BLASTX nr result
ID: Rauwolfia21_contig00011394
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00011394
(965 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI16435.3| unnamed protein product [Vitis vinifera] 367 5e-99
gb|EOY32515.1| Topoisomerase 6 subunit B isoform 1 [Theobroma ca... 366 8e-99
gb|EOY32516.1| Topoisomerase 6 subunit B isoform 2 [Theobroma ca... 361 2e-97
ref|XP_004142138.1| PREDICTED: DNA topoisomerase 6 subunit B-lik... 361 2e-97
gb|EXB48402.1| DNA topoisomerase 6 subunit B [Morus notabilis] 356 8e-96
ref|XP_004486933.1| PREDICTED: DNA topoisomerase 6 subunit B-lik... 355 2e-95
ref|XP_003597480.1| DNA topoisomerase 6 subunit B [Medicago trun... 352 2e-94
ref|XP_006386093.1| hypothetical protein POPTR_0003s22040g [Popu... 351 3e-94
ref|XP_006297133.1| hypothetical protein CARUB_v10013135mg [Caps... 351 3e-94
ref|XP_006445971.1| hypothetical protein CICLE_v10014511mg [Citr... 350 4e-94
ref|XP_004228355.1| PREDICTED: DNA topoisomerase 6 subunit B-lik... 350 4e-94
dbj|BAB02486.1| DNA topoisomerase VI subunit B-like protein [Ara... 350 5e-94
ref|NP_188714.2| DNA topoisomerase 6 subunit B [Arabidopsis thal... 350 5e-94
ref|XP_006361287.1| PREDICTED: DNA topoisomerase 6 subunit B-lik... 348 1e-93
ref|XP_006361286.1| PREDICTED: DNA topoisomerase 6 subunit B-lik... 348 1e-93
ref|XP_003543555.1| PREDICTED: DNA topoisomerase 6 subunit B-lik... 347 5e-93
gb|ESW22398.1| hypothetical protein PHAVU_005G150500g [Phaseolus... 345 1e-92
ref|XP_006406350.1| hypothetical protein EUTSA_v10020214mg [Eutr... 345 1e-92
ref|XP_002885404.1| hypothetical protein ARALYDRAFT_318827 [Arab... 339 1e-90
ref|XP_004295229.1| PREDICTED: DNA topoisomerase 6 subunit B-lik... 336 7e-90
>emb|CBI16435.3| unnamed protein product [Vitis vinifera]
Length = 673
Score = 367 bits (941), Expect = 5e-99
Identities = 182/222 (81%), Positives = 203/222 (91%)
Frame = +1
Query: 1 GGKDVKQGLNIFRFANRIPLLFEQGADVVTRTTLKRINWNSYKINQTQDKIGVFVSIVST 180
GGKDVKQGLNIFRFANRIPLLFEQGADVVTRT LKRINWNSYKINQ QDKIGVFVSIVST
Sbjct: 452 GGKDVKQGLNIFRFANRIPLLFEQGADVVTRTALKRINWNSYKINQAQDKIGVFVSIVST 511
Query: 181 KIPFKGTGKEYIGDDISEIASAVKTAIQQCCTQLKSKIVRRIQAREQQERKRNLSKYIPN 360
KIPFKGTGKEYIGDDISEIASAVK++IQQCC QLKSKIV++IQAR QQERKRNLSKYIP+
Sbjct: 512 KIPFKGTGKEYIGDDISEIASAVKSSIQQCCIQLKSKIVKKIQARVQQERKRNLSKYIPD 571
Query: 361 VTGAIYDVLKEMSKMHASKKRRCDAKDGELLKKISSEIITKETLSEKLAQHVEQVDYEMA 540
TGAIYDVL+EM+++HASKK+R + +D ++L+K+S+ ITK+TLSEKLA+HVEQVDYEMA
Sbjct: 572 ATGAIYDVLREMAQLHASKKKRYEDEDADVLRKVSTHSITKQTLSEKLAKHVEQVDYEMA 631
Query: 541 LEYATQSGVNEEPRENFYIQSLEADHKFTDFHSPVFVFRLSQ 666
LEYATQSGV+EEPRE Y+QSLE F DFHSPVF FRL Q
Sbjct: 632 LEYATQSGVSEEPREAIYLQSLEDGKNFIDFHSPVFAFRLYQ 673
>gb|EOY32515.1| Topoisomerase 6 subunit B isoform 1 [Theobroma cacao]
Length = 669
Score = 366 bits (939), Expect = 8e-99
Identities = 179/222 (80%), Positives = 202/222 (90%)
Frame = +1
Query: 1 GGKDVKQGLNIFRFANRIPLLFEQGADVVTRTTLKRINWNSYKINQTQDKIGVFVSIVST 180
GGKDVKQGLNIFRFANRIPLLFEQG DVVTRT LKRI+W+SYKINQTQDKIGVFVSIVST
Sbjct: 448 GGKDVKQGLNIFRFANRIPLLFEQGGDVVTRTALKRISWSSYKINQTQDKIGVFVSIVST 507
Query: 181 KIPFKGTGKEYIGDDISEIASAVKTAIQQCCTQLKSKIVRRIQAREQQERKRNLSKYIPN 360
KIPFKGTGKEYIGDDISEIASAVK+AI+QCC QLKSKIV+++QAREQQERKRNLSKYIP+
Sbjct: 508 KIPFKGTGKEYIGDDISEIASAVKSAIKQCCIQLKSKIVKKMQAREQQERKRNLSKYIPD 567
Query: 361 VTGAIYDVLKEMSKMHASKKRRCDAKDGELLKKISSEIITKETLSEKLAQHVEQVDYEMA 540
T A+YDVLKEM+K HASKK+R + +D ++L+ +S ++ITKETL EKL QHVE+VDYEMA
Sbjct: 568 ATNAVYDVLKEMAKSHASKKKRIEERDADILQNVSDQLITKETLKEKLTQHVEKVDYEMA 627
Query: 541 LEYATQSGVNEEPRENFYIQSLEADHKFTDFHSPVFVFRLSQ 666
LEYATQSGVNEEPRE+ Y+QSL A F DFHSP+FVFRL Q
Sbjct: 628 LEYATQSGVNEEPREDMYLQSLYAKSNFFDFHSPIFVFRLFQ 669
>gb|EOY32516.1| Topoisomerase 6 subunit B isoform 2 [Theobroma cacao]
Length = 513
Score = 361 bits (927), Expect = 2e-97
Identities = 179/223 (80%), Positives = 202/223 (90%), Gaps = 1/223 (0%)
Frame = +1
Query: 1 GGKDVKQ-GLNIFRFANRIPLLFEQGADVVTRTTLKRINWNSYKINQTQDKIGVFVSIVS 177
GGKDVKQ GLNIFRFANRIPLLFEQG DVVTRT LKRI+W+SYKINQTQDKIGVFVSIVS
Sbjct: 291 GGKDVKQQGLNIFRFANRIPLLFEQGGDVVTRTALKRISWSSYKINQTQDKIGVFVSIVS 350
Query: 178 TKIPFKGTGKEYIGDDISEIASAVKTAIQQCCTQLKSKIVRRIQAREQQERKRNLSKYIP 357
TKIPFKGTGKEYIGDDISEIASAVK+AI+QCC QLKSKIV+++QAREQQERKRNLSKYIP
Sbjct: 351 TKIPFKGTGKEYIGDDISEIASAVKSAIKQCCIQLKSKIVKKMQAREQQERKRNLSKYIP 410
Query: 358 NVTGAIYDVLKEMSKMHASKKRRCDAKDGELLKKISSEIITKETLSEKLAQHVEQVDYEM 537
+ T A+YDVLKEM+K HASKK+R + +D ++L+ +S ++ITKETL EKL QHVE+VDYEM
Sbjct: 411 DATNAVYDVLKEMAKSHASKKKRIEERDADILQNVSDQLITKETLKEKLTQHVEKVDYEM 470
Query: 538 ALEYATQSGVNEEPRENFYIQSLEADHKFTDFHSPVFVFRLSQ 666
ALEYATQSGVNEEPRE+ Y+QSL A F DFHSP+FVFRL Q
Sbjct: 471 ALEYATQSGVNEEPREDMYLQSLYAKSNFFDFHSPIFVFRLFQ 513
>ref|XP_004142138.1| PREDICTED: DNA topoisomerase 6 subunit B-like [Cucumis sativus]
gi|449525918|ref|XP_004169963.1| PREDICTED: DNA
topoisomerase 6 subunit B-like [Cucumis sativus]
Length = 696
Score = 361 bits (927), Expect = 2e-97
Identities = 177/220 (80%), Positives = 200/220 (90%)
Frame = +1
Query: 1 GGKDVKQGLNIFRFANRIPLLFEQGADVVTRTTLKRINWNSYKINQTQDKIGVFVSIVST 180
GGKDVKQGLNIFRFANRIPLLFEQGADVVTRT LKRINWNSYKINQ QDKIGVFVSIVST
Sbjct: 475 GGKDVKQGLNIFRFANRIPLLFEQGADVVTRTALKRINWNSYKINQAQDKIGVFVSIVST 534
Query: 181 KIPFKGTGKEYIGDDISEIASAVKTAIQQCCTQLKSKIVRRIQAREQQERKRNLSKYIPN 360
KIPFKGTGKEYIGDDISEIASAVK+AIQQCC QLKSKIV++IQAREQQERKRNLS+YIP+
Sbjct: 535 KIPFKGTGKEYIGDDISEIASAVKSAIQQCCIQLKSKIVKKIQAREQQERKRNLSRYIPD 594
Query: 361 VTGAIYDVLKEMSKMHASKKRRCDAKDGELLKKISSEIITKETLSEKLAQHVEQVDYEMA 540
T A+Y+VLKEM+++HASKK+R D +D E+L K+S+ +IT ETL +KLAQHVEQVD+EMA
Sbjct: 595 ATNAVYNVLKEMAQVHASKKKRHDCEDAEILSKVSARLITNETLRDKLAQHVEQVDHEMA 654
Query: 541 LEYATQSGVNEEPRENFYIQSLEADHKFTDFHSPVFVFRL 660
+EYATQSG + E +E YIQSL+A H FTDF SP+FVFRL
Sbjct: 655 MEYATQSGASAEAKEEMYIQSLDATHSFTDFQSPLFVFRL 694
>gb|EXB48402.1| DNA topoisomerase 6 subunit B [Morus notabilis]
Length = 642
Score = 356 bits (913), Expect = 8e-96
Identities = 175/220 (79%), Positives = 203/220 (92%)
Frame = +1
Query: 1 GGKDVKQGLNIFRFANRIPLLFEQGADVVTRTTLKRINWNSYKINQTQDKIGVFVSIVST 180
GGKDVKQGLNIFRFANRIPLLFEQGADVVTRT LKRINW++YKINQTQDKIGVFVSIVST
Sbjct: 426 GGKDVKQGLNIFRFANRIPLLFEQGADVVTRTALKRINWSNYKINQTQDKIGVFVSIVST 485
Query: 181 KIPFKGTGKEYIGDDISEIASAVKTAIQQCCTQLKSKIVRRIQAREQQERKRNLSKYIPN 360
KIPFKGTGKEYIGDDI+EIASAVK CC QLKSKIV+++QAREQQERKRNLSKYIP+
Sbjct: 486 KIPFKGTGKEYIGDDITEIASAVK-----CCVQLKSKIVKKMQAREQQERKRNLSKYIPD 540
Query: 361 VTGAIYDVLKEMSKMHASKKRRCDAKDGELLKKISSEIITKETLSEKLAQHVEQVDYEMA 540
VTGA+YDVLK M+++HASKK+R +A+D ELL K+S+ ++TKETL EKLAQ+VEQVDYEMA
Sbjct: 541 VTGAVYDVLKGMAQLHASKKKRFEAEDAELLGKVSARVVTKETLMEKLAQYVEQVDYEMA 600
Query: 541 LEYATQSGVNEEPRENFYIQSLEADHKFTDFHSPVFVFRL 660
LEYATQSGV+EEPRE+ ++QSLEA+ ++ D H+P+FVFRL
Sbjct: 601 LEYATQSGVSEEPRESIFLQSLEAEDQYVDLHNPIFVFRL 640
>ref|XP_004486933.1| PREDICTED: DNA topoisomerase 6 subunit B-like [Cicer arietinum]
Length = 669
Score = 355 bits (910), Expect = 2e-95
Identities = 175/222 (78%), Positives = 200/222 (90%)
Frame = +1
Query: 1 GGKDVKQGLNIFRFANRIPLLFEQGADVVTRTTLKRINWNSYKINQTQDKIGVFVSIVST 180
GGKDVKQGLNIFRFANRIPLLFEQGADVVTRT LKRINW+SYKINQ QDKIGVFVSIVST
Sbjct: 448 GGKDVKQGLNIFRFANRIPLLFEQGADVVTRTALKRINWSSYKINQVQDKIGVFVSIVST 507
Query: 181 KIPFKGTGKEYIGDDISEIASAVKTAIQQCCTQLKSKIVRRIQAREQQERKRNLSKYIPN 360
KIPFKGTGKEYIG+DI+EIASAVK+AIQQCC QLKSKIV+R+QAREQQERKRNLS+YIP+
Sbjct: 508 KIPFKGTGKEYIGNDINEIASAVKSAIQQCCVQLKSKIVKRMQAREQQERKRNLSRYIPD 567
Query: 361 VTGAIYDVLKEMSKMHASKKRRCDAKDGELLKKISSEIITKETLSEKLAQHVEQVDYEMA 540
+GA+Y+VLK+M+++H KK R D ELL+K+S +ITKETL EKLA+HVEQVDYEMA
Sbjct: 568 ASGAVYNVLKQMTQLHPPKKNRYGDDDVELLRKVSENLITKETLCEKLAKHVEQVDYEMA 627
Query: 541 LEYATQSGVNEEPRENFYIQSLEADHKFTDFHSPVFVFRLSQ 666
LEYATQSGV+EEPRE +IQSLEA++K D H+P FVFR+ Q
Sbjct: 628 LEYATQSGVSEEPRETIFIQSLEAENKMIDLHAPFFVFRVFQ 669
>ref|XP_003597480.1| DNA topoisomerase 6 subunit B [Medicago truncatula]
gi|355486528|gb|AES67731.1| DNA topoisomerase 6 subunit B
[Medicago truncatula]
Length = 671
Score = 352 bits (902), Expect = 2e-94
Identities = 174/222 (78%), Positives = 200/222 (90%)
Frame = +1
Query: 1 GGKDVKQGLNIFRFANRIPLLFEQGADVVTRTTLKRINWNSYKINQTQDKIGVFVSIVST 180
GGKDVKQGLNIFRFANRIPLLFEQGADVVTRT LKRINW+SYKINQ QDKIGVFVSIVST
Sbjct: 450 GGKDVKQGLNIFRFANRIPLLFEQGADVVTRTALKRINWSSYKINQVQDKIGVFVSIVST 509
Query: 181 KIPFKGTGKEYIGDDISEIASAVKTAIQQCCTQLKSKIVRRIQAREQQERKRNLSKYIPN 360
KIPFKGTGKEYIGDDI+EIASAVK+AIQQCC QLKSKI++RIQAREQQERKRNLS+YIP+
Sbjct: 510 KIPFKGTGKEYIGDDITEIASAVKSAIQQCCIQLKSKIMKRIQAREQQERKRNLSRYIPD 569
Query: 361 VTGAIYDVLKEMSKMHASKKRRCDAKDGELLKKISSEIITKETLSEKLAQHVEQVDYEMA 540
+GA Y+VLK+M ++ SKK R D ELL+KIS +++TKET SEKLA+HVEQVDYEMA
Sbjct: 570 ASGAFYNVLKQMLPLNPSKKSRYGDDDVELLRKISEDLVTKETFSEKLAKHVEQVDYEMA 629
Query: 541 LEYATQSGVNEEPRENFYIQSLEADHKFTDFHSPVFVFRLSQ 666
LE+ATQSGV+EEPRE YIQ+L+A++K D H+P+FVFR+ Q
Sbjct: 630 LEFATQSGVSEEPRETIYIQALDAENKTIDLHAPIFVFRVFQ 671
>ref|XP_006386093.1| hypothetical protein POPTR_0003s22040g [Populus trichocarpa]
gi|550343750|gb|ERP63890.1| hypothetical protein
POPTR_0003s22040g [Populus trichocarpa]
Length = 673
Score = 351 bits (900), Expect = 3e-94
Identities = 169/220 (76%), Positives = 199/220 (90%)
Frame = +1
Query: 1 GGKDVKQGLNIFRFANRIPLLFEQGADVVTRTTLKRINWNSYKINQTQDKIGVFVSIVST 180
GGKDVKQGLNIFRFANRIPLLFEQGADVVTRT LKRINW SYKINQTQDKIGVFVS+VST
Sbjct: 452 GGKDVKQGLNIFRFANRIPLLFEQGADVVTRTALKRINWGSYKINQTQDKIGVFVSVVST 511
Query: 181 KIPFKGTGKEYIGDDISEIASAVKTAIQQCCTQLKSKIVRRIQAREQQERKRNLSKYIPN 360
KIPFKGTGKEYIGDDI+EIA+AVK+AIQQCC QLKSKI++++ AREQQERKRNLS+YIP+
Sbjct: 512 KIPFKGTGKEYIGDDINEIATAVKSAIQQCCIQLKSKIIKKMLAREQQERKRNLSRYIPD 571
Query: 361 VTGAIYDVLKEMSKMHASKKRRCDAKDGELLKKISSEIITKETLSEKLAQHVEQVDYEMA 540
T A+YDVLK MS+ HASKK+R ++ E+L I++ +ITKET+ EKLA+HVE+VDYEMA
Sbjct: 572 ATNAVYDVLKYMSQSHASKKKRYSGEEAEILSNITANLITKETIKEKLAEHVEKVDYEMA 631
Query: 541 LEYATQSGVNEEPRENFYIQSLEADHKFTDFHSPVFVFRL 660
LEYATQSGV EEPRE+ +IQ+L+ ++KF +F SP+FVFRL
Sbjct: 632 LEYATQSGVTEEPREDIFIQTLDPENKFIEFQSPIFVFRL 671
>ref|XP_006297133.1| hypothetical protein CARUB_v10013135mg [Capsella rubella]
gi|482565842|gb|EOA30031.1| hypothetical protein
CARUB_v10013135mg [Capsella rubella]
Length = 670
Score = 351 bits (900), Expect = 3e-94
Identities = 173/221 (78%), Positives = 199/221 (90%), Gaps = 1/221 (0%)
Frame = +1
Query: 1 GGKDVKQGLNIFRFANRIPLLFEQGADVVTRTTLKRINWNSYKINQTQDKIGVFVSIVST 180
GG+DVKQG+NIFRFANRIPLLFEQG DVVTRT KRINWNSYKINQTQDKIGVFVSIVST
Sbjct: 448 GGRDVKQGINIFRFANRIPLLFEQGGDVVTRTASKRINWNSYKINQTQDKIGVFVSIVST 507
Query: 181 KIPFKGTGKEYIGDDISEIASAVKTAIQQCCTQLKSKIVRRIQAREQQERKRNLSKYIPN 360
KIPFKGTGKEYIGDDISEIA+AVK+AIQQCC QLKSKIV+R+QAREQQERKR+LS+YIP+
Sbjct: 508 KIPFKGTGKEYIGDDISEIATAVKSAIQQCCIQLKSKIVKRLQAREQQERKRSLSRYIPD 567
Query: 361 VTGAIYDVLKEMSKMHASKKRRCDAKDGELLKKISSEIITKETLSEKLAQHVEQVDYEMA 540
TGA+Y+VLK+M++ H +K++R +D +L K+S EIITKETL+EKLAQHVEQVDYEMA
Sbjct: 568 ATGAVYEVLKQMTEEHKTKRKRYGEEDTAMLDKVSKEIITKETLTEKLAQHVEQVDYEMA 627
Query: 541 LEYATQSGVNEEPRENFYIQSLEADH-KFTDFHSPVFVFRL 660
LEYATQSGV+EEPREN Y+Q L+++ F D HSP FVFRL
Sbjct: 628 LEYATQSGVSEEPRENIYLQHLDSNKTNFIDLHSPTFVFRL 668
>ref|XP_006445971.1| hypothetical protein CICLE_v10014511mg [Citrus clementina]
gi|568883995|ref|XP_006494721.1| PREDICTED: DNA
topoisomerase 6 subunit B-like [Citrus sinensis]
gi|557548582|gb|ESR59211.1| hypothetical protein
CICLE_v10014511mg [Citrus clementina]
Length = 667
Score = 350 bits (899), Expect = 4e-94
Identities = 175/222 (78%), Positives = 195/222 (87%)
Frame = +1
Query: 1 GGKDVKQGLNIFRFANRIPLLFEQGADVVTRTTLKRINWNSYKINQTQDKIGVFVSIVST 180
GGKDVKQGLNIFRFANRIPLLFEQG DVVTRT +KRINW+SYKINQTQDKIGVFVSIVST
Sbjct: 446 GGKDVKQGLNIFRFANRIPLLFEQGGDVVTRTAMKRINWSSYKINQTQDKIGVFVSIVST 505
Query: 181 KIPFKGTGKEYIGDDISEIASAVKTAIQQCCTQLKSKIVRRIQAREQQERKRNLSKYIPN 360
KIPFKGTGKEYIGDD EIASAVK+AIQQCC QLKSKIVR+IQ REQQERKRNLS+Y+P+
Sbjct: 506 KIPFKGTGKEYIGDDTKEIASAVKSAIQQCCIQLKSKIVRKIQDREQQERKRNLSRYVPD 565
Query: 361 VTGAIYDVLKEMSKMHASKKRRCDAKDGELLKKISSEIITKETLSEKLAQHVEQVDYEMA 540
T A+YDVLKE+SK HASKKRR + ++ ++L+K+ S ITKETL E LAQ+VE+VDYEMA
Sbjct: 566 ATYAVYDVLKEISKFHASKKRRYEEEEEDVLRKVQSRSITKETLKEMLAQYVEKVDYEMA 625
Query: 541 LEYATQSGVNEEPRENFYIQSLEADHKFTDFHSPVFVFRLSQ 666
LEYATQSGVNEEPRE YIQ+LE + FTD HS FVFR Q
Sbjct: 626 LEYATQSGVNEEPREAIYIQALEDGYNFTDLHSSNFVFRFIQ 667
>ref|XP_004228355.1| PREDICTED: DNA topoisomerase 6 subunit B-like [Solanum lycopersicum]
Length = 672
Score = 350 bits (899), Expect = 4e-94
Identities = 173/219 (78%), Positives = 192/219 (87%)
Frame = +1
Query: 1 GGKDVKQGLNIFRFANRIPLLFEQGADVVTRTTLKRINWNSYKINQTQDKIGVFVSIVST 180
GGKDVKQGLN+FRFANRIPLLFEQGADVVTRT +KRINWNSYKINQTQDKIGVFVSIVST
Sbjct: 451 GGKDVKQGLNVFRFANRIPLLFEQGADVVTRTAMKRINWNSYKINQTQDKIGVFVSIVST 510
Query: 181 KIPFKGTGKEYIGDDISEIASAVKTAIQQCCTQLKSKIVRRIQAREQQERKRNLSKYIPN 360
KIPFKGTGKEYIGDDISEIASAVKTAI+QCC QLKSKIV+RI AREQQERKRNLSKYIP+
Sbjct: 511 KIPFKGTGKEYIGDDISEIASAVKTAIKQCCNQLKSKIVKRIHAREQQERKRNLSKYIPS 570
Query: 361 VTGAIYDVLKEMSKMHASKKRRCDAKDGELLKKISSEIITKETLSEKLAQHVEQVDYEMA 540
T AIYD+LK+ + +HASKKRR + +LLK++S +TK+T EKLAQHVE+VDYEM
Sbjct: 571 ATAAIYDLLKQTTNVHASKKRRFRDDNADLLKQVSVNSLTKDTFREKLAQHVEKVDYEMG 630
Query: 541 LEYATQSGVNEEPRENFYIQSLEADHKFTDFHSPVFVFR 657
LEYATQ+GVNEEPRE YI+SL D F D SP+FVFR
Sbjct: 631 LEYATQTGVNEEPREEIYIESLNEDKNFLDLQSPIFVFR 669
>dbj|BAB02486.1| DNA topoisomerase VI subunit B-like protein [Arabidopsis thaliana]
Length = 694
Score = 350 bits (898), Expect = 5e-94
Identities = 173/221 (78%), Positives = 199/221 (90%), Gaps = 1/221 (0%)
Frame = +1
Query: 1 GGKDVKQGLNIFRFANRIPLLFEQGADVVTRTTLKRINWNSYKINQTQDKIGVFVSIVST 180
GG+DVKQG+NIFRFANRIPLLFEQGADVVTRT LKRINWNSYKINQTQDKIGVFVSIVST
Sbjct: 472 GGRDVKQGINIFRFANRIPLLFEQGADVVTRTALKRINWNSYKINQTQDKIGVFVSIVST 531
Query: 181 KIPFKGTGKEYIGDDISEIASAVKTAIQQCCTQLKSKIVRRIQAREQQERKRNLSKYIPN 360
KIPFKGTGKEYIGDDISEIA+AVK+AIQQCC QLKSKIV+R+QAREQQERKR+LS+YIP+
Sbjct: 532 KIPFKGTGKEYIGDDISEIATAVKSAIQQCCIQLKSKIVKRLQAREQQERKRSLSRYIPD 591
Query: 361 VTGAIYDVLKEMSKMHASKKRRCDAKDGELLKKISSEIITKETLSEKLAQHVEQVDYEMA 540
TGA+Y+VLK+M++ H +K++R +D +L K+S +IITKETL EKLA+HVEQVDYEMA
Sbjct: 592 ATGAVYEVLKQMTEEHKTKRKRYGEEDIVMLDKVSKQIITKETLKEKLAEHVEQVDYEMA 651
Query: 541 LEYATQSGVNEEPRENFYIQSLEAD-HKFTDFHSPVFVFRL 660
LEYATQSGV+EEPREN Y+Q L+ + F D HSP FVFRL
Sbjct: 652 LEYATQSGVSEEPRENIYLQHLDPNKSNFIDLHSPTFVFRL 692
>ref|NP_188714.2| DNA topoisomerase 6 subunit B [Arabidopsis thaliana]
gi|75169001|sp|Q9C5V6.1|TOP6B_ARATH RecName: Full=DNA
topoisomerase 6 subunit B; Short=AtTOP6B; AltName:
Full=Protein BRASSINOSTEROID INSENSITIVE 3; AltName:
Full=Protein ELONGATED HYPOCOTYL 6; AltName: Full=Protein
ROOT HAIRLESS 3 gi|12331188|emb|CAC24690.1| topoisomerase
6 subunit B [Arabidopsis thaliana]
gi|332642901|gb|AEE76422.1| DNA topoisomerase 6 subunit B
[Arabidopsis thaliana]
Length = 670
Score = 350 bits (898), Expect = 5e-94
Identities = 173/221 (78%), Positives = 199/221 (90%), Gaps = 1/221 (0%)
Frame = +1
Query: 1 GGKDVKQGLNIFRFANRIPLLFEQGADVVTRTTLKRINWNSYKINQTQDKIGVFVSIVST 180
GG+DVKQG+NIFRFANRIPLLFEQGADVVTRT LKRINWNSYKINQTQDKIGVFVSIVST
Sbjct: 448 GGRDVKQGINIFRFANRIPLLFEQGADVVTRTALKRINWNSYKINQTQDKIGVFVSIVST 507
Query: 181 KIPFKGTGKEYIGDDISEIASAVKTAIQQCCTQLKSKIVRRIQAREQQERKRNLSKYIPN 360
KIPFKGTGKEYIGDDISEIA+AVK+AIQQCC QLKSKIV+R+QAREQQERKR+LS+YIP+
Sbjct: 508 KIPFKGTGKEYIGDDISEIATAVKSAIQQCCIQLKSKIVKRLQAREQQERKRSLSRYIPD 567
Query: 361 VTGAIYDVLKEMSKMHASKKRRCDAKDGELLKKISSEIITKETLSEKLAQHVEQVDYEMA 540
TGA+Y+VLK+M++ H +K++R +D +L K+S +IITKETL EKLA+HVEQVDYEMA
Sbjct: 568 ATGAVYEVLKQMTEEHKTKRKRYGEEDIVMLDKVSKQIITKETLKEKLAEHVEQVDYEMA 627
Query: 541 LEYATQSGVNEEPRENFYIQSLEAD-HKFTDFHSPVFVFRL 660
LEYATQSGV+EEPREN Y+Q L+ + F D HSP FVFRL
Sbjct: 628 LEYATQSGVSEEPRENIYLQHLDPNKSNFIDLHSPTFVFRL 668
>ref|XP_006361287.1| PREDICTED: DNA topoisomerase 6 subunit B-like isoform X2 [Solanum
tuberosum]
Length = 573
Score = 348 bits (894), Expect = 1e-93
Identities = 175/221 (79%), Positives = 195/221 (88%), Gaps = 1/221 (0%)
Frame = +1
Query: 1 GGKDVKQGLNIFRFANRIPLLFEQGADVVTRTTLKRINWNSYKINQTQDKIGVFVSIVST 180
GGKDVKQGLN+FRFANRIPLLFEQGADVVTRT +KRINWNSYKINQTQDKIGVFVSIVST
Sbjct: 351 GGKDVKQGLNVFRFANRIPLLFEQGADVVTRTAMKRINWNSYKINQTQDKIGVFVSIVST 410
Query: 181 KIPFKGTGKEYIGDDISEIASAVKTAIQQCCTQLKSKIVRRIQAREQQERKRNLSKYIPN 360
KIPFKGTGKEYIGDDISEIASAVKTAIQQCC QLKSKIV+RI AREQQERKRNLSKYIP+
Sbjct: 411 KIPFKGTGKEYIGDDISEIASAVKTAIQQCCNQLKSKIVKRIHAREQQERKRNLSKYIPS 470
Query: 361 VTGAIYDVLKEMSKMHASKKRRCDAKDGELLKKISSEIITKETLSEKLAQHVEQVDYEMA 540
T AIYD+LK+ + +HASKKRR + +LLK++S +TK+T EKLAQHVE+VDYEM
Sbjct: 471 ATAAIYDLLKQTTIVHASKKRRFRDDNADLLKQVSVNSLTKDTFREKLAQHVEKVDYEMG 530
Query: 541 LEYATQSGVNEEPRENFYIQSLEADHK-FTDFHSPVFVFRL 660
LEYATQ+GVNEEPRE+ YI+SL+ D K D SP+FVFRL
Sbjct: 531 LEYATQTGVNEEPREDIYIESLDEDKKNLIDLQSPIFVFRL 571
>ref|XP_006361286.1| PREDICTED: DNA topoisomerase 6 subunit B-like isoform X1 [Solanum
tuberosum]
Length = 673
Score = 348 bits (894), Expect = 1e-93
Identities = 175/221 (79%), Positives = 195/221 (88%), Gaps = 1/221 (0%)
Frame = +1
Query: 1 GGKDVKQGLNIFRFANRIPLLFEQGADVVTRTTLKRINWNSYKINQTQDKIGVFVSIVST 180
GGKDVKQGLN+FRFANRIPLLFEQGADVVTRT +KRINWNSYKINQTQDKIGVFVSIVST
Sbjct: 451 GGKDVKQGLNVFRFANRIPLLFEQGADVVTRTAMKRINWNSYKINQTQDKIGVFVSIVST 510
Query: 181 KIPFKGTGKEYIGDDISEIASAVKTAIQQCCTQLKSKIVRRIQAREQQERKRNLSKYIPN 360
KIPFKGTGKEYIGDDISEIASAVKTAIQQCC QLKSKIV+RI AREQQERKRNLSKYIP+
Sbjct: 511 KIPFKGTGKEYIGDDISEIASAVKTAIQQCCNQLKSKIVKRIHAREQQERKRNLSKYIPS 570
Query: 361 VTGAIYDVLKEMSKMHASKKRRCDAKDGELLKKISSEIITKETLSEKLAQHVEQVDYEMA 540
T AIYD+LK+ + +HASKKRR + +LLK++S +TK+T EKLAQHVE+VDYEM
Sbjct: 571 ATAAIYDLLKQTTIVHASKKRRFRDDNADLLKQVSVNSLTKDTFREKLAQHVEKVDYEMG 630
Query: 541 LEYATQSGVNEEPRENFYIQSLEADHK-FTDFHSPVFVFRL 660
LEYATQ+GVNEEPRE+ YI+SL+ D K D SP+FVFRL
Sbjct: 631 LEYATQTGVNEEPREDIYIESLDEDKKNLIDLQSPIFVFRL 671
>ref|XP_003543555.1| PREDICTED: DNA topoisomerase 6 subunit B-like isoform 1 [Glycine max]
Length = 673
Score = 347 bits (889), Expect = 5e-93
Identities = 173/222 (77%), Positives = 196/222 (88%)
Frame = +1
Query: 1 GGKDVKQGLNIFRFANRIPLLFEQGADVVTRTTLKRINWNSYKINQTQDKIGVFVSIVST 180
GGK+VKQGLNIFRFANRIPLLFEQGADVVTRT KRINW+SYKINQ QDKIGVFVSIVST
Sbjct: 452 GGKNVKQGLNIFRFANRIPLLFEQGADVVTRTAHKRINWSSYKINQMQDKIGVFVSIVST 511
Query: 181 KIPFKGTGKEYIGDDISEIASAVKTAIQQCCTQLKSKIVRRIQAREQQERKRNLSKYIPN 360
KIPFKGTGKEYIGDDI+EIASAVK AIQQCC QLKSKIV+++ AREQQERKRNLS+YIP+
Sbjct: 512 KIPFKGTGKEYIGDDITEIASAVKYAIQQCCVQLKSKIVKKMHAREQQERKRNLSRYIPD 571
Query: 361 VTGAIYDVLKEMSKMHASKKRRCDAKDGELLKKISSEIITKETLSEKLAQHVEQVDYEMA 540
+GA+Y+VLKEM+++HASKK R D ELL K+S +ITKETL EKL++HVEQVDYEMA
Sbjct: 572 ASGAVYNVLKEMTQLHASKKIRYGDDDAELLSKVSENLITKETLCEKLSKHVEQVDYEMA 631
Query: 541 LEYATQSGVNEEPRENFYIQSLEADHKFTDFHSPVFVFRLSQ 666
LEYATQSGV+EEPRE YIQSLEA++K D +P VFR+ Q
Sbjct: 632 LEYATQSGVSEEPRETIYIQSLEAENKMIDLQTPFIVFRVFQ 673
>gb|ESW22398.1| hypothetical protein PHAVU_005G150500g [Phaseolus vulgaris]
Length = 672
Score = 345 bits (886), Expect = 1e-92
Identities = 173/222 (77%), Positives = 198/222 (89%)
Frame = +1
Query: 1 GGKDVKQGLNIFRFANRIPLLFEQGADVVTRTTLKRINWNSYKINQTQDKIGVFVSIVST 180
GGK+VKQGLNIFRFANRIPLLFEQGADVVTRT KRINW+SYKINQ QDKIGVFVSIVST
Sbjct: 451 GGKNVKQGLNIFRFANRIPLLFEQGADVVTRTAHKRINWSSYKINQIQDKIGVFVSIVST 510
Query: 181 KIPFKGTGKEYIGDDISEIASAVKTAIQQCCTQLKSKIVRRIQAREQQERKRNLSKYIPN 360
KIPFKGTGKEYIGDDI+EIASAVK AIQQCC QLKSKIV++IQAREQQERKRNLS+YIP+
Sbjct: 511 KIPFKGTGKEYIGDDITEIASAVKYAIQQCCVQLKSKIVKKIQAREQQERKRNLSRYIPD 570
Query: 361 VTGAIYDVLKEMSKMHASKKRRCDAKDGELLKKISSEIITKETLSEKLAQHVEQVDYEMA 540
+GA+Y+VLK+M+++ A+KK R D ELL+K+S +ITKETL EKLA+HVEQVDYEMA
Sbjct: 571 ASGAVYNVLKQMTQLPAAKKIRYGDDDVELLRKVSENLITKETLCEKLAKHVEQVDYEMA 630
Query: 541 LEYATQSGVNEEPRENFYIQSLEADHKFTDFHSPVFVFRLSQ 666
LEYATQSGV+EEPRE YIQSL+A++K D +P FVFR+ Q
Sbjct: 631 LEYATQSGVSEEPRETIYIQSLDAENKIIDLQTPFFVFRVFQ 672
>ref|XP_006406350.1| hypothetical protein EUTSA_v10020214mg [Eutrema salsugineum]
gi|557107496|gb|ESQ47803.1| hypothetical protein
EUTSA_v10020214mg [Eutrema salsugineum]
Length = 671
Score = 345 bits (885), Expect = 1e-92
Identities = 171/221 (77%), Positives = 195/221 (88%), Gaps = 1/221 (0%)
Frame = +1
Query: 1 GGKDVKQGLNIFRFANRIPLLFEQGADVVTRTTLKRINWNSYKINQTQDKIGVFVSIVST 180
GG+DVKQG+NIFRFANRIPLLFEQG DVVTRT LKRINWNSYKINQTQDKIGVFVSIVST
Sbjct: 449 GGRDVKQGINIFRFANRIPLLFEQGGDVVTRTALKRINWNSYKINQTQDKIGVFVSIVST 508
Query: 181 KIPFKGTGKEYIGDDISEIASAVKTAIQQCCTQLKSKIVRRIQAREQQERKRNLSKYIPN 360
KIPFKGTGKEYIGDDISEIA+AVK+AIQQCC QLKSKIV+RIQAREQQERKR+LS+YIP+
Sbjct: 509 KIPFKGTGKEYIGDDISEIATAVKSAIQQCCIQLKSKIVKRIQAREQQERKRSLSRYIPD 568
Query: 361 VTGAIYDVLKEMSKMHASKKRRCDAKDGELLKKISSEIITKETLSEKLAQHVEQVDYEMA 540
TGA+YDVLK+M++ H + ++R ++ +L+K+S IITKETL EKLA+HVEQVDYEMA
Sbjct: 569 ATGAVYDVLKQMTEEHTTMRKRYREEETAMLEKVSKSIITKETLKEKLAEHVEQVDYEMA 628
Query: 541 LEYATQSGVNEEPRENFYIQSLEAD-HKFTDFHSPVFVFRL 660
LEYATQSGV+EEPRE Y+Q L + F D HSP FVFRL
Sbjct: 629 LEYATQSGVSEEPRETIYLQHLNPNTSNFIDLHSPTFVFRL 669
>ref|XP_002885404.1| hypothetical protein ARALYDRAFT_318827 [Arabidopsis lyrata subsp.
lyrata] gi|297331244|gb|EFH61663.1| hypothetical protein
ARALYDRAFT_318827 [Arabidopsis lyrata subsp. lyrata]
Length = 691
Score = 339 bits (869), Expect = 1e-90
Identities = 170/221 (76%), Positives = 195/221 (88%), Gaps = 1/221 (0%)
Frame = +1
Query: 1 GGKDVKQGLNIFRFANRIPLLFEQGADVVTRTTLKRINWNSYKINQTQDKIGVFVSIVST 180
GG+D G+NIFRFANRIPLLFEQGADVVTRT LKRINWNSYKINQTQDKIGVFVSIVST
Sbjct: 472 GGRD---GINIFRFANRIPLLFEQGADVVTRTALKRINWNSYKINQTQDKIGVFVSIVST 528
Query: 181 KIPFKGTGKEYIGDDISEIASAVKTAIQQCCTQLKSKIVRRIQAREQQERKRNLSKYIPN 360
KIPFKGTGKEYIGDDISEIA+AVK+AIQQCC QLKSKIV+R+QAREQQERKR+LS+YIP+
Sbjct: 529 KIPFKGTGKEYIGDDISEIATAVKSAIQQCCIQLKSKIVKRLQAREQQERKRSLSRYIPD 588
Query: 361 VTGAIYDVLKEMSKMHASKKRRCDAKDGELLKKISSEIITKETLSEKLAQHVEQVDYEMA 540
TGA+Y+VLK+M++ H +K++R +D +L K+S IITKETL EKLA+HVEQVDYEMA
Sbjct: 589 ATGAVYEVLKQMTEEHTTKRKRYGEEDTVMLNKVSKHIITKETLKEKLAEHVEQVDYEMA 648
Query: 541 LEYATQSGVNEEPRENFYIQSLEAD-HKFTDFHSPVFVFRL 660
LEYATQSGV+EEPREN Y+Q L+ + F D HSP FVFRL
Sbjct: 649 LEYATQSGVSEEPRENIYLQHLDPNKSNFIDLHSPNFVFRL 689
>ref|XP_004295229.1| PREDICTED: DNA topoisomerase 6 subunit B-like [Fragaria vesca subsp.
vesca]
Length = 666
Score = 336 bits (862), Expect = 7e-90
Identities = 169/221 (76%), Positives = 193/221 (87%), Gaps = 1/221 (0%)
Frame = +1
Query: 1 GGKDVKQGLNIFRFANRIPLLFEQGADVVTRTTLKRINWNSYKINQTQDKIGVFVSIVST 180
GGKDVKQGLNIFRFANRIPLLFEQGADVVTRT LKRINW+SYKINQTQDK+GVFVS+VST
Sbjct: 444 GGKDVKQGLNIFRFANRIPLLFEQGADVVTRTALKRINWSSYKINQTQDKVGVFVSVVST 503
Query: 181 KIPFKGTGKEYIGDDISEIASAVKTAIQQCCTQLKSKIVRRIQAREQQERKRNLSKYIPN 360
KIPFKGTGKEYIGDDI+EIASAVK+AIQ CC QLK+KIV+ IQAREQ+ERKRNLSKY N
Sbjct: 504 KIPFKGTGKEYIGDDITEIASAVKSAIQHCCIQLKTKIVKNIQAREQKERKRNLSKYAEN 563
Query: 361 VTGAIYDVLKEMSKMHASKKRRCDAKDGELLKKISSEIITKETLSEKLAQHVEQVDYEMA 540
V GA+ VLK+M ++ ASKKRR D K+ E+LKK+S+ +ITKE + EKL QHVEQVD EMA
Sbjct: 564 VAGAVCGVLKQMQQIQASKKRRYDDKEAEVLKKLSTGMITKEMVKEKLVQHVEQVDSEMA 623
Query: 541 LEYATQSGVNEEPRENFYIQSLE-ADHKFTDFHSPVFVFRL 660
+E+A SGV+EEPRE Y+QSLE A+ F D HSP+FVFRL
Sbjct: 624 MEFAANSGVSEEPRECIYLQSLEAAEDNFIDLHSPLFVFRL 664