMS K P +I++D+DTQIDVRCQIHQLSFSPHT
Sbjct: 174 VFKQWAPCEMNLITLPGYCVAGTVGHKLMSGK-PTKINLDKDTQIDVRCQIHQLSFSPHT 232
Query: 362 DAKGITDLIKFLSPKHVILVHGEKPKMESLKGKFESEFRIQCYVPANNEIVSIPSAHYVK 541
D+KGI DL KFLSP++VILVHGEKPKM SLK + ++E RI CY+PAN + V IPS YVK
Sbjct: 233 DSKGIMDLTKFLSPRNVILVHGEKPKMVSLKERIQTELRIPCYLPANCDAVHIPSTIYVK 292
Query: 542 AEASGIFLQSTCSPNFRFLRTSFKSNSDSNVVGMIDKPFQRACDIRVAEGILTTQSGHNP 721
A AS F++S +PNFRFL+ S + NSD + + D RVAEGIL + G
Sbjct: 293 AHASNTFIRSCLNPNFRFLKRSKEDNSDQVLRNTNPTAPLQVNDERVAEGILIMEKGKKA 352
Query: 722 KIVHQNELEIFAEEKIHEVQFALCLPVRIANVDENEKVATPPQEYVPRTSNKKFWLDQLF 901
++VHQ++L + +K H+VQFA C ++ N++E T ++ S+K L LF
Sbjct: 353 RVVHQDDLLLMLRQKKHDVQFAYCCAAQLDNLEE-----TRNRDDALGLSDKCSSLQLLF 407
Query: 902 LKLSEEFPEMTILDYEEYLQMESFVVSVCFKDKCLYRRTGDSQNIPALQTMYFCC 1066
+LS F + I D E+LQ+ESF VSVC KD C YR +SQ T+YFCC
Sbjct: 408 KELSNYFSGVNIEDLGEHLQVESFHVSVCLKDNCPYRIIDNSQK--EAVTVYFCC 460
>ref|XP_002314781.2| metallo-beta-lactamase family protein [Populus trichocarpa]
gi|550329586|gb|EEF00952.2| metallo-beta-lactamase family
protein [Populus trichocarpa]
Length = 625
Score = 410 bits (1054), Expect = e-112
Identities = 213/355 (60%), Positives = 261/355 (73%)
Frame = +2
Query: 2 NLYYKMLINWTSQKVKDSYATRNAFDFKHVYSFDRSLVNAPGPCVLFATPGMITGGFSLE 181
NLYYK+LI+WTSQKVK++YATRNAFDFKHV++FDRSL+NAPGPCVLFATPGMI+GGFSLE
Sbjct: 275 NLYYKILISWTSQKVKETYATRNAFDFKHVHNFDRSLINAPGPCVLFATPGMISGGFSLE 334
Query: 182 VFKQWAPYEENLITLPGYCVAGTVGHKLMSAKIPMRISVDQDTQIDVRCQIHQLSFSPHT 361
VFKQWAP E NLITLPGYCVAGTVGHKLMS K P +I++D+DTQIDVRCQIHQLSFSPHT
Sbjct: 335 VFKQWAPCEMNLITLPGYCVAGTVGHKLMSGK-PTKINLDKDTQIDVRCQIHQLSFSPHT 393
Query: 362 DAKGITDLIKFLSPKHVILVHGEKPKMESLKGKFESEFRIQCYVPANNEIVSIPSAHYVK 541
D+KGI DL KFLSP++VILVHGEKPKM SLK + ++E RI CY+PAN + V IPS YVK
Sbjct: 394 DSKGIMDLTKFLSPRNVILVHGEKPKMVSLKERIQTELRIPCYLPANCDAVHIPSTIYVK 453
Query: 542 AEASGIFLQSTCSPNFRFLRTSFKSNSDSNVVGMIDKPFQRACDIRVAEGILTTQSGHNP 721
A AS F++S +PNFRFL+ S + NSD + + D RVAEGIL + G
Sbjct: 454 AHASNTFIRSCLNPNFRFLKRSKEDNSDQVLRNTNPTAPLQVNDERVAEGILIMEKGKKA 513
Query: 722 KIVHQNELEIFAEEKIHEVQFALCLPVRIANVDENEKVATPPQEYVPRTSNKKFWLDQLF 901
++VHQ++L + +K H+VQFA C ++ N++E T ++ S+K L LF
Sbjct: 514 RVVHQDDLLLMLRQKKHDVQFAYCCAAQLDNLEE-----TRNRDDALGLSDKCSSLQLLF 568
Query: 902 LKLSEEFPEMTILDYEEYLQMESFVVSVCFKDKCLYRRTGDSQNIPALQTMYFCC 1066
+LS F + I D E+LQ+ESF VSVC KD C YR +SQ T+YFCC
Sbjct: 569 KELSNYFSGVNIEDLGEHLQVESFHVSVCLKDNCPYRIIDNSQK--EAVTVYFCC 621
>ref|XP_004298504.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Fragaria vesca subsp. vesca]
Length = 1009
Score = 403 bits (1036), Expect = e-110
Identities = 203/378 (53%), Positives = 260/378 (68%)
Frame = +2
Query: 2 NLYYKMLINWTSQKVKDSYATRNAFDFKHVYSFDRSLVNAPGPCVLFATPGMITGGFSLE 181
N+YY MLI+WTSQK+K++++T NAFDFK+V+ F+RS+++APGPCVLFA PGMI+GGFSLE
Sbjct: 270 NMYYMMLISWTSQKIKETHSTHNAFDFKNVHKFERSMIDAPGPCVLFAGPGMISGGFSLE 329
Query: 182 VFKQWAPYEENLITLPGYCVAGTVGHKLMSAKIPMRISVDQDTQIDVRCQIHQLSFSPHT 361
VFK WAP E+NL+ +PGYCVAGT+GHKLMS K P +I +D+DT+IDVRCQIHQL+FSPHT
Sbjct: 330 VFKHWAPSEKNLVIMPGYCVAGTIGHKLMSGK-PTKIDLDKDTRIDVRCQIHQLAFSPHT 388
Query: 362 DAKGITDLIKFLSPKHVILVHGEKPKMESLKGKFESEFRIQCYVPANNEIVSIPSAHYVK 541
DAKGI DL+KFLSPKHVILVHGEKPKM +LKG+ E+E IQCY PA NE VSIPS HY
Sbjct: 389 DAKGIMDLVKFLSPKHVILVHGEKPKMATLKGRIETELGIQCYYPAINETVSIPSTHYAT 448
Query: 542 AEASGIFLQSTCSPNFRFLRTSFKSNSDSNVVGMIDKPFQRACDIRVAEGILTTQSGHNP 721
A S F+QS SPNF+F +S + + S+ I P R D RVAEGIL +
Sbjct: 449 AVTSDAFVQSCSSPNFKFSTSSSEHSQGSSNSKSI--PRLRVSDDRVAEGILVMEKNKKA 506
Query: 722 KIVHQNELEIFAEEKIHEVQFALCLPVRIANVDENEKVATPPQEYVPRTSNKKFWLDQLF 901
K+VHQ+EL + EK H+V+FA C P I N EN +P +S L
Sbjct: 507 KVVHQDELPLMLGEKKHQVKFAYCCPAHIGNSQENTS--------LPLSSTNNDLLQLFS 558
Query: 902 LKLSEEFPEMTILDYEEYLQMESFVVSVCFKDKCLYRRTGDSQNIPALQTMYFCCMWSVA 1081
KL+ E E I + ++LQ+ES VS+C + C Y R D+ + ++FCC W +
Sbjct: 559 AKLANELSEGNIQHFGDHLQLESIHVSICSNNDCPY-RLSDNGAEEQREPVFFCCSWEME 617
Query: 1082 DKNLAWEVTSVMKSMELR 1135
D+ LAW+V S+ + LR
Sbjct: 618 DEKLAWKVISICQKPTLR 635
>ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Citrus sinensis]
Length = 1019
Score = 400 bits (1028), Expect = e-109
Identities = 212/380 (55%), Positives = 265/380 (69%), Gaps = 3/380 (0%)
Frame = +2
Query: 2 NLYYKMLINWTSQKVKDSYATRNAFDFKHVYSFDRSLVNAPGPCVLFATPGMITGGFSLE 181
N+YYKMLI+WTSQKVK++Y NAFDFK+V++FDRSL++APGPCVLFATPGM+TGGFSLE
Sbjct: 275 NMYYKMLISWTSQKVKETY---NAFDFKNVHNFDRSLIDAPGPCVLFATPGMLTGGFSLE 331
Query: 182 VFKQWAPYEENLITLPGYCVAGTVGHKLMSAKIPMRISVDQDTQIDVRCQIHQLSFSPHT 361
VFK WAP E NLITLPGYC+AGT+G+KLMS + + + T+IDVRCQIHQL+FSPHT
Sbjct: 332 VFKHWAPSEMNLITLPGYCLAGTIGNKLMSGNPTIEL---EGTKIDVRCQIHQLAFSPHT 388
Query: 362 DAKGITDLIKFLSPKHVILVHGEKPKMESLKGKFESEFRIQCYVPANNEIVSIPSAHYVK 541
D KGI DL+KFLSP+HVILVHGEKPKM +LK + +SE I+CY PANNE + IPS HYVK
Sbjct: 389 DGKGIMDLVKFLSPQHVILVHGEKPKMATLKERIQSELGIKCYDPANNESMCIPSTHYVK 448
Query: 542 AEASGIFLQSTCSPNFRFLRTSFKSNSDSNVVGMIDKPFQRACDIRVAEGILTTQSGHNP 721
A AS F++S +PNF++L++ + S S D RVAEGIL +
Sbjct: 449 AGASDAFIRSCMNPNFQYLKSGSEEKSVSGSKCTEGTLPLWIKDERVAEGILVLEKSEKA 508
Query: 722 KIVHQNELEIFAEEKIHEVQFALCLPVRIANVDENEKVAT---PPQEYVPRTSNKKFWLD 892
K+VHQ+EL + EK HEVQFA C PV NVDE EK T P + R NK +
Sbjct: 509 KVVHQDELLLMLGEKRHEVQFAYCCPV---NVDELEKFTTTSLTPTARMLRDPNKSSLIR 565
Query: 893 QLFLKLSEEFPEMTILDYEEYLQMESFVVSVCFKDKCLYRRTGDSQNIPALQTMYFCCMW 1072
L KLS + E I D+ E+LQ+ESF +SVC KD C YR T ++ P +T +FCC W
Sbjct: 566 LLVAKLSRKLSEGNIQDFGEHLQVESFHLSVCLKDTCPYRITNGLEDKP--RTAFFCCTW 623
Query: 1073 SVADKNLAWEVTSVMKSMEL 1132
S AD LA ++ S M++ +L
Sbjct: 624 SAADDKLARKIISAMENRDL 643
>ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Cucumis sativus]
Length = 649
Score = 399 bits (1026), Expect = e-108
Identities = 209/389 (53%), Positives = 268/389 (68%), Gaps = 10/389 (2%)
Frame = +2
Query: 2 NLYYKMLINWTSQKVKDSYATRNAFDFKHVYSFDRSLVNAPGPCVLFATPGMITGGFSLE 181
N+YYKMLI+WTSQKVK++Y TRNAFDFK+V FDRS+++APGPCVLFATPGMI+ GFSLE
Sbjct: 275 NMYYKMLISWTSQKVKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLE 334
Query: 182 VFKQWAPYEENLITLPGYCVAGTVGHKLMSAKIPMRISVDQDTQIDVRCQIHQLSFSPHT 361
VFK+WAP + NLITLPGYCVAGTVGHKLMS K P +I +D+ TQIDV+CQ+HQL+FSPHT
Sbjct: 335 VFKRWAPSKLNLITLPGYCVAGTVGHKLMSGK-PTKIDLDKVTQIDVQCQVHQLAFSPHT 393
Query: 362 DAKGITDLIKFLSPKHVILVHGEKPKMESLKGKFESEFRIQCYVPANNEIVSIPSAHYVK 541
D+KGI DL+KFLSPKHVILVHGEKPKM LK + SE I C+ PANNE VSI S VK
Sbjct: 394 DSKGIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSVK 453
Query: 542 AEASGIFLQSTCSPNFRFLR----------TSFKSNSDSNVVGMIDKPFQRACDIRVAEG 691
AEAS +F+QS +PNF+FL+ S+K+ SN++ P Q D RV EG
Sbjct: 454 AEASSMFIQSCSTPNFKFLKRNLIDPDLKDLSYKAERTSNML----IPLQ-VSDDRVNEG 508
Query: 692 ILTTQSGHNPKIVHQNELEIFAEEKIHEVQFALCLPVRIANVDENEKVATPPQEYVPRTS 871
IL ++G K +HQ+EL + ++ HEV+FA C P+ ++DE + S
Sbjct: 509 ILVMENGKKTKALHQDELLLLLGQQEHEVRFAHCRPIYFGSLDE--------IHVMDSLS 560
Query: 872 NKKFWLDQLFLKLSEEFPEMTILDYEEYLQMESFVVSVCFKDKCLYRRTGDSQNIPALQT 1051
K WL QL KLS E + + + EYLQ+ES +S+C K+ C Y RT D +
Sbjct: 561 RKSLWLSQLSFKLSTELSDRNVQNLGEYLQVESITLSICSKENCPY-RTIDRIKNESTAM 619
Query: 1052 MYFCCMWSVADKNLAWEVTSVMKSMELRS 1138
++ CC W VAD+ LAW++ S+++ +L S
Sbjct: 620 VFCCCSWLVADEILAWKIISILEKHDLGS 648
>ref|XP_006448159.1| hypothetical protein CICLE_v10014563mg [Citrus clementina]
gi|557550770|gb|ESR61399.1| hypothetical protein
CICLE_v10014563mg [Citrus clementina]
Length = 646
Score = 399 bits (1024), Expect = e-108
Identities = 212/380 (55%), Positives = 264/380 (69%), Gaps = 3/380 (0%)
Frame = +2
Query: 2 NLYYKMLINWTSQKVKDSYATRNAFDFKHVYSFDRSLVNAPGPCVLFATPGMITGGFSLE 181
N+YYKMLI+WTSQKVK++Y NAFDFK+V++FDRSL++APGPCVLFATPGM+TGGFSLE
Sbjct: 275 NMYYKMLISWTSQKVKETY---NAFDFKNVHNFDRSLIDAPGPCVLFATPGMLTGGFSLE 331
Query: 182 VFKQWAPYEENLITLPGYCVAGTVGHKLMSAKIPMRISVDQDTQIDVRCQIHQLSFSPHT 361
VFK WAP E NLITLPGYC+AGT+G+KLMS + + + T+IDVRCQIHQL+FSPHT
Sbjct: 332 VFKHWAPSEMNLITLPGYCLAGTIGNKLMSGNPTIEL---EGTKIDVRCQIHQLAFSPHT 388
Query: 362 DAKGITDLIKFLSPKHVILVHGEKPKMESLKGKFESEFRIQCYVPANNEIVSIPSAHYVK 541
D KGI DL+KFLSP+HVILVHGEKPKM +LK + +SE I+CY PANNE + IPS HYVK
Sbjct: 389 DGKGIMDLVKFLSPQHVILVHGEKPKMATLKERIQSELGIKCYDPANNESMCIPSTHYVK 448
Query: 542 AEASGIFLQSTCSPNFRFLRTSFKSNSDSNVVGMIDKPFQRACDIRVAEGILTTQSGHNP 721
A AS F++S +PNF+FL++ + S S D RVAEGIL +
Sbjct: 449 AGASDAFIRSCMNPNFQFLKSGSEEKSVSGSKCTEGTLPLWIKDERVAEGILVLEKSEKA 508
Query: 722 KIVHQNELEIFAEEKIHEVQFALCLPVRIANVDENEKVAT---PPQEYVPRTSNKKFWLD 892
K+VHQ+EL + EK HEVQFA C PV NVDE EK T P + R NK +
Sbjct: 509 KVVHQDELLLMLGEKRHEVQFAYCCPV---NVDELEKFTTTSLTPTARMLRDPNKSSLIR 565
Query: 893 QLFLKLSEEFPEMTILDYEEYLQMESFVVSVCFKDKCLYRRTGDSQNIPALQTMYFCCMW 1072
L KLS + E I D+ E+LQ+ESF +SVC KD C YR T ++ P +T + CC W
Sbjct: 566 LLVAKLSRKLSEGNIQDFGEHLQVESFHLSVCLKDTCPYRITNGLEDKP--RTAFVCCTW 623
Query: 1073 SVADKNLAWEVTSVMKSMEL 1132
S AD LA ++ S M++ +L
Sbjct: 624 SAADDKLARKIISAMENRDL 643
>ref|XP_004166505.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 3-II-like, partial [Cucumis
sativus]
Length = 472
Score = 390 bits (1001), Expect = e-106
Identities = 202/379 (53%), Positives = 257/379 (67%)
Frame = +2
Query: 2 NLYYKMLINWTSQKVKDSYATRNAFDFKHVYSFDRSLVNAPGPCVLFATPGMITGGFSLE 181
N+YYKMLI+WTSQKVK++Y TRNAFDFK+V FDRS+++APGPCVLFATPGMI+ GFSLE
Sbjct: 119 NMYYKMLISWTSQKVKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLE 178
Query: 182 VFKQWAPYEENLITLPGYCVAGTVGHKLMSAKIPMRISVDQDTQIDVRCQIHQLSFSPHT 361
VFK+WAP + NLITLPGYCVAGTVGHKLMS K P +I +D+ TQIDV+CQ+HQL+FSPHT
Sbjct: 179 VFKRWAPSKLNLITLPGYCVAGTVGHKLMSGK-PTKIDLDKVTQIDVQCQVHQLAFSPHT 237
Query: 362 DAKGITDLIKFLSPKHVILVHGEKPKMESLKGKFESEFRIQCYVPANNEIVSIPSAHYVK 541
D+KGI DL+KFLSPKHVILVHGEKPKM LK + SE I C+ PANNE VSI S VK
Sbjct: 238 DSKGIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSVK 297
Query: 542 AEASGIFLQSTCSPNFRFLRTSFKSNSDSNVVGMIDKPFQRACDIRVAEGILTTQSGHNP 721
AEAS +F+QS +PNF + P + D RV EGIL ++G
Sbjct: 298 AEASSMFIQSCSTPNF----------------NLSCGPALQVSDDRVNEGILVMENGKKX 341
Query: 722 KIVHQNELEIFAEEKIHEVQFALCLPVRIANVDENEKVATPPQEYVPRTSNKKFWLDQLF 901
K +HQ+EL + ++ HEV+FA C P+ ++DE + S K WL QL
Sbjct: 342 KALHQDELLLLLGQQEHEVRFAHCRPIYFGSLDE--------IHVMDSLSRKSLWLSQLS 393
Query: 902 LKLSEEFPEMTILDYEEYLQMESFVVSVCFKDKCLYRRTGDSQNIPALQTMYFCCMWSVA 1081
KLS E + + + EYLQ+ES +S+C K+ C Y RT D + ++ CC W VA
Sbjct: 394 FKLSTELSDRNVQNLGEYLQVESITLSICSKENCPY-RTIDRIKNESTAMVFCCCSWLVA 452
Query: 1082 DKNLAWEVTSVMKSMELRS 1138
D+ LAW++ S+++ +L S
Sbjct: 453 DEILAWKIISILEKHDLGS 471
>gb|AAS80153.1| ACT11D09.9 [Cucumis melo]
Length = 708
Score = 386 bits (991), Expect = e-104
Identities = 207/414 (50%), Positives = 268/414 (64%), Gaps = 35/414 (8%)
Frame = +2
Query: 2 NLYYKMLINWTSQKVKDSYATRNAFDFKHVYSFDRSLVNAPGPCVLFATPGMITGGFSLE 181
N+YYKMLI+WTSQKVK++Y TRNAFDFK+V FDRS+++APGPCVLFATPGMI+ GFSLE
Sbjct: 308 NMYYKMLISWTSQKVKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLE 367
Query: 182 VFKQWAPYEENLITLPGYCVAGTVGHKLMSAKIPMRISVDQDTQIDVRCQIHQLSFSPHT 361
VFK+WAP + NLITLPGYCVAGTVGHKLMS K P +I +D+DTQIDV HQL+FSPHT
Sbjct: 368 VFKRWAPSKLNLITLPGYCVAGTVGHKLMSGK-PTKIDLDKDTQIDV----HQLAFSPHT 422
Query: 362 DAKGITDLIKFLSPKHVILVHGEKPKMESLKGKFESEFRIQCYVPANNEIVSIPSAHYVK 541
D+KGI DL+KFLSPKHVILVHGEKPKM LK + SE I C+ PANNE VSI S +K
Sbjct: 423 DSKGIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSIK 482
Query: 542 AEASGIFLQSTCSPNFRFLRT-------------SFKSNSDSNVV--------------- 637
AEAS +F+QS +PNF+FL+ S+K+ SN++
Sbjct: 483 AEASSMFIQSCSTPNFKFLKRNLIDKIDPDLKDLSYKAVRTSNMLIRECSNPHFKHLNRN 542
Query: 638 -------GMIDKPFQRACDIRVAEGILTTQSGHNPKIVHQNELEIFAEEKIHEVQFALCL 796
+ P + D RV EGIL ++G K +HQ+EL + E+ HEV+FA C
Sbjct: 543 LDAKFDSSLSGGPELQVSDDRVNEGILVMENGKKTKALHQDELLLLLGEQEHEVRFAHCR 602
Query: 797 PVRIANVDENEKVATPPQEYVPRTSNKKFWLDQLFLKLSEEFPEMTILDYEEYLQMESFV 976
P+ ++DE + + S K WL QL KLS E + + + EYLQ+ES
Sbjct: 603 PIYFGSLDEIHVMDS--------LSRKSLWLSQLSFKLSTELSDRNVQNLGEYLQVESIT 654
Query: 977 VSVCFKDKCLYRRTGDSQNIPALQTMYFCCMWSVADKNLAWEVTSVMKSMELRS 1138
+S+C K+ C YR T +N + ++ CC W VAD+ LAW++ S+++ +L S
Sbjct: 655 LSICSKENCPYRTTNRIEN-ESTAMVFCCCSWLVADEILAWKIISILEKHDLGS 707
>ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
Length = 2299
Score = 375 bits (964), Expect = e-101
Identities = 191/337 (56%), Positives = 247/337 (73%), Gaps = 2/337 (0%)
Frame = +2
Query: 2 NLYYKMLINWTSQKVKDSYATRNAFDFKHVYSFDRSLVNAPGPCVLFATPGMITGGFSLE 181
N+YYKMLI+WT+Q+VK++YAT NAFDFK+V SFDRSL+NAPGPCVLFATPGMI+GGFSLE
Sbjct: 1524 NMYYKMLISWTNQRVKETYATHNAFDFKNVRSFDRSLINAPGPCVLFATPGMISGGFSLE 1583
Query: 182 VFKQWAPYEENLITLPGYCVAGTVGHKLMSAKIPMRISVDQDTQIDVRCQIHQLSFSPHT 361
VFK WAP E NL+TLPGYC+AGT+GHKL + K P +I +D+D QI VRCQIHQLSFSPHT
Sbjct: 1584 VFKLWAPSEMNLVTLPGYCLAGTIGHKLTTGK-PTKIDLDKDIQISVRCQIHQLSFSPHT 1642
Query: 362 DAKGITDLIKFLSPKHVILVHGEKPKMESLKGKFESEFRIQCYVPANNEIVSIPSAHYVK 541
DAKGI DL+KFLSPKHVILVHGEKPKM SLKGK ES+ IQCY PANN+ V IPS ++K
Sbjct: 1643 DAKGIMDLVKFLSPKHVILVHGEKPKMASLKGKIESDLGIQCYYPANNDTVCIPSTCWLK 1702
Query: 542 AEASGIFLQSTCSPNFRFLRTSFKSNSDSNVVGMIDKPFQ--RACDIRVAEGILTTQSGH 715
A+ S F++S+ +PNF+F++T S SN+V + + D RVAEGIL +
Sbjct: 1703 ADTSKTFIRSSLNPNFKFVKTI--SEDKSNLVSKETEATSVLQVHDERVAEGILIVEKSK 1760
Query: 716 NPKIVHQNELEIFAEEKIHEVQFALCLPVRIANVDENEKVATPPQEYVPRTSNKKFWLDQ 895
K+VHQNEL + + H+VQFA C PV+I N++ + + + V TS++ WL
Sbjct: 1761 KAKVVHQNELLLMIGKDKHDVQFAYCCPVQIGNLERTKGMDFALSKNVVSTSDECSWLHL 1820
Query: 896 LFLKLSEEFPEMTILDYEEYLQMESFVVSVCFKDKCL 1006
LF KL+ + I D+ ++LQ++S +S F ++ +
Sbjct: 1821 LFAKLATKLGG-NIQDFGQHLQVDSIHISSIFGERSI 1856
>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis] gi|223534732|gb|EEF36424.1| cleavage and
polyadenylation specificity factor, putative [Ricinus
communis]
Length = 963
Score = 372 bits (956), Expect = e-100
Identities = 181/277 (65%), Positives = 217/277 (78%)
Frame = +2
Query: 2 NLYYKMLINWTSQKVKDSYATRNAFDFKHVYSFDRSLVNAPGPCVLFATPGMITGGFSLE 181
N+YYKMLI WTSQK+K++Y +RNAFDFK+VY+FDRSL++APGPCVLFATPGMI+GGFSLE
Sbjct: 275 NMYYKMLIGWTSQKIKETYTSRNAFDFKNVYTFDRSLLDAPGPCVLFATPGMISGGFSLE 334
Query: 182 VFKQWAPYEENLITLPGYCVAGTVGHKLMSAKIPMRISVDQDTQIDVRCQIHQLSFSPHT 361
VFK+WAP E NL+TLPGYCVAGT+GHKLMS K P +I++D+DTQIDVRCQIHQLSFSPHT
Sbjct: 335 VFKRWAPCEMNLVTLPGYCVAGTIGHKLMSGK-PSKINLDKDTQIDVRCQIHQLSFSPHT 393
Query: 362 DAKGITDLIKFLSPKHVILVHGEKPKMESLKGKFESEFRIQCYVPANNEIVSIPSAHYVK 541
DAKGI DL+KFLSPKHVILVHGEKPKM SLK + +SE IQCYVPAN E + IPS +VK
Sbjct: 394 DAKGIMDLVKFLSPKHVILVHGEKPKMASLKERIQSELEIQCYVPANCETLCIPSTLFVK 453
Query: 542 AEASGIFLQSTCSPNFRFLRTSFKSNSDSNVVGMIDKPFQRACDIRVAEGILTTQSGHNP 721
A+AS F++S SPNFRFL S K SD + D RVAEGIL +
Sbjct: 454 ADASEAFIRSCLSPNFRFLNKSLKDTSDLVLHSTNATSRLEVSDERVAEGILVVEKNKKA 513
Query: 722 KIVHQNELEIFAEEKIHEVQFALCLPVRIANVDENEK 832
++VHQ+EL + K HEVQFA C PV++ N+D+ +
Sbjct: 514 RVVHQDELLLMLGAKQHEVQFAYCCPVQVDNMDQTRR 550
>ref|XP_006355061.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 3-II-like [Solanum tuberosum]
Length = 948
Score = 365 bits (937), Expect = 2e-98
Identities = 181/275 (65%), Positives = 215/275 (78%)
Frame = +2
Query: 2 NLYYKMLINWTSQKVKDSYATRNAFDFKHVYSFDRSLVNAPGPCVLFATPGMITGGFSLE 181
N+YYK+LINW SQKVK+ ATRNAFDFK+V+SF+RS++NAPGPCVLFATPGM++GGFSLE
Sbjct: 275 NMYYKVLINWASQKVKNLSATRNAFDFKNVHSFERSMINAPGPCVLFATPGMLSGGFSLE 334
Query: 182 VFKQWAPYEENLITLPGYCVAGTVGHKLMSAKIPMRISVDQDTQIDVRCQIHQLSFSPHT 361
VFKQWAPYE+NLI LPGYC+A TVGHKLM AK P RI VD+ TQIDVRCQIHQLSFSPHT
Sbjct: 335 VFKQWAPYEQNLIALPGYCLAETVGHKLMRAKPPARIDVDKSTQIDVRCQIHQLSFSPHT 394
Query: 362 DAKGITDLIKFLSPKHVILVHGEKPKMESLKGKFESEFRIQCYVPANNEIVSIPSAHYVK 541
D+KGI DLI+FLSPK+VILVHGEKPKM SLK + ES+ RI CY PANNE I S Y+K
Sbjct: 395 DSKGIMDLIRFLSPKNVILVHGEKPKMASLKERIESDLRIPCYYPANNESQCIESTQYIK 454
Query: 542 AEASGIFLQSTCSPNFRFLRTSFKSNSDSNVVGMIDKPFQRACDIRVAEGILTTQSGHNP 721
AEAS FLQS+ SPNF+FL+T ++++ + + Q CD RVAEG + Q +P
Sbjct: 455 AEASKSFLQSSLSPNFKFLKTISRADTGFILNERAESCIQ-VCDDRVAEGAVIMQKDQHP 513
Query: 722 KIVHQNELEIFAEEKIHEVQFALCLPVRIANVDEN 826
KIVHQNEL E + H+VQ A C PV + N +N
Sbjct: 514 KIVHQNELMDILEAENHKVQVAYCCPVCVPNEPKN 548
>ref|XP_006395858.1| hypothetical protein EUTSA_v10005303mg [Eutrema salsugineum]
gi|557092497|gb|ESQ33144.1| hypothetical protein
EUTSA_v10005303mg [Eutrema salsugineum]
Length = 617
Score = 347 bits (891), Expect = 5e-93
Identities = 185/373 (49%), Positives = 236/373 (63%)
Frame = +2
Query: 2 NLYYKMLINWTSQKVKDSYATRNAFDFKHVYSFDRSLVNAPGPCVLFATPGMITGGFSLE 181
N+YYKMLI+WTSQ VK+ +AT N FDFK+V FDRSL++APGPCVLFATPGM+ GFSLE
Sbjct: 275 NMYYKMLISWTSQNVKEKHATHNPFDFKNVKDFDRSLIHAPGPCVLFATPGMLCAGFSLE 334
Query: 182 VFKQWAPYEENLITLPGYCVAGTVGHKLMSAKIPMRISVDQDTQIDVRCQIHQLSFSPHT 361
VFK WAP NL+ LPGY VAGTVGHKLMS K P + + T++DVRC+IHQ++FSPHT
Sbjct: 335 VFKHWAPSPLNLVALPGYSVAGTVGHKLMSGK-PTTVDLYNGTKVDVRCKIHQVAFSPHT 393
Query: 362 DAKGITDLIKFLSPKHVILVHGEKPKMESLKGKFESEFRIQCYVPANNEIVSIPSAHYVK 541
DAKGI DL KFLSPK+V+LVHGEKP M SLK K SE + C+VPAN E VS+ S ++K
Sbjct: 394 DAKGIMDLTKFLSPKNVVLVHGEKPSMMSLKDKITSELDVPCFVPANGETVSVSSTTFIK 453
Query: 542 AEASGIFLQSTCSPNFRFLRTSFKSNSDSNVVGMIDKPFQRACDIRVAEGILTTQSGHNP 721
A AS +FL+S SPNFRF SNS + + R D R A+G+L +
Sbjct: 454 ANASDMFLKSCSSPNFRF------SNSSTEL---------RVTDQRTADGVLVIEKSKKA 498
Query: 722 KIVHQNELEIFAEEKIHEVQFALCLPVRIANVDENEKVATPPQEYVPRTSNKKFWLDQLF 901
KIVH +E+ EK H V A C PV++ ++ V + QL
Sbjct: 499 KIVHLDEVSEVLHEKNHVVSLACCCPVKVKKESDDVDV--------------DLIIKQLS 544
Query: 902 LKLSEEFPEMTILDYEEYLQMESFVVSVCFKDKCLYRRTGDSQNIPALQTMYFCCMWSVA 1081
K+SE+ I + LQ+ SF S+C K+KC +RR S + A ++ CC WSV+
Sbjct: 545 EKISEKVSGAEIHETGNCLQVGSFKGSLCLKEKCAHRREISSSSSEA---VFLCCNWSVS 601
Query: 1082 DKNLAWEVTSVMK 1120
D L WE+ +V+K
Sbjct: 602 DLELGWEIINVIK 614
>ref|XP_006290841.1| hypothetical protein CARUB_v10016952mg [Capsella rubella]
gi|482559548|gb|EOA23739.1| hypothetical protein
CARUB_v10016952mg [Capsella rubella]
Length = 555
Score = 346 bits (887), Expect = 2e-92
Identities = 185/373 (49%), Positives = 235/373 (63%)
Frame = +2
Query: 2 NLYYKMLINWTSQKVKDSYATRNAFDFKHVYSFDRSLVNAPGPCVLFATPGMITGGFSLE 181
N+YYKMLI+WTSQ VK+ + T N FDFK+V FDRSL++APGPCVLFATPGM+ GFSLE
Sbjct: 217 NMYYKMLISWTSQNVKEKHNTHNPFDFKNVKDFDRSLIHAPGPCVLFATPGMLCAGFSLE 276
Query: 182 VFKQWAPYEENLITLPGYCVAGTVGHKLMSAKIPMRISVDQDTQIDVRCQIHQLSFSPHT 361
VFK WAP NL+ LPGY VAGTVGHKLM+ K P + + T++DVRC+IHQ++FSPHT
Sbjct: 277 VFKHWAPSPLNLVALPGYSVAGTVGHKLMAGK-PTTVDLYNGTKVDVRCKIHQVAFSPHT 335
Query: 362 DAKGITDLIKFLSPKHVILVHGEKPKMESLKGKFESEFRIQCYVPANNEIVSIPSAHYVK 541
DAKGI DL KFLSPK+V+LVHGEKP M +LK K SE I C+VPAN E VS+ S +VK
Sbjct: 336 DAKGIMDLTKFLSPKNVVLVHGEKPSMMTLKEKITSELDIPCFVPANGETVSVASTTFVK 395
Query: 542 AEASGIFLQSTCSPNFRFLRTSFKSNSDSNVVGMIDKPFQRACDIRVAEGILTTQSGHNP 721
A+AS +FL+S SPNF+F SNS R D R A+G+L +
Sbjct: 396 AKASDMFLKSCSSPNFKF------SNSSQ----------LRVTDQRTADGVLVIEKSKKA 439
Query: 722 KIVHQNELEIFAEEKIHEVQFALCLPVRIANVDENEKVATPPQEYVPRTSNKKFWLDQLF 901
KIVHQ+E+ EK H V A C PV+ +N+ + QL
Sbjct: 440 KIVHQDEVSEVLHEKNHVVCLAYCCPVKAKGESDNDVDL----------------IKQLS 483
Query: 902 LKLSEEFPEMTILDYEEYLQMESFVVSVCFKDKCLYRRTGDSQNIPALQTMYFCCMWSVA 1081
K+SE I + E LQ+ SF +VC K+KC++R ++ I + ++ CC WSVA
Sbjct: 484 TKISEIMSGAQIHEAENSLQVGSFKGAVCLKEKCMHR----TEIISCSEAVFLCCNWSVA 539
Query: 1082 DKNLAWEVTSVMK 1120
D L WE+ +VMK
Sbjct: 540 DLELGWEIINVMK 552
>ref|NP_178282.2| cleavage and polyadenylation specificity factor subunit 3-II
[Arabidopsis thaliana]
gi|332278175|sp|Q8GUU3.2|CPS3B_ARATH RecName:
Full=Cleavage and polyadenylation specificity factor
subunit 3-II; AltName: Full=Cleavage and polyadenylation
specificity factor 73 kDa subunit II; Short=AtCPSF73-II;
Short=CPSF 73 kDa subunit II; AltName: Full=Protein
EMBRYO SAC DEVELOPMENT ARREST 26
gi|62320470|dbj|BAD94982.1| putative cleavage and
polyadenylation specifity factor [Arabidopsis thaliana]
gi|330250395|gb|AEC05489.1| cleavage and polyadenylation
specificity factor subunit 3-II [Arabidopsis thaliana]
Length = 613
Score = 342 bits (878), Expect = 2e-91
Identities = 180/373 (48%), Positives = 231/373 (61%)
Frame = +2
Query: 2 NLYYKMLINWTSQKVKDSYATRNAFDFKHVYSFDRSLVNAPGPCVLFATPGMITGGFSLE 181
N+YYKMLI+WTSQ VK+ + T N FDFK+V FDRSL++APGPCVLFATPGM+ GFSLE
Sbjct: 275 NMYYKMLISWTSQNVKEKHNTHNPFDFKNVKDFDRSLIHAPGPCVLFATPGMLCAGFSLE 334
Query: 182 VFKQWAPYEENLITLPGYCVAGTVGHKLMSAKIPMRISVDQDTQIDVRCQIHQLSFSPHT 361
VFK WAP NL+ LPGY VAGTVGHKLM+ K P + + T++DVRC++HQ++FSPHT
Sbjct: 335 VFKHWAPSPLNLVALPGYSVAGTVGHKLMAGK-PTTVDLYNGTKVDVRCKVHQVAFSPHT 393
Query: 362 DAKGITDLIKFLSPKHVILVHGEKPKMESLKGKFESEFRIQCYVPANNEIVSIPSAHYVK 541
DAKGI DL KFLSPK+V+LVHGEKP M LK K SE I C+VPAN E VS S Y+K
Sbjct: 394 DAKGIMDLTKFLSPKNVVLVHGEKPSMMILKEKITSELDIPCFVPANGETVSFASTTYIK 453
Query: 542 AEASGIFLQSTCSPNFRFLRTSFKSNSDSNVVGMIDKPFQRACDIRVAEGILTTQSGHNP 721
A AS +FL+S +PNF+F SNS R D R A+G+L +
Sbjct: 454 ANASDMFLKSCSNPNFKF------SNSTQ----------LRVTDHRTADGVLVIEKSKKA 497
Query: 722 KIVHQNELEIFAEEKIHEVQFALCLPVRIANVDENEKVATPPQEYVPRTSNKKFWLDQLF 901
KIVHQ+E+ EK H V A C PV++ E++ V + QL
Sbjct: 498 KIVHQDEISEVLHEKNHVVSLAHCCPVKVKGESEDDDVDL---------------IKQLS 542
Query: 902 LKLSEEFPEMTILDYEEYLQMESFVVSVCFKDKCLYRRTGDSQNIPALQTMYFCCMWSVA 1081
K+ + I + E LQ+ SF S+C KDKC++R + S + ++ CC WS+A
Sbjct: 543 AKILKTVSGAQIHESENCLQVASFKGSLCLKDKCMHRSSSSSS-----EAVFLCCNWSIA 597
Query: 1082 DKNLAWEVTSVMK 1120
D L WE+ + +K
Sbjct: 598 DLELGWEIINAIK 610
>ref|XP_004498247.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 3-II-like [Cicer arietinum]
Length = 532
Score = 339 bits (870), Expect = 1e-90
Identities = 164/259 (63%), Positives = 202/259 (77%)
Frame = +2
Query: 2 NLYYKMLINWTSQKVKDSYATRNAFDFKHVYSFDRSLVNAPGPCVLFATPGMITGGFSLE 181
N+YYKMLI WTSQK+KD+Y+T NAFDFK+V+ F+RS+++A GPCVLFATPGMI+GGFSLE
Sbjct: 275 NMYYKMLIGWTSQKIKDTYSTHNAFDFKNVHKFERSMIDATGPCVLFATPGMISGGFSLE 334
Query: 182 VFKQWAPYEENLITLPGYCVAGTVGHKLMSAKIPMRISVDQDTQIDVRCQIHQLSFSPHT 361
VFK WAP E NL+TLPGYCVAGTVGHKL S K P +I+ D DTQIDVRCQIHQL+FSPHT
Sbjct: 335 VFKHWAPSENNLVTLPGYCVAGTVGHKLTSGK-PTKINTDPDTQIDVRCQIHQLAFSPHT 393
Query: 362 DAKGITDLIKFLSPKHVILVHGEKPKMESLKGKFESEFRIQCYVPANNEIVSIPSAHYVK 541
D+KGI DL+KFLSPKHVILVHGEKPKM SLK + SE IQCY PANNE V IPS YV
Sbjct: 394 DSKGIMDLVKFLSPKHVILVHGEKPKMASLKERIHSELGIQCYNPANNETVCIPSTQYVN 453
Query: 542 AEASGIFLQSTCSPNFRFLRTSFKSNSDSNVVGMIDKPFQRACDIRVAEGILTTQSGHNP 721
AEASG F+++ +PNF+F + S + S+S ++ P + D RVA+G+L +
Sbjct: 454 AEASGTFIRNCLNPNFQFQKCSSEDTSNSTMIDKNLTPKLQVEDERVADGVLVMEKSKKA 513
Query: 722 KIVHQNELEIFAEEKIHEV 778
KIV+++EL + +EK +V
Sbjct: 514 KIVNRDELLLMLDEKKRKV 532