BLASTX nr result

ID: Rauwolfia21_contig00014498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00014498
         (1264 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004308992.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...    58   9e-06

>ref|XP_004308992.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Fragaria vesca
            subsp. vesca]
          Length = 1662

 Score = 57.8 bits (138), Expect = 9e-06
 Identities = 36/71 (50%), Positives = 44/71 (61%), Gaps = 7/71 (9%)
 Frame = -1

Query: 1108 SLATVLAQVLRGYDEIKMSTLRLRLMDDENDNS*DAFS-------CKYSKFW*YAAPFLL 950
            SLA   AQ+L+ YDEI M+T RLRL +DEND S DA S          +    +A+  LL
Sbjct: 1228 SLAIAQAQILQAYDEINMATTRLRLREDENDKSLDALSEDELPSANVLNTSEKFASLSLL 1287

Query: 949  SCIKGQLCYLK 917
            SCIKG+L YLK
Sbjct: 1288 SCIKGKLRYLK 1298


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