BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00014098
         (558 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]       312   4e-83
gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum de...   310   2e-82
ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper...   308   4e-82
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]       302   3e-80
gb|EMJ26460.1| hypothetical protein PRUPE_ppa001524mg [Prunus pe...   301   5e-80
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa...   301   5e-80
ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   301   7e-80
gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tu...   301   7e-80
gb|AAT38699.2| RNA dependent RNA polymerase family protein [Sola...   301   7e-80
gb|ABI34311.1| RNA dependent RNA polymerase family protein [Sola...   301   7e-80
ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   299   3e-79
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   298   8e-79
gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tu...   298   8e-79
ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   296   2e-78
emb|CBI26820.3| unnamed protein product [Vitis vinifera]              295   7e-78
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...   295   7e-78
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [...   293   2e-77
emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis hall...   291   7e-77
ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis ...   291   7e-77
ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis ...   290   1e-76

>emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]
          Length = 775

 Score =  312 bits (799), Expect = 4e-83
 Identities = 145/185 (78%), Positives = 163/185 (88%)
 Frame = +2

Query: 2    RPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYTPAPSVQLDDEVTIEEIEEYFANY 181
            RPHPNECSGSDLDGDIYFVCWD DLIPPRQV PMDYTPAPS+QLD +VTIEE+EEYF NY
Sbjct: 484  RPHPNECSGSDLDGDIYFVCWDPDLIPPRQVQPMDYTPAPSIQLDHDVTIEEVEEYFTNY 543

Query: 182  ILNDSVGIIAHAHVAFADREKKKAMSDPCLELAELHSIAVDFPKTGVPAKIPPHLRVKEY 361
            ++ND +G+IA+AHV FADRE   AMSDPC+ELA+L SIAVDFPKTGVPA+IP  LR KEY
Sbjct: 544  MVNDGLGVIANAHVVFADREPNMAMSDPCIELAQLFSIAVDFPKTGVPAEIPSQLRPKEY 603

Query: 362  PDFMEKPDKPTYVSENVLGKLFREVRDKAPHKNSIESFTREVARRSYDTDLQVPGFEDYI 541
            PDFMEKPDK TY SE V+GKLFREV+DK    +SI +FTR+VARRSYDTDL+V GFEDYI
Sbjct: 604  PDFMEKPDKTTYHSEKVIGKLFREVKDKTTQASSITTFTRDVARRSYDTDLEVDGFEDYI 663

Query: 542  DEAFE 556
            DEAF+
Sbjct: 664  DEAFD 668


>gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1139

 Score =  310 bits (793), Expect = 2e-82
 Identities = 144/185 (77%), Positives = 163/185 (88%)
 Frame = +2

Query: 2    RPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYTPAPSVQLDDEVTIEEIEEYFANY 181
            RPHPNECSGSDLDGDIYFVCWD D+IPPRQV PM+Y PAPS+QLD +VTIEE+EEYF NY
Sbjct: 816  RPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQPMEYPPAPSIQLDHDVTIEEVEEYFTNY 875

Query: 182  ILNDSVGIIAHAHVAFADREKKKAMSDPCLELAELHSIAVDFPKTGVPAKIPPHLRVKEY 361
            I+NDS+GIIA+AHV FADRE   AMSDPC +LAEL SIAVDFPKTGVPA+IP  LR KEY
Sbjct: 876  IVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDFPKTGVPAEIPSQLRPKEY 935

Query: 362  PDFMEKPDKPTYVSENVLGKLFREVRDKAPHKNSIESFTREVARRSYDTDLQVPGFEDYI 541
            PDFM+KPDK TY+SE V+GKLFR+V+DKAP  +SI  FTR+VARRSYD DL+V GFEDYI
Sbjct: 936  PDFMDKPDKTTYISERVIGKLFRKVKDKAPQASSIAIFTRDVARRSYDVDLEVDGFEDYI 995

Query: 542  DEAFE 556
            DEAF+
Sbjct: 996  DEAFD 1000


>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
            gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
            [Solanum lycopersicum]
          Length = 1114

 Score =  308 bits (790), Expect = 4e-82
 Identities = 142/185 (76%), Positives = 164/185 (88%)
 Frame = +2

Query: 2    RPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYTPAPSVQLDDEVTIEEIEEYFANY 181
            RPHPNECSGSDLDGDIYFVCWD D+IPPRQV PM+Y PAPS+QLD +VTIEE+EEYF NY
Sbjct: 791  RPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQPMEYPPAPSIQLDHDVTIEEVEEYFTNY 850

Query: 182  ILNDSVGIIAHAHVAFADREKKKAMSDPCLELAELHSIAVDFPKTGVPAKIPPHLRVKEY 361
            I+NDS+GIIA+AHV FADRE   AMSDPC +LAEL SIAVDFPKTGVPA+IP  LR KEY
Sbjct: 851  IVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDFPKTGVPAEIPSQLRPKEY 910

Query: 362  PDFMEKPDKPTYVSENVLGKLFREVRDKAPHKNSIESFTREVARRSYDTDLQVPGFEDYI 541
            PDFM+KPDK +Y+SE V+GKLFR+V+DKAP  +SI +FTR+VARRSYD D++V GFEDYI
Sbjct: 911  PDFMDKPDKTSYISERVIGKLFRKVKDKAPQASSIATFTRDVARRSYDADMEVDGFEDYI 970

Query: 542  DEAFE 556
            DEAF+
Sbjct: 971  DEAFD 975


>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
          Length = 1116

 Score =  302 bits (774), Expect = 3e-80
 Identities = 141/184 (76%), Positives = 161/184 (87%)
 Frame = +2

Query: 2    RPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYTPAPSVQLDDEVTIEEIEEYFANY 181
            RPHPNECSGSDLDGDIYFVCWD DLIPPRQV  MDYTPAP+ QLD +VTIEE+EEYF NY
Sbjct: 793  RPHPNECSGSDLDGDIYFVCWDPDLIPPRQVQSMDYTPAPTTQLDHDVTIEEVEEYFTNY 852

Query: 182  ILNDSVGIIAHAHVAFADREKKKAMSDPCLELAELHSIAVDFPKTGVPAKIPPHLRVKEY 361
            I+NDS+GIIA+AHV FADRE   AMSDPC +LA+L SIAVDFPKTGVPA+IP  LR KEY
Sbjct: 853  IINDSLGIIANAHVVFADREPDMAMSDPCKQLAQLFSIAVDFPKTGVPAEIPSQLRPKEY 912

Query: 362  PDFMEKPDKPTYVSENVLGKLFREVRDKAPHKNSIESFTREVARRSYDTDLQVPGFEDYI 541
            PDFMEKPDKPTY SE V+GKLF++V++K P  +SI +FTR+VAR+SYD+D+ V GFEDYI
Sbjct: 913  PDFMEKPDKPTYPSEKVIGKLFQKVKNKTPQASSIATFTRDVARKSYDSDMIVDGFEDYI 972

Query: 542  DEAF 553
            DEAF
Sbjct: 973  DEAF 976


>gb|EMJ26460.1| hypothetical protein PRUPE_ppa001524mg [Prunus persica]
          Length = 808

 Score =  301 bits (772), Expect = 5e-80
 Identities = 139/184 (75%), Positives = 161/184 (87%)
 Frame = +2

Query: 2    RPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYTPAPSVQLDDEVTIEEIEEYFANY 181
            RPHPNECSGSDLDGDIYFVCWD +LIP RQ+ PMDYTPAP++ LD  VTIEE+EEYF NY
Sbjct: 480  RPHPNECSGSDLDGDIYFVCWDDELIPSRQIQPMDYTPAPTIALDHAVTIEEVEEYFVNY 539

Query: 182  ILNDSVGIIAHAHVAFADREKKKAMSDPCLELAELHSIAVDFPKTGVPAKIPPHLRVKEY 361
            ++NDS+GIIA+AH AFADR+  KAMS PC+ELA+L SIAVDFPKTGVPA IP HLRVKE+
Sbjct: 540  MVNDSLGIIANAHTAFADRQPSKAMSKPCIELAKLFSIAVDFPKTGVPAIIPQHLRVKEF 599

Query: 362  PDFMEKPDKPTYVSENVLGKLFREVRDKAPHKNSIESFTREVARRSYDTDLQVPGFEDYI 541
            PDFMEKPDKPTY S NV+G+LFREV+D  PH  SI SF+REVAR+SYD D++V GFEDYI
Sbjct: 600  PDFMEKPDKPTYQSCNVIGELFREVKDVEPHDGSIRSFSREVARQSYDRDMEVDGFEDYI 659

Query: 542  DEAF 553
            ++AF
Sbjct: 660  EDAF 663


>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
            gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
            [Nicotiana glutinosa]
          Length = 1117

 Score =  301 bits (772), Expect = 5e-80
 Identities = 141/184 (76%), Positives = 159/184 (86%)
 Frame = +2

Query: 2    RPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYTPAPSVQLDDEVTIEEIEEYFANY 181
            RPHPNECSGSDLDGDIYFVCWD DL+PPRQ  PMDYTPAPS QLD +VTIEE+EEYF NY
Sbjct: 794  RPHPNECSGSDLDGDIYFVCWDPDLVPPRQFQPMDYTPAPSTQLDHDVTIEEVEEYFTNY 853

Query: 182  ILNDSVGIIAHAHVAFADREKKKAMSDPCLELAELHSIAVDFPKTGVPAKIPPHLRVKEY 361
            I+NDS+GIIA+AHV FADRE   AMSDPC +LA+L SIAVDFPKTGVPA+IP  LR KEY
Sbjct: 854  IVNDSLGIIANAHVVFADREPDMAMSDPCKQLAQLFSIAVDFPKTGVPAEIPSQLRPKEY 913

Query: 362  PDFMEKPDKPTYVSENVLGKLFREVRDKAPHKNSIESFTREVARRSYDTDLQVPGFEDYI 541
            PDFMEKPDKPTY SE V+GKLF++V+DK P  +SI +FT +VAR+SYD D+ V GFEDYI
Sbjct: 914  PDFMEKPDKPTYHSEKVIGKLFQKVKDKTPQASSIANFTMDVARKSYDGDMIVNGFEDYI 973

Query: 542  DEAF 553
            DEAF
Sbjct: 974  DEAF 977


>ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Solanum
            tuberosum] gi|565401229|ref|XP_006366110.1| PREDICTED:
            RNA-dependent RNA polymerase 1-like isoform X2 [Solanum
            tuberosum]
          Length = 1115

 Score =  301 bits (771), Expect = 7e-80
 Identities = 142/186 (76%), Positives = 162/186 (87%), Gaps = 1/186 (0%)
 Frame = +2

Query: 2    RPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYTPAPSVQLDDEVTIEEIEEYFANY 181
            RPHPNECSGSDLDGDIYFVCWD D+IPPRQV  M+Y PAPS+QLD +VTIEE+EEYF NY
Sbjct: 791  RPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEYPPAPSIQLDHDVTIEEVEEYFTNY 850

Query: 182  ILNDSVGIIAHAHVAFADREKKKAMSDPCLELAELHSIAVDFPKTGVPAKIPPHLRVKEY 361
            I+NDS+GIIA+AHV FADRE   AMSDPC +LAEL SIAVDFPKTGVPA+IPP LR KEY
Sbjct: 851  IVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELCSIAVDFPKTGVPAEIPPQLRPKEY 910

Query: 362  PDFMEK-PDKPTYVSENVLGKLFREVRDKAPHKNSIESFTREVARRSYDTDLQVPGFEDY 538
            PDFM+K PDK TY+SE V+GKL+R+V+DKAP  +S   FTR+VARRSYD DL+V GFEDY
Sbjct: 911  PDFMDKPPDKTTYISERVIGKLYRKVKDKAPQASSTAIFTRDVARRSYDADLEVDGFEDY 970

Query: 539  IDEAFE 556
            IDEAF+
Sbjct: 971  IDEAFD 976


>gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1115

 Score =  301 bits (771), Expect = 7e-80
 Identities = 143/186 (76%), Positives = 161/186 (86%), Gaps = 1/186 (0%)
 Frame = +2

Query: 2    RPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYTPAPSVQLDDEVTIEEIEEYFANY 181
            RPHPNECSGSDLDGDIYFVCWD D+IPPRQV  M+Y PAPS+QLD  VTIEE+EEYF NY
Sbjct: 791  RPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEYPPAPSIQLDHNVTIEEVEEYFTNY 850

Query: 182  ILNDSVGIIAHAHVAFADREKKKAMSDPCLELAELHSIAVDFPKTGVPAKIPPHLRVKEY 361
            I+NDS+GIIA+AHV FADRE   AMSDPC +LAEL SIAVDFPKTGVPA+IP  LR KEY
Sbjct: 851  IVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDFPKTGVPAEIPSQLRPKEY 910

Query: 362  PDFMEK-PDKPTYVSENVLGKLFREVRDKAPHKNSIESFTREVARRSYDTDLQVPGFEDY 538
            PDFM+K PDK TY+SE V+GKLFR+V+DKAP  +SI  FTR+VARRSYD DL+V GFEDY
Sbjct: 911  PDFMDKPPDKTTYISERVIGKLFRKVKDKAPQASSIAIFTRDVARRSYDADLEVDGFEDY 970

Query: 539  IDEAFE 556
            IDEAF+
Sbjct: 971  IDEAFD 976


>gb|AAT38699.2| RNA dependent RNA polymerase family protein [Solanum demissum]
          Length = 963

 Score =  301 bits (771), Expect = 7e-80
 Identities = 143/186 (76%), Positives = 161/186 (86%), Gaps = 1/186 (0%)
 Frame = +2

Query: 2    RPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYTPAPSVQLDDEVTIEEIEEYFANY 181
            RPHPNECSGSDLDGDIYFVCWD D+IPPRQV  M+Y PAPS+QLD  VTIEE+EEYF NY
Sbjct: 639  RPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEYPPAPSIQLDHNVTIEEVEEYFTNY 698

Query: 182  ILNDSVGIIAHAHVAFADREKKKAMSDPCLELAELHSIAVDFPKTGVPAKIPPHLRVKEY 361
            I+NDS+GIIA+AHV FADRE   AMSDPC +LAEL SIAVDFPKTGVPA+IP  LR KEY
Sbjct: 699  IVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDFPKTGVPAEIPSQLRPKEY 758

Query: 362  PDFMEK-PDKPTYVSENVLGKLFREVRDKAPHKNSIESFTREVARRSYDTDLQVPGFEDY 538
            PDFM+K PDK TY+SE V+GKLFR+V+DKAP  +SI  FTR+VARRSYD DL+V GFEDY
Sbjct: 759  PDFMDKPPDKTTYISERVIGKLFRKVKDKAPQASSIAIFTRDVARRSYDADLEVDGFEDY 818

Query: 539  IDEAFE 556
            IDEAF+
Sbjct: 819  IDEAFD 824


>gb|ABI34311.1| RNA dependent RNA polymerase family protein [Solanum demissum]
          Length = 963

 Score =  301 bits (771), Expect = 7e-80
 Identities = 142/186 (76%), Positives = 162/186 (87%), Gaps = 1/186 (0%)
 Frame = +2

Query: 2    RPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYTPAPSVQLDDEVTIEEIEEYFANY 181
            RPHPNECSGSDLDGDIYFVCWD D+IPPRQV PM+Y PAPS+QLD +VTIEE+EEYF NY
Sbjct: 639  RPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQPMEYPPAPSIQLDHDVTIEEVEEYFTNY 698

Query: 182  ILNDSVGIIAHAHVAFADREKKKAMSDPCLELAELHSIAVDFPKTGVPAKIPPHLRVKEY 361
            I+NDS+GII++AHV FADRE   AMSDPC +LAEL SIAVDFPKTGVPA+IP  LR KEY
Sbjct: 699  IVNDSLGIISNAHVVFADREPDMAMSDPCKKLAELCSIAVDFPKTGVPAEIPSQLRPKEY 758

Query: 362  PDFMEK-PDKPTYVSENVLGKLFREVRDKAPHKNSIESFTREVARRSYDTDLQVPGFEDY 538
            PDFM+K PDK TY+SE V+GKLFR+V+DKAP  +S   FTR+VARRSYD DL+V GFEDY
Sbjct: 759  PDFMDKPPDKTTYISERVIGKLFRKVKDKAPQASSTAIFTRDVARRSYDADLEVDGFEDY 818

Query: 539  IDEAFE 556
            IDEAF+
Sbjct: 819  IDEAFD 824


>ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Solanum tuberosum]
          Length = 1115

 Score =  299 bits (765), Expect = 3e-79
 Identities = 141/186 (75%), Positives = 161/186 (86%), Gaps = 1/186 (0%)
 Frame = +2

Query: 2    RPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYTPAPSVQLDDEVTIEEIEEYFANY 181
            RPHPNECSGSDLDGDIYFVCWD D+IPPRQV  M+Y PAPS+QLD +VTIEE+EEYF NY
Sbjct: 791  RPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEYPPAPSIQLDHDVTIEEVEEYFTNY 850

Query: 182  ILNDSVGIIAHAHVAFADREKKKAMSDPCLELAELHSIAVDFPKTGVPAKIPPHLRVKEY 361
            I+NDS+GIIA+AHV FADRE   AMSDPC +LAEL SIAVDFPKTGVPA+IP  LR KEY
Sbjct: 851  IVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDFPKTGVPAEIPSQLRPKEY 910

Query: 362  PDFMEK-PDKPTYVSENVLGKLFREVRDKAPHKNSIESFTREVARRSYDTDLQVPGFEDY 538
            PDFM+K PDK TY+SE V+GKL+R+V+DKAP  +S   FTR+VARRSYD DL+V GFEDY
Sbjct: 911  PDFMDKPPDKTTYISERVIGKLYRKVKDKAPQASSTAIFTRDVARRSYDADLEVDGFEDY 970

Query: 539  IDEAFE 556
            IDEAF+
Sbjct: 971  IDEAFD 976


>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
          Length = 1132

 Score =  298 bits (762), Expect = 8e-79
 Identities = 138/183 (75%), Positives = 159/183 (86%)
 Frame = +2

Query: 2    RPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYTPAPSVQLDDEVTIEEIEEYFANY 181
            RPHPNECSGSDLDGDIYFVCWD +LIPP+Q  PMDYTPA S+QLD +V IE++EEYF NY
Sbjct: 808  RPHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDHDVQIEDVEEYFTNY 867

Query: 182  ILNDSVGIIAHAHVAFADREKKKAMSDPCLELAELHSIAVDFPKTGVPAKIPPHLRVKEY 361
            I+NDS+GIIA+AH  FADRE  KA S+PCL+LAE  SIAVDFPKTGVPA+IPPHL VKEY
Sbjct: 868  IVNDSLGIIANAHTVFADREPHKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEY 927

Query: 362  PDFMEKPDKPTYVSENVLGKLFREVRDKAPHKNSIESFTREVARRSYDTDLQVPGFEDYI 541
            PDFMEKPDKPTY S+NV+GKLFR V+D APH + I  FT+EVARRSYD D++V GFED+I
Sbjct: 928  PDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRSYDPDMEVDGFEDHI 987

Query: 542  DEA 550
            D+A
Sbjct: 988  DDA 990


>gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1065

 Score =  298 bits (762), Expect = 8e-79
 Identities = 140/186 (75%), Positives = 161/186 (86%), Gaps = 1/186 (0%)
 Frame = +2

Query: 2    RPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYTPAPSVQLDDEVTIEEIEEYFANY 181
            RPHPNECSGSDLDGDIYFVCWD D+IPPRQV PM+Y PAPS+QLD +VTIEE+EEYF NY
Sbjct: 790  RPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQPMEYPPAPSIQLDHDVTIEEVEEYFTNY 849

Query: 182  ILNDSVGIIAHAHVAFADREKKKAMSDPCLELAELHSIAVDFPKTGVPAKIPPHLRVKEY 361
            I+NDS+GII++AHV FADRE   AMSDPC +LAEL SIAVDFPKTGVPA+IP   R KEY
Sbjct: 850  IVNDSLGIISNAHVVFADREPDMAMSDPCKKLAELCSIAVDFPKTGVPAEIPSQWRPKEY 909

Query: 362  PDFMEK-PDKPTYVSENVLGKLFREVRDKAPHKNSIESFTREVARRSYDTDLQVPGFEDY 538
            PDFM+K PDK TY+SE V+GKL+R+V+DKAP  +S   FTR+VARRSYD DL+V GFEDY
Sbjct: 910  PDFMDKPPDKTTYISERVIGKLYRKVKDKAPQASSTAIFTRDVARRSYDADLEVDGFEDY 969

Query: 539  IDEAFE 556
            IDEAF+
Sbjct: 970  IDEAFD 975


>ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Fragaria vesca subsp.
            vesca]
          Length = 1119

 Score =  296 bits (758), Expect = 2e-78
 Identities = 133/184 (72%), Positives = 160/184 (86%)
 Frame = +2

Query: 2    RPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYTPAPSVQLDDEVTIEEIEEYFANY 181
            RPHPNECSGSDLDGDIYFVCWD +LIPP+Q+ PMDYTPAP +++D +VTIEE+EEYF NY
Sbjct: 793  RPHPNECSGSDLDGDIYFVCWDPELIPPKQIQPMDYTPAPPIEMDQDVTIEEVEEYFVNY 852

Query: 182  ILNDSVGIIAHAHVAFADREKKKAMSDPCLELAELHSIAVDFPKTGVPAKIPPHLRVKEY 361
            I+NDS+GIIA+AH  FAD +  KAMS PCL+LA+L SIAVDFPKTGVPA+IPP L  KEY
Sbjct: 853  IVNDSLGIIANAHTVFADSKLDKAMSHPCLQLAKLFSIAVDFPKTGVPAEIPPELYAKEY 912

Query: 362  PDFMEKPDKPTYVSENVLGKLFREVRDKAPHKNSIESFTREVARRSYDTDLQVPGFEDYI 541
            PDFMEKPDK TY+S NV+G+LFREV+D APH +SI SFTR+VA + YD D++V GFEDY+
Sbjct: 913  PDFMEKPDKRTYISHNVIGQLFREVKDIAPHDSSIASFTRQVATKCYDPDMEVDGFEDYL 972

Query: 542  DEAF 553
            ++AF
Sbjct: 973  EDAF 976


>emb|CBI26820.3| unnamed protein product [Vitis vinifera]
          Length = 919

 Score =  295 bits (754), Expect = 7e-78
 Identities = 136/184 (73%), Positives = 160/184 (86%)
 Frame = +2

Query: 2    RPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYTPAPSVQLDDEVTIEEIEEYFANY 181
            RPHPNECSGSDLDGDIYFVCWD DLIPP+Q++PMDYTPAP+  LD +V IEE+EEYF NY
Sbjct: 592  RPHPNECSGSDLDGDIYFVCWDRDLIPPQQINPMDYTPAPTKVLDHDVMIEEVEEYFTNY 651

Query: 182  ILNDSVGIIAHAHVAFADREKKKAMSDPCLELAELHSIAVDFPKTGVPAKIPPHLRVKEY 361
            I+NDS+GIIA+AH  FAD+E  KA  DPC ELA+L SIAVDFPKTGVPA+IP +LRVKEY
Sbjct: 652  IVNDSLGIIANAHTVFADKEYDKAYCDPCTELAKLFSIAVDFPKTGVPAEIPRNLRVKEY 711

Query: 362  PDFMEKPDKPTYVSENVLGKLFREVRDKAPHKNSIESFTREVARRSYDTDLQVPGFEDYI 541
            PDFMEK DKPTY S++V+GKLFREV+D APH  +I SFTR+VAR+SYD D++V GFEDY+
Sbjct: 712  PDFMEKADKPTYESQSVIGKLFREVKDIAPHNCNIRSFTRDVARQSYDPDMEVVGFEDYV 771

Query: 542  DEAF 553
             +AF
Sbjct: 772  SDAF 775


>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score =  295 bits (754), Expect = 7e-78
 Identities = 136/184 (73%), Positives = 160/184 (86%)
 Frame = +2

Query: 2    RPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYTPAPSVQLDDEVTIEEIEEYFANY 181
            RPHPNECSGSDLDGDIYFVCWD DLIPP+Q++PMDYTPAP+  LD +V IEE+EEYF NY
Sbjct: 794  RPHPNECSGSDLDGDIYFVCWDRDLIPPQQINPMDYTPAPTKVLDHDVMIEEVEEYFTNY 853

Query: 182  ILNDSVGIIAHAHVAFADREKKKAMSDPCLELAELHSIAVDFPKTGVPAKIPPHLRVKEY 361
            I+NDS+GIIA+AH  FAD+E  KA  DPC ELA+L SIAVDFPKTGVPA+IP +LRVKEY
Sbjct: 854  IVNDSLGIIANAHTVFADKEYDKAYCDPCTELAKLFSIAVDFPKTGVPAEIPRNLRVKEY 913

Query: 362  PDFMEKPDKPTYVSENVLGKLFREVRDKAPHKNSIESFTREVARRSYDTDLQVPGFEDYI 541
            PDFMEK DKPTY S++V+GKLFREV+D APH  +I SFTR+VAR+SYD D++V GFEDY+
Sbjct: 914  PDFMEKADKPTYESQSVIGKLFREVKDIAPHNCNIRSFTRDVARQSYDPDMEVVGFEDYV 973

Query: 542  DEAF 553
             +AF
Sbjct: 974  SDAF 977


>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
            gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
            family protein [Populus trichocarpa]
          Length = 1133

 Score =  293 bits (749), Expect = 2e-77
 Identities = 134/184 (72%), Positives = 159/184 (86%)
 Frame = +2

Query: 2    RPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYTPAPSVQLDDEVTIEEIEEYFANY 181
            RPHPNECSGSDLDGDIYFVCWD +LIP +Q+SPMDYTP P +QLD +VTIEE+EEYF NY
Sbjct: 804  RPHPNECSGSDLDGDIYFVCWDPELIPSQQISPMDYTPEPPLQLDHDVTIEEVEEYFTNY 863

Query: 182  ILNDSVGIIAHAHVAFADREKKKAMSDPCLELAELHSIAVDFPKTGVPAKIPPHLRVKEY 361
            I+NDS+G+IA+AH A AD+E  KAMS+PC+ELA   SIAVDFPKTGVPA+IP +LR +EY
Sbjct: 864  IVNDSLGVIANAHTAHADKESLKAMSEPCVELARKFSIAVDFPKTGVPAEIPSNLRAREY 923

Query: 362  PDFMEKPDKPTYVSENVLGKLFREVRDKAPHKNSIESFTREVARRSYDTDLQVPGFEDYI 541
            PDFMEKPDKP+Y S NV+GKLFREV+D AP  +SI SFT +VAR+ YD D++V GFEDYI
Sbjct: 924  PDFMEKPDKPSYESRNVIGKLFREVKDIAPRTSSIRSFTSDVARQCYDPDMEVDGFEDYI 983

Query: 542  DEAF 553
            D+AF
Sbjct: 984  DDAF 987


>emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis halleri subsp. halleri]
          Length = 1107

 Score =  291 bits (745), Expect = 7e-77
 Identities = 135/184 (73%), Positives = 158/184 (85%)
 Frame = +2

Query: 2    RPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYTPAPSVQLDDEVTIEEIEEYFANY 181
            RPHPNECSGSDLDGDIYFVCWD +LIPPR   PMDYTP P+  LD +VTIEE+EEYFANY
Sbjct: 788  RPHPNECSGSDLDGDIYFVCWDQELIPPRTSEPMDYTPEPAQILDHDVTIEEVEEYFANY 847

Query: 182  ILNDSVGIIAHAHVAFADREKKKAMSDPCLELAELHSIAVDFPKTGVPAKIPPHLRVKEY 361
            I+NDS+GIIA+AH AFAD+E  KA SDPC+ELA   S+AVDFPKTGV A+IP HL VKEY
Sbjct: 848  IVNDSLGIIANAHTAFADKEPLKAFSDPCIELARKFSVAVDFPKTGVAAEIPQHLHVKEY 907

Query: 362  PDFMEKPDKPTYVSENVLGKLFREVRDKAPHKNSIESFTREVARRSYDTDLQVPGFEDYI 541
            PDFMEKPDKPTY S+NV+GKLFREV+++AP   SI+SFT +VA +SYD D++V GFE+Y+
Sbjct: 908  PDFMEKPDKPTYESKNVIGKLFREVKERAPPLISIKSFTLDVALKSYDKDMEVDGFEEYV 967

Query: 542  DEAF 553
            DEAF
Sbjct: 968  DEAF 971


>ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
            gi|297316317|gb|EFH46740.1| RNA-dependent RNA polymerase
            1 [Arabidopsis lyrata subsp. lyrata]
          Length = 1097

 Score =  291 bits (745), Expect = 7e-77
 Identities = 135/184 (73%), Positives = 158/184 (85%)
 Frame = +2

Query: 2    RPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYTPAPSVQLDDEVTIEEIEEYFANY 181
            RPHPNECSGSDLDGDIYFVCWD +LIPPR   PMDYTP P+  LD +VTIEE+EEYFANY
Sbjct: 778  RPHPNECSGSDLDGDIYFVCWDQELIPPRTSEPMDYTPEPAQILDHDVTIEEVEEYFANY 837

Query: 182  ILNDSVGIIAHAHVAFADREKKKAMSDPCLELAELHSIAVDFPKTGVPAKIPPHLRVKEY 361
            I+NDS+GIIA+AH AFAD+E  KA SDPC+ELA   S+AVDFPKTGV A+IP HL VKEY
Sbjct: 838  IVNDSLGIIANAHTAFADKEPLKAFSDPCIELARKFSVAVDFPKTGVAAEIPQHLHVKEY 897

Query: 362  PDFMEKPDKPTYVSENVLGKLFREVRDKAPHKNSIESFTREVARRSYDTDLQVPGFEDYI 541
            PDFMEKPDKPTY S+NV+GKLFREV+++AP   SI+SFT +VA +SYD D++V GFE+Y+
Sbjct: 898  PDFMEKPDKPTYESKNVIGKLFREVKERAPPLISIKSFTLDVALKSYDKDMEVDGFEEYV 957

Query: 542  DEAF 553
            DEAF
Sbjct: 958  DEAF 961


>ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
            gi|297338672|gb|EFH69089.1| RNA-dependent RNA polymerase
            1 [Arabidopsis lyrata subsp. lyrata]
          Length = 1107

 Score =  290 bits (743), Expect = 1e-76
 Identities = 135/184 (73%), Positives = 158/184 (85%)
 Frame = +2

Query: 2    RPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYTPAPSVQLDDEVTIEEIEEYFANY 181
            RPHPNECSGSDLDGDIYFVCWD +LIPPR   PMDYTP P+  LD +VTIEE+EEYFANY
Sbjct: 788  RPHPNECSGSDLDGDIYFVCWDQELIPPRTSEPMDYTPEPAQILDHDVTIEEVEEYFANY 847

Query: 182  ILNDSVGIIAHAHVAFADREKKKAMSDPCLELAELHSIAVDFPKTGVPAKIPPHLRVKEY 361
            I+NDS+GIIA+AH AFAD+E  KA SDPC+ELA   S+AVDFPKTGV A+IP HL VKEY
Sbjct: 848  IVNDSLGIIANAHTAFADKEPLKAFSDPCIELARKFSVAVDFPKTGVAAEIPQHLYVKEY 907

Query: 362  PDFMEKPDKPTYVSENVLGKLFREVRDKAPHKNSIESFTREVARRSYDTDLQVPGFEDYI 541
            PDFMEKPDKPTY S+NV+GKLFREV+++AP   SI+SFT +VA +SYD D++V GFE+Y+
Sbjct: 908  PDFMEKPDKPTYESKNVIGKLFREVKERAPPLISIKSFTLDVALKSYDKDMEVDGFEEYV 967

Query: 542  DEAF 553
            DEAF
Sbjct: 968  DEAF 971