BLASTX nr result

ID: Rauwolfia21_contig00012560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00012560
         (295 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352534.1| PREDICTED: 30S ribosomal protein S10, chloro...    60   2e-07
ref|XP_004248372.1| PREDICTED: 30S ribosomal protein S10, chloro...    56   4e-06

>ref|XP_006352534.1| PREDICTED: 30S ribosomal protein S10, chloroplastic-like [Solanum
           tuberosum]
          Length = 188

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 37/70 (52%), Positives = 44/70 (62%)
 Frame = -3

Query: 245 MAMXXXXXXXXLFPICNSSTIISTRPKLSVLSFPSNSEKLHTFLQKPSRLLVLKVSAAPE 66
           MA+        LFP+CNSS+I S +PK S+LS PSNS KL  F Q  SR+   KV A+PE
Sbjct: 1   MAISSSSLSAALFPVCNSSSI-SAQPKFSLLSLPSNSVKLQVFNQ--SRVSTTKVFASPE 57

Query: 65  VLDTQETTAD 36
           VLD Q   AD
Sbjct: 58  VLDAQNVEAD 67


>ref|XP_004248372.1| PREDICTED: 30S ribosomal protein S10, chloroplastic-like [Solanum
           lycopersicum]
          Length = 188

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 36/70 (51%), Positives = 43/70 (61%)
 Frame = -3

Query: 245 MAMXXXXXXXXLFPICNSSTIISTRPKLSVLSFPSNSEKLHTFLQKPSRLLVLKVSAAPE 66
           MA+        LFP+CNSS+I S +PK S+LS  SNS KL  F Q  SR+   KV A+PE
Sbjct: 1   MAISSSSLSAALFPMCNSSSI-SAQPKFSLLSLHSNSVKLQVFNQ--SRVSTTKVFASPE 57

Query: 65  VLDTQETTAD 36
           VLD Q   AD
Sbjct: 58  VLDAQNVEAD 67


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