BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00011463
         (3565 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB91256.1| 5'-3' exoribonuclease 3 [Morus notabilis]              831   0.0  
ref|XP_002523870.1| 5'->3' exoribonuclease, putative [Ricinus co...   766   0.0  
gb|EMJ26606.1| hypothetical protein PRUPE_ppa000605mg [Prunus pe...   717   0.0  
gb|EOY14997.1| 5'-3' exoribonuclease 3 isoform 2 [Theobroma cacao]    712   0.0  
gb|EOY14996.1| 5'-3' exoribonuclease 3 isoform 1 [Theobroma cacao]    710   0.0  
ref|XP_006601346.1| PREDICTED: 5'-3' exoribonuclease 3-like isof...   709   0.0  
ref|XP_003549459.1| PREDICTED: 5'-3' exoribonuclease 3-like isof...   709   0.0  
ref|XP_002306919.2| EXORIBONUCLEASE 2 family protein [Populus tr...   707   0.0  
gb|EAY76660.1| hypothetical protein OsI_04616 [Oryza sativa Indi...   707   0.0  
ref|NP_001044947.1| Os01g0872700 [Oryza sativa Japonica Group] g...   707   0.0  
ref|XP_006300301.1| hypothetical protein CARUB_v10019710mg [Caps...   707   0.0  
ref|XP_006596562.1| PREDICTED: 5'-3' exoribonuclease 3-like isof...   706   0.0  
dbj|BAB86550.1| putative 5-3 exoribonuclease [Oryza sativa Japon...   706   0.0  
ref|XP_003545041.1| PREDICTED: 5'-3' exoribonuclease 3-like isof...   706   0.0  
ref|XP_006645089.1| PREDICTED: 5'-3' exoribonuclease 3-like isof...   704   0.0  
ref|XP_004972700.1| PREDICTED: 5'-3' exoribonuclease 3-like isof...   703   0.0  
ref|XP_006390286.1| hypothetical protein EUTSA_v10018062mg [Eutr...   702   0.0  
ref|XP_004972701.1| PREDICTED: 5'-3' exoribonuclease 3-like isof...   702   0.0  
ref|XP_003564736.1| PREDICTED: 5'-3' exoribonuclease 3-like [Bra...   701   0.0  
ref|NP_565114.1| 5'-3' exoribonuclease 3 [Arabidopsis thaliana] ...   701   0.0  

>gb|EXB91256.1| 5'-3' exoribonuclease 3 [Morus notabilis]
          Length = 1010

 Score =  831 bits (2146), Expect = 0.0
 Identities = 447/858 (52%), Positives = 577/858 (67%), Gaps = 17/858 (1%)
 Frame = -3

Query: 3521 MGVPSFYRWLVNRYPKTVVDVRENTSTDL----------EFDNLYLDMNGIIHNCFHPES 3372
            MGVPSFYRWLV++YPK V +  E T   L          EFDNLYLDMNGIIH CFHPE 
Sbjct: 1    MGVPSFYRWLVDKYPKVVENAIEETEISLNTSLPNPNGIEFDNLYLDMNGIIHPCFHPEE 60

Query: 3371 DNVPAPTTFEDVFNNIYDYIDKLFDIVKPRKLLYMAIDGVAPRAKMNQQRARRFRTAKDN 3192
            +++  P+TFE+VF N+++YID+LF+IV+PRKLLYMA+DGVAPRAKMNQQRARRFRT+KD 
Sbjct: 61   EDISTPSTFEEVFKNMFEYIDRLFNIVRPRKLLYMAVDGVAPRAKMNQQRARRFRTSKDK 120

Query: 3191 ETAEEMEETLRRQFETEGKQVLPK-EQSELSDSNIITPGTQFMCSLSKKLQQYIKLQMTE 3015
            E AEE E  +R+QFE EGK+VLPK E+SE+SDSNIITPGT+FM  LS+ L+ YI L++  
Sbjct: 121  EIAEEEELKVRQQFEMEGKKVLPKEEESEVSDSNIITPGTEFMHKLSEALKSYISLRLRN 180

Query: 3014 DTRWRSIQVILSDANVPGEGEHKIMSFIRSQRCCADYDPNTRHCLYGLDADLIMLALATH 2835
            D  WR+I+VILSDANVPGEGEHKIMSFIR QR    Y+ NTRHCLYGLDADLI+L+LATH
Sbjct: 181  DLGWRNIKVILSDANVPGEGEHKIMSFIRLQRTLPSYNANTRHCLYGLDADLILLSLATH 240

Query: 2834 EVHFSILREDILAQEETLNCVSELQRTAQQEEE-DKQKSGGKQVETYNPEGPSMAEDKKV 2658
            EVHFSILRE++  QE+       ++ T+    E   QKS G      +     +A     
Sbjct: 241  EVHFSILRENVKVQEQNHRNFKSVRATSHSTAEFSPQKSRGWFNNVLDSADKCLA----- 295

Query: 2657 NGRAPTKKIPFQFLNVWILREYLQIDMCVDNLPEKLVGKVDLERIIDDFVFMCFFVGNDF 2478
               A   K P+QFL+VWILREYL++DM +D+ PE    K D ERI+DDF+FMCFFVGNDF
Sbjct: 296  ---ASVTKKPYQFLHVWILREYLELDMRIDDPPENF--KYDFERIVDDFIFMCFFVGNDF 350

Query: 2477 LPHMPTLAIHEGALDLLLHVYKNEFKNLGGYLIDAKRIEDKKAGYIKLKRVEKFILSVGV 2298
            LPH P+LAIHEGA+DLL+ +YKNE K +GGYL+D  R+EDKK G+IK  RVE+FILSVG 
Sbjct: 351  LPHTPSLAIHEGAIDLLMTIYKNELKKIGGYLVDMNRVEDKKGGFIKPSRVERFILSVGA 410

Query: 2297 YEDKIFKKRTEMRDRKIRRIIDAENADSQECFGAKFERDSWFSDCTFSNGKASGDTYPPG 2118
            +E+KIFKKR+E+++RK+RR+    NAD ++  G+    ++  S C F + +A        
Sbjct: 411  HEEKIFKKRSEIQERKLRRLC-LNNADQEDSNGSCSATET--SSCAFLDVQAQ------- 460

Query: 2117 TSDGTKTSCTGIAQAN-ADVLKNTRELKQQLKEQIRQKSDTFRRCNLGVDKVKLGTPGYK 1941
              + +  + +G A  +  ++LKNT +LK++++  +R+K+D  +    GVDKV+LG+PGYK
Sbjct: 461  -LNNSAIAPSGDASFDYHEMLKNTNDLKEKVRHNLRRKADMLKG-GFGVDKVRLGSPGYK 518

Query: 1940 ERYYDEKFSTKNHGERERKRKEVVQKYTEGLCWVLNYYYAGVPSWNWFYPFHYGPFASDF 1761
            ERYY +KFS ++ GE E  RK +V+KY+EGL WVL YY++  PSWNWFYP+HYGPF SD 
Sbjct: 519  ERYYKKKFSAESPGEIESIRKRLVEKYSEGLLWVLLYYFSEPPSWNWFYPYHYGPFVSDL 578

Query: 1760 RGLSQVAIMFKKGLPFKPFDQLMAVLPPQSASVLPEACKKLILDKSSPLFKFYPTDFEVD 1581
            +GLSQV +  KKG+PF PFDQL++VLP +S   LP+A + L+ D  SP+  FYPTDFE+D
Sbjct: 579  KGLSQVKLRLKKGVPFNPFDQLLSVLPSRSGHALPKAYQALMND-DSPIVDFYPTDFEID 637

Query: 1580 LDGKRYLWQGICKLPFIQEECLLTETKLIENEFKEHEKQRNADAAHRXXXXXXXXXXXXX 1401
            +DGKR+ WQGICKLPFI EE LL+ET  +EN+    E++RN+    +             
Sbjct: 638  VDGKRFSWQGICKLPFIDEERLLSETTKLENDLGVEERERNS----KKLDQLLVYSTHKL 693

Query: 1400 XXXXXXXXXXXXSNVINIKTLMSNGISGFIRLEFNGLIATDFSDKSEDPDVLCVFYELPH 1221
                         NV    T +S+ I G + L     +      ++ED  VLCV+YE P 
Sbjct: 694  GSHILSVSKEQNQNVGKRGTSLSDEIGGVLWLHHEHTVV---DKENEDNSVLCVYYE-PP 749

Query: 1220 DCLPK-PHLLEGVVVPEKTISEEDLLDEPALWHEASNGFNRRPLNQFQKLKSCKKNEEPD 1044
             C P  P LLEGV  PEKTI E+D + E  LWHE       +  N  Q LK         
Sbjct: 750  GCGPHVPRLLEGVKCPEKTIREDD-IKETQLWHEYQGKPPSKYTNIQQGLKKVSIGANLA 808

Query: 1043 IM---HRYARTGWVGGRG 999
            +    HR  R+GW  GRG
Sbjct: 809  VQSSEHRRPRSGWRAGRG 826


>ref|XP_002523870.1| 5'->3' exoribonuclease, putative [Ricinus communis]
            gi|223536958|gb|EEF38596.1| 5'->3' exoribonuclease,
            putative [Ricinus communis]
          Length = 993

 Score =  766 bits (1977), Expect = 0.0
 Identities = 399/803 (49%), Positives = 527/803 (65%), Gaps = 3/803 (0%)
 Frame = -3

Query: 3521 MGVPSFYRWLVNRYPKTVVDVRENTSTDLEFDNLYLDMNGIIHNCFHPESDNVPAPTTFE 3342
            MGVP+FY+WLVN+YP  +     N    LEFDNLYLDMNGIIH CFHP+ D+   PTTF+
Sbjct: 1    MGVPAFYKWLVNKYPNVITSPNPN---GLEFDNLYLDMNGIIHPCFHPD-DHPSPPTTFD 56

Query: 3341 DVFNNIYDYIDKLFDIVKPRKLLYMAIDGVAPRAKMNQQRARRFRTAKDNETAEEMEETL 3162
            +VFNNIY YID +F IV+PR LLY+AIDGVAPRAKMNQQR+RRFR AKD E AE  EE L
Sbjct: 57   EVFNNIYKYIDHIFSIVRPRNLLYLAIDGVAPRAKMNQQRSRRFRNAKDTEIAEAEEERL 116

Query: 3161 RRQFETEGKQVLPKEQSELSDSNIITPGTQFMCSLSKKLQQYIKLQMTEDTRWRSIQVIL 2982
            R+++E +GKQVLPK+ SE+SDSNIITPGT+FM +LS KLQ+Y+   +  D  W++I+VIL
Sbjct: 117  RKEYEIQGKQVLPKQYSEVSDSNIITPGTEFMFTLSIKLQEYMISNINSDPAWKAIKVIL 176

Query: 2981 SDANVPGEGEHKIMSFIRSQRCCADYDPNTRHCLYGLDADLIMLALATHEVHFSILREDI 2802
            SDA+VPGEGEHKIMSFIR QR   DY+PNTRHCLYGLDADLIMLALA+HEVHFSILRE +
Sbjct: 177  SDASVPGEGEHKIMSFIRQQRMLPDYNPNTRHCLYGLDADLIMLALASHEVHFSILREVV 236

Query: 2801 LAQEETLNCVSELQRTAQQEEEDKQKSGGKQVET---YNPEGPSMAEDKKVNGRAPTKKI 2631
            L Q+    C+S    T+ Q   +  + G  + +T   ++ +  ++A+D     +      
Sbjct: 237  LLQQPQSICLS--AHTSLQGRIEFGEFGSSENKTKRRFSNDDNTLAKDVSFIEK------ 288

Query: 2630 PFQFLNVWILREYLQIDMCVDNLPEKLVGKVDLERIIDDFVFMCFFVGNDFLPHMPTLAI 2451
            P+QFL+VWILR+YL+++M + + PE      D ERIIDDFVFMCFF GNDF+P++PTL I
Sbjct: 289  PYQFLHVWILRDYLKLEMDIYDPPENFT--FDSERIIDDFVFMCFFAGNDFIPNLPTLQI 346

Query: 2450 HEGALDLLLHVYKNEFKNLGGYLIDAKRIEDKKAGYIKLKRVEKFILSVGVYEDKIFKKR 2271
            HE A+DLL+ VYK  FK LGGYL+D  ++   K  Y+ LKRVEKFIL +G YE+ IFKKR
Sbjct: 347  HERAVDLLMTVYKKNFKKLGGYLVDVHQVNSLKNDYLDLKRVEKFILLIGAYEEMIFKKR 406

Query: 2270 TEMRDRKIRRIIDAENADSQECFGAKFERDSWFSDCTFSNGKASGDTYPPGTSDGTKTSC 2091
            +E+R+R +R++    +A + +      E+D      +FS+  A        + D    S 
Sbjct: 407  SELRERMLRKLCQHSDAANAKELDGNVEQD--MLKISFSSLDAKAQI----SEDLVSVSA 460

Query: 2090 TGIAQANADVLKNTRELKQQLKEQIRQKSDTFRRCNLGVDKVKLGTPGYKERYYDEKFST 1911
              I+     VL+NT+  K++LK ++RQKSD F+      D VKLGT G+K+RYY++KFS 
Sbjct: 461  VSIS-LWFSVLQNTKRFKEELKARLRQKSDLFQNGGFRADTVKLGTTGWKKRYYEQKFSA 519

Query: 1910 KNHGERERKRKEVVQKYTEGLCWVLNYYYAGVPSWNWFYPFHYGPFASDFRGLSQVAIMF 1731
            +N  + E  RKE+VQKYTEGL WVL YY++ VPSW WFYP+H+ PFASD +G++QV   F
Sbjct: 520  ENPSDIELIRKEMVQKYTEGLLWVLGYYFSAVPSWTWFYPYHHAPFASDMKGMAQVKFKF 579

Query: 1730 KKGLPFKPFDQLMAVLPPQSASVLPEACKKLILDKSSPLFKFYPTDFEVDLDGKRYLWQG 1551
             KG PFKPFDQLM VLPP+SA  LP++ ++L++D+ S +  FYP +F++D+DGKR++WQG
Sbjct: 580  PKGSPFKPFDQLMGVLPPRSAHALPKSYRQLMIDERSSIIDFYPAEFQIDIDGKRFMWQG 639

Query: 1550 ICKLPFIQEECLLTETKLIENEFKEHEKQRNADAAHRXXXXXXXXXXXXXXXXXXXXXXX 1371
            ICKLPFI EE LL ETK +E E    E  +N +   +                       
Sbjct: 640  ICKLPFIDEERLLAETKKMEKELTRKEADKNVENVDKLFVRRENFSESQLLQLVSEFAAG 699

Query: 1370 XXSNVINIKTLMSNGISGFIRLEFNGLIATDFSDKSEDPDVLCVFYELPHDCLPKPHLLE 1191
               +++ IK                               + C+ +ELP      P  LE
Sbjct: 700  RPKDMVEIKN-----------------------------SLRCLLFELPKGSQFIPRPLE 730

Query: 1190 GVVVPEKTISEEDLLDEPALWHE 1122
            GV  PE+ I ++D++ E  LWHE
Sbjct: 731  GVKYPEQIIGDDDIM-ETQLWHE 752


>gb|EMJ26606.1| hypothetical protein PRUPE_ppa000605mg [Prunus persica]
          Length = 1076

 Score =  717 bits (1850), Expect = 0.0
 Identities = 412/875 (47%), Positives = 518/875 (59%), Gaps = 60/875 (6%)
 Frame = -3

Query: 3521 MGVPSFYRWLVNRYPKTVVDVREN-----------------TSTDLEFDNLYLDMNGIIH 3393
            MGVP+FYRWL  +YP  VVDV E                      LE+DNLYLDMNGIIH
Sbjct: 1    MGVPAFYRWLAEKYPLVVVDVVEEEPVVIDNISIPVDTSKPNPNGLEYDNLYLDMNGIIH 60

Query: 3392 NCFHPESDNVPAPTTFEDVFNNIYDYIDKLFDIVKPRKLLYMAIDGVAPRAKMNQQRARR 3213
             CFHPE    P+P+TF++VF  ++DYID+LF +V+PRKLLYMAIDGVAPRAKMNQQR+RR
Sbjct: 61   PCFHPEDR--PSPSTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118

Query: 3212 FRTAKDNETAEEMEETLRRQFETEGKQVLPKEQSELSDSNIITPGTQFMCSLSKKLQQYI 3033
            FR AKD   A   EE LR +FETEG+++ PK+QS++ DSN+ITPGTQFM  LS  LQ Y+
Sbjct: 119  FRAAKDAADAAAEEERLREEFETEGRKLPPKQQSQVVDSNVITPGTQFMAVLSVALQYYV 178

Query: 3032 KLQMTEDTRWRSIQVILSDANVPGEGEHKIMSFIRSQRCCADYDPNTRHCLYGLDADLIM 2853
             L++  D  W++++VILSDANVPGEGEHK+MS+IR QR    YDPNTRHCLYGLDADLIM
Sbjct: 179  HLRLNNDPGWKNVKVILSDANVPGEGEHKVMSYIRLQRNLPGYDPNTRHCLYGLDADLIM 238

Query: 2852 LALATHEVHFSILREDILA---QEETLNCVSELQRTAQQEEEDKQKSGGKQVETYNPEGP 2682
            LALATHEVHFSILRE +     Q++   C       A  E + K+K+G            
Sbjct: 239  LALATHEVHFSILREVVFTPGQQDKCFLCGQMGHLAANCEGKAKRKAG------------ 286

Query: 2681 SMAEDKKVNGRAPTKKIPFQFLNVWILREYLQIDMCVDNLPEKLVGKVDLERIIDDFVFM 2502
                D+K +G A  KK P+QFLN+W LREYL+++M + N P +    +D ERI+DDF+F+
Sbjct: 287  --EFDEKADGEAVAKK-PYQFLNIWTLREYLELEMQIPNSPIE----IDSERIVDDFIFI 339

Query: 2501 CFFVGNDFLPHMPTLAIHEGALDLLLHVYKNEFKNLGGYLIDAKRIEDKKAGYIKLKRVE 2322
            CFFVGNDFLPHMPTL I EGA++LL  VYK EF+ LGGYL D  +          L RVE
Sbjct: 340  CFFVGNDFLPHMPTLEIREGAINLLFAVYKKEFRALGGYLTDGSKPN--------LSRVE 391

Query: 2321 KFILSVGVYEDKIFKKRTEMRDRKIRRIIDAENADSQECFGAKFE--RDSWFSDCTFSNG 2148
             FI +VG YEDKIF+KR  +  R+  RI   E    +    A+ E   DS  +   F   
Sbjct: 392  HFIQAVGSYEDKIFQKRARLHQRQADRI-KREKGQLRRGDDARPEVQPDSLVAVSRFHGS 450

Query: 2147 K-ASGDTYPPGTSDGT---------------KTSCTGIAQANA------DVLKNTRELKQ 2034
            + ASG +  P    G                + S  G A   A      DV  N  ELK 
Sbjct: 451  RLASGHSPSPYQQSGKFNGQANPRKVARLSLEGSTIGAAIVEAENSLEGDVDGNKEELKA 510

Query: 2033 QLKEQIRQKSDTFRRCNLGVDKVKLGTPGYKERYYDEKFSTKNHGERERKRKEVVQKYTE 1854
            +LKE +R+KSD F   N   DKVKLG PG+K+RYY+EKFS K   ERE  RK+VV +YTE
Sbjct: 511  KLKEVLREKSDLFNSGNGDEDKVKLGEPGWKDRYYEEKFSAKTPEEREAIRKDVVLRYTE 570

Query: 1853 GLCWVLNYYYAGVPSWNWFYPFHYGPFASDFRGLSQVAIMFKKGLPFKPFDQLMAVLPPQ 1674
            GLCWV++YYY GV SW WFYP+HY PFASD + L Q+ I F  G PFKPF+QL+ V P  
Sbjct: 571  GLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKDLDQLNISFDLGSPFKPFNQLLGVFPAA 630

Query: 1673 SASVLPEACKKLILDKSSPLFKFYPTDFEVDLDGKRYLWQGICKLPFIQEECLLTETKLI 1494
            S+  LPE  +KL+ D +SP+  FYP DFEVD++GKR+ WQGI KLPFI E  LL E + +
Sbjct: 631  SSHALPEQYRKLMTDPNSPIIDFYPVDFEVDMNGKRFAWQGIAKLPFIDEARLLAEVEKL 690

Query: 1493 ENEFKEHEKQRNADAAHRXXXXXXXXXXXXXXXXXXXXXXXXXSNVINIKTLM------- 1335
            E+   E E +RN+                                 + +K  +       
Sbjct: 691  EHTLTEEETRRNSVMFEMLFVTSSHPLSVCIYSLDNRCKQLTDKERVEVKEQIDPKYRDA 750

Query: 1334 -SNGISGFIRLEFNGLIATDFSDKSE------DPDVLCVFYELP--HDCLPKPHLLEGVV 1182
             S G++G+I           F    E      D  V+C  Y LP  H  + +P    GV+
Sbjct: 751  CSEGMNGYISPCTGEPCPPVFRSPVESMEDIMDNQVICAIYRLPDGHKHITRPP--AGVI 808

Query: 1181 VPEKTISEEDLLDEPALWHEASNGFNRRPLNQFQK 1077
             P+K +S  DL   P LWHE S    R+P    ++
Sbjct: 809  FPKKIVSVGDLKPAPVLWHEES---GRKPFENARR 840


>gb|EOY14997.1| 5'-3' exoribonuclease 3 isoform 2 [Theobroma cacao]
          Length = 1110

 Score =  712 bits (1838), Expect = 0.0
 Identities = 407/872 (46%), Positives = 517/872 (59%), Gaps = 63/872 (7%)
 Frame = -3

Query: 3521 MGVPSFYRWLVNRYPKTVVDVREN-----------------TSTDLEFDNLYLDMNGIIH 3393
            MGVP+FYRWL  +YP  ++DV E                      LEFDNLYLDMNGIIH
Sbjct: 1    MGVPAFYRWLAEKYPLVIMDVIEEEPVVIDGVSIPVDTSKPNPNKLEFDNLYLDMNGIIH 60

Query: 3392 NCFHPESDNVPAPTTFEDVFNNIYDYIDKLFDIVKPRKLLYMAIDGVAPRAKMNQQRARR 3213
             CFHPE    P+PTTF++VF  ++DYID+LF +V+PRKLL+MAIDGVAPRAKMNQQR+RR
Sbjct: 61   PCFHPEDR--PSPTTFDEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRSRR 118

Query: 3212 FRTAKDNETAEEMEETLRRQFETEGKQVLPKEQSELSDSNIITPGTQFMCSLSKKLQQYI 3033
            FR AKD   A   E  LR +FE EG+++ PKE+S+L DSN+ITPGT FM  LS  LQ YI
Sbjct: 119  FRAAKDAAEAAAEEARLREEFEREGRRLPPKEESQLFDSNVITPGTPFMAVLSIALQYYI 178

Query: 3032 KLQMTEDTRWRSIQVILSDANVPGEGEHKIMSFIRSQRCCADYDPNTRHCLYGLDADLIM 2853
             L++  D  W++++VILSDANVPGEGEHKIMS+IR QR    ++PNTRHCLYGLDADLIM
Sbjct: 179  HLRLNYDPGWKTVKVILSDANVPGEGEHKIMSYIRLQRNLPGFNPNTRHCLYGLDADLIM 238

Query: 2852 LALATHEVHFSILREDIL--AQEETLNCVSELQRTAQQEEEDKQKSGGKQVETYNPEGPS 2679
            LALATHEVHFSILRE +    Q++   C       A  E + K+K+G             
Sbjct: 239  LALATHEVHFSILREVVFTPGQDKCFVCGQMGHVAADCEGKAKRKAG------------- 285

Query: 2678 MAEDKKVNGRAPTKKIPFQFLNVWILREYLQIDMCVDNLPEKLVGKVDLERIIDDFVFMC 2499
               D+K +G+A  +K P+QFLN+W LREYL+ +M + NLP ++    DLER++DDF+FMC
Sbjct: 286  -EFDEKGDGKAVARK-PYQFLNIWTLREYLEYEMRIPNLPFEM----DLERVVDDFIFMC 339

Query: 2498 FFVGNDFLPHMPTLAIHEGALDLLLHVYKNEFKNLGGYLIDAKRIEDKKAGYIKLKRVEK 2319
            FFVGNDFLPHMPTL I EGA++LL+  YK E ++LGGYL +  +          L RVE 
Sbjct: 340  FFVGNDFLPHMPTLEIREGAINLLMAAYKKELRSLGGYLTNGSK--------PNLSRVEH 391

Query: 2318 FILSVGVYEDKIFKKRTEMRDRKIRRI----IDAENADSQECFGAKFERDSW-------- 2175
            FI +VG YEDKIF+KR  +  R+  RI      A   D  E    + + DS         
Sbjct: 392  FIQAVGSYEDKIFQKRARLHQRQAERIKREKAQARRGDDVE---PQIQPDSLVPVARFHG 448

Query: 2174 -----------FSDCTFSNGK-ASGDTYPPGTSDGTKTSCTGIAQANADV----LKNTRE 2043
                       F     SNG  +SG  +         T    I +A   +     +N  E
Sbjct: 449  SRLASGPSPAPFQQTMESNGNGSSGQPHKVRRLSSGATIGAAIVEAEDSIETEEHENKEE 508

Query: 2042 LKQQLKEQIRQKSDTFRRCNLGVDKVKLGTPGYKERYYDEKFSTKNHGERERKRKEVVQK 1863
            LK +LKE IR KSD F   N   DK+KLG PG+KERYY+EKFS K   E E  RK+VV +
Sbjct: 509  LKAKLKELIRDKSDVFNSKNHEEDKIKLGEPGWKERYYEEKFSAKTPEEMEAIRKDVVLR 568

Query: 1862 YTEGLCWVLNYYYAGVPSWNWFYPFHYGPFASDFRGLSQVAIMFKKGLPFKPFDQLMAVL 1683
            YTEGLCWV++YYY GV SW WFYP+HY PFASD + L Q+ I F+ G PFKPF+QL+ V 
Sbjct: 569  YTEGLCWVMHYYYEGVCSWRWFYPYHYAPFASDLKDLGQLDIQFELGSPFKPFNQLLGVF 628

Query: 1682 PPQSASVLPEACKKLILDKSSPLFKFYPTDFEVDLDGKRYLWQGICKLPFIQEECLLTET 1503
            P  SA  LPE  ++L+ D +SP+  FYPTDFE+D++GKR+ WQGI KLPFI EE LL E 
Sbjct: 629  PAASAHALPEQYRELMTDPNSPIIDFYPTDFEIDMNGKRFSWQGIAKLPFIDEERLLAEV 688

Query: 1502 KLIENEFKEHEKQRNA--------DAAHRXXXXXXXXXXXXXXXXXXXXXXXXXSNVINI 1347
              IE+   E E +RN+         A+HR                             ++
Sbjct: 689  AKIEHTLTEEEARRNSIMCDMLFVAASHRLSEQIFSLDNRCRHLTEKERIEVKEEVKPDL 748

Query: 1346 KTLMSNGISGFIRLEFNGLIATDFSDKSED------PDVLCVFYELP--HDCLPKPHLLE 1191
            ++  S+G++G+I           F    +D       +V+C  Y LP  H  + +P    
Sbjct: 749  RSACSDGMNGYISPCAGDTHPPIFRSPIKDMEDILANEVICCIYRLPKAHKHITRPP--A 806

Query: 1190 GVVVPEKTISEEDLLDEPALWHEASNGFNRRP 1095
            GV  P K +   D+  EP LWHE S    RRP
Sbjct: 807  GVTFPPKMVQFSDMKPEPVLWHEDS---GRRP 835


>gb|EOY14996.1| 5'-3' exoribonuclease 3 isoform 1 [Theobroma cacao]
          Length = 1106

 Score =  710 bits (1833), Expect = 0.0
 Identities = 408/872 (46%), Positives = 516/872 (59%), Gaps = 63/872 (7%)
 Frame = -3

Query: 3521 MGVPSFYRWLVNRYPKTVVDVREN-----------------TSTDLEFDNLYLDMNGIIH 3393
            MGVP+FYRWL  +YP  ++DV E                      LEFDNLYLDMNGIIH
Sbjct: 1    MGVPAFYRWLAEKYPLVIMDVIEEEPVVIDGVSIPVDTSKPNPNKLEFDNLYLDMNGIIH 60

Query: 3392 NCFHPESDNVPAPTTFEDVFNNIYDYIDKLFDIVKPRKLLYMAIDGVAPRAKMNQQRARR 3213
             CFHPE    P+PTTF++VF  ++DYID+LF +V+PRKLL+MAIDGVAPRAKMNQQR+RR
Sbjct: 61   PCFHPEDR--PSPTTFDEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRSRR 118

Query: 3212 FRTAKDNETAEEMEETLRRQFETEGKQVLPKEQSELSDSNIITPGTQFMCSLSKKLQQYI 3033
            FR AKD   A   E  LR +FE EG+++ PKE+S+L DSN+ITPGT FM  LS  LQ YI
Sbjct: 119  FRAAKDAAEAAAEEARLREEFEREGRRLPPKEESQLFDSNVITPGTPFMAVLSIALQYYI 178

Query: 3032 KLQMTEDTRWRSIQVILSDANVPGEGEHKIMSFIRSQRCCADYDPNTRHCLYGLDADLIM 2853
             L++  D  W++++VILSDANVPGEGEHKIMS+IR QR    ++PNTRHCLYGLDADLIM
Sbjct: 179  HLRLNYDPGWKTVKVILSDANVPGEGEHKIMSYIRLQRNLPGFNPNTRHCLYGLDADLIM 238

Query: 2852 LALATHEVHFSILREDIL--AQEETLNCVSELQRTAQQEEEDKQKSGGKQVETYNPEGPS 2679
            LALATHEVHFSILRE +    Q++   C       A  E + K+K+G             
Sbjct: 239  LALATHEVHFSILREVVFTPGQDKCFVCGQMGHVAADCEGKAKRKAG------------- 285

Query: 2678 MAEDKKVNGRAPTKKIPFQFLNVWILREYLQIDMCVDNLPEKLVGKVDLERIIDDFVFMC 2499
               D+K +G+A  +K P+QFLN+W LREYL+ +M + NLP ++    DLER++DDF+FMC
Sbjct: 286  -EFDEKGDGKAVARK-PYQFLNIWTLREYLEYEMRIPNLPFEM----DLERVVDDFIFMC 339

Query: 2498 FFVGNDFLPHMPTLAIHEGALDLLLHVYKNEFKNLGGYLIDAKRIEDKKAGYIKLKRVEK 2319
            FFVGNDFLPHMPTL I EGA++LL+  YK E ++LGGYL +  +          L RVE 
Sbjct: 340  FFVGNDFLPHMPTLEIREGAINLLMAAYKKELRSLGGYLTNGSK--------PNLSRVEH 391

Query: 2318 FILSVGVYEDKIFKKRTEMRDRKIRRI----IDAENADSQECFGAKFERDSW-------- 2175
            FI +VG YEDKIF+KR  +  R+  RI      A   D  E    + + DS         
Sbjct: 392  FIQAVGSYEDKIFQKRARLHQRQAERIKREKAQARRGDDVE---PQIQPDSLVPVARFHG 448

Query: 2174 -----------FSDCTFSNGK-ASGDTYPPGTSDGTKTSCTGIAQANADV----LKNTRE 2043
                       F     SNG  +SG  +         T    I +A   +     +N  E
Sbjct: 449  SRLASGPSPAPFQQTMESNGNGSSGQPHKVRRLSSGATIGAAIVEAEDSIETEEHENKEE 508

Query: 2042 LKQQLKEQIRQKSDTFRRCNLGVDKVKLGTPGYKERYYDEKFSTKNHGERERKRKEVVQK 1863
            LK +LKE IR KSD F   N   DK+KLG PG+KERYY+EKFS K   E E  RK+VV +
Sbjct: 509  LKAKLKELIRDKSDVFNSKNHEEDKIKLGEPGWKERYYEEKFSAKTPEEMEAIRKDVVLR 568

Query: 1862 YTEGLCWVLNYYYAGVPSWNWFYPFHYGPFASDFRGLSQVAIMFKKGLPFKPFDQLMAVL 1683
            YTEGLCWV++YYY GV SW WFYP+HY PFASD + L Q+ I F+ G PFKPF+QL+ V 
Sbjct: 569  YTEGLCWVMHYYYEGVCSWRWFYPYHYAPFASDLKDLGQLDIQFELGSPFKPFNQLLGVF 628

Query: 1682 PPQSASVLPEACKKLILDKSSPLFKFYPTDFEVDLDGKRYLWQGICKLPFIQEECLLTET 1503
            P  SA  LPE  ++L+ D +SP+  FYPTDFE+D++GKR+ WQGI KLPFI EE LL E 
Sbjct: 629  PAASAHALPEQYRELMTDPNSPIIDFYPTDFEIDMNGKRFSWQGIAKLPFIDEERLLAEV 688

Query: 1502 KLIENEFKEHEKQRNA--------DAAHRXXXXXXXXXXXXXXXXXXXXXXXXXSNVINI 1347
              IE+   E E +RN+         A+HR                              +
Sbjct: 689  AKIEHTLTEEEARRNSIMCDMLFVAASHRLSEQIFSLDNRCRHLTEKERIEVKE----EV 744

Query: 1346 KTLMSNGISGFIRLEFNGLIATDFSDKSED------PDVLCVFYELP--HDCLPKPHLLE 1191
            K  +S+G++G+I           F    +D       +V+C  Y LP  H  + +P    
Sbjct: 745  KPDLSDGMNGYISPCAGDTHPPIFRSPIKDMEDILANEVICCIYRLPKAHKHITRPP--A 802

Query: 1190 GVVVPEKTISEEDLLDEPALWHEASNGFNRRP 1095
            GV  P K +   D+  EP LWHE S    RRP
Sbjct: 803  GVTFPPKMVQFSDMKPEPVLWHEDS---GRRP 831


>ref|XP_006601346.1| PREDICTED: 5'-3' exoribonuclease 3-like isoform X2 [Glycine max]
          Length = 1069

 Score =  709 bits (1831), Expect = 0.0
 Identities = 411/905 (45%), Positives = 516/905 (57%), Gaps = 75/905 (8%)
 Frame = -3

Query: 3521 MGVPSFYRWLVNRYPKTVVDVRENTST-----------------DLEFDNLYLDMNGIIH 3393
            MGVP+FYRWL  +YP  +VD  E  +                  ++E+DNLYLDMNGIIH
Sbjct: 1    MGVPAFYRWLAEKYPMVIVDAIEEEAVVIDGVQIPVDTSNKNPNNIEYDNLYLDMNGIIH 60

Query: 3392 NCFHPESDNVPAPTTFEDVFNNIYDYIDKLFDIVKPRKLLYMAIDGVAPRAKMNQQRARR 3213
             CFHPE    P+PT+F++VF  ++DYID+LF +V+PRKLLYMAIDGVAPRAKMNQQR+RR
Sbjct: 61   PCFHPEDR--PSPTSFDEVFECMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118

Query: 3212 FRTAKDNETAEEMEETLRRQFETEGKQVLPKEQSELSDSNIITPGTQFMCSLSKKLQQYI 3033
            FR AKD   A   E  LR +FE EG+++ PK +S+  DSN+ITPGT+FM  LS  LQ Y+
Sbjct: 119  FRAAKDAADAAAEETRLREEFEKEGRKLPPKGESQTFDSNVITPGTEFMAVLSIALQYYV 178

Query: 3032 KLQMTEDTRWRSIQVILSDANVPGEGEHKIMSFIRSQRCCADYDPNTRHCLYGLDADLIM 2853
             L++  D  W++I+VILSDANVPGEGEHKIMS+IR QR    YDPNTRHCLYGLDADLIM
Sbjct: 179  HLRLNNDPGWQNIKVILSDANVPGEGEHKIMSYIRLQRNLKGYDPNTRHCLYGLDADLIM 238

Query: 2852 LALATHEVHFSILREDIL--AQEETLNCVSELQRTAQQEEEDKQKSGGKQVETYNPEGPS 2679
            LALATHE+HFSILRE +    Q++   C       A  E + K+K+G             
Sbjct: 239  LALATHEIHFSILREVVFTPGQDKCFLCGQMGHMAANCEGKAKRKAG------------- 285

Query: 2678 MAEDKKVNGRAPTKKIPFQFLNVWILREYLQIDMCVDNLPEKLVGKVDLERIIDDFVFMC 2499
               D+K  G A   K PFQFLN+W LREYL+ +M + N P     ++D E I+DDF+FMC
Sbjct: 286  -EFDEK--GEAIVAKKPFQFLNIWTLREYLEYEMRIPNPP----FEIDFECIVDDFIFMC 338

Query: 2498 FFVGNDFLPHMPTLAIHEGALDLLLHVYKNEFKNLGGYLIDAKRIEDKKAGYIKLKRVEK 2319
            FFVGNDFLPHMPTL I EGA++LL+ VYK EF+  GGYL +           I L +VE 
Sbjct: 339  FFVGNDFLPHMPTLEIREGAINLLIAVYKKEFREFGGYLTNGST--------INLSKVEH 390

Query: 2318 FILSVGVYEDKIFKKRTEMRDRKIRRI----IDAENADSQECFGAKFERDSWFSDCTF-- 2157
            FI +VG YEDKIF+KR  +  R+  RI      A   D  E    +F+ +S  +   F  
Sbjct: 391  FIQAVGSYEDKIFQKRARLHQRQTERIKREKAQARRGDDAE---PQFKPESLVAVSRFHG 447

Query: 2156 ----------------------------SNGKASGDTYPPGTSDGTKTSCTGIAQA---- 2073
                                         N +A    Y         T    I +A    
Sbjct: 448  SRLASAPNPSPFQPSGHYNSQVSASVRKDNKEAFERPYKVARVSSGATVAAAIVEAENNL 507

Query: 2072 NADVLKNTRELKQQLKEQIRQKSDTFRRCNLGVDKVKLGTPGYKERYYDEKFSTKNHGER 1893
              D   N  ELK +LKE +R+KSD F   N   DK+KLG PG+KERYYDEKFS K   E 
Sbjct: 508  EIDAQDNKDELKTKLKEILREKSDVFNSKNAEEDKIKLGEPGWKERYYDEKFSAKTPEEL 567

Query: 1892 ERKRKEVVQKYTEGLCWVLNYYYAGVPSWNWFYPFHYGPFASDFRGLSQVAIMFKKGLPF 1713
            E  RK+VV KYTEGLCWV++YYY GV SWNWFYP+HY PFASD +GL ++ I FK G PF
Sbjct: 568  EAIRKDVVLKYTEGLCWVMHYYYEGVCSWNWFYPYHYAPFASDLKGLGELDISFKLGTPF 627

Query: 1712 KPFDQLMAVLPPQSASVLPEACKKLILDKSSPLFKFYPTDFEVDLDGKRYLWQGICKLPF 1533
            KP+DQL+ V P  S+  LPE  ++L+ D SSP+  FYP DFEVD++GKR+ WQGI KLPF
Sbjct: 628  KPYDQLLGVFPAASSHALPEPYRRLMTDPSSPIIDFYPVDFEVDMNGKRFAWQGIAKLPF 687

Query: 1532 IQEECLLTETKLIENEFKEHEKQRNA--------DAAHRXXXXXXXXXXXXXXXXXXXXX 1377
            I E  LL E + IEN     EK+RNA        ++ H                      
Sbjct: 688  IDEVRLLAEVQKIENLLTPEEKRRNAIMFDLLFVNSCHPLSACISTLDNKCKNMPNSERA 747

Query: 1376 XXXXSNVINIKTLMSNGISGFIRL--------EFNGLIATDFSDKSEDPDVLCVFYELP- 1224
                      +   S G++G+I L         F   +A+   +   D  V+C  Y LP 
Sbjct: 748  VVKEKINPKERDTCSGGMNGYISLCGGEPCPPIFRSPVAS--MEDIMDNHVICAIYRLPD 805

Query: 1223 -HDCLPKPHLLEGVVVPEKTISEEDLLDEPALWHEASNGFNRRPLNQFQKLKSCKKNEEP 1047
             H  + +P   +GV  P+K +  EDL  EP LWHE S   +     +     S    E  
Sbjct: 806  AHTHITRPP--QGVKFPKKIVGIEDLKPEPVLWHEDSGRRHHAENGRKNPPGSISGRELG 863

Query: 1046 DIMHR 1032
            D  HR
Sbjct: 864  DAAHR 868


>ref|XP_003549459.1| PREDICTED: 5'-3' exoribonuclease 3-like isoform X1 [Glycine max]
          Length = 1065

 Score =  709 bits (1830), Expect = 0.0
 Identities = 414/905 (45%), Positives = 518/905 (57%), Gaps = 75/905 (8%)
 Frame = -3

Query: 3521 MGVPSFYRWLVNRYPKTVVDVRENTST-----------------DLEFDNLYLDMNGIIH 3393
            MGVP+FYRWL  +YP  +VD  E  +                  ++E+DNLYLDMNGIIH
Sbjct: 1    MGVPAFYRWLAEKYPMVIVDAIEEEAVVIDGVQIPVDTSNKNPNNIEYDNLYLDMNGIIH 60

Query: 3392 NCFHPESDNVPAPTTFEDVFNNIYDYIDKLFDIVKPRKLLYMAIDGVAPRAKMNQQRARR 3213
             CFHPE    P+PT+F++VF  ++DYID+LF +V+PRKLLYMAIDGVAPRAKMNQQR+RR
Sbjct: 61   PCFHPEDR--PSPTSFDEVFECMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118

Query: 3212 FRTAKDNETAEEMEETLRRQFETEGKQVLPKEQSELSDSNIITPGTQFMCSLSKKLQQYI 3033
            FR AKD   A   E  LR +FE EG+++ PK +S+  DSN+ITPGT+FM  LS  LQ Y+
Sbjct: 119  FRAAKDAADAAAEETRLREEFEKEGRKLPPKGESQTFDSNVITPGTEFMAVLSIALQYYV 178

Query: 3032 KLQMTEDTRWRSIQVILSDANVPGEGEHKIMSFIRSQRCCADYDPNTRHCLYGLDADLIM 2853
             L++  D  W++I+VILSDANVPGEGEHKIMS+IR QR    YDPNTRHCLYGLDADLIM
Sbjct: 179  HLRLNNDPGWQNIKVILSDANVPGEGEHKIMSYIRLQRNLKGYDPNTRHCLYGLDADLIM 238

Query: 2852 LALATHEVHFSILREDIL--AQEETLNCVSELQRTAQQEEEDKQKSGGKQVETYNPEGPS 2679
            LALATHE+HFSILRE +    Q++   C       A  E + K+K+G             
Sbjct: 239  LALATHEIHFSILREVVFTPGQDKCFLCGQMGHMAANCEGKAKRKAG------------- 285

Query: 2678 MAEDKKVNGRAPTKKIPFQFLNVWILREYLQIDMCVDNLPEKLVGKVDLERIIDDFVFMC 2499
               D+K  G A   K PFQFLN+W LREYL+ +M + N P     ++D E I+DDF+FMC
Sbjct: 286  -EFDEK--GEAIVAKKPFQFLNIWTLREYLEYEMRIPNPP----FEIDFECIVDDFIFMC 338

Query: 2498 FFVGNDFLPHMPTLAIHEGALDLLLHVYKNEFKNLGGYLIDAKRIEDKKAGYIKLKRVEK 2319
            FFVGNDFLPHMPTL I EGA++LL+ VYK EF+  GGYL +           I L +VE 
Sbjct: 339  FFVGNDFLPHMPTLEIREGAINLLIAVYKKEFREFGGYLTNGST--------INLSKVEH 390

Query: 2318 FILSVGVYEDKIFKKRTEMRDRKIRRI----IDAENADSQECFGAKFERDSWFSDCTF-- 2157
            FI +VG YEDKIF+KR  +  R+  RI      A   D  E    +F+ +S  +   F  
Sbjct: 391  FIQAVGSYEDKIFQKRARLHQRQTERIKREKAQARRGDDAE---PQFKPESLVAVSRFHG 447

Query: 2156 ----------------------------SNGKASGDTYPPGTSDGTKTSCTGIAQA---- 2073
                                         N +A    Y         T    I +A    
Sbjct: 448  SRLASAPNPSPFQPSGHYNSQVSASVRKDNKEAFERPYKVARVSSGATVAAAIVEAENNL 507

Query: 2072 NADVLKNTRELKQQLKEQIRQKSDTFRRCNLGVDKVKLGTPGYKERYYDEKFSTKNHGER 1893
              D   N  ELK +LKE +R+KSD F   N   DK+KLG PG+KERYYDEKFS K   E 
Sbjct: 508  EIDAQDNKDELKTKLKEILREKSDVFNSKNAEEDKIKLGEPGWKERYYDEKFSAKTPEEL 567

Query: 1892 ERKRKEVVQKYTEGLCWVLNYYYAGVPSWNWFYPFHYGPFASDFRGLSQVAIMFKKGLPF 1713
            E  RK+VV KYTEGLCWV++YYY GV SWNWFYP+HY PFASD +GL ++ I FK G PF
Sbjct: 568  EAIRKDVVLKYTEGLCWVMHYYYEGVCSWNWFYPYHYAPFASDLKGLGELDISFKLGTPF 627

Query: 1712 KPFDQLMAVLPPQSASVLPEACKKLILDKSSPLFKFYPTDFEVDLDGKRYLWQGICKLPF 1533
            KP+DQL+ V P  S+  LPE  ++L+ D SSP+  FYP DFEVD++GKR+ WQGI KLPF
Sbjct: 628  KPYDQLLGVFPAASSHALPEPYRRLMTDPSSPIIDFYPVDFEVDMNGKRFAWQGIAKLPF 687

Query: 1532 IQEECLLTETKLIENEFKEHEKQRNA--------DAAHRXXXXXXXXXXXXXXXXXXXXX 1377
            I E  LL E + IEN     EK+RNA        ++ H                      
Sbjct: 688  IDEVRLLAEVQKIENLLTPEEKRRNAIMFDLLFVNSCH--PLSACISTLDNKCKNMPNSE 745

Query: 1376 XXXXSNVINIKTLMSNGISGFIRL--------EFNGLIATDFSDKSEDPDVLCVFYELP- 1224
                   IN K   S G++G+I L         F   +A+   +   D  V+C  Y LP 
Sbjct: 746  RAVVKEKINPKE--SGGMNGYISLCGGEPCPPIFRSPVAS--MEDIMDNHVICAIYRLPD 801

Query: 1223 -HDCLPKPHLLEGVVVPEKTISEEDLLDEPALWHEASNGFNRRPLNQFQKLKSCKKNEEP 1047
             H  + +P   +GV  P+K +  EDL  EP LWHE S   +     +     S    E  
Sbjct: 802  AHTHITRPP--QGVKFPKKIVGIEDLKPEPVLWHEDSGRRHHAENGRKNPPGSISGRELG 859

Query: 1046 DIMHR 1032
            D  HR
Sbjct: 860  DAAHR 864


>ref|XP_002306919.2| EXORIBONUCLEASE 2 family protein [Populus trichocarpa]
            gi|550339757|gb|EEE93915.2| EXORIBONUCLEASE 2 family
            protein [Populus trichocarpa]
          Length = 1052

 Score =  707 bits (1826), Expect = 0.0
 Identities = 405/871 (46%), Positives = 516/871 (59%), Gaps = 62/871 (7%)
 Frame = -3

Query: 3521 MGVPSFYRWLVNRYPKTVVDVREN-----------------TSTDLEFDNLYLDMNGIIH 3393
            MGVP+FYRWL  +YP  VVDV E                     ++E+DNLYLDMNGIIH
Sbjct: 1    MGVPAFYRWLAEKYPLVVVDVIEEEPVVIEGVKIPVDTSKPNPNNIEYDNLYLDMNGIIH 60

Query: 3392 NCFHPESDNVPAPTTFEDVFNNIYDYIDKLFDIVKPRKLLYMAIDGVAPRAKMNQQRARR 3213
             CFHPE    P+PT+F +VF  ++DYID+LF +V+PRKLLYMAIDGVAPRAKMNQQR+RR
Sbjct: 61   PCFHPEDR--PSPTSFGEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118

Query: 3212 FRTAKDNETAEEMEETLRRQFETEGKQVLPKEQSELSDSNIITPGTQFMCSLSKKLQQYI 3033
            FR AKD   A   EE LR +FE EG+++ PKE S+  DSN+ITPGT+FM  LS  LQ YI
Sbjct: 119  FRAAKDASDAAAEEERLREEFEREGRKLPPKETSQTFDSNVITPGTEFMAVLSIALQYYI 178

Query: 3032 KLQMTEDTRWRSIQVILSDANVPGEGEHKIMSFIRSQRCCADYDPNTRHCLYGLDADLIM 2853
             L++  D  W+ I+V+LSDANVPGEGEHK+MS+IR QR    YDPNTRHCLYGLDADLIM
Sbjct: 179  HLRLNYDPGWKKIKVVLSDANVPGEGEHKVMSYIRLQRNLPGYDPNTRHCLYGLDADLIM 238

Query: 2852 LALATHEVHFSILREDILA---QEETLNCVSELQRTAQQEEEDKQKSGGKQVETYNPEGP 2682
            LALATHEVHFSILRE +     Q++   C       A  E + K+K+G      ++ +G 
Sbjct: 239  LALATHEVHFSILREIVFTPGQQDKCFICGQAGHLAAACEGKAKRKAG-----EFDEKGN 293

Query: 2681 SMAEDKKVNGRAPTKKIPFQFLNVWILREYLQIDMCVDNLPEKLVGKVDLERIIDDFVFM 2502
             +A  KK          P+QFLN+W LREYL+ +  + N P     ++DLER +DDF+F+
Sbjct: 294  DVAVPKK----------PYQFLNIWTLREYLEYEFRIPNPP----FEIDLERTVDDFIFI 339

Query: 2501 CFFVGNDFLPHMPTLAIHEGALDLLLHVYKNEFKNLGGYLIDAKRIEDKKAGYIKLKRVE 2322
            CFFVGNDFLPHMPTL I EGA++LL+ VYK EF+ LGGYL D  +          L RVE
Sbjct: 340  CFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRVLGGYLTDGSK--------PNLSRVE 391

Query: 2321 KFILSVGVYEDKIFKKRTEMRDRKIRRI-IDAENADSQECFGAKFERDSWFSDCTFSNGK 2145
             FI +VG YEDKIF+KR  +  R+  RI  +   A   +    + + +S  +   F   +
Sbjct: 392  HFIQAVGAYEDKIFQKRARLHQRQAERIKREKTQARRGDDVQPQHQPESLVAVTQFRGSR 451

Query: 2144 -ASGDTYPPGTSDGT---------------------KTSCTGIAQANA------DVLKNT 2049
             AS  T  P   DGT                      T+  G A   A      +  +N 
Sbjct: 452  LASAPTPSPYQDDGTHSQTSDGKGSSVQSRKVARLSSTANIGAAIVEAENCLEIEAHENK 511

Query: 2048 RELKQQLKEQIRQKSDTFRRCNLGVDKVKLGTPGYKERYYDEKFSTKNHGERERKRKEVV 1869
             ELK +LKE +R+KSD F   N   DKVKLG PG+KERYY+EKFS K+  E E  R++VV
Sbjct: 512  EELKTKLKESLREKSDVFNSKNHEEDKVKLGEPGWKERYYEEKFSAKSLDEMEAVRRDVV 571

Query: 1868 QKYTEGLCWVLNYYYAGVPSWNWFYPFHYGPFASDFRGLSQVAIMFKKGLPFKPFDQLMA 1689
             +YTEGLCWV++YYY GV SW WFYP+HY PFASD   L Q+ I F+ G PFKPF+QL+ 
Sbjct: 572  LRYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLTDLGQLNISFELGSPFKPFNQLLG 631

Query: 1688 VLPPQSASVLPEACKKLILDKSSPLFKFYPTDFEVDLDGKRYLWQGICKLPFIQEECLLT 1509
            V P  S+  LP   +KL+ D +SP+F FYPTDFEVD++GKR+ WQGI KLPFI E  LL 
Sbjct: 632  VFPAASSHALPVHYRKLMTDPNSPIFDFYPTDFEVDMNGKRFAWQGIAKLPFIDEARLLA 691

Query: 1508 ETKLIENEFKEHEKQRNADAAHRXXXXXXXXXXXXXXXXXXXXXXXXXSNVINIKTL--- 1338
            E + IE+   E E +RN+                                 + +K     
Sbjct: 692  EVQKIEHTLTEEEARRNSMMFDMLFVSSSHPLSESIYLLDNHCKQLTDKERVEVKERINP 751

Query: 1337 -MSNGISGFIRLEFNGLIATDFSDK---SED---PDVLCVFYELPHDCLPKPHLL---EG 1188
             +S+G++G++           F       ED    +V+CV Y LP    P  H+     G
Sbjct: 752  ELSDGMNGYLSPCAGDTHPPIFRSPVVGMEDILANEVICVIYRLPD---PHKHITYPPVG 808

Query: 1187 VVVPEKTISEEDLLDEPALWHEASNGFNRRP 1095
            V+ P+K + + DL  +P LWHE S    RRP
Sbjct: 809  VIFPKKIVDQGDLKPDPVLWHEES---GRRP 836


>gb|EAY76660.1| hypothetical protein OsI_04616 [Oryza sativa Indica Group]
          Length = 1068

 Score =  707 bits (1826), Expect = 0.0
 Identities = 405/873 (46%), Positives = 512/873 (58%), Gaps = 64/873 (7%)
 Frame = -3

Query: 3521 MGVPSFYRWLVNRYPKTVVDVRENTSTD-----------------LEFDNLYLDMNGIIH 3393
            MGVP+FYRWL  +YP  VVDV E  + +                 LEFDNLYLDMNGIIH
Sbjct: 1    MGVPAFYRWLAEKYPMVVVDVVEEEAVEIEGVKVPVDTSKPNPNGLEFDNLYLDMNGIIH 60

Query: 3392 NCFHPESDNVPAPTTFEDVFNNIYDYIDKLFDIVKPRKLLYMAIDGVAPRAKMNQQRARR 3213
             CFHPE    P+PTTF +VF  ++DYID+LF +V+PRKL+YMAIDGVAPRAKMNQQR+RR
Sbjct: 61   PCFHPEDR--PSPTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRR 118

Query: 3212 FRTAKDNETAEEMEETLRRQFETEGKQVLPKEQSELSDSNIITPGTQFMCSLSKKLQQYI 3033
            FR AKD   A   EE LR +FE EG+++ PK+QS+  DSN+ITPGT+FM  LS  LQ YI
Sbjct: 119  FRAAKDAADAAAEEERLREEFEREGRKLPPKQQSQTCDSNVITPGTEFMAVLSIALQYYI 178

Query: 3032 KLQMTEDTRWRSIQVILSDANVPGEGEHKIMSFIRSQRCCADYDPNTRHCLYGLDADLIM 2853
             L++  D  W+ ++VILSDANVPGEGEHKIMS+IR QR    ++PNTRHCLYGLDADLIM
Sbjct: 179  HLRLNYDPGWKQVKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIM 238

Query: 2852 LALATHEVHFSILREDILA---QEETLNCVSELQRTAQQEEEDKQKSGGKQVETYNPEGP 2682
            LALATHEVHFSILRE +     Q++   C       A  E + K+K+G            
Sbjct: 239  LALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAG------------ 286

Query: 2681 SMAEDKKVNGRAPTKKIPFQFLNVWILREYLQIDMCVDNLPEKLVGKVDLERIIDDFVFM 2502
                D+K  G A   K P+QFLN+W LREYL+ +  + N P      +D ERI+DDF+FM
Sbjct: 287  --EFDEK--GEAIVPKKPYQFLNIWTLREYLEYEFRMQNPP----FPIDFERIVDDFIFM 338

Query: 2501 CFFVGNDFLPHMPTLAIHEGALDLLLHVYKNEFKNLGGYLIDAKRIEDKKAGYIKLKRVE 2322
            CFFVGNDFLPHMPTL I EGA++LL+ VYK EF ++GGYL DA   +        L +VE
Sbjct: 339  CFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFPSMGGYLTDACTPD--------LNKVE 390

Query: 2321 KFILSVGVYEDKIFKKRTEMRDRKIRRI------------IDAENADSQECFGAKFERDS 2178
             FI +VG YEDKIF+KR  +  R+  RI            +D    D      A+F+   
Sbjct: 391  HFIQAVGSYEDKIFQKRARLHQRQAERIKREKAQAKRGDDLDPHVRDDLIVPVARFQGSR 450

Query: 2177 WFSDCTFS-----------NGKASGDTYPPGTSDGTKTSCTGIAQANADV----LKNTRE 2043
              S    S            GK S        S    +    I +A  D+     +N  +
Sbjct: 451  LASGPAPSPYEQNGSDKNNGGKNSRARKAARVSSSGSSIAAAIVEAENDLEAQERENKED 510

Query: 2042 LKQQLKEQIRQKSDTFRRCNLGVDKVKLGTPGYKERYYDEKFSTKNHGERERKRKEVVQK 1863
            LK  LK+ +R+KSD F   N   DK+KLG PG++ERYY+EKF  +  G+ E  R++VV K
Sbjct: 511  LKTMLKDALREKSDVFNSENPEEDKIKLGEPGWRERYYEEKFGARTPGQIEEIRRDVVLK 570

Query: 1862 YTEGLCWVLNYYYAGVPSWNWFYPFHYGPFASDFRGLSQVAIMFKKGLPFKPFDQLMAVL 1683
            YTEGLCWV++YYY GV SW WFYP+HY PFASD  GL Q+ I F+ G PFKPFDQLM V 
Sbjct: 571  YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLSGLGQLNITFELGSPFKPFDQLMGVF 630

Query: 1682 PPQSASVLPEACKKLILDKSSPLFKFYPTDFEVDLDGKRYLWQGICKLPFIQEECLLTET 1503
            P  S+  LP   ++L+ D +SP+  FYPTDFEVD++GKRY WQGI KLPFI E  LL E 
Sbjct: 631  PAASSHALPVQYRQLMTDANSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEI 690

Query: 1502 KLIENEFKEHEKQRNADAAHRXXXXXXXXXXXXXXXXXXXXXXXXXSNVINIKTLM---- 1335
            K +E+     E +RN+   +                               IK  +    
Sbjct: 691  KKVEHTLTPEEARRNSIMFNMLFVNGSHPLSPYIYSLNSKFGHLPDRERNEIKEKIDPSS 750

Query: 1334 SNGISGFIRLEFNGLIATDFSDKSE------DPDVLCVFYELP--HDCLPKPHLLEGVVV 1179
            S G++G+I L         F    +      D  V+C  Y+LP  H  + +P +  GV++
Sbjct: 751  SGGMNGYISLCSGDPCPPVFRSPVDGLEDIMDNQVICTIYKLPDSHKHIARPPV--GVII 808

Query: 1178 PEKTISEEDLLDEPALWHEAS-----NGFNRRP 1095
            P+KT+   DL   P LWHE S     +  NRRP
Sbjct: 809  PKKTVEATDLKPPPVLWHEDSGRRPHDNNNRRP 841


>ref|NP_001044947.1| Os01g0872700 [Oryza sativa Japonica Group]
            gi|56785082|dbj|BAD82721.1| putative 5'-3'
            exoribonuclease (XRN3) [Oryza sativa Japonica Group]
            gi|113534478|dbj|BAF06861.1| Os01g0872700 [Oryza sativa
            Japonica Group] gi|215713440|dbj|BAG94577.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 1068

 Score =  707 bits (1826), Expect = 0.0
 Identities = 405/873 (46%), Positives = 512/873 (58%), Gaps = 64/873 (7%)
 Frame = -3

Query: 3521 MGVPSFYRWLVNRYPKTVVDVRENTSTD-----------------LEFDNLYLDMNGIIH 3393
            MGVP+FYRWL  +YP  VVDV E  + +                 LEFDNLYLDMNGIIH
Sbjct: 1    MGVPAFYRWLAEKYPMVVVDVVEEEAVEIEGVKVPVDTSKPNPNGLEFDNLYLDMNGIIH 60

Query: 3392 NCFHPESDNVPAPTTFEDVFNNIYDYIDKLFDIVKPRKLLYMAIDGVAPRAKMNQQRARR 3213
             CFHPE    P+PTTF +VF  ++DYID+LF +V+PRKL+YMAIDGVAPRAKMNQQR+RR
Sbjct: 61   PCFHPEDR--PSPTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRR 118

Query: 3212 FRTAKDNETAEEMEETLRRQFETEGKQVLPKEQSELSDSNIITPGTQFMCSLSKKLQQYI 3033
            FR AKD   A   EE LR +FE EG+++ PK+QS+  DSN+ITPGT+FM  LS  LQ YI
Sbjct: 119  FRAAKDAADAAAEEERLREEFEREGRKLPPKQQSQTCDSNVITPGTEFMAVLSIALQYYI 178

Query: 3032 KLQMTEDTRWRSIQVILSDANVPGEGEHKIMSFIRSQRCCADYDPNTRHCLYGLDADLIM 2853
             L++  D  W+ ++VILSDANVPGEGEHKIMS+IR QR    ++PNTRHCLYGLDADLIM
Sbjct: 179  HLRLNYDPGWKQVKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIM 238

Query: 2852 LALATHEVHFSILREDILA---QEETLNCVSELQRTAQQEEEDKQKSGGKQVETYNPEGP 2682
            LALATHEVHFSILRE +     Q++   C       A  E + K+K+G            
Sbjct: 239  LALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAG------------ 286

Query: 2681 SMAEDKKVNGRAPTKKIPFQFLNVWILREYLQIDMCVDNLPEKLVGKVDLERIIDDFVFM 2502
                D+K  G A   K P+QFLN+W LREYL+ +  + N P      +D ERI+DDF+FM
Sbjct: 287  --EFDEK--GEAIVPKKPYQFLNIWTLREYLEYEFRMQNPP----FPIDFERIVDDFIFM 338

Query: 2501 CFFVGNDFLPHMPTLAIHEGALDLLLHVYKNEFKNLGGYLIDAKRIEDKKAGYIKLKRVE 2322
            CFFVGNDFLPHMPTL I EGA++LL+ VYK EF ++GGYL DA   +        L +VE
Sbjct: 339  CFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFPSMGGYLTDACTPD--------LNKVE 390

Query: 2321 KFILSVGVYEDKIFKKRTEMRDRKIRRI------------IDAENADSQECFGAKFERDS 2178
             FI +VG YEDKIF+KR  +  R+  RI            +D    D      A+F+   
Sbjct: 391  HFIQAVGSYEDKIFQKRARLHQRQAERIKREKAQAKRGDDLDPHVRDDLIVPVARFQGSR 450

Query: 2177 WFSDCTFS-----------NGKASGDTYPPGTSDGTKTSCTGIAQANADV----LKNTRE 2043
              S    S            GK S        S    +    I +A  D+     +N  +
Sbjct: 451  LASGPVPSPYEQNGSDKNNGGKNSRARKAARVSSSGSSIAAAIVEAENDLEAQERENKED 510

Query: 2042 LKQQLKEQIRQKSDTFRRCNLGVDKVKLGTPGYKERYYDEKFSTKNHGERERKRKEVVQK 1863
            LK  LK+ +R+KSD F   N   DK+KLG PG++ERYY+EKF  +  G+ E  R++VV K
Sbjct: 511  LKTMLKDALREKSDVFNSENPEEDKIKLGEPGWRERYYEEKFGARTPGQIEEIRRDVVLK 570

Query: 1862 YTEGLCWVLNYYYAGVPSWNWFYPFHYGPFASDFRGLSQVAIMFKKGLPFKPFDQLMAVL 1683
            YTEGLCWV++YYY GV SW WFYP+HY PFASD  GL Q+ I F+ G PFKPFDQLM V 
Sbjct: 571  YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLSGLGQLNITFELGSPFKPFDQLMGVF 630

Query: 1682 PPQSASVLPEACKKLILDKSSPLFKFYPTDFEVDLDGKRYLWQGICKLPFIQEECLLTET 1503
            P  S+  LP   ++L+ D +SP+  FYPTDFEVD++GKRY WQGI KLPFI E  LL E 
Sbjct: 631  PAASSHALPVQYRQLMTDANSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEI 690

Query: 1502 KLIENEFKEHEKQRNADAAHRXXXXXXXXXXXXXXXXXXXXXXXXXSNVINIKTLM---- 1335
            K +E+     E +RN+   +                               IK  +    
Sbjct: 691  KKVEHTLTPEEARRNSIMFNMLFVNGSHPLSPYIYSLNSKFGHLPDRERNEIKEKIDPSS 750

Query: 1334 SNGISGFIRLEFNGLIATDFSDKSE------DPDVLCVFYELP--HDCLPKPHLLEGVVV 1179
            S G++G+I L         F    +      D  V+C  Y+LP  H  + +P +  GV++
Sbjct: 751  SGGMNGYISLCSGDPCPPVFRSPVDGLEDIMDNQVICTIYKLPDSHKHIARPPV--GVII 808

Query: 1178 PEKTISEEDLLDEPALWHEAS-----NGFNRRP 1095
            P+KT+   DL   P LWHE S     +  NRRP
Sbjct: 809  PKKTVEATDLKPPPVLWHEDSGRRPHDNNNRRP 841


>ref|XP_006300301.1| hypothetical protein CARUB_v10019710mg [Capsella rubella]
            gi|482569011|gb|EOA33199.1| hypothetical protein
            CARUB_v10019710mg [Capsella rubella]
          Length = 1024

 Score =  707 bits (1824), Expect = 0.0
 Identities = 409/867 (47%), Positives = 524/867 (60%), Gaps = 56/867 (6%)
 Frame = -3

Query: 3521 MGVPSFYRWLVNRYPKTVVDVRENTSTD-----------------LEFDNLYLDMNGIIH 3393
            MGVPSFYRWL  +YP  V DV E    +                 LE+DNLYLDMNGIIH
Sbjct: 1    MGVPSFYRWLAEKYPLLVADVIEEEPVEIEGIKIPVDTSKPNPNGLEYDNLYLDMNGIIH 60

Query: 3392 NCFHPESDNVPAPTTFEDVFNNIYDYIDKLFDIVKPRKLLYMAIDGVAPRAKMNQQRARR 3213
             CFHPE    P+PTTFE+VF  ++DYID+LF +V+PRKLLYMAIDGVAPRAKMNQQR+RR
Sbjct: 61   PCFHPEDR--PSPTTFEEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118

Query: 3212 FRTAKDNETAEEMEETLRRQFETEGKQVLPKEQSELSDSNIITPGTQFMCSLSKKLQQYI 3033
            FR+AKD   A   EE LR +FE EG+++ PK  S++ DSN+ITPGT+FM  LS  LQ Y+
Sbjct: 119  FRSAKDASDAAAEEERLREEFEREGRRLPPKVDSQVFDSNVITPGTEFMGVLSIALQYYV 178

Query: 3032 KLQMTEDTRWRSIQVILSDANVPGEGEHKIMSFIRSQRCCADYDPNTRHCLYGLDADLIM 2853
             L++  D  W++I+VILSDANVPGEGEHKIMS+IR QR    +DPNTRHCLYGLDADLIM
Sbjct: 179  HLRLNHDVGWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 238

Query: 2852 LALATHEVHFSILREDILA---QEETLNCVSELQRTAQQEEEDKQKSGGKQVETYNPEGP 2682
            L LATHEVHFSILRE +     Q++   C       A  E + K+++G            
Sbjct: 239  LGLATHEVHFSILREVVYTPGQQDKCFLCGQMGHMAANCEGKAKKRAG------------ 286

Query: 2681 SMAEDKKVNGRAPTKKIPFQFLNVWILREYLQIDMCVDNLPEKLVGKVDLERIIDDFVFM 2502
                D+K +G    KK P+QFL++WILREYL+ +M + N P     ++DLERI+DDF+F+
Sbjct: 287  --EFDEKGDGNDFVKK-PYQFLHIWILREYLEFEMRIPNPP----FEIDLERIVDDFIFI 339

Query: 2501 CFFVGNDFLPHMPTLAIHEGALDLLLHVYKNEFKNLGGYLIDAKRIEDKKAGYIKLKRVE 2322
            CFFVGNDFLPHMPTL I EGA++LL+ VYK EF++L GYL D  +          LKRVE
Sbjct: 340  CFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRSLDGYLTDGCK--------PNLKRVE 391

Query: 2321 KFILSVGVYEDKIFKKRTEMRDRKIRRI-IDAENADSQECFGAKFERDSWFSDCTFSNGK 2145
            +FI +VG YEDKIF+KR  +  R+  R+  D       +      + DS      FS  +
Sbjct: 392  QFIQAVGSYEDKIFQKRARLHQRQAERVKRDKAQTRRMDDAAPTVQPDSLVPVARFSGSR 451

Query: 2144 -ASGDTYPP-GTSDG-----------TKTSCTGIA------QANADVLKNTRELKQQLKE 2022
             AS  T  P  ++DG           +  S  G A         +D  +N  ELK +LKE
Sbjct: 452  LASAPTPSPFQSNDGMSARHQKVRRVSSGSSVGAAIVDVENSLESDEHENKEELKTKLKE 511

Query: 2021 QIRQKSDTFRRCNLGVDKVKLGTPGYKERYYDEKFSTKNHGERERKRKEVVQKYTEGLCW 1842
             IR+KSD F       DKVKLG PG++ERYY+EKFS     E ER RK+VV KYTEGLCW
Sbjct: 512  LIREKSDAFNSDTTEEDKVKLGEPGWRERYYEEKFSVVTPEEMERVRKDVVLKYTEGLCW 571

Query: 1841 VLNYYYAGVPSWNWFYPFHYGPFASDFRGLSQVAIMFKKGLPFKPFDQLMAVLPPQSASV 1662
            V++YY  GV SW WFYP+HY PFASD + L ++ I F+ G PFKPF+QL+ V P  SA  
Sbjct: 572  VMHYYMEGVCSWQWFYPYHYAPFASDLKDLGELDIKFELGTPFKPFNQLLGVFPAASAHA 631

Query: 1661 LPEACKKLILDKSSPLFKFYPTDFEVDLDGKRYLWQGICKLPFIQEECLLTETKLIENEF 1482
            LPE  + L+ D +SP+  FYPTDFEVD++GKR+ WQGI KLPFI E+ LL     +E   
Sbjct: 632  LPERYRTLMTDPNSPIIDFYPTDFEVDMNGKRFSWQGIAKLPFIDEKRLLEAVSEVEFTL 691

Query: 1481 KEHEKQRNA--------DAAHRXXXXXXXXXXXXXXXXXXXXXXXXXSNVINIKTLMSNG 1326
             + EK+RN+          +HR                            + IK  +S+G
Sbjct: 692  TDEEKRRNSRMCDMLFIATSHRLAELIFSLDNHCRQLSYRERVDFK----VKIKPELSDG 747

Query: 1325 ISGFIRL---EFNGLIATDFSDKSED---PDVLCVFYELP--HDCLPKPHLLEGVVVPEK 1170
            ++G++     E +  +     +  ED     V+C  Y LP  H+ + +P    GV+ P+K
Sbjct: 748  MNGYLTPCSGETHPPVFRSPMEGMEDILTNQVICCIYRLPDAHEHITRPP--PGVIFPKK 805

Query: 1169 TISEEDLLDEPALWHEASNGFNRRPLN 1089
             +   DL   PALWHE  NG  RRP++
Sbjct: 806  IVDIGDLKPPPALWHE-DNG--RRPMH 829


>ref|XP_006596562.1| PREDICTED: 5'-3' exoribonuclease 3-like isoform X2 [Glycine max]
          Length = 1079

 Score =  706 bits (1822), Expect = 0.0
 Identities = 411/905 (45%), Positives = 516/905 (57%), Gaps = 75/905 (8%)
 Frame = -3

Query: 3521 MGVPSFYRWLVNRYPKTVVDVREN-----------------TSTDLEFDNLYLDMNGIIH 3393
            MGVP+FYRWL  +YP  +VD  E                     ++E+DNLYLDMNGIIH
Sbjct: 1    MGVPAFYRWLAEKYPMVIVDAIEEEPVVIDGVQIPVDTSKKNPNNIEYDNLYLDMNGIIH 60

Query: 3392 NCFHPESDNVPAPTTFEDVFNNIYDYIDKLFDIVKPRKLLYMAIDGVAPRAKMNQQRARR 3213
             CFHPE    P+PT+F++VF  ++DYID+LF +V+PR+LLYMAIDGVAPRAKMNQQR+RR
Sbjct: 61   PCFHPEDR--PSPTSFDEVFECMFDYIDRLFIMVRPRELLYMAIDGVAPRAKMNQQRSRR 118

Query: 3212 FRTAKDNETAEEMEETLRRQFETEGKQVLPKEQSELSDSNIITPGTQFMCSLSKKLQQYI 3033
            FR AKD   A   E  LR +FE EG+++  K +S+  DSN+ITPGT+FM  LS  LQ Y+
Sbjct: 119  FRAAKDAADAAAEEARLREEFEKEGRKLPSKGESQTFDSNVITPGTEFMAVLSIALQYYV 178

Query: 3032 KLQMTEDTRWRSIQVILSDANVPGEGEHKIMSFIRSQRCCADYDPNTRHCLYGLDADLIM 2853
             L++  D  W++I+VILSDANVPGEGEHKIMS+IR QR    YDPNTRHCLYGLDADLIM
Sbjct: 179  HLRLNNDPGWQNIKVILSDANVPGEGEHKIMSYIRLQRNLKGYDPNTRHCLYGLDADLIM 238

Query: 2852 LALATHEVHFSILREDIL--AQEETLNCVSELQRTAQQEEEDKQKSGGKQVETYNPEGPS 2679
            LALATHE+HFSILRE +    Q++   C       A  E + K+K+G             
Sbjct: 239  LALATHEIHFSILREIVFTPGQDKCFLCGQMGHMAANCEGKAKRKAG------------- 285

Query: 2678 MAEDKKVNGRAPTKKIPFQFLNVWILREYLQIDMCVDNLPEKLVGKVDLERIIDDFVFMC 2499
               D+K  G A   K PFQFLN+W LREYL+ +M + N P     ++D + I+DDF+FMC
Sbjct: 286  -EFDEK--GEAIVTKKPFQFLNIWTLREYLEYEMRISNPP----SEIDFDCIVDDFIFMC 338

Query: 2498 FFVGNDFLPHMPTLAIHEGALDLLLHVYKNEFKNLGGYLIDAKRIEDKKAGYIKLKRVEK 2319
            FFVGNDFLPHMPTL I EGA++LL+ VYK EF+  GGYL +           I L RVE 
Sbjct: 339  FFVGNDFLPHMPTLEIREGAINLLIAVYKKEFREFGGYLTNGST--------INLSRVEH 390

Query: 2318 FILSVGVYEDKIFKKRTEMRDRKIRRI----IDAENADSQECFGAKFERDSWFSDCTFSN 2151
            FI +VG YEDKIF+KR  +  R+  RI      A   D  E    +F+ +S  +   F  
Sbjct: 391  FIQAVGSYEDKIFQKRARLHQRQTERIKREKAQARRGDDAE---PQFQPESLVAVSRFHG 447

Query: 2150 GK-ASGDTYPPGTSDG-----------------------------TKTSCTGIAQA---- 2073
             + AS  T PP    G                               T    I +A    
Sbjct: 448  SRLASAPTPPPFQPSGHYNSQASASVRKDNKEAFERPLKVSRVSSGATVAAAIVEAENNL 507

Query: 2072 NADVLKNTRELKQQLKEQIRQKSDTFRRCNLGVDKVKLGTPGYKERYYDEKFSTKNHGER 1893
              D   N  ELK +LKE +R+KSD F   N   DK+KLG PG+KERYY+EKFS K   E 
Sbjct: 508  EIDAQDNKDELKTKLKEILREKSDVFNSKNAEEDKIKLGEPGWKERYYEEKFSAKTPEEL 567

Query: 1892 ERKRKEVVQKYTEGLCWVLNYYYAGVPSWNWFYPFHYGPFASDFRGLSQVAIMFKKGLPF 1713
            E  RK+VV KYTEGLCWV++YYY GV SWNWFYP+HY PFASD +GL ++ I FK G PF
Sbjct: 568  EAIRKDVVLKYTEGLCWVMHYYYEGVCSWNWFYPYHYAPFASDLKGLGELDISFKLGTPF 627

Query: 1712 KPFDQLMAVLPPQSASVLPEACKKLILDKSSPLFKFYPTDFEVDLDGKRYLWQGICKLPF 1533
            KPFDQL+ V P  S+  LPE  ++L+ D +SP+  FYP DFEVD++GKR+ WQGI KLPF
Sbjct: 628  KPFDQLLGVFPAASSHALPEPYRRLMTDPNSPIIDFYPIDFEVDMNGKRFAWQGIAKLPF 687

Query: 1532 IQEECLLTETKLIENEFKEHEKQRNA--------DAAHRXXXXXXXXXXXXXXXXXXXXX 1377
            I E  LL E + IEN     EK+RNA        ++ H                      
Sbjct: 688  IDEVRLLAEVQKIENLLTPDEKRRNAIMFDLIFVNSCHPLSACISTLDNKCKNMPNSERA 747

Query: 1376 XXXXSNVINIKTLMSNGISGFIRL--------EFNGLIATDFSDKSEDPDVLCVFYELP- 1224
                      +   S G++G+I L         F   IA+   +   D  V+C  Y LP 
Sbjct: 748  VVKEKINPKERDTCSGGMNGYISLCGGEPCPPIFRSPIAS--MEDIMDNHVICAIYRLPD 805

Query: 1223 -HDCLPKPHLLEGVVVPEKTISEEDLLDEPALWHEASNGFNRRPLNQFQKLKSCKKNEEP 1047
             H  + +P   +GV  P+K +   DL  EP LWHE S   +     +     S    E  
Sbjct: 806  AHKHITRPP--QGVKFPKKIVEIGDLKPEPVLWHEDSGRRHHSENGRKNPPGSISGRELG 863

Query: 1046 DIMHR 1032
            D  HR
Sbjct: 864  DAAHR 868


>dbj|BAB86550.1| putative 5-3 exoribonuclease [Oryza sativa Japonica Group]
          Length = 1064

 Score =  706 bits (1821), Expect = 0.0
 Identities = 401/861 (46%), Positives = 507/861 (58%), Gaps = 59/861 (6%)
 Frame = -3

Query: 3521 MGVPSFYRWLVNRYPKTVVDVRENTSTD-----------------LEFDNLYLDMNGIIH 3393
            MGVP+FYRWL  +YP  VVDV E  + +                 LEFDNLYLDMNGIIH
Sbjct: 1    MGVPAFYRWLAEKYPMVVVDVVEEEAVEIEGVKVPVDTSKPNPNGLEFDNLYLDMNGIIH 60

Query: 3392 NCFHPESDNVPAPTTFEDVFNNIYDYIDKLFDIVKPRKLLYMAIDGVAPRAKMNQQRARR 3213
             CFHPE    P+PTTF +VF  ++DYID+LF +V+PRKL+YMAIDGVAPRAKMNQQR+RR
Sbjct: 61   PCFHPEDR--PSPTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRR 118

Query: 3212 FRTAKDNETAEEMEETLRRQFETEGKQVLPKEQSELSDSNIITPGTQFMCSLSKKLQQYI 3033
            FR AKD   A   EE LR +FE EG+++ PK+QS+  DSN+ITPGT+FM  LS  LQ YI
Sbjct: 119  FRAAKDAADAAAEEERLREEFEREGRKLPPKQQSQTCDSNVITPGTEFMAVLSIALQYYI 178

Query: 3032 KLQMTEDTRWRSIQVILSDANVPGEGEHKIMSFIRSQRCCADYDPNTRHCLYGLDADLIM 2853
             L++  D  W+ ++VILSDANVPGEGEHKIMS+IR QR    ++PNTRHCLYGLDADLIM
Sbjct: 179  HLRLNYDPGWKQVKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIM 238

Query: 2852 LALATHEVHFSILREDILA---QEETLNCVSELQRTAQQEEEDKQKSGGKQVETYNPEGP 2682
            LALATHEVHFSILRE +     Q++   C       A  E + K+K+G            
Sbjct: 239  LALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAG------------ 286

Query: 2681 SMAEDKKVNGRAPTKKIPFQFLNVWILREYLQIDMCVDNLPEKLVGKVDLERIIDDFVFM 2502
                D+K  G A   K P+QFLN+W LREYL+ +  + N P      +D ERI+DDF+FM
Sbjct: 287  --EFDEK--GEAIVPKKPYQFLNIWTLREYLEYEFRMQNPP----FPIDFERIVDDFIFM 338

Query: 2501 CFFVGNDFLPHMPTLAIHEGALDLLLHVYKNEFKNLGGYLIDAKRIEDKKAGYIKLKRVE 2322
            CFFVGNDFLPHMPTL I EGA++LL+ VYK EF ++GGYL DA   +        L +VE
Sbjct: 339  CFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFPSMGGYLTDACTPD--------LNKVE 390

Query: 2321 KFILSVGVYEDKIFKKRTEMRDRKIRRI------------IDAENADSQECFGAKFERDS 2178
             FI +VG YEDKIF+KR  +  R+  RI            +D    D      A+F+   
Sbjct: 391  HFIQAVGSYEDKIFQKRARLHQRQAERIKREKAQAKRGDDLDPHVRDDLIVPVARFQGSR 450

Query: 2177 WFSDCTFS-----------NGKASGDTYPPGTSDGTKTSCTGIAQANADV----LKNTRE 2043
              S    S            GK S        S    +    I +A  D+     +N  +
Sbjct: 451  LASGPVPSPYEQNGSDKNNGGKNSRARKAARVSSSGSSIAAAIVEAENDLEAQERENKED 510

Query: 2042 LKQQLKEQIRQKSDTFRRCNLGVDKVKLGTPGYKERYYDEKFSTKNHGERERKRKEVVQK 1863
            LK  LK+ +R+KSD F   N   DK+KLG PG++ERYY+EKF  +  G+ E  R++VV K
Sbjct: 511  LKTMLKDALREKSDVFNSENPEEDKIKLGEPGWRERYYEEKFGARTPGQIEEIRRDVVLK 570

Query: 1862 YTEGLCWVLNYYYAGVPSWNWFYPFHYGPFASDFRGLSQVAIMFKKGLPFKPFDQLMAVL 1683
            YTEGLCWV++YYY GV SW WFYP+HY PFASD  GL Q+ I F+ G PFKPFDQLM V 
Sbjct: 571  YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLSGLGQLNITFELGSPFKPFDQLMGVF 630

Query: 1682 PPQSASVLPEACKKLILDKSSPLFKFYPTDFEVDLDGKRYLWQGICKLPFIQEECLLTET 1503
            P  S+  LP   ++L+ D +SP+  FYPTDFEVD++GKRY WQGI KLPFI E  LL E 
Sbjct: 631  PAASSHALPVQYRQLMTDANSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEI 690

Query: 1502 KLIENEFKEHEKQRNADAAHRXXXXXXXXXXXXXXXXXXXXXXXXXSNVINIKTLM---- 1335
            K +E+     E +RN+   +                               IK  +    
Sbjct: 691  KKVEHTLTPEEARRNSIMFNMLFVNGSHPLSPYIYSLNSKFGHLPDRERNEIKEKIDPSS 750

Query: 1334 SNGISGFIRLEFNGLIATDFSDKSE------DPDVLCVFYELP--HDCLPKPHLLEGVVV 1179
            S G++G+I L         F    +      D  V+C  Y+LP  H  + +P +  GV++
Sbjct: 751  SGGMNGYISLCSGDPCPPVFRSPVDGLEDIMDNQVICTIYKLPDSHKHIARPPV--GVII 808

Query: 1178 PEKTISEEDLLDEPALWHEAS 1116
            P+KT+   DL   P LWHE S
Sbjct: 809  PKKTVEATDLKPPPVLWHEDS 829


>ref|XP_003545041.1| PREDICTED: 5'-3' exoribonuclease 3-like isoform X1 [Glycine max]
          Length = 1075

 Score =  706 bits (1821), Expect = 0.0
 Identities = 414/905 (45%), Positives = 518/905 (57%), Gaps = 75/905 (8%)
 Frame = -3

Query: 3521 MGVPSFYRWLVNRYPKTVVDVREN-----------------TSTDLEFDNLYLDMNGIIH 3393
            MGVP+FYRWL  +YP  +VD  E                     ++E+DNLYLDMNGIIH
Sbjct: 1    MGVPAFYRWLAEKYPMVIVDAIEEEPVVIDGVQIPVDTSKKNPNNIEYDNLYLDMNGIIH 60

Query: 3392 NCFHPESDNVPAPTTFEDVFNNIYDYIDKLFDIVKPRKLLYMAIDGVAPRAKMNQQRARR 3213
             CFHPE    P+PT+F++VF  ++DYID+LF +V+PR+LLYMAIDGVAPRAKMNQQR+RR
Sbjct: 61   PCFHPEDR--PSPTSFDEVFECMFDYIDRLFIMVRPRELLYMAIDGVAPRAKMNQQRSRR 118

Query: 3212 FRTAKDNETAEEMEETLRRQFETEGKQVLPKEQSELSDSNIITPGTQFMCSLSKKLQQYI 3033
            FR AKD   A   E  LR +FE EG+++  K +S+  DSN+ITPGT+FM  LS  LQ Y+
Sbjct: 119  FRAAKDAADAAAEEARLREEFEKEGRKLPSKGESQTFDSNVITPGTEFMAVLSIALQYYV 178

Query: 3032 KLQMTEDTRWRSIQVILSDANVPGEGEHKIMSFIRSQRCCADYDPNTRHCLYGLDADLIM 2853
             L++  D  W++I+VILSDANVPGEGEHKIMS+IR QR    YDPNTRHCLYGLDADLIM
Sbjct: 179  HLRLNNDPGWQNIKVILSDANVPGEGEHKIMSYIRLQRNLKGYDPNTRHCLYGLDADLIM 238

Query: 2852 LALATHEVHFSILREDIL--AQEETLNCVSELQRTAQQEEEDKQKSGGKQVETYNPEGPS 2679
            LALATHE+HFSILRE +    Q++   C       A  E + K+K+G             
Sbjct: 239  LALATHEIHFSILREIVFTPGQDKCFLCGQMGHMAANCEGKAKRKAG------------- 285

Query: 2678 MAEDKKVNGRAPTKKIPFQFLNVWILREYLQIDMCVDNLPEKLVGKVDLERIIDDFVFMC 2499
               D+K  G A   K PFQFLN+W LREYL+ +M + N P     ++D + I+DDF+FMC
Sbjct: 286  -EFDEK--GEAIVTKKPFQFLNIWTLREYLEYEMRISNPP----SEIDFDCIVDDFIFMC 338

Query: 2498 FFVGNDFLPHMPTLAIHEGALDLLLHVYKNEFKNLGGYLIDAKRIEDKKAGYIKLKRVEK 2319
            FFVGNDFLPHMPTL I EGA++LL+ VYK EF+  GGYL +           I L RVE 
Sbjct: 339  FFVGNDFLPHMPTLEIREGAINLLIAVYKKEFREFGGYLTNGST--------INLSRVEH 390

Query: 2318 FILSVGVYEDKIFKKRTEMRDRKIRRI----IDAENADSQECFGAKFERDSWFSDCTFSN 2151
            FI +VG YEDKIF+KR  +  R+  RI      A   D  E    +F+ +S  +   F  
Sbjct: 391  FIQAVGSYEDKIFQKRARLHQRQTERIKREKAQARRGDDAE---PQFQPESLVAVSRFHG 447

Query: 2150 GK-ASGDTYPPGTSDG-----------------------------TKTSCTGIAQA---- 2073
             + AS  T PP    G                               T    I +A    
Sbjct: 448  SRLASAPTPPPFQPSGHYNSQASASVRKDNKEAFERPLKVSRVSSGATVAAAIVEAENNL 507

Query: 2072 NADVLKNTRELKQQLKEQIRQKSDTFRRCNLGVDKVKLGTPGYKERYYDEKFSTKNHGER 1893
              D   N  ELK +LKE +R+KSD F   N   DK+KLG PG+KERYY+EKFS K   E 
Sbjct: 508  EIDAQDNKDELKTKLKEILREKSDVFNSKNAEEDKIKLGEPGWKERYYEEKFSAKTPEEL 567

Query: 1892 ERKRKEVVQKYTEGLCWVLNYYYAGVPSWNWFYPFHYGPFASDFRGLSQVAIMFKKGLPF 1713
            E  RK+VV KYTEGLCWV++YYY GV SWNWFYP+HY PFASD +GL ++ I FK G PF
Sbjct: 568  EAIRKDVVLKYTEGLCWVMHYYYEGVCSWNWFYPYHYAPFASDLKGLGELDISFKLGTPF 627

Query: 1712 KPFDQLMAVLPPQSASVLPEACKKLILDKSSPLFKFYPTDFEVDLDGKRYLWQGICKLPF 1533
            KPFDQL+ V P  S+  LPE  ++L+ D +SP+  FYP DFEVD++GKR+ WQGI KLPF
Sbjct: 628  KPFDQLLGVFPAASSHALPEPYRRLMTDPNSPIIDFYPIDFEVDMNGKRFAWQGIAKLPF 687

Query: 1532 IQEECLLTETKLIENEFKEHEKQRNA--------DAAHRXXXXXXXXXXXXXXXXXXXXX 1377
            I E  LL E + IEN     EK+RNA        ++ H                      
Sbjct: 688  IDEVRLLAEVQKIENLLTPDEKRRNAIMFDLIFVNSCH--PLSACISTLDNKCKNMPNSE 745

Query: 1376 XXXXSNVINIKTLMSNGISGFIRL--------EFNGLIATDFSDKSEDPDVLCVFYELP- 1224
                   IN K   S G++G+I L         F   IA+   +   D  V+C  Y LP 
Sbjct: 746  RAVVKEKINPKE--SGGMNGYISLCGGEPCPPIFRSPIAS--MEDIMDNHVICAIYRLPD 801

Query: 1223 -HDCLPKPHLLEGVVVPEKTISEEDLLDEPALWHEASNGFNRRPLNQFQKLKSCKKNEEP 1047
             H  + +P   +GV  P+K +   DL  EP LWHE S   +     +     S    E  
Sbjct: 802  AHKHITRPP--QGVKFPKKIVEIGDLKPEPVLWHEDSGRRHHSENGRKNPPGSISGRELG 859

Query: 1046 DIMHR 1032
            D  HR
Sbjct: 860  DAAHR 864


>ref|XP_006645089.1| PREDICTED: 5'-3' exoribonuclease 3-like isoform X1 [Oryza
            brachyantha]
          Length = 1066

 Score =  704 bits (1817), Expect = 0.0
 Identities = 410/874 (46%), Positives = 513/874 (58%), Gaps = 65/874 (7%)
 Frame = -3

Query: 3521 MGVPSFYRWLVNRYPKTVVDVRENTSTD-----------------LEFDNLYLDMNGIIH 3393
            MGVP+FYRWL  +YP  VVDV E  + +                 LEFDNLYLDMNGIIH
Sbjct: 1    MGVPAFYRWLAEKYPMVVVDVVEEEAVEIEGVKVPVDTSKPNPNSLEFDNLYLDMNGIIH 60

Query: 3392 NCFHPESDNVPAPTTFEDVFNNIYDYIDKLFDIVKPRKLLYMAIDGVAPRAKMNQQRARR 3213
             CFHPE    P+PTTF +VF  ++DYID+LF +V+PRKLLYMAIDGVAPRAKMNQQR+RR
Sbjct: 61   PCFHPEDR--PSPTTFAEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118

Query: 3212 FRTAKDNETAEEMEETLRRQFETEGKQVLPKEQSELSDSNIITPGTQFMCSLSKKLQQYI 3033
            FR AKD   A   EE LR +FE EG+++ PK QS+  DSNIITPGT+FM  LS  LQ YI
Sbjct: 119  FRAAKDAADAAAEEERLREEFEREGRKLPPKHQSQTCDSNIITPGTEFMDVLSIALQYYI 178

Query: 3032 KLQMTEDTRWRSIQVILSDANVPGEGEHKIMSFIRSQRCCADYDPNTRHCLYGLDADLIM 2853
              ++  D  W+ I+VILSDANVPGEGEHKIMS+IR QR    ++PNTRHCLYGLDADLIM
Sbjct: 179  HCRLNYDPGWKQIKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIM 238

Query: 2852 LALATHEVHFSILREDILA---QEETLNCVSELQRTAQQEEEDKQKSGGKQVETYNPEGP 2682
            LALATHEVHFSILRE +     Q++   C       A  E + K+K+G            
Sbjct: 239  LALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKPKRKAG------------ 286

Query: 2681 SMAEDKKVNGRAPTKKIPFQFLNVWILREYLQIDMCVDNLPEKLVGKVDLERIIDDFVFM 2502
                D+K  G A   K P+QFLN+W LREYL+ +  + N P      +D ERI+DDF+FM
Sbjct: 287  --EFDEK--GDAIVPKKPYQFLNIWTLREYLEYEFRMPNPP----FPIDFERIVDDFIFM 338

Query: 2501 CFFVGNDFLPHMPTLAIHEGALDLLLHVYKNEFKNLGGYLIDAKRIEDKKAGYIKLKRVE 2322
            CFFVGNDFLPHMPTL I EGA++LL+ VYK EF ++GGYL DA   +        L +VE
Sbjct: 339  CFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFPSMGGYLTDASTPD--------LNKVE 390

Query: 2321 KFILSVGVYEDKIFKKRTEMRDRKIRRI-IDAENADSQECFGAKFERDSWFSDCTFSNGK 2145
             FI +VG YEDKIF+KR  +  R+  RI  +   A   +      + D       F   +
Sbjct: 391  HFIQAVGSYEDKIFQKRARLHQRQAERIKREKAQAKRGDDLDPHVKDDLIVPVARFQGSR 450

Query: 2144 -ASGDTYPPGTSDGT-----------------KTSCTGIAQA--------NADVLKNTRE 2043
             ASG    P   +GT                  +S + IA A         A   +N  +
Sbjct: 451  LASGPVPSPYEQNGTDKNKGGKNSRAQKAARVSSSGSSIAAAIVEAENDLEAQERENKED 510

Query: 2042 LKQQLKEQIRQKSDTFRRCNLGVDKVKLGTPGYKERYYDEKFSTKNHGERERKRKEVVQK 1863
            LK  LK+ +R+KSD F   N   DKVKLG PG++ERYY+EKF  +   + E  R++VV K
Sbjct: 511  LKTMLKDALREKSDVFNSENPEEDKVKLGQPGWRERYYEEKFGARTPRQIEEIRRDVVLK 570

Query: 1862 YTEGLCWVLNYYYAGVPSWNWFYPFHYGPFASDFRGLSQVAIMFKKGLPFKPFDQLMAVL 1683
            YTEGLCWV++YYY GV SW WFYP+HY PFASD  GL Q+ I F+ G PFKPFDQLM V 
Sbjct: 571  YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLSGLGQLNISFELGSPFKPFDQLMGVF 630

Query: 1682 PPQSASVLPEACKKLILDKSSPLFKFYPTDFEVDLDGKRYLWQGICKLPFIQEECLLTET 1503
            P  S+  LP   ++L+ D +SP+  FYPTDFEVD++GKRY WQGI KLPFI E  LL E 
Sbjct: 631  PAASSHALPVKYRQLMTDPNSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEI 690

Query: 1502 KLIENEFKEHEKQRNADAAHRXXXXXXXXXXXXXXXXXXXXXXXXXSNVINIKTLM---- 1335
            K +E+     E +RN+   +                               IK  +    
Sbjct: 691  KKVEHTLTPEEARRNSIMFNMLFVNGSHPLSPYIYSLNSKFGHLPNKERNAIKEKIDPSS 750

Query: 1334 SNGISGFIRLEFNG-------LIATDFSDKSEDPDVLCVFYELP--HDCLPKPHLLEGVV 1182
            S G++G+I L  NG           D  +   D  V+C  Y+LP  H  + +P +  GV+
Sbjct: 751  SGGMNGYISL-CNGDPCPPVFRSPVDGLEDIMDNQVICTIYKLPDSHKHIARPPV--GVI 807

Query: 1181 VPEKTISEEDLLDEPALWHEAS-----NGFNRRP 1095
            +P+KT+   DL   P LWHE S     +  NRRP
Sbjct: 808  IPKKTVEATDLKPPPVLWHEDSGRRPYDNNNRRP 841


>ref|XP_004972700.1| PREDICTED: 5'-3' exoribonuclease 3-like isoform X1 [Setaria italica]
          Length = 1064

 Score =  703 bits (1815), Expect = 0.0
 Identities = 402/886 (45%), Positives = 511/886 (57%), Gaps = 61/886 (6%)
 Frame = -3

Query: 3521 MGVPSFYRWLVNRYPKTVVDVRENTSTD-----------------LEFDNLYLDMNGIIH 3393
            MGVP+FYRWL  +YP  VVDV E    +                 LEFDNLYLDMNGIIH
Sbjct: 1    MGVPAFYRWLAEKYPMVVVDVVEEEPVEIGGVRVPVDTSKPNPNGLEFDNLYLDMNGIIH 60

Query: 3392 NCFHPESDNVPAPTTFEDVFNNIYDYIDKLFDIVKPRKLLYMAIDGVAPRAKMNQQRARR 3213
             CFHPE    P+PTTF +VF  ++DYID+LF +V+PRKL+YMAIDGVAPRAKMNQQR+RR
Sbjct: 61   PCFHPEDR--PSPTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRR 118

Query: 3212 FRTAKDNETAEEMEETLRRQFETEGKQVLPKEQSELSDSNIITPGTQFMCSLSKKLQQYI 3033
            FR AKD   A   EE LR +FE EG+++  K+QS+  DSN+ITPGT+FM  LS  LQ YI
Sbjct: 119  FRAAKDASDAAAEEERLREEFEREGRRLPAKQQSQTCDSNVITPGTEFMAVLSVALQYYI 178

Query: 3032 KLQMTEDTRWRSIQVILSDANVPGEGEHKIMSFIRSQRCCADYDPNTRHCLYGLDADLIM 2853
             L++  D  W+ I+VILSDANVPGEGEHKIMS+IR QR    ++PNTRHCLYGLDADLIM
Sbjct: 179  HLRLNYDPGWKQIKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIM 238

Query: 2852 LALATHEVHFSILREDILA---QEETLNCVSELQRTAQQEEEDKQKSGGKQVETYNPEGP 2682
            LALATHEVHFSILRE +     Q++   C       A  E + K+K+G      Y+ +G 
Sbjct: 239  LALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKGKRKAG-----EYDEKGD 293

Query: 2681 SMAEDKKVNGRAPTKKIPFQFLNVWILREYLQIDMCVDNLPEKLVGKVDLERIIDDFVFM 2502
             +   K           P+QFLN+W LREYL+ +  + N P     ++D ERI+DDF+FM
Sbjct: 294  PIVPKK-----------PYQFLNIWTLREYLEYEFRMPNPP----FQIDFERIVDDFIFM 338

Query: 2501 CFFVGNDFLPHMPTLAIHEGALDLLLHVYKNEFKNLGGYLIDAKRIEDKKAGYIKLKRVE 2322
            CFFVGNDFLPHMPTL I EGA++LL+ VYK EF ++GGYL D+   +        L RVE
Sbjct: 339  CFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFPSMGGYLTDSCTPD--------LDRVE 390

Query: 2321 KFILSVGVYEDKIFKKRTEMRDRKIRRI-IDAENADSQECFGAKFERDSWFSDCTFSNGK 2145
             FI +VG YEDKIF+KR  +  R+  RI  +   A   +        D       F   +
Sbjct: 391  HFIQAVGSYEDKIFQKRARLHQRQAERIKREKAQAKRGDDLDPHVREDLIVPVANFRGSR 450

Query: 2144 -ASGDTYPPGTSDGTKTS--------------CTGIAQANADV----LKNTRELKQQLKE 2022
             ASG    P   +G  +                  I +A  D+     +N  +LK +LK+
Sbjct: 451  LASGAVPSPYEQNGAHSQARKAARVSSPGSSIAAAIVEAENDLGSQERENKEDLKSRLKD 510

Query: 2021 QIRQKSDTFRRCNLGVDKVKLGTPGYKERYYDEKFSTKNHGERERKRKEVVQKYTEGLCW 1842
             +R+KSD F   N   DKVKLG PG+++RYY+EKF  +   + E  R++V  KY EGLCW
Sbjct: 511  ALREKSDVFNSENPEEDKVKLGEPGWRDRYYEEKFGARTSDQMEEIRRDVALKYAEGLCW 570

Query: 1841 VLNYYYAGVPSWNWFYPFHYGPFASDFRGLSQVAIMFKKGLPFKPFDQLMAVLPPQSASV 1662
            V++YYY GV SW WFYP+HY PFASD + LSQ+ I F+ G PFKPFDQLM V P  SA  
Sbjct: 571  VMHYYYEGVCSWQWFYPYHYAPFASDLKSLSQLNITFELGSPFKPFDQLMGVFPAASAHA 630

Query: 1661 LPEACKKLILDKSSPLFKFYPTDFEVDLDGKRYLWQGICKLPFIQEECLLTETKLIENEF 1482
            LP   ++L+ D SSP+  FYPTDFEVD++GKR+ WQGI KLPFI E+ LL E K +E+  
Sbjct: 631  LPLQYRQLMTDPSSPIIDFYPTDFEVDMNGKRFSWQGIAKLPFIDEDRLLAEIKKVEHTL 690

Query: 1481 KEHEKQRNADAAHRXXXXXXXXXXXXXXXXXXXXXXXXXSNVINIKTLMSNGISGFIRLE 1302
               E  RN+   +                           +   IK  +    SG     
Sbjct: 691  TPEEAMRNSTMCNMLFVNGSHPLSPYIYSLNSKFGNLPDKDRNEIKEKLDPSHSG----G 746

Query: 1301 FNGLIATDFSDKSE--------------DPDVLCVFYEL--PHDCLPKPHLLEGVVVPEK 1170
             NG IA    D S               D  V+C  Y+L  PH  + +P    GV++P+K
Sbjct: 747  MNGYIALCSGDPSPPVFRSPVDGLEDIMDNQVICSIYKLPDPHKHIARPP--AGVIIPKK 804

Query: 1169 TISEEDLLDEPALWHEAS-----NGFNRRPLNQFQKLKSCKKNEEP 1047
            ++   DL   P LWHE S     +  NRRP +   +      N  P
Sbjct: 805  SVEAGDLKPPPVLWHEDSGRRPHDNNNRRPYDNNNRRPYDNNNRRP 850


>ref|XP_006390286.1| hypothetical protein EUTSA_v10018062mg [Eutrema salsugineum]
            gi|557086720|gb|ESQ27572.1| hypothetical protein
            EUTSA_v10018062mg [Eutrema salsugineum]
          Length = 1023

 Score =  702 bits (1812), Expect = 0.0
 Identities = 405/866 (46%), Positives = 520/866 (60%), Gaps = 55/866 (6%)
 Frame = -3

Query: 3521 MGVPSFYRWLVNRYPKTVVDVRENTSTD-----------------LEFDNLYLDMNGIIH 3393
            MGVP+FYRWL  +YP  V DV E    +                 LE+DNLYLDMNGIIH
Sbjct: 1    MGVPAFYRWLAEKYPMIVADVVEEEPVEIEGVKIPVDTSKPNPNNLEYDNLYLDMNGIIH 60

Query: 3392 NCFHPESDNVPAPTTFEDVFNNIYDYIDKLFDIVKPRKLLYMAIDGVAPRAKMNQQRARR 3213
             CFHPE    P+PTTFE+VF  ++DYID+LF +V+PRKLLYMAIDGVAPRAKMNQQR+RR
Sbjct: 61   PCFHPEDR--PSPTTFEEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118

Query: 3212 FRTAKDNETAEEMEETLRRQFETEGKQVLPKEQSELSDSNIITPGTQFMCSLSKKLQQYI 3033
            FR+AKD   A   EE LR +FE EG+++ PK  S++ DSN+ITPGT+FM  LS  LQ Y+
Sbjct: 119  FRSAKDASDAAAEEERLREEFEREGRKLPPKVDSQVFDSNVITPGTEFMGVLSIALQYYV 178

Query: 3032 KLQMTEDTRWRSIQVILSDANVPGEGEHKIMSFIRSQRCCADYDPNTRHCLYGLDADLIM 2853
             L++  D  W++I+VILSDANVPGEGEHKIMS+IR QR    +DPNTRHCLYGLDADLIM
Sbjct: 179  HLRLNYDVGWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 238

Query: 2852 LALATHEVHFSILREDIL--AQEETLNCVSELQRTAQQEEEDKQKSGGKQVETYNPEGPS 2679
            L LATHEVHFSILRE +    Q++      ++   A   E   +K  G+           
Sbjct: 239  LGLATHEVHFSILREVVFTPGQQDKCFLCGQMGHMASDCEGKAKKRAGE----------- 287

Query: 2678 MAEDKKVNGRAPTKKIPFQFLNVWILREYLQIDMCVDNLPEKLVGKVDLERIIDDFVFMC 2499
               D+K +G     K P+QFL++WILREYL+ +M + N P     ++DLERI+DDF+F+C
Sbjct: 288  --FDEKGDGFV---KKPYQFLHIWILREYLEFEMRIPNPP----FEIDLERIVDDFIFIC 338

Query: 2498 FFVGNDFLPHMPTLAIHEGALDLLLHVYKNEFKNLGGYLIDAKRIEDKKAGYIKLKRVEK 2319
            FFVGNDFLPHMPTL I EGA++LL+ VYK EF++L GYL D  +          LKRVE+
Sbjct: 339  FFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRSLDGYLTDGCK--------PNLKRVEQ 390

Query: 2318 FILSVGVYEDKIFKKRTEMRDRKIRRII-DAENADSQECFGAKFERDSWFSDCTFSNGKA 2142
            FI +VG +EDKIF+KRT +  R+  RI  D       +      + DS      FS  + 
Sbjct: 391  FIQAVGSFEDKIFQKRTRLHQRQAERIKGDKARKKRMDDAAPTVQPDSLVPVARFSGSRL 450

Query: 2141 S------------GDTYPP----GTSDGTKTSCTGIAQAN---ADVLKNTRELKQQLKEQ 2019
            +            G + PP      S G+      +   N   +D  +N  ELK +LKE 
Sbjct: 451  ASAPAPSPFQANDGGSAPPQKARRVSSGSSIGAAIVDVENSLESDEHENKEELKTKLKEL 510

Query: 2018 IRQKSDTFRRCNLGVDKVKLGTPGYKERYYDEKFSTKNHGERERKRKEVVQKYTEGLCWV 1839
            IR+KSD F       DKVKLG PG++ERYY+EKFS     E ER RK+VV KYTEGLCWV
Sbjct: 511  IREKSDAFNSDTHEEDKVKLGEPGWRERYYEEKFSVVTPEEMERLRKDVVLKYTEGLCWV 570

Query: 1838 LNYYYAGVPSWNWFYPFHYGPFASDFRGLSQVAIMFKKGLPFKPFDQLMAVLPPQSASVL 1659
            ++YY  GV SW WFYP+HY PFASD + L ++ I F+ G PFKPF+QL+ V P  SA  L
Sbjct: 571  MHYYMEGVCSWQWFYPYHYAPFASDLKDLGELDIQFELGTPFKPFNQLLGVFPAASAHAL 630

Query: 1658 PEACKKLILDKSSPLFKFYPTDFEVDLDGKRYLWQGICKLPFIQEECLLTETKLIENEFK 1479
            PE  + L+ D +SP+  FYPTDFEVD++GKRY WQGI KLPFI E  LL     +E    
Sbjct: 631  PERYRTLMTDPNSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDERRLLEAVSEVEFTLT 690

Query: 1478 EHEKQRNA--------DAAHRXXXXXXXXXXXXXXXXXXXXXXXXXSNVINIKTLMSNGI 1323
            + EK+RN+          +HR                            + I+  +S+G+
Sbjct: 691  DEEKRRNSMMCDMLFIATSHRLAELIFSLDNHCRQLSARERVDLK----VKIRPELSDGM 746

Query: 1322 SGFIRL---EFNGLIATDFSDKSED---PDVLCVFYELP--HDCLPKPHLLEGVVVPEKT 1167
            +G++     E +  I     +  ED     V+C  Y LP  H  + +P    GV+ P+K 
Sbjct: 747  NGYLTPCSGETHPPIFRSPMEGMEDILANQVICCIYRLPDAHKHITRPP--PGVIFPKKI 804

Query: 1166 ISEEDLLDEPALWHEASNGFNRRPLN 1089
            ++  DL   PALWHE  NG  RRP++
Sbjct: 805  VNIGDLKPPPALWHE-ENG--RRPMH 827


>ref|XP_004972701.1| PREDICTED: 5'-3' exoribonuclease 3-like isoform X2 [Setaria italica]
          Length = 1048

 Score =  702 bits (1811), Expect = 0.0
 Identities = 400/870 (45%), Positives = 507/870 (58%), Gaps = 61/870 (7%)
 Frame = -3

Query: 3521 MGVPSFYRWLVNRYPKTVVDVRENTSTD-----------------LEFDNLYLDMNGIIH 3393
            MGVP+FYRWL  +YP  VVDV E    +                 LEFDNLYLDMNGIIH
Sbjct: 1    MGVPAFYRWLAEKYPMVVVDVVEEEPVEIGGVRVPVDTSKPNPNGLEFDNLYLDMNGIIH 60

Query: 3392 NCFHPESDNVPAPTTFEDVFNNIYDYIDKLFDIVKPRKLLYMAIDGVAPRAKMNQQRARR 3213
             CFHPE    P+PTTF +VF  ++DYID+LF +V+PRKL+YMAIDGVAPRAKMNQQR+RR
Sbjct: 61   PCFHPEDR--PSPTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRR 118

Query: 3212 FRTAKDNETAEEMEETLRRQFETEGKQVLPKEQSELSDSNIITPGTQFMCSLSKKLQQYI 3033
            FR AKD   A   EE LR +FE EG+++  K+QS+  DSN+ITPGT+FM  LS  LQ YI
Sbjct: 119  FRAAKDASDAAAEEERLREEFEREGRRLPAKQQSQTCDSNVITPGTEFMAVLSVALQYYI 178

Query: 3032 KLQMTEDTRWRSIQVILSDANVPGEGEHKIMSFIRSQRCCADYDPNTRHCLYGLDADLIM 2853
             L++  D  W+ I+VILSDANVPGEGEHKIMS+IR QR    ++PNTRHCLYGLDADLIM
Sbjct: 179  HLRLNYDPGWKQIKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIM 238

Query: 2852 LALATHEVHFSILREDILA---QEETLNCVSELQRTAQQEEEDKQKSGGKQVETYNPEGP 2682
            LALATHEVHFSILRE +     Q++   C       A  E + K+K+G      Y+ +G 
Sbjct: 239  LALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKGKRKAG-----EYDEKGD 293

Query: 2681 SMAEDKKVNGRAPTKKIPFQFLNVWILREYLQIDMCVDNLPEKLVGKVDLERIIDDFVFM 2502
             +   K           P+QFLN+W LREYL+ +  + N P     ++D ERI+DDF+FM
Sbjct: 294  PIVPKK-----------PYQFLNIWTLREYLEYEFRMPNPP----FQIDFERIVDDFIFM 338

Query: 2501 CFFVGNDFLPHMPTLAIHEGALDLLLHVYKNEFKNLGGYLIDAKRIEDKKAGYIKLKRVE 2322
            CFFVGNDFLPHMPTL I EGA++LL+ VYK EF ++GGYL D+   +        L RVE
Sbjct: 339  CFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFPSMGGYLTDSCTPD--------LDRVE 390

Query: 2321 KFILSVGVYEDKIFKKRTEMRDRKIRRI-IDAENADSQECFGAKFERDSWFSDCTFSNGK 2145
             FI +VG YEDKIF+KR  +  R+  RI  +   A   +        D       F   +
Sbjct: 391  HFIQAVGSYEDKIFQKRARLHQRQAERIKREKAQAKRGDDLDPHVREDLIVPVANFRGSR 450

Query: 2144 -ASGDTYPPGTSDGTKTS--------------CTGIAQANADV----LKNTRELKQQLKE 2022
             ASG    P   +G  +                  I +A  D+     +N  +LK +LK+
Sbjct: 451  LASGAVPSPYEQNGAHSQARKAARVSSPGSSIAAAIVEAENDLGSQERENKEDLKSRLKD 510

Query: 2021 QIRQKSDTFRRCNLGVDKVKLGTPGYKERYYDEKFSTKNHGERERKRKEVVQKYTEGLCW 1842
             +R+KSD F   N   DKVKLG PG+++RYY+EKF  +   + E  R++V  KY EGLCW
Sbjct: 511  ALREKSDVFNSENPEEDKVKLGEPGWRDRYYEEKFGARTSDQMEEIRRDVALKYAEGLCW 570

Query: 1841 VLNYYYAGVPSWNWFYPFHYGPFASDFRGLSQVAIMFKKGLPFKPFDQLMAVLPPQSASV 1662
            V++YYY GV SW WFYP+HY PFASD + LSQ+ I F+ G PFKPFDQLM V P  SA  
Sbjct: 571  VMHYYYEGVCSWQWFYPYHYAPFASDLKSLSQLNITFELGSPFKPFDQLMGVFPAASAHA 630

Query: 1661 LPEACKKLILDKSSPLFKFYPTDFEVDLDGKRYLWQGICKLPFIQEECLLTETKLIENEF 1482
            LP   ++L+ D SSP+  FYPTDFEVD++GKR+ WQGI KLPFI E+ LL E K +E+  
Sbjct: 631  LPLQYRQLMTDPSSPIIDFYPTDFEVDMNGKRFSWQGIAKLPFIDEDRLLAEIKKVEHTL 690

Query: 1481 KEHEKQRNADAAHRXXXXXXXXXXXXXXXXXXXXXXXXXSNVINIKTLMSNGISGFIRLE 1302
               E  RN+   +                           +   IK  +    SG     
Sbjct: 691  TPEEAMRNSTMCNMLFVNGSHPLSPYIYSLNSKFGNLPDKDRNEIKEKLDPSHSG----G 746

Query: 1301 FNGLIATDFSDKSE--------------DPDVLCVFYEL--PHDCLPKPHLLEGVVVPEK 1170
             NG IA    D S               D  V+C  Y+L  PH  + +P    GV++P+K
Sbjct: 747  MNGYIALCSGDPSPPVFRSPVDGLEDIMDNQVICSIYKLPDPHKHIARPP--AGVIIPKK 804

Query: 1169 TISEEDLLDEPALWHEAS-----NGFNRRP 1095
            ++   DL   P LWHE S     +  NRRP
Sbjct: 805  SVEAGDLKPPPVLWHEDSGRRPHDNNNRRP 834


>ref|XP_003564736.1| PREDICTED: 5'-3' exoribonuclease 3-like [Brachypodium distachyon]
          Length = 1061

 Score =  701 bits (1810), Expect = 0.0
 Identities = 406/894 (45%), Positives = 518/894 (57%), Gaps = 65/894 (7%)
 Frame = -3

Query: 3521 MGVPSFYRWLVNRYPKTVVDVRENTSTD-----------------LEFDNLYLDMNGIIH 3393
            MGVP+FYRWL  +YP  VVDV E    +                 LEFDNLYLDMNGIIH
Sbjct: 1    MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVKVPVDTSKPNPNSLEFDNLYLDMNGIIH 60

Query: 3392 NCFHPESDNVPAPTTFEDVFNNIYDYIDKLFDIVKPRKLLYMAIDGVAPRAKMNQQRARR 3213
             CFHPE    P+PTTF +VF  ++DYID+LF +V+PRKL+YMAIDGVAPRAKMNQQR+RR
Sbjct: 61   PCFHPEDR--PSPTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRR 118

Query: 3212 FRTAKDNETAEEMEETLRRQFETEGKQVLPKEQSELSDSNIITPGTQFMCSLSKKLQQYI 3033
            FR AKD   A   EE LR +FE EG+++ PK QS+  DSN+ITPGT+FM  LS  LQ YI
Sbjct: 119  FRAAKDAADAAAEEEKLREEFEREGRKLPPKLQSQTCDSNVITPGTEFMAVLSVALQYYI 178

Query: 3032 KLQMTEDTRWRSIQVILSDANVPGEGEHKIMSFIRSQRCCADYDPNTRHCLYGLDADLIM 2853
             L++  D  W+ I+VILSDANVPGEGEHK+MS+IR QR    ++PNTRHCLYGLDADLIM
Sbjct: 179  HLRLNYDPGWKQIKVILSDANVPGEGEHKVMSYIRGQRNLPGFNPNTRHCLYGLDADLIM 238

Query: 2852 LALATHEVHFSILREDILA---QEETLNCVSELQRTAQQEEEDKQKSGGKQVETYNPEGP 2682
            LALATHEVHFSILRE +     QE+   C       A+ E + K+K+G            
Sbjct: 239  LALATHEVHFSILREVVFTPGQQEKCFLCGQVGHLAAKCEGKAKRKAG------------ 286

Query: 2681 SMAEDKKVNGRAPTKKIPFQFLNVWILREYLQIDMCVDNLPEKLVGKVDLERIIDDFVFM 2502
                D+K  G A   K P+QFLN+W LREY++ +  + N P     ++DLERIIDDF+FM
Sbjct: 287  --EFDEK--GDAIVPKKPYQFLNIWTLREYIEYEFRMPNPP----FQIDLERIIDDFIFM 338

Query: 2501 CFFVGNDFLPHMPTLAIHEGALDLLLHVYKNEFKNLGGYLIDAKRIEDKKAGYIKLKRVE 2322
            CFFVGNDFLPHMPTL I EGA++LL+ VYK EF ++GGYL DA   +        L RVE
Sbjct: 339  CFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFPSMGGYLTDACTPD--------LNRVE 390

Query: 2321 KFILSVGVYEDKIFKKRTEMRDRKIRRI-IDAENADSQECFGAKFERDSWFSDCTFSNGK 2145
             FI +VG YEDKIF+KR  +  R+  RI  D   A   +        D       F   +
Sbjct: 391  HFIQAVGSYEDKIFQKRARLHQRQAERIRRDKAQAKRGDDLDPHVRTDLIVPVARFQGSR 450

Query: 2144 -ASGDTYPPGTSDGTKTSCT---------------------GIAQA----NADVLKNTRE 2043
             ASG    P   +G+  + T                      + +A     A   +N  +
Sbjct: 451  LASGSVASPFEQNGSHKNSTEKGSRAQKAARVSSSDSSLSAALVEAENSLEAQERENKED 510

Query: 2042 LKQQLKEQIRQKSDTFRRCNLGVDKVKLGTPGYKERYYDEKFSTKNHGERERKRKEVVQK 1863
            +K  LK+ +R+KSD F   N   DKVKLG PG++ERYY++KF  +   + E  R++VV K
Sbjct: 511  MKSMLKDALREKSDLFNSENPEEDKVKLGEPGWRERYYEDKFGARTPEQIEEIRRDVVLK 570

Query: 1862 YTEGLCWVLNYYYAGVPSWNWFYPFHYGPFASDFRGLSQVAIMFKKGLPFKPFDQLMAVL 1683
            YTEGLCWV++YYY GV SW WFYP+HY PFASD +GL ++ I F  G PFKPFDQLM V 
Sbjct: 571  YTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKGLGELNITFNLGSPFKPFDQLMGVF 630

Query: 1682 PPQSASVLPEACKKLILDKSSPLFKFYPTDFEVDLDGKRYLWQGICKLPFIQEECLLTET 1503
            P  S+  LP   +KL+ D +SP+  FYP DFEVD++GKR+ WQGI KLPFI E  LL E 
Sbjct: 631  PAASSHALPLQYRKLMSDPNSPIIDFYPIDFEVDMNGKRFSWQGIAKLPFIDESRLLAEI 690

Query: 1502 KLIENEFKEHEKQRNADAAHRXXXXXXXXXXXXXXXXXXXXXXXXXSNVINIKTLM---- 1335
            K +E+     E +RN+   +                               IK L+    
Sbjct: 691  KKVEHTLTPEEARRNSTMYNMLFVNGSHPLSPYIYSLNSKFGHLPDDERNTIKELLDPSA 750

Query: 1334 SNGISGFIRL--------EFNGLIATDFSDKSEDPDVLCVFYEL--PHDCLPKPHLLEGV 1185
            S G++G+I L         F   +  D  +   D  V+C  Y+L  PH  + +P +  GV
Sbjct: 751  SGGMNGYISLCGGDPSPPVFRSPV--DGLEDIMDNQVICSIYKLPDPHKHIARPPI--GV 806

Query: 1184 VVPEKTISEEDLLDEPALWHEASNGFNRRPL----NQFQKLKSCKKNEEPDIMH 1035
            ++P+K +   DL   P LWHE +    RRP     N  +   +  +   P  MH
Sbjct: 807  IIPKKIVEAGDLKPPPVLWHEDT---GRRPYDNNNNNRRHSDNSSRQNPPGAMH 857


>ref|NP_565114.1| 5'-3' exoribonuclease 3 [Arabidopsis thaliana]
            gi|75262832|sp|Q9FQ03.1|XRN3_ARATH RecName: Full=5'-3'
            exoribonuclease 3; AltName: Full=Protein EXORIBONUCLEASE
            3 gi|11875628|gb|AAG40732.1|AF286719_1 XRN3 [Arabidopsis
            thaliana] gi|332197621|gb|AEE35742.1| 5'-3'
            exoribonuclease 3 [Arabidopsis thaliana]
          Length = 1020

 Score =  701 bits (1809), Expect = 0.0
 Identities = 405/867 (46%), Positives = 521/867 (60%), Gaps = 56/867 (6%)
 Frame = -3

Query: 3521 MGVPSFYRWLVNRYPKTVVDVRENTSTD-----------------LEFDNLYLDMNGIIH 3393
            MGVPSFYRWL  +YP  V DV E    +                 LE+DNLYLDMNGIIH
Sbjct: 1    MGVPSFYRWLAEKYPLLVADVIEEEPVEIEGIKIPVDTSKPNPNNLEYDNLYLDMNGIIH 60

Query: 3392 NCFHPESDNVPAPTTFEDVFNNIYDYIDKLFDIVKPRKLLYMAIDGVAPRAKMNQQRARR 3213
             CFHPE    P+PTTFE+VF  ++DYID+LF +V+PRKLLYMAIDGVAPRAKMNQQR+RR
Sbjct: 61   PCFHPEDR--PSPTTFEEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRR 118

Query: 3212 FRTAKDNETAEEMEETLRRQFETEGKQVLPKEQSELSDSNIITPGTQFMCSLSKKLQQYI 3033
            FR+AKD   A   EE LR +FE EG+++ PK  S++ DSN+ITPGT+FM  LS  LQ Y+
Sbjct: 119  FRSAKDASDAAAEEERLREEFEREGRRLPPKVDSQVFDSNVITPGTEFMGVLSIALQYYV 178

Query: 3032 KLQMTEDTRWRSIQVILSDANVPGEGEHKIMSFIRSQRCCADYDPNTRHCLYGLDADLIM 2853
             L++  D  W++I+VILSDANVPGEGEHKIMS+IR QR    +DPNTRHCLYGLDADLIM
Sbjct: 179  HLRLNHDVGWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 238

Query: 2852 LALATHEVHFSILREDIL--AQEETLNCVSELQRTAQQEEEDKQKSGGKQVETYNPEGPS 2679
            L LATHEVHFSILRE +    Q+E      ++   A   E   +K  G+           
Sbjct: 239  LGLATHEVHFSILREVVYTPGQQERCFLCGQMGHFASNCEGKPKKRAGE----------- 287

Query: 2678 MAEDKKVNGRAPTKKIPFQFLNVWILREYLQIDMCVDNLPEKLVGKVDLERIIDDFVFMC 2499
               D+K +G    KK P+QFL++W+LREYL+++M + N P     ++DLERI+DDF+F+C
Sbjct: 288  --SDEKGDGNDFVKK-PYQFLHIWVLREYLELEMRIPNPP----FEIDLERIVDDFIFIC 340

Query: 2498 FFVGNDFLPHMPTLAIHEGALDLLLHVYKNEFKNLGGYLIDAKRIEDKKAGYIKLKRVEK 2319
            FFVGNDFLPHMPTL I EGA++LL+ VYK EF++  GYL D  +          LKRVE+
Sbjct: 341  FFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRSFDGYLTDGCK--------PNLKRVEQ 392

Query: 2318 FILSVGVYEDKIFKKRTEMRDRKIRRI--IDAENADSQECFGAKFERDSWFSDCTFSNGK 2145
            FI +VG +EDKIF+KR     R+  R+    A  A  +    A   +        FS  +
Sbjct: 393  FIQAVGSFEDKIFQKRAMQHQRQAERVKRDKAGKATKRMDDEAPTVQPDLVPVARFSGSR 452

Query: 2144 -ASGDTYPPGTSDGTKT------------SCTGIA------QANADVLKNTRELKQQLKE 2022
             AS  T  P  S+  ++            S  G A         +D  +N  ELK +LKE
Sbjct: 453  LASAPTPSPFQSNDGRSAPHQKVRRLSPGSSVGAAIVDVENSLESDERENKEELKTKLKE 512

Query: 2021 QIRQKSDTFRRCNLGVDKVKLGTPGYKERYYDEKFSTKNHGERERKRKEVVQKYTEGLCW 1842
             IR+KSD F       DKVKLG PG++ERYY+EKFS     E ER RK+VV KYTEGLCW
Sbjct: 513  LIREKSDAFNSDTTEEDKVKLGQPGWRERYYEEKFSVVTPEEMERVRKDVVLKYTEGLCW 572

Query: 1841 VLNYYYAGVPSWNWFYPFHYGPFASDFRGLSQVAIMFKKGLPFKPFDQLMAVLPPQSASV 1662
            V++YY  GV SW WFYP+HY PFASD + L ++ I F+ G PFKPF+QL+ V P  S+  
Sbjct: 573  VMHYYMEGVCSWQWFYPYHYAPFASDLKDLGEMDIKFELGTPFKPFNQLLGVFPAASSHA 632

Query: 1661 LPEACKKLILDKSSPLFKFYPTDFEVDLDGKRYLWQGICKLPFIQEECLLTETKLIENEF 1482
            LPE  + L+ D +SP+  FYPTDFEVD++GKR+ WQGI KLPFI E  LL     +E   
Sbjct: 633  LPERYRTLMTDPNSPIIDFYPTDFEVDMNGKRFSWQGIAKLPFIDERRLLEAVSEVEFTL 692

Query: 1481 KEHEKQRNA--------DAAHRXXXXXXXXXXXXXXXXXXXXXXXXXSNVINIKTLMSNG 1326
             + EK+RN+          +HR                            + IK  +S+G
Sbjct: 693  TDEEKRRNSRMCDMLFIATSHRLAELVFSLDNHCRQLSARERVDFK----VKIKPKLSDG 748

Query: 1325 ISGFIRL---EFNGLIATDFSDKSED---PDVLCVFYELP--HDCLPKPHLLEGVVVPEK 1170
            ++G++     E +  +     +  ED     V+C  Y LP  H+ + +P    GV+ P+K
Sbjct: 749  MNGYLTPCSGETHPPVFRSPMEGMEDILTNQVICCIYRLPDAHEHITRPP--PGVIFPKK 806

Query: 1169 TISEEDLLDEPALWHEASNGFNRRPLN 1089
            T+   DL   PALWHE  NG  RRP++
Sbjct: 807  TVDIGDLKPPPALWHE-DNG--RRPMH 830