BLASTX nr result

ID: Rauwolfia21_contig00013244 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00013244
         (589 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004246628.1| PREDICTED: uncharacterized protein LOC101262...    58   2e-06
ref|XP_006366137.1| PREDICTED: neurofilament medium polypeptide-...    57   4e-06

>ref|XP_004246628.1| PREDICTED: uncharacterized protein LOC101262648 [Solanum
           lycopersicum]
          Length = 375

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 32/70 (45%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
 Frame = +1

Query: 1   VPVYNQHYANQDYGVPTTYQQYPPGYGS-TSYVVEYXXXXXXXXXXXXXXYLPAHDQMFS 177
           +PVYNQ Y NQDYG+      Y PGY + T Y +EY                  + QMFS
Sbjct: 310 MPVYNQSYMNQDYGLT----MYDPGYNAHTGYAMEYGYHQPSYVPPPPPTTYLNNAQMFS 365

Query: 178 DENPNACSVM 207
           DENPN CSVM
Sbjct: 366 DENPNGCSVM 375


>ref|XP_006366137.1| PREDICTED: neurofilament medium polypeptide-like isoform X1
           [Solanum tuberosum]
          Length = 333

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 32/69 (46%), Positives = 36/69 (52%)
 Frame = +1

Query: 1   VPVYNQHYANQDYGVPTTYQQYPPGYGSTSYVVEYXXXXXXXXXXXXXXYLPAHDQMFSD 180
           +P+ +  Y NQDYG  T    Y  GYG T YVVEY              YL A  QMFSD
Sbjct: 270 MPMQHHGYMNQDYGATT----YDYGYGHTGYVVEYGHQPQYVPPPPPPTYLNA-PQMFSD 324

Query: 181 ENPNACSVM 207
           ENPN C +M
Sbjct: 325 ENPNGCFIM 333


Top