BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00011312
         (2107 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transc...   854   0.0  
ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transc...   848   0.0  
ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc...   798   0.0  
emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]   731   0.0  
ref|XP_006452717.1| hypothetical protein CICLE_v10007802mg [Citr...   671   0.0  
ref|XP_006474796.1| PREDICTED: probable RNA polymerase II transc...   668   0.0  
ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [A...   668   0.0  
gb|EOY33211.1| BSD domain (BTF2-like transcription factors, Syna...   657   0.0  
ref|XP_006392607.1| hypothetical protein EUTSA_v10011333mg [Eutr...   649   0.0  
ref|XP_002310512.2| transcription factor-related family protein ...   646   0.0  
ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arab...   642   0.0  
ref|XP_004496077.1| PREDICTED: probable RNA polymerase II transc...   642   0.0  
ref|XP_006307068.1| hypothetical protein CARUB_v10008654mg [Caps...   639   e-180
gb|EMJ24087.1| hypothetical protein PRUPE_ppa003591mg [Prunus pe...   639   e-180
ref|XP_006452718.1| hypothetical protein CICLE_v10007802mg [Citr...   638   e-180
ref|XP_002307021.1| transcription factor-related family protein ...   637   e-180
ref|NP_175971.3| probable RNA polymerase II transcription factor...   636   e-179
ref|XP_002530618.1| TFIIH basal transcription factor complex sub...   634   e-179
gb|ESW16172.1| hypothetical protein PHAVU_007G134900g [Phaseolus...   632   e-178
ref|XP_006589332.1| PREDICTED: probable RNA polymerase II transc...   632   e-178

>ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1-like [Solanum tuberosum]
          Length = 599

 Score =  854 bits (2207), Expect = 0.0
 Identities = 436/598 (72%), Positives = 505/598 (84%), Gaps = 12/598 (2%)
 Frame = -1

Query: 2005 MAD-KVVKRAKYKSSIKDPGIPGVLRLTKERFFFMPNDPSSSPKLNVEFRTIKGFKSSKG 1829
            MAD K+VKRAKYK+S+K PG+PGVL+LTKERF+FMPNDP+ + KLNVEF+ IKG KSSK 
Sbjct: 1    MADGKLVKRAKYKTSVKVPGVPGVLKLTKERFYFMPNDPTLTTKLNVEFKLIKGHKSSKE 60

Query: 1828 -STKQVLLNLTQDQGVNYFFEFENFPDRDVCKEFVAMAIATSRESLQ----------DEQ 1682
             S+KQ LLNLTQ QG NY FEF++FPDRD C++FVA AIA   E  +          DEQ
Sbjct: 61   CSSKQALLNLTQAQGGNYLFEFDSFPDRDQCRDFVASAIAACGEIGKATSEKPAVPHDEQ 120

Query: 1681 LSAAETERRIKLLQENSDLQKLHKQFVIGGILSEAEFWATRKKLLGQNDTRRPKQRVALK 1502
            LSA E  RRIKLLQENS+LQKLH+Q VIGGILSEAEFWA RKKLL Q++ ++PKQRVALK
Sbjct: 121  LSATEMGRRIKLLQENSELQKLHRQLVIGGILSEAEFWAARKKLLEQSENKKPKQRVALK 180

Query: 1501 NDMWSTKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLRFVPSKMTEKEFWTKYSRA 1322
            NDMWS KPLSDGQ+NRVTFNLTPE+IHQIFAEKPAVRQAYL+FVP KM+EKEFWTKYSRA
Sbjct: 181  NDMWSVKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLKFVPGKMSEKEFWTKYSRA 240

Query: 1321 EYLHSTKNVVXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYIHI 1142
            EYLHSTKN+V            AVFLKQDDML +EARRKIRRVDPTLDMEADEGDDY+H+
Sbjct: 241  EYLHSTKNIVAAAAEAAEDEELAVFLKQDDMLVSEARRKIRRVDPTLDMEADEGDDYMHL 300

Query: 1141 QDHGLSRGDSKDVLESQYEPYRRSFSQNLNQHGAVVLQGRLIDVELGDTRTVAEAFARKK 962
             DHGL +G++K++LE QYEP++RSFSQ LNQH AVVL+GR+IDVELGDTR+VAEAF R  
Sbjct: 301  PDHGLPQGETKEILEPQYEPFKRSFSQYLNQHAAVVLRGRVIDVELGDTRSVAEAFTRTY 360

Query: 961  QVELAKELSDVNLEKERSERTSRMAEIDDLQAARDPPVAPLSIKDPRDYFDSQQANALKA 782
            Q E A E+SD N  +ER ++ SR+AEI+DLQ  +DPPVA LSIKDPRDYFDSQQANA+KA
Sbjct: 361  QAEQATEVSDENAYRERVKKVSRVAEIEDLQGPQDPPVALLSIKDPRDYFDSQQANAIKA 420

Query: 781  LGDSGSGGKLLNCSVSTHEAYGSLKEFISEVKTLGITEPLINAEVALKVLNGLTQNISST 602
            LGD+ +G + L  SVS  EA+ SLK+ ISE+ + G+ EP+I+ EVALKV NGL+QNISST
Sbjct: 421  LGDAETGIRQLKFSVSKEEAFCSLKDSISEINSQGLIEPIISPEVALKVFNGLSQNISST 480

Query: 601  KYNLGRNPNESVLDRLPNITKEELLLHWTSIQELLQHFWSSYPITTKYLSTKVTRLKDAM 422
            KY LG+NP+ESVLD+LP+ TK ELLLHWTSIQELL+HFWSSYPITTKY   KVTRLKDAM
Sbjct: 481  KYYLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYAKVTRLKDAM 540

Query: 421  SKIYPKLQEMKESVQSDLRHQVSLLVQPLLQALDAAFAHYDADVQKRSDRSVERANGF 248
            S+IYPKLQE+KESVQSD+RHQVSLLVQP+LQALDAAFAHYDAD+QKRS +S ER NGF
Sbjct: 541  SQIYPKLQEIKESVQSDVRHQVSLLVQPMLQALDAAFAHYDADIQKRSAKSGERPNGF 598


>ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1-like [Solanum lycopersicum]
          Length = 599

 Score =  848 bits (2191), Expect = 0.0
 Identities = 434/598 (72%), Positives = 501/598 (83%), Gaps = 12/598 (2%)
 Frame = -1

Query: 2005 MAD-KVVKRAKYKSSIKDPGIPGVLRLTKERFFFMPNDPSSSPKLNVEFRTIKGFKSSKG 1829
            MAD KVVKRAKYK+S+K PG+PGVL+LTKERF+FMPNDP+ + KLNVEF+ IKG KSSK 
Sbjct: 1    MADGKVVKRAKYKTSVKVPGVPGVLKLTKERFYFMPNDPTLTTKLNVEFKLIKGHKSSKE 60

Query: 1828 -STKQVLLNLTQDQGVNYFFEFENFPDRDVCKEFVAMAIATSRESLQ----------DEQ 1682
             S+KQ LLNLTQ QG NY FEF++FPDRD C++FVA AIA   E  +          DEQ
Sbjct: 61   CSSKQALLNLTQAQGGNYLFEFDSFPDRDQCRDFVASAIAACGEIGKATSEKPAVPHDEQ 120

Query: 1681 LSAAETERRIKLLQENSDLQKLHKQFVIGGILSEAEFWATRKKLLGQNDTRRPKQRVALK 1502
            LSA E  RRIKLLQENS+LQ LH++ VI GILSE EFWA RKKLL Q++ ++PKQRVALK
Sbjct: 121  LSATEMGRRIKLLQENSELQNLHRELVIAGILSETEFWAARKKLLEQSENKKPKQRVALK 180

Query: 1501 NDMWSTKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLRFVPSKMTEKEFWTKYSRA 1322
            NDMWS KPLSDGQ+NRVTFNLTPE+IHQIFAEKPAVRQAYL+FVP KM+EKEFWTKYSRA
Sbjct: 181  NDMWSVKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLKFVPGKMSEKEFWTKYSRA 240

Query: 1321 EYLHSTKNVVXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYIHI 1142
            EYLHSTKN+V            AVFLKQDDML +EARRKIRRVDPTLDMEADEGDDY+H+
Sbjct: 241  EYLHSTKNIVAAAAEAAEDEELAVFLKQDDMLVSEARRKIRRVDPTLDMEADEGDDYMHL 300

Query: 1141 QDHGLSRGDSKDVLESQYEPYRRSFSQNLNQHGAVVLQGRLIDVELGDTRTVAEAFARKK 962
             DHGL +G++K++LE QYEP++RSFSQ LNQH AVVLQGR+IDVELGDTR+VAEAF R  
Sbjct: 301  PDHGLPQGETKEILEPQYEPFKRSFSQYLNQHAAVVLQGRVIDVELGDTRSVAEAFTRTN 360

Query: 961  QVELAKELSDVNLEKERSERTSRMAEIDDLQAARDPPVAPLSIKDPRDYFDSQQANALKA 782
            Q E A E+SD N  +ER ++ SR+AEI+DLQ  RDPPVA LSIKDPRDYFDSQQANA+KA
Sbjct: 361  QAEQATEVSDENAYRERVKKVSRVAEIEDLQGPRDPPVALLSIKDPRDYFDSQQANAIKA 420

Query: 781  LGDSGSGGKLLNCSVSTHEAYGSLKEFISEVKTLGITEPLINAEVALKVLNGLTQNISST 602
            LGD+ +G + L   VS  EA+ SLK+ ISE+ + G+ EP+I+ EVALKV N L+QNISST
Sbjct: 421  LGDAETGIRQLKFRVSKEEAFCSLKDSISEINSQGLIEPIISPEVALKVFNLLSQNISST 480

Query: 601  KYNLGRNPNESVLDRLPNITKEELLLHWTSIQELLQHFWSSYPITTKYLSTKVTRLKDAM 422
            KY+LG+NP+ESVLD+LP+ TK ELLLHWTSIQELL+HFWSSYPITTKY   KVTRLKDAM
Sbjct: 481  KYHLGKNPHESVLDQLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYAKVTRLKDAM 540

Query: 421  SKIYPKLQEMKESVQSDLRHQVSLLVQPLLQALDAAFAHYDADVQKRSDRSVERANGF 248
            S+IYPKLQE+KESVQSD+RHQVSLLVQP+LQALDAAFAHYDAD+QKRS RS ER NGF
Sbjct: 541  SQIYPKLQEIKESVQSDVRHQVSLLVQPMLQALDAAFAHYDADLQKRSARSGERPNGF 598


>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1 [Vitis vinifera] gi|296090002|emb|CBI39821.3| unnamed
            protein product [Vitis vinifera]
          Length = 602

 Score =  798 bits (2061), Expect = 0.0
 Identities = 409/601 (68%), Positives = 487/601 (81%), Gaps = 15/601 (2%)
 Frame = -1

Query: 2005 MADKVVKRAKYKSSIKDPGIPGVLRLTKERFFFMPNDPSSSPKLNVEFRTIKGFKSSKG- 1829
            M+ +V+KRA+YK+S+KD G+ GVL++T+++F FMPNDP+SS + +VEFR IKG K SKG 
Sbjct: 1    MSGEVLKRARYKTSVKDSGVAGVLKMTEDKFVFMPNDPTSSARFDVEFRFIKGHKFSKGG 60

Query: 1828 STKQVLLNLTQD--QGVNYFFEFENFPDRDVCKEFVAMAIATSRES-----------LQD 1688
            S K  LLNLTQD  +G  Y FEFEN+PDR+VC+EFV  A+A   E+           L D
Sbjct: 61   SNKPALLNLTQDSEKGGGYIFEFENYPDREVCREFVGRALAKFSEASKAGSEQSAVKLFD 120

Query: 1687 EQLSAAETERRIKLLQENSDLQKLHKQFVIGGILSEAEFWATRKKLLGQNDTRRPKQRVA 1508
            EQLS  E ERRIKLL+E+S+LQKLHKQFV+ G+L+EAEFWATRKKLL  N +R  KQRV 
Sbjct: 121  EQLSTIEMERRIKLLREDSELQKLHKQFVLSGVLTEAEFWATRKKLLDGNTSRTSKQRVG 180

Query: 1507 LKNDMWST-KPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLRFVPSKMTEKEFWTKY 1331
             K+ M S  KPL+DG++NRVTFNLTPEIIHQIFAEKPAV QA+L FVP+KMTEK+FW KY
Sbjct: 181  FKSAMISDLKPLTDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKY 240

Query: 1330 SRAEYLHSTKNVVXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDY 1151
             RAEYLH T+N V            AVFLK DD+LANEARRKIRRVDPTLDMEAD+GDDY
Sbjct: 241  CRAEYLHCTRNTVAAAAEAAEDEELAVFLKHDDILANEARRKIRRVDPTLDMEADQGDDY 300

Query: 1150 IHIQDHGLSRGDSKDVLESQYEPYRRSFSQNLNQHGAVVLQGRLIDVELGDTRTVAEAFA 971
            +H+ DHG+ R  SK++++ QYE YRR+ SQ+LN+H AVVL+GR IDVEL DTRTVAEA A
Sbjct: 301  MHLPDHGIFRDGSKEIIDPQYEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAEALA 360

Query: 970  RKKQVELAKELSDVNLEKERSERTSRMAEIDDLQAARDPPVAPLSIKDPRDYFDSQQANA 791
            + K+VE A E SD ++ +ER ER SRM EI+DLQA RD P A L IKDPRDYFDSQQANA
Sbjct: 361  KSKRVEAANEKSDGSVTRERLERISRMTEIEDLQAPRDLPFAALCIKDPRDYFDSQQANA 420

Query: 790  LKALGDSGSGGKLLNCSVSTHEAYGSLKEFISEVKTLGITEPLINAEVALKVLNGLTQNI 611
            LK LGD+ +G K + CS+ST EAYGSL+ FISE+K++G+++P++  ++ALKVLNGLTQNI
Sbjct: 421  LKTLGDTLAGSKQIKCSLSTQEAYGSLRGFISEIKSVGLSDPIVKPDIALKVLNGLTQNI 480

Query: 610  SSTKYNLGRNPNESVLDRLPNITKEELLLHWTSIQELLQHFWSSYPITTKYLSTKVTRLK 431
            SSTK++LG+NP ESVLDRLP ITKEELL HWTSIQELL+HFWSSYPITT YL TK +RLK
Sbjct: 481  SSTKFHLGKNPQESVLDRLPIITKEELLHHWTSIQELLRHFWSSYPITTTYLYTKASRLK 540

Query: 430  DAMSKIYPKLQEMKESVQSDLRHQVSLLVQPLLQALDAAFAHYDADVQKRSDRSVERANG 251
            DAMS+IYPKLQE+KESVQSD RHQVSLLVQP+LQALDAAFAHYDAD QKRS RS ER NG
Sbjct: 541  DAMSQIYPKLQEIKESVQSDFRHQVSLLVQPMLQALDAAFAHYDADQQKRSARSGERPNG 600

Query: 250  F 248
            F
Sbjct: 601  F 601


>emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]
          Length = 735

 Score =  731 bits (1887), Expect = 0.0
 Identities = 384/617 (62%), Positives = 464/617 (75%), Gaps = 58/617 (9%)
 Frame = -1

Query: 2005 MADKVVKRAKYKSSIKDPGIPGVLRLTKERFFFMPNDPSSSPKLNVEFRTIKGFKSSKG- 1829
            M+ +V+KRA+YK+S+KD G+ GVL++T+++F FMPNDP+SS + +VEFR IKG K SKG 
Sbjct: 1    MSGEVLKRARYKTSVKDSGVAGVLKMTEDKFVFMPNDPTSSARFDVEFRFIKGHKFSKGG 60

Query: 1828 STKQVLLNLTQD--QGVNYFFEFENFPDRDVCKEFVAMAIATSRES-----------LQD 1688
            S K  LLNLTQD  +G  Y FEFEN+PDR+VC+EFV  A+A   E+           L D
Sbjct: 61   SNKPALLNLTQDSEKGGGYIFEFENYPDREVCREFVGKALAKFSEASKAGSEQSAVKLFD 120

Query: 1687 EQLSAAETERRIKLLQEN------------------------------------------ 1634
            EQLS  E ERRIKLL+E+                                          
Sbjct: 121  EQLSTIEMERRIKLLREDRHSVPEEKFGVLLLKGILPLFGETIIAMKLIDSGIASKVKWD 180

Query: 1633 -SDLQKLHKQFVIGGILSEAEFWATRKKLLGQNDTRRPKQRVALKNDMWST-KPLSDGQS 1460
             S+LQKLHKQFV+ G+L+EAEFWATRKKLL  N +R  KQRV  K+ M S  KPL+DG++
Sbjct: 181  CSELQKLHKQFVLSGVLTEAEFWATRKKLLDGNTSRTSKQRVGFKSAMISDLKPLTDGRT 240

Query: 1459 NRVTFNLTPEIIHQIFAEKPAVRQAYLRFVPSKMTEKEFWTKYSRAEYLHSTKNVVXXXX 1280
            NRVTFNLTPEIIHQIFAEKPAV QA+L FVP+KMTEK+FW KY RAEYLH T+N V    
Sbjct: 241  NRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKYCRAEYLHCTRNTVAAAA 300

Query: 1279 XXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYIHIQDHGLSRGDSKDVL 1100
                    AVFLK DD+LA+EARRKIRRVDPTLDMEAD+GDDY+H+ DHG+ R  SK+++
Sbjct: 301  EAAEDEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYMHLPDHGIFRDGSKEII 360

Query: 1099 ESQYEPYRRSFSQNLNQHGAVVLQGRLIDVELGDTRTVAEAFARKKQVELAKELSDVNLE 920
            + QYE YRR+ SQ+LN+H AVVL+GR IDVEL DTRTVAEA A+ K+VE A E SD ++ 
Sbjct: 361  DPQYEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAEALAKSKRVEAANEKSDGSVT 420

Query: 919  KERSERTSRMAEIDDLQAARDPPVAPLSIKDPRDYFDSQQANALKALGDSGSGGKLLNCS 740
            +ER ER SRM EI+DLQA RD P A L IKDPRDYFDSQQANALK LGD+ +G K + CS
Sbjct: 421  RERLERISRMTEIEDLQAPRDLPFAALCIKDPRDYFDSQQANALKTLGDTLAGSKQIKCS 480

Query: 739  VSTHEAYGSLKEFISEVKTLGITEPLINAEVALKVLNGLTQNISSTKYNLGRNPNESVLD 560
            +S+ EAYGSL+ FISE+K++G+++P++  ++ALKVLNGLTQNISSTK++LG+NP ESVLD
Sbjct: 481  LSSQEAYGSLRGFISEIKSVGLSDPIVKPDIALKVLNGLTQNISSTKFHLGKNPQESVLD 540

Query: 559  RLPNITKEELLLHWTSIQELLQHFWSSYPITTKYLSTKVTRLKDAMSKIYPKLQEMKESV 380
            RLP ITKEELL HWTSIQELL+HFWSSYPITT YL TK +RLKDAMS+IYPKLQE+KESV
Sbjct: 541  RLPIITKEELLHHWTSIQELLRHFWSSYPITTTYLYTKASRLKDAMSQIYPKLQEIKESV 600

Query: 379  QSDLRHQVSLLVQPLLQ 329
            QSD RHQVSLLVQP+LQ
Sbjct: 601  QSDFRHQVSLLVQPMLQ 617


>ref|XP_006452717.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
            gi|557555943|gb|ESR65957.1| hypothetical protein
            CICLE_v10007802mg [Citrus clementina]
          Length = 597

 Score =  671 bits (1731), Expect = 0.0
 Identities = 356/601 (59%), Positives = 449/601 (74%), Gaps = 14/601 (2%)
 Frame = -1

Query: 2008 SMADKVVKRAKYKSSIKDPGIPGVLRLTKERFFFMPNDPSSSPKLNVEFRTIKGFKSSK- 1832
            S A +V KRAKYK S+KDPG  G LR+  ++  FMP++ +S  KL VEF++I+G K +K 
Sbjct: 2    SGAAQVTKRAKYKISVKDPGTTGALRMNDQKLMFMPDNRNSGAKLVVEFKSIQGHKYTKE 61

Query: 1831 GSTKQVLLNLTQDQGVNYFFEFENFPDRDVCKEFVAMAIATSRES-----------LQDE 1685
            GS K  L+NL   QG +Y FEF+++ D  VC++FV+  +  S+E+           L DE
Sbjct: 62   GSNKPPLINLANAQGGSYIFEFDSYSDLHVCRDFVSKVLEKSKETPNAALEKSAVKLPDE 121

Query: 1684 QLSAAETERRIKLLQENSDLQKLHKQFVIGGILSEAEFWATRKKLLGQNDTRRPKQRVAL 1505
            QLS  E + RIKLLQENS+LQKLH+QFV G IL+EAEFWA RKKLL ++ +++ KQRV  
Sbjct: 122  QLSEEEMQLRIKLLQENSELQKLHRQFVGGNILTEAEFWAARKKLLDRDPSKKSKQRVGF 181

Query: 1504 KNDMWST-KPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLRFVPSKMTEKEFWTKYS 1328
            K+ M S  +P +DG++N+VTF+LTPEII QIFAEKPAV +A+L FVP+KMTE EFWTKY 
Sbjct: 182  KSAMISDIRPATDGRTNKVTFSLTPEIILQIFAEKPAVHRAFLNFVPNKMTEMEFWTKYC 241

Query: 1327 RAEYLHSTKNVVXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYI 1148
            RAEYL  TKN              AVFLK+DD+LANE R+KIRRVDPTLDMEADEGDDY 
Sbjct: 242  RAEYLSRTKNYHAVVAEAAEDEELAVFLKEDDILANEVRKKIRRVDPTLDMEADEGDDYT 301

Query: 1147 HIQDHGLSRGDSKDVLESQYEPYRRSFSQNLNQHGAVVLQGRLIDVELGD-TRTVAEAFA 971
            H+ DHG+ R  +K+  E Q E YRR+  Q+LN+H AVVL+GR IDVE  D TR +AEA A
Sbjct: 302  HLPDHGIFRDGTKESNELQSEHYRRTLLQDLNRHAAVVLEGRTIDVEREDSTRALAEALA 361

Query: 970  RKKQVELAKELSDVNLEKERSERTSRMAEIDDLQAARDPPVAPLSIKDPRDYFDSQQANA 791
            R K+     E +D N  +ER +RT R+AEI+DLQA    P+APLSIKD R+YFDSQQAN 
Sbjct: 362  RSKR---GNEGADNNANEERLDRTPRVAEIEDLQAPHCLPLAPLSIKDAREYFDSQQANT 418

Query: 790  LKALGDSGSGGKLLNCSVSTHEAYGSLKEFISEVKTLGITEPLINAEVALKVLNGLTQNI 611
            LKA  DS +  K   CS+S  EAYGS+++ ISE+K +G+++P++N EVALKV +GLT NI
Sbjct: 419  LKASRDSQASMK---CSLSRQEAYGSVRDAISEIKDMGLSDPIVNPEVALKVYSGLTHNI 475

Query: 610  SSTKYNLGRNPNESVLDRLPNITKEELLLHWTSIQELLQHFWSSYPITTKYLSTKVTRLK 431
            SS KY+LG+NP E+VLDRLP+ TKE+LL HW SIQELL+HFWSSYPITT YL +KV RLK
Sbjct: 476  SSIKYHLGKNPRETVLDRLPSATKEKLLYHWMSIQELLKHFWSSYPITTPYLYSKVNRLK 535

Query: 430  DAMSKIYPKLQEMKESVQSDLRHQVSLLVQPLLQALDAAFAHYDADVQKRSDRSVERANG 251
            DA+S IYP+L+EMKES+ +DLRHQVSLLV+P+ QALDAA  HYDAD+QKRS +S E+ NG
Sbjct: 536  DALSNIYPQLEEMKESLPADLRHQVSLLVRPMQQALDAAIQHYDADLQKRSAKSGEKPNG 595

Query: 250  F 248
            +
Sbjct: 596  Y 596


>ref|XP_006474796.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1-like [Citrus sinensis]
          Length = 597

 Score =  668 bits (1724), Expect = 0.0
 Identities = 355/601 (59%), Positives = 448/601 (74%), Gaps = 14/601 (2%)
 Frame = -1

Query: 2008 SMADKVVKRAKYKSSIKDPGIPGVLRLTKERFFFMPNDPSSSPKLNVEFRTIKGFKSSK- 1832
            S A +V KRAKYK S+KDPG PG LR+  ++  FMP++ +S  KL VEF++I+G K +K 
Sbjct: 2    SGAAQVTKRAKYKISVKDPGTPGALRMNDQKLMFMPDNRNSGAKLVVEFKSIQGHKYTKE 61

Query: 1831 GSTKQVLLNLTQDQGVNYFFEFENFPDRDVCKEFVAMAIATSRES-----------LQDE 1685
            GS K  L+NL   QG +Y FEF+++ D  VC++FV+  +  S+E+           L DE
Sbjct: 62   GSNKPPLINLANAQGGSYIFEFDSYADLHVCRDFVSKVLEKSKETPNAALEKSAIKLPDE 121

Query: 1684 QLSAAETERRIKLLQENSDLQKLHKQFVIGGILSEAEFWATRKKLLGQNDTRRPKQRVAL 1505
            QLS  E + RIKLLQENS+LQKLH+QFV G IL+EAEFWA RKKLL  + +++ KQRV  
Sbjct: 122  QLSEEEMQLRIKLLQENSELQKLHRQFVGGNILTEAEFWAARKKLLDIDPSKKSKQRVGF 181

Query: 1504 KNDMWST-KPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLRFVPSKMTEKEFWTKYS 1328
            K+ M S  +P +DG++N+VTF+LTPEII QIFAEKPAV +A+L FVP+KMTE EFWTKY 
Sbjct: 182  KSAMISDIRPATDGRTNKVTFSLTPEIILQIFAEKPAVHRAFLNFVPNKMTEMEFWTKYC 241

Query: 1327 RAEYLHSTKNVVXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYI 1148
            RAEYL  TKN              AVFLK+DD+LANE R+KIRRVDPTLDMEADEGDDY 
Sbjct: 242  RAEYLSRTKNYHAVVAEAAEDEELAVFLKEDDILANEVRKKIRRVDPTLDMEADEGDDYT 301

Query: 1147 HIQDHGLSRGDSKDVLESQYEPYRRSFSQNLNQHGAVVLQGRLIDVELGD-TRTVAEAFA 971
            H+ DHG+ R  +K+  E Q E YRR+  Q+LN+H AVVL+GR IDVE  D TR +AEA A
Sbjct: 302  HLPDHGIFRDGTKESNELQSEHYRRTLLQDLNRHAAVVLEGRTIDVEREDSTRALAEALA 361

Query: 970  RKKQVELAKELSDVNLEKERSERTSRMAEIDDLQAARDPPVAPLSIKDPRDYFDSQQANA 791
            R K+     E +D N  +ER +RT R+AEI+DLQA    P+APLSIKD R+YFDSQQAN 
Sbjct: 362  RSKR---GNEGADNNANEERLDRTPRVAEIEDLQAPHCLPLAPLSIKDAREYFDSQQANT 418

Query: 790  LKALGDSGSGGKLLNCSVSTHEAYGSLKEFISEVKTLGITEPLINAEVALKVLNGLTQNI 611
            LKA  D+ +  K   CS+S  EAY S+++ ISE+K +G+++P++N EVALKV +GLT NI
Sbjct: 419  LKASRDAQASMK---CSLSKQEAYRSVRDAISEIKDMGLSDPIVNPEVALKVYSGLTHNI 475

Query: 610  SSTKYNLGRNPNESVLDRLPNITKEELLLHWTSIQELLQHFWSSYPITTKYLSTKVTRLK 431
            SS KY+LG+NP E+VLDRLP+ TKE+LL HW SIQELL+HFWSSYPITT YL +KV RLK
Sbjct: 476  SSIKYHLGKNPRETVLDRLPSATKEKLLYHWMSIQELLKHFWSSYPITTPYLYSKVNRLK 535

Query: 430  DAMSKIYPKLQEMKESVQSDLRHQVSLLVQPLLQALDAAFAHYDADVQKRSDRSVERANG 251
            DA+S IYP+L+EMKES+ +DLRHQVSLLV+P+ QALDAA  HYDAD+QKRS +S E+ NG
Sbjct: 536  DALSNIYPQLEEMKESLPADLRHQVSLLVRPMQQALDAAIQHYDADLQKRSAKSGEKPNG 595

Query: 250  F 248
            +
Sbjct: 596  Y 596


>ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [Amborella trichopoda]
            gi|548861733|gb|ERN19104.1| hypothetical protein
            AMTR_s00061p00135540 [Amborella trichopoda]
          Length = 626

 Score =  668 bits (1723), Expect = 0.0
 Identities = 348/596 (58%), Positives = 435/596 (72%), Gaps = 18/596 (3%)
 Frame = -1

Query: 1993 VVKRAKYKSS-IKDPGIPGVLRLTKERFFFMPNDPSSSPKLNVEFRTIKGFKSSKGSTKQ 1817
            V  RAKYK+S  KDPG+ GVL +  + F F PNDPSSS KL+V FR IKG K SK  +KQ
Sbjct: 6    VTMRAKYKASGPKDPGVAGVLTMRDDSFIFRPNDPSSSVKLDVSFRCIKGHKFSKEGSKQ 65

Query: 1816 VLLNLTQDQGVNYFFEFENFPDRDVCKEFV----------------AMAIATSRESLQDE 1685
             LLNLTQD+G  Y FEF NF DRDVC++ V                A  +     +  D 
Sbjct: 66   ALLNLTQDKGGGYMFEFANFKDRDVCRDLVGRVLGRLQCLPPSDQSAQVVPAQPTTQHDN 125

Query: 1684 QLSAAETERRIKLLQENSDLQKLHKQFVIGGILSEAEFWATRKKLLGQNDTRRPKQRVAL 1505
            QLS AE E+R+ LL+E+S+LQKLH+Q VIGG+L+E EFWATRK LL     +  KQR   
Sbjct: 126  QLSMAEMEQRMNLLREDSELQKLHRQLVIGGVLTETEFWATRKNLLDDAAHKASKQRAGF 185

Query: 1504 KNDMWS-TKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLRFVPSKMTEKEFWTKYS 1328
            K+ M +  +PL+DG++N+VTF+LTPEIIHQIFAEKPAV QA+L+FVPSKM+E++FWTKY 
Sbjct: 186  KSAMLADVRPLTDGRTNKVTFSLTPEIIHQIFAEKPAVHQAFLKFVPSKMSERDFWTKYC 245

Query: 1327 RAEYLHSTKNVVXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYI 1148
            RAEYLH TKN V            AVFLK DD+LA+EARRKIRRVDPT+DM AD GDDY 
Sbjct: 246  RAEYLHRTKNSVAAAAEAAEDEELAVFLKHDDILASEARRKIRRVDPTVDMAADLGDDYS 305

Query: 1147 HIQDHGLSRGDSKDVLESQYEPYRRSFSQNLNQHGAVVLQGRLIDVELGDTRTVAEAFAR 968
            H+  HG+ R  SK+ ++S+ E  +R+  Q+LN+H AVVL+GR +DVELGDTRTVAEA AR
Sbjct: 306  HLPGHGILRDGSKESVDSESELPKRTLLQDLNRHAAVVLEGRTLDVELGDTRTVAEALAR 365

Query: 967  KKQVELAKELSDVNLEKERSERTSRMAEIDDLQAARDPPVAPLSIKDPRDYFDSQQANAL 788
             KQ E+A E SD    ++R ER S+M EI+DLQA R  P APL IKDPR+YFDSQ+ANA 
Sbjct: 366  SKQAEVATETSDETENQKRLERVSQMTEIEDLQAPRSLPYAPLCIKDPREYFDSQRANAF 425

Query: 787  KALGDSGSGGKLLNCSVSTHEAYGSLKEFISEVKTLGITEPLINAEVALKVLNGLTQNIS 608
            KA GD+GSG     C +ST +AY SL+  I EVK++G  +P++  ++ALKVLN + Q +S
Sbjct: 426  KATGDTGSGVNKDCCHLSTKQAYESLRAQILEVKSVGFKDPIVIPDLALKVLNDVNQQLS 485

Query: 607  STKYNLGRNPNESVLDRLPNITKEELLLHWTSIQELLQHFWSSYPITTKYLSTKVTRLKD 428
            ST   LG+NP  +VLD LP+ TKEELL HWTSIQELL+HFWSSYP+TT +L  KV R+KD
Sbjct: 486  STDPQLGKNPQATVLDMLPHRTKEELLQHWTSIQELLRHFWSSYPLTTTFLHAKVNRVKD 545

Query: 427  AMSKIYPKLQEMKESVQSDLRHQVSLLVQPLLQALDAAFAHYDADVQKRSDRSVER 260
            AM++IY KL E+KESVQS+ RHQVSLLV+P+LQ LD AF HYDA++QKRS +++ +
Sbjct: 546  AMAQIYRKLPEVKESVQSEFRHQVSLLVKPMLQVLDEAFKHYDAEMQKRSTKTMSK 601


>gb|EOY33211.1| BSD domain (BTF2-like transcription factors, Synapse-associated
            proteins and DOS2-like proteins), putative isoform 1
            [Theobroma cacao]
          Length = 646

 Score =  657 bits (1695), Expect = 0.0
 Identities = 353/640 (55%), Positives = 444/640 (69%), Gaps = 58/640 (9%)
 Frame = -1

Query: 1993 VVKRAKYKSSIKDPGIPGVLRLTKERFFFMPNDPSSSPKLNVEFRTIKGFKSSK-GSTKQ 1817
            V KRAKYK++IKDPG PG LR+T E+  F+P++P S+ KL+VEFR IKG K +K GS+K 
Sbjct: 6    VTKRAKYKTTIKDPGTPGTLRMTLEKILFVPHNPKSAGKLDVEFRFIKGQKHTKEGSSKP 65

Query: 1816 VLLNLTQDQGVNYFFEFENFPDRDVCKEFVAMAIATSRE-------SLQDEQLSAAETER 1658
              LNLT +Q  ++ FEFEN+ D   C++FV   +A S E       +  DEQLSAAE E 
Sbjct: 66   PWLNLTNNQNGSFIFEFENYSDLQDCRDFVGKVLAKSGEVSEKPTVTYPDEQLSAAEMEL 125

Query: 1657 RIKLLQENSDLQKLHKQFVIGGILSEAEFWATRKKLLGQNDTRRPKQRVALKNDMWST-K 1481
            RIKLL+E+S+LQKLHKQFV+ G+L+EAEFWATRKKLL +   ++ KQR+  K+ M S  K
Sbjct: 126  RIKLLREDSELQKLHKQFVLSGVLTEAEFWATRKKLLDREANKKTKQRLGFKSAMISDIK 185

Query: 1480 PLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLRFVPSKMTEKEFWTKYSRAEYLHSTK 1301
            P +DG++N+VTFNLTPEII QIFAEKPAV +A+L +VP+KM+E++FWTKY RAEYLHSTK
Sbjct: 186  PSTDGRTNKVTFNLTPEIILQIFAEKPAVHRAFLTYVPNKMSERDFWTKYFRAEYLHSTK 245

Query: 1300 NVVXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYIHIQDHGLSR 1121
            N V            AVFLKQDD+LA+E+R KIRRVDPTLDM+ADEGDDY H+ DHG+ R
Sbjct: 246  NSVAAAAEAAEDEELAVFLKQDDILASESRSKIRRVDPTLDMDADEGDDYTHLPDHGIFR 305

Query: 1120 GDSKDVLESQYEPYRRSFSQNLNQHGAVVLQGRLIDVELGDTRTVAEAFARKKQVELAKE 941
              SK+V ES+ E YRR+ SQ++N+H AVVL+GR +DVEL DTR+VAEA AR KQ    K 
Sbjct: 306  DGSKEVTESENELYRRTLSQDINRHAAVVLEGRAVDVELEDTRSVAEALARSKQESSTKG 365

Query: 940  LSDVNLEKERSERTSRMAEIDDLQAARDPPVAPLSIKDPRDYFDSQQANALKALGDSGSG 761
             S  +  +ER +R SRM EI+DLQA  + P+APL IKDPRDYFDSQQ NAL+  GD  +G
Sbjct: 366  ESYGDTSRERLDRVSRMTEIEDLQAPNNLPLAPLCIKDPRDYFDSQQVNALRTSGDELAG 425

Query: 760  GKLLNCSVSTHEAYGSLKEFISEVKTLGITEPLINAEVALKVLNGLTQNISSTKYNLGRN 581
             + + CS+S+ E YGSL+E IS +K +G+ +P++  EVA +V + LTQ+IS+TKYN+G+N
Sbjct: 426  TEQIKCSLSSQEVYGSLRESISVIKAMGLKDPIVKPEVAHQVFDALTQSISTTKYNIGKN 485

Query: 580  PNESVLDRLPNITKEELLLHWTSIQELLQHFWSSYPITTKYLSTKVTRLKDAMSKIYPKL 401
            P ESVLDRLP   KEELL HWTSI ELL+HFW+SYPITT YL TKV          Y KL
Sbjct: 486  PQESVLDRLPKKIKEELLHHWTSILELLRHFWASYPITTSYLYTKVNAALVLTLLSYQKL 545

Query: 400  Q-------------------------------------------------EMKESVQSDL 368
            +                                                 E+K SV SDL
Sbjct: 546  EAGKQTEGCHVTYLSTARVVLSNYPQVPFISSLLFYLLGSSDAKASYVWMEIKGSVPSDL 605

Query: 367  RHQVSLLVQPLLQALDAAFAHYDADVQKRSDRSVERANGF 248
            RHQVSLL++P+ QALDAA  HY+AD+QKRS RS ER NG+
Sbjct: 606  RHQVSLLIRPMHQALDAAIQHYEADMQKRSARSGERPNGY 645


>ref|XP_006392607.1| hypothetical protein EUTSA_v10011333mg [Eutrema salsugineum]
            gi|557089185|gb|ESQ29893.1| hypothetical protein
            EUTSA_v10011333mg [Eutrema salsugineum]
          Length = 597

 Score =  649 bits (1673), Expect = 0.0
 Identities = 349/596 (58%), Positives = 429/596 (71%), Gaps = 14/596 (2%)
 Frame = -1

Query: 1996 KVVKRAKYKSSIKDPGIPGVLRLTKERFFFMPNDPSSSPKLNVEFRTIKGFKSSK-GSTK 1820
            +V KR +YKSS+KDPG PG LRLT+    F+PNDP S  KL V+   IK  K +K GS K
Sbjct: 6    QVEKRVRYKSSVKDPGTPGFLRLTEAMLLFVPNDPKSDSKLKVQTLNIKSQKYTKEGSNK 65

Query: 1819 QVLLNLTQDQGVNYFFEFENFPDRDVCKEFVAMAIATSRE-------SLQDEQLSAAETE 1661
               LNLT  QG ++ FEFEN+ D   C++F+  A+A   E       S   EQLS AE E
Sbjct: 66   PPWLNLTNKQGKSHIFEFENYSDMHACRDFITKALAKCEEVPKKSAVSTSTEQLSIAELE 125

Query: 1660 RRIKLLQENSDLQKLHKQFVIGGILSEAEFWATRKKLLGQNDTRRPKQRVALKNDMWS-T 1484
             R K+L+ENS+LQ+LHKQFV   +L+E EFWATRKKLLGQ  T + KQ+V LK+ M S  
Sbjct: 126  LRFKVLRENSELQRLHKQFVESKVLTEDEFWATRKKLLGQVSTGKSKQQVGLKSMMVSGI 185

Query: 1483 KPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLRFVPSKMTEKEFWTKYSRAEYLHST 1304
            KP +DG++NRVTFNLT EII QIFAEKPAVRQA++ +VPSKMTEK+FWTKY RAEYL+ST
Sbjct: 186  KPSTDGRTNRVTFNLTSEIIFQIFAEKPAVRQAFINYVPSKMTEKDFWTKYFRAEYLYST 245

Query: 1303 KNVVXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYIHIQDHGLS 1124
            KN              AVFLK D++LA E R+KIRRVDPTLDMEAD+GDDY H+ DHG+ 
Sbjct: 246  KNTAVAAAEAAEDEELAVFLKPDEILARETRQKIRRVDPTLDMEADQGDDYSHLMDHGIQ 305

Query: 1123 RGDSKDVLESQYEPYRRSFSQNLNQHGAVVLQGRLIDVELGDTRTVAEAFARKKQVELAK 944
            R  +KDV+ESQ + +RRS  Q+LN+H AVVL+GR IDVE  DTR VAEA  R KQV  A 
Sbjct: 306  RDGTKDVVESQNDQFRRSLLQDLNRHSAVVLEGRSIDVESEDTRVVAEALTRAKQVSKAD 365

Query: 943  ELSDVNLEKERSERTSRMAEIDDLQAARDPPVAPLSIKDPRDYFDSQQANALKALGDSGS 764
              +  +  ++R ER SR AE++DLQA ++ P+APLSIKDPRDYF+SQQ N L    +   
Sbjct: 366  GETTKDANQDRLERMSRTAEMEDLQAPQNFPLAPLSIKDPRDYFESQQGNVL----NEPR 421

Query: 763  GGKLLNCSVSTHEAYGSLKEFISEVKTLGITEPLINAEVALKVLNGLTQNISSTKYNLGR 584
            G   LN +V  HEAYG LKE I E++T G++ PLI +EV+ +V + LTQ IS+ K  +G+
Sbjct: 422  GAGALNRNV--HEAYGLLKESILEIRTKGLSYPLIKSEVSFEVFSSLTQTISTAKNIIGK 479

Query: 583  NPNESVLDRLPNITKEELLLHWTSIQELLQHFWSSYPITTKYLSTKVTRLKDAMSKIYPK 404
            NP ES LDRLP  TK+E+L HWTSIQELL+HFWSSYPITT YL TKV +LKDAMS  Y +
Sbjct: 480  NPRESFLDRLPKSTKDEVLHHWTSIQELLRHFWSSYPITTTYLHTKVGKLKDAMSNTYSQ 539

Query: 403  LQEMKESVQSDLRHQVSLLVQPLLQALDAAFAHYDADVQKRSDRSV-----ERANG 251
            L  MK+SVQSDLRHQVSLLV+P+ QALDAAF HY+ D+Q+R+ +SV     ER NG
Sbjct: 540  LDAMKQSVQSDLRHQVSLLVRPMQQALDAAFQHYETDLQRRTAKSVGGSSSERPNG 595


>ref|XP_002310512.2| transcription factor-related family protein [Populus trichocarpa]
            gi|550334091|gb|EEE90962.2| transcription factor-related
            family protein [Populus trichocarpa]
          Length = 603

 Score =  646 bits (1667), Expect = 0.0
 Identities = 347/598 (58%), Positives = 437/598 (73%), Gaps = 15/598 (2%)
 Frame = -1

Query: 1996 KVVKRAKYKSSIKDPGIPGVLRLTKERFFFMPNDPSSSPKLNVEFRTIKGFKSSK-GSTK 1820
            +V KR K+KSS+KDPG PG L LT ER  F PN P+S+ KLN+EFR +K  K +K GS K
Sbjct: 5    QVSKRVKFKSSVKDPGTPGRLYLTLERLMFKPNSPNSATKLNMEFRFVKNHKYTKEGSNK 64

Query: 1819 QVLLNLTQDQGVNYFFEFENFPDRDVCKEFVAMAIATSRES--------LQDEQLSAAET 1664
              +LNLT  QGV+Y FEFE++ D  VCKE V  A++ + E+        +  EQ S  E 
Sbjct: 65   APMLNLTSSQGVSYIFEFESYDDLHVCKECVGKALSKTGETPKPIDTSEVPSEQPSTEEL 124

Query: 1663 ERRIKLLQENSDLQKLHKQFVIGGILSEAEFWATRKKLLGQNDTRRPKQRVALKNDMWS- 1487
              R+ +LQENS+LQ LHK+FV  GIL+EAEFWATRKKLLG N +++ KQR  LK+ + S 
Sbjct: 125  LLRMNMLQENSELQNLHKRFVSDGILTEAEFWATRKKLLGGNFSKKSKQRTGLKSFVLSD 184

Query: 1486 TKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLRFVPSKMTEKEFWTKYSRAEYLHS 1307
            TKP +DG++N+VTF LTPEI+ ++FAEKPAV +AYL  VP KM+E++FW+KY RAEYL  
Sbjct: 185  TKPSTDGRTNKVTFTLTPEIVREVFAEKPAVHRAYLDLVPKKMSERDFWSKYCRAEYLQH 244

Query: 1306 TKNV---VXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYIHIQD 1136
             KN                 A+FLK DD+LA+E RRKIR VDPTL+MEADEGDDY H+ D
Sbjct: 245  AKNANAAAAAAAEAAEDEELALFLKPDDILASETRRKIRCVDPTLNMEADEGDDYTHLPD 304

Query: 1135 HGLSRGDSKDVLESQYEPYRRSFSQNLNQHGAVVLQGRLIDVE-LGDTRTVAEAFARKKQ 959
            HG+ R  SK++ ESQ+E Y R+ SQ LN+H AVVLQG  ID E L DT+TVAEA  + KQ
Sbjct: 305  HGIVRDGSKEITESQHELYIRTLSQELNRHAAVVLQGTPIDEEQLKDTQTVAEALKQSKQ 364

Query: 958  VELAK-ELSDVNLEKERSERTSRMAEIDDLQAARDPPVAPLSIKDPRDYFDSQQANALKA 782
             + A  E +D+N  ++R  R S+M EIDDLQA+ D P+APLSIKDPRDYFDSQQA ALK 
Sbjct: 365  GQNASNEETDMNANQDRLSRISKMMEIDDLQASSDLPLAPLSIKDPRDYFDSQQATALKN 424

Query: 781  LGDSGSGGKLLNCSVSTHEAYGSLKEFISEVKTLGITEPLINAEVALKVLNGLTQNISST 602
              D+  G   +   +S  E+Y SL++ IS +KT G+ +P+I  EVA+KVL+ LT NISST
Sbjct: 425  SRDTSIGTDPVKRILSAEESYASLRDSISLIKTTGLVDPIIKPEVAVKVLSVLTHNISST 484

Query: 601  KYNLGRNPNESVLDRLPNITKEELLLHWTSIQELLQHFWSSYPITTKYLSTKVTRLKDAM 422
            KY+ G+N   SVLD LPN  KEELL HWTS+QELL+H+WSSYPITT YL TKV+RLKDAM
Sbjct: 485  KYDTGKNHGLSVLDTLPNTIKEELLYHWTSLQELLKHYWSSYPITTTYLYTKVSRLKDAM 544

Query: 421  SKIYPKLQEMKESVQSDLRHQVSLLVQPLLQALDAAFAHYDADVQKRSDRSVERANGF 248
            SKI  +LQE+KESVQSDLRHQV+LL++P+ QAL+AA  HYDA++QKRS RS +R+NG+
Sbjct: 545  SKIDSQLQELKESVQSDLRHQVTLLLRPMQQALEAAMQHYDAELQKRSARSGDRSNGY 602


>ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arabidopsis lyrata subsp.
            lyrata] gi|297340367|gb|EFH70784.1| hypothetical protein
            ARALYDRAFT_892577 [Arabidopsis lyrata subsp. lyrata]
          Length = 592

 Score =  642 bits (1657), Expect = 0.0
 Identities = 345/593 (58%), Positives = 426/593 (71%), Gaps = 10/593 (1%)
 Frame = -1

Query: 1996 KVVKRAKYKSSIKDPGIPGVLRLTKERFFFMPNDPSSSPKLNVEFRTIKGFKSSKG-STK 1820
            +V KR KYKSS+KDPG PG LR+ +    F+PNDP S  KL V  + IK  K++K  S K
Sbjct: 5    QVEKRVKYKSSVKDPGTPGFLRIREGMLLFVPNDPKSDSKLKVLTQNIKSQKNTKEESNK 64

Query: 1819 QVLLNLTQDQGVNYFFEFENFPDRDVCKEFVAMAIATSRE-------SLQDEQLSAAETE 1661
               LNLT   G ++ FEFEN+PD   C++F+  A+A   E       S   EQLS  E E
Sbjct: 65   PPWLNLTNKLGKSHIFEFENYPDMHACRDFITKALAKCEEEPNKSVVSTSSEQLSIKELE 124

Query: 1660 RRIKLLQENSDLQKLHKQFVIGGILSEAEFWATRKKLLGQNDTRRPKQRVALKNDMWS-T 1484
             R KLL+ENS+LQ+LHKQFV   +L+E EFWATRKKLLG++  R+ KQ+V LK+ M S  
Sbjct: 125  LRFKLLRENSELQRLHKQFVESKVLTEDEFWATRKKLLGKDSIRKSKQQVGLKSMMVSGI 184

Query: 1483 KPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLRFVPSKMTEKEFWTKYSRAEYLHST 1304
            KP +DG++NRVTFNLTPEII QIFAEKPAVRQA++ +VPSKMTEK+FWTKY RAEYL+ST
Sbjct: 185  KPSTDGRTNRVTFNLTPEIIFQIFAEKPAVRQAFINYVPSKMTEKDFWTKYFRAEYLYST 244

Query: 1303 KNVVXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYIHIQDHGLS 1124
            KN              AVFLK D++LA E R+KIRRVDPTLDMEAD+GDDY H+ DHG+ 
Sbjct: 245  KNTAVAAAEAAEDEELAVFLKPDEILARETRQKIRRVDPTLDMEADQGDDYTHLMDHGIQ 304

Query: 1123 RGDSKDVLESQYEPYRRSFSQNLNQHGAVVLQGRLIDVELGDTRTVAEAFARKKQVELAK 944
            R  + DV+E Q + +RRS  Q+LN+H AVVL+GR IDVE  DTR VAEA  R KQV  A 
Sbjct: 305  RDGTMDVVEPQNDQFRRSLLQDLNRHAAVVLEGRSIDVESEDTRIVAEALTRVKQVSKAD 364

Query: 943  ELSDVNLEKERSERTSRMAEIDDLQAARDPPVAPLSIKDPRDYFDSQQANALKALGDSGS 764
              +  +   ER ER SR+A ++DLQA ++ P+APLSIKDPRDYF+SQQ N L        
Sbjct: 365  GETTKDANLERLERMSRLAGMEDLQAPQNFPLAPLSIKDPRDYFESQQGNVLNV----PR 420

Query: 763  GGKLLNCSVSTHEAYGSLKEFISEVKTLGITEPLINAEVALKVLNGLTQNISSTKYNLGR 584
            G K L  +V  HEAYG LKE I E++  G+++PLI  EV+ +V + LT+ IS+ K  +G+
Sbjct: 421  GAKGLKRNV--HEAYGLLKESILEIRATGLSDPLIRPEVSFEVFSSLTRTISTAKNIIGK 478

Query: 583  NPNESVLDRLPNITKEELLLHWTSIQELLQHFWSSYPITTKYLSTKVTRLKDAMSKIYPK 404
            NP ES LDRLP  TK+E+L HWTSIQELL+HFWSSYPITT YL TKV +LKDAMS  Y K
Sbjct: 479  NPRESFLDRLPKSTKDEVLHHWTSIQELLRHFWSSYPITTTYLHTKVGKLKDAMSNTYSK 538

Query: 403  LQEMKESVQSDLRHQVSLLVQPLLQALDAAFAHYDADVQKRSDRS-VERANGF 248
            L+ MKESVQSDLRHQVSLLV+P+ QALDAAF HY+AD+Q+R+ +S  ER NG+
Sbjct: 539  LEAMKESVQSDLRHQVSLLVRPMQQALDAAFQHYEADLQRRTAKSGGERPNGY 591


>ref|XP_004496077.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1-like [Cicer arietinum]
          Length = 586

 Score =  642 bits (1656), Expect = 0.0
 Identities = 335/592 (56%), Positives = 434/592 (73%), Gaps = 5/592 (0%)
 Frame = -1

Query: 2008 SMADKVVKRAKYKSSIKDPGIPGVLRLTKERFFFMPNDPSSSPKLNVEFRTIKGFKSSK- 1832
            S + +VVKRAKYK+++KDPG PGVL+LT+E+  F PNDP+S+ ++ V+FR IK  K +K 
Sbjct: 2    SSSQQVVKRAKYKTTVKDPGTPGVLKLTQEKLVFKPNDPTSNNRVEVDFRLIKNHKHTKE 61

Query: 1831 GSTKQVLLNLTQDQGVNYFFEFENFPDRDVCKEFVAMAIATSRES---LQDEQLSAAETE 1661
            GS K   LNL   QG +Y FE ENF D  VC+E V +A++   E    + DEQLS AE  
Sbjct: 62   GSNKPPWLNLGHSQG-SYIFELENFSDLHVCRELVGIALSKHVEPPKVVSDEQLSPAEMT 120

Query: 1660 RRIKLLQENSDLQKLHKQFVIGGILSEAEFWATRKKLLGQNDTRRPKQRVALKNDM-WST 1484
             RIKLLQE+S LQKLHK  V  G L+E+EFWAT+KKLL Q+++R+ KQR+  KN + + T
Sbjct: 121  LRIKLLQEDSKLQKLHKDLVASGKLTESEFWATKKKLLDQDESRKLKQRIGFKNSLIFDT 180

Query: 1483 KPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLRFVPSKMTEKEFWTKYSRAEYLHST 1304
            KP SDG+ N+V F LTPEI +QIFA KPAV QA+L FVPSKM+E +FW KY +AEY+HST
Sbjct: 181  KPTSDGRINQVKFQLTPEIKYQIFALKPAVHQAFLNFVPSKMSEVDFWNKYFKAEYIHST 240

Query: 1303 KNVVXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYIHIQDHGLS 1124
            KN +            AVFLK D++L NEAR+K+RRVDPTLDMEAD+GDDY H+ DHG+ 
Sbjct: 241  KNTIAAAAEAAEDEDLAVFLKDDEILENEARKKVRRVDPTLDMEADQGDDYTHLPDHGIF 300

Query: 1123 RGDSKDVLESQYEPYRRSFSQNLNQHGAVVLQGRLIDVELGDTRTVAEAFARKKQVELAK 944
            R  SK+  E+Q   YRR+  Q+LN+   VVL+G+ +D+++   RTVAE  AR+KQ     
Sbjct: 301  RDGSKETAEAQNTFYRRTLLQDLNRQSEVVLEGKTLDMDMEHPRTVAEVLARRKQE---- 356

Query: 943  ELSDVNLEKERSERTSRMAEIDDLQAARDPPVAPLSIKDPRDYFDSQQANALKALGDSGS 764
              SD  +E+ER  R S+M +I+DLQA  D   APL IKDPRDYFDSQQ NALK+L DS +
Sbjct: 357  --SDGVIEEERRNRISKMTQIEDLQAQDDHRFAPLCIKDPRDYFDSQQVNALKSLDDSLA 414

Query: 763  GGKLLNCSVSTHEAYGSLKEFISEVKTLGITEPLINAEVALKVLNGLTQNISSTKYNLGR 584
            G + + C++ + EAYGSL+E IS++K +G+ +PL++ EVA KVLNGLT+NISSTK +LG+
Sbjct: 415  GKEQIRCNLGSEEAYGSLRESISKIKAIGLMDPLLSPEVAFKVLNGLTKNISSTKSHLGK 474

Query: 583  NPNESVLDRLPNITKEELLLHWTSIQELLQHFWSSYPITTKYLSTKVTRLKDAMSKIYPK 404
            +  ESVLD LPN TKE+LL HW   QELL+HFWSSYP+TT+ L  K  R+KDA+S+IY K
Sbjct: 475  SSQESVLDILPNTTKEKLLDHWVCSQELLRHFWSSYPVTTQNLVNKTKRMKDAISQIYSK 534

Query: 403  LQEMKESVQSDLRHQVSLLVQPLLQALDAAFAHYDADVQKRSDRSVERANGF 248
            L+E+K S +SDLRHQVSL+V P+ QALDAA  HYDADV+KR+ R   + NG+
Sbjct: 535  LEEIKVSAKSDLRHQVSLVVHPMQQALDAALLHYDADVRKRNARGT-KPNGY 585


>ref|XP_006307068.1| hypothetical protein CARUB_v10008654mg [Capsella rubella]
            gi|482575779|gb|EOA39966.1| hypothetical protein
            CARUB_v10008654mg [Capsella rubella]
          Length = 593

 Score =  639 bits (1648), Expect = e-180
 Identities = 340/594 (57%), Positives = 427/594 (71%), Gaps = 11/594 (1%)
 Frame = -1

Query: 1996 KVVKRAKYKSSIKDPGIPGVLRLTKERFFFMPNDPSSSPKLNVEFRTIKGFKSSK-GSTK 1820
            +V KR KYKSS+KDPG  G LR+ +    F+P+DP S  KL V+ + IK  K +K GS K
Sbjct: 5    QVEKRVKYKSSVKDPGTSGFLRIKEAMLLFVPDDPKSDSKLKVQTQNIKSQKYTKEGSQK 64

Query: 1819 QVLLNLTQDQGVNYFFEFENFPDRDVCKEFVAMAIATSRES-------LQDEQLSAAETE 1661
               LNLT  QG ++ FEF N+PD   C++F+  A+A   E           EQLS  E E
Sbjct: 65   PAWLNLTNKQGRSHIFEFGNYPDMHACRDFITKALAKCEEEPNKPAVPASTEQLSIRELE 124

Query: 1660 RRIKLLQENSDLQKLHKQFVIGGILSEAEFWATRKKLLGQNDTRRPKQRVALKNDMWS-T 1484
             R KLL+ENS+LQ+LHKQFV   +L+E EFWATRKKLLG++  R+ KQ++ LK+ M S  
Sbjct: 125  LRFKLLKENSELQRLHKQFVESKVLTEDEFWATRKKLLGKDSIRKSKQQLGLKSMMVSGI 184

Query: 1483 KPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLRFVPSKMTEKEFWTKYSRAEYLHST 1304
            KP +DG++NRVTFNLTPEII QIFAEKPAVRQA++ +VPSKMTEK+FWTKY RAEYL+ST
Sbjct: 185  KPSTDGRTNRVTFNLTPEIIFQIFAEKPAVRQAFISYVPSKMTEKDFWTKYFRAEYLYST 244

Query: 1303 KNVVXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYIHIQDHGLS 1124
            KN              AVFLK D++LA E R+KIRRVDPTLDMEADEGDDY H+ DHG+ 
Sbjct: 245  KNTAVAAAEAAEDEELAVFLKPDEILARETRQKIRRVDPTLDMEADEGDDYTHLMDHGIQ 304

Query: 1123 RGDSKDVLESQYEPYRRSFSQNLNQHGAVVLQGRLIDVELGDTRTVAEAFARKKQVELAK 944
            R  ++DV+E Q E ++RS  Q+LN+H AVVL+GR IDV+  DTR VAEA  R KQV  A 
Sbjct: 305  RDGTRDVVEPQNEQFKRSLLQDLNRHAAVVLEGRSIDVDSEDTRIVAEALTRVKQVSKAD 364

Query: 943  ELSDVNLEKERSERTSRMAEIDDLQAARDPPVAPLSIKDPRDYFDSQQANALKALGDSGS 764
              +  +  +ER ER SR+A ++DLQA ++ P+APLSIKDPRDYF+SQQ N L A    G+
Sbjct: 365  GETGKDANQERLERMSRVAGMEDLQAPQNFPLAPLSIKDPRDYFESQQGNVLNA--PRGT 422

Query: 763  GGKLLNCSVSTHEAYGSLKEFISEVKTLGITEPLINAEVALKVLNGLTQNISSTKYNLGR 584
             G   N     HEA+G LKE I E++  G+++PLI  EV+ +V + LT+ IS+ K  +G+
Sbjct: 423  KGLKRN----VHEAFGLLKESIVEIRARGLSDPLIKPEVSFEVFSSLTRTISTAKNIIGK 478

Query: 583  NPNESVLDRLPNITKEELLLHWTSIQELLQHFWSSYPITTKYLSTKVTRLKDAMSKIYPK 404
            NP ES LDRLP  TK+E+L HWTSIQELL+HFWSSYPITT YL TKV +LKDAMS  Y K
Sbjct: 479  NPRESFLDRLPKSTKDEVLHHWTSIQELLRHFWSSYPITTTYLHTKVGKLKDAMSNTYSK 538

Query: 403  LQEMKESVQSDLRHQVSLLVQPLLQALDAAFAHYDADVQKRSDRSV--ERANGF 248
            L+ MKESVQSDLRHQ+SLLV+P+ QALDAAF HY+AD+Q+R+ +S   ER NG+
Sbjct: 539  LEAMKESVQSDLRHQISLLVRPMQQALDAAFQHYEADLQRRTAKSSGGERPNGY 592


>gb|EMJ24087.1| hypothetical protein PRUPE_ppa003591mg [Prunus persica]
          Length = 563

 Score =  639 bits (1647), Expect = e-180
 Identities = 343/580 (59%), Positives = 420/580 (72%), Gaps = 4/580 (0%)
 Frame = -1

Query: 1996 KVVKRAKYKSSIKDPGIPGVLRLTKERFFFMPNDPSSSPKLNVEFRTIKGFKSSKGSTKQ 1817
            +VVKRA YKS IKDPG PGVL +T+ +F F PNDPSS+ KL+VEF+ I G   +K     
Sbjct: 5    QVVKRASYKSKIKDPGTPGVLTMTENKFVFRPNDPSSAAKLDVEFKHITGNALAKSGEAA 64

Query: 1816 VLLNLTQDQGVNYFFEFENFPDRDVCKEFVAMAIATSRES---LQDEQLSAAETERRIKL 1646
               +  +                       + A  TS +S   L DEQLS AE + R+KL
Sbjct: 65   KASSAAKP---------------------TSAAKTTSEKSGVTLPDEQLSTAEMQLRMKL 103

Query: 1645 LQENSDLQKLHKQFVIGGILSEAEFWATRKKLLGQNDTRRPKQRVALKNDM-WSTKPLSD 1469
            LQE+S+LQKLH QFVI G+L+E+EFWATRKKLL  +   + KQRV  ++ M   TKP++D
Sbjct: 104  LQEDSELQKLHMQFVISGVLTESEFWATRKKLLDGDSRTKSKQRVGFRSSMILDTKPMTD 163

Query: 1468 GQSNRVTFNLTPEIIHQIFAEKPAVRQAYLRFVPSKMTEKEFWTKYSRAEYLHSTKNVVX 1289
            G+ N+VTFNLTPEI +QIFA KPAV QA+L  VPSKMTEK+FWTKY RAEYLHST+N V 
Sbjct: 164  GRMNKVTFNLTPEIKYQIFALKPAVHQAFLTLVPSKMTEKDFWTKYFRAEYLHSTRNAVA 223

Query: 1288 XXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYIHIQDHGLSRGDSK 1109
                       A+FLK+D +LA+EARRKIRRVDPTLDMEAD+GDDY H+ DHG+ R  SK
Sbjct: 224  AAAEAAEDEELAIFLKEDAILASEARRKIRRVDPTLDMEADQGDDYTHLPDHGIFRDGSK 283

Query: 1108 DVLESQYEPYRRSFSQNLNQHGAVVLQGRLIDVELGDTRTVAEAFARKKQVELAKELSDV 929
            DV E Q E YRR+ SQ+LN+ GAVVLQGR +DV+L D RTVAEA  + ++       SD 
Sbjct: 284  DVTELQNELYRRTLSQDLNRQGAVVLQGRTVDVDLEDPRTVAEALMQSRRE------SDE 337

Query: 928  NLEKERSERTSRMAEIDDLQAARDPPVAPLSIKDPRDYFDSQQANALKALGDSGSGGKLL 749
            + E+ER +R +RM EI+DLQ   D PVA L IKDPRDYFD+QQ NALK L DS +G +  
Sbjct: 338  SAEQERLDRITRMTEIEDLQEHHDHPVAQLCIKDPRDYFDTQQVNALKTLDDSRTGTEQK 397

Query: 748  NCSVSTHEAYGSLKEFISEVKTLGITEPLINAEVALKVLNGLTQNISSTKYNLGRNPNES 569
             CS++T EAYGSL+E IS++K++G+    +  E+A+ VLNGLTQNISSTKY LG+NP +S
Sbjct: 398  KCSLTTEEAYGSLREAISKIKSIGLKNSTVAPEIAITVLNGLTQNISSTKYQLGKNPQDS 457

Query: 568  VLDRLPNITKEELLLHWTSIQELLQHFWSSYPITTKYLSTKVTRLKDAMSKIYPKLQEMK 389
            VLD LPN TKEELL HW SIQELL+HFWSSYPITT YLSTKV RLKDAMS+IY +L+E+K
Sbjct: 458  VLDSLPNKTKEELLHHWISIQELLRHFWSSYPITTTYLSTKVGRLKDAMSQIYRQLEEIK 517

Query: 388  ESVQSDLRHQVSLLVQPLLQALDAAFAHYDADVQKRSDRS 269
               QSD RHQVSLLV+P+ QALDAAF H+DAD+QKR+ RS
Sbjct: 518  ---QSDFRHQVSLLVRPMHQALDAAFQHFDADLQKRAARS 554


>ref|XP_006452718.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
            gi|557555944|gb|ESR65958.1| hypothetical protein
            CICLE_v10007802mg [Citrus clementina]
          Length = 564

 Score =  638 bits (1645), Expect = e-180
 Identities = 339/568 (59%), Positives = 427/568 (75%), Gaps = 14/568 (2%)
 Frame = -1

Query: 1909 FMPNDPSSSPKLNVEFRTIKGFKSSK-GSTKQVLLNLTQDQGVNYFFEFENFPDRDVCKE 1733
            FMP++ +S  KL VEF++I+G K +K GS K  L+NL   QG +Y FEF+++ D  VC++
Sbjct: 2    FMPDNRNSGAKLVVEFKSIQGHKYTKEGSNKPPLINLANAQGGSYIFEFDSYSDLHVCRD 61

Query: 1732 FVAMAIATSRES-----------LQDEQLSAAETERRIKLLQENSDLQKLHKQFVIGGIL 1586
            FV+  +  S+E+           L DEQLS  E + RIKLLQENS+LQKLH+QFV G IL
Sbjct: 62   FVSKVLEKSKETPNAALEKSAVKLPDEQLSEEEMQLRIKLLQENSELQKLHRQFVGGNIL 121

Query: 1585 SEAEFWATRKKLLGQNDTRRPKQRVALKNDMWST-KPLSDGQSNRVTFNLTPEIIHQIFA 1409
            +EAEFWA RKKLL ++ +++ KQRV  K+ M S  +P +DG++N+VTF+LTPEII QIFA
Sbjct: 122  TEAEFWAARKKLLDRDPSKKSKQRVGFKSAMISDIRPATDGRTNKVTFSLTPEIILQIFA 181

Query: 1408 EKPAVRQAYLRFVPSKMTEKEFWTKYSRAEYLHSTKNVVXXXXXXXXXXXXAVFLKQDDM 1229
            EKPAV +A+L FVP+KMTE EFWTKY RAEYL  TKN              AVFLK+DD+
Sbjct: 182  EKPAVHRAFLNFVPNKMTEMEFWTKYCRAEYLSRTKNYHAVVAEAAEDEELAVFLKEDDI 241

Query: 1228 LANEARRKIRRVDPTLDMEADEGDDYIHIQDHGLSRGDSKDVLESQYEPYRRSFSQNLNQ 1049
            LANE R+KIRRVDPTLDMEADEGDDY H+ DHG+ R  +K+  E Q E YRR+  Q+LN+
Sbjct: 242  LANEVRKKIRRVDPTLDMEADEGDDYTHLPDHGIFRDGTKESNELQSEHYRRTLLQDLNR 301

Query: 1048 HGAVVLQGRLIDVELGD-TRTVAEAFARKKQVELAKELSDVNLEKERSERTSRMAEIDDL 872
            H AVVL+GR IDVE  D TR +AEA AR K+     E +D N  +ER +RT R+AEI+DL
Sbjct: 302  HAAVVLEGRTIDVEREDSTRALAEALARSKR---GNEGADNNANEERLDRTPRVAEIEDL 358

Query: 871  QAARDPPVAPLSIKDPRDYFDSQQANALKALGDSGSGGKLLNCSVSTHEAYGSLKEFISE 692
            QA    P+APLSIKD R+YFDSQQAN LKA  DS +  K   CS+S  EAYGS+++ ISE
Sbjct: 359  QAPHCLPLAPLSIKDAREYFDSQQANTLKASRDSQASMK---CSLSRQEAYGSVRDAISE 415

Query: 691  VKTLGITEPLINAEVALKVLNGLTQNISSTKYNLGRNPNESVLDRLPNITKEELLLHWTS 512
            +K +G+++P++N EVALKV +GLT NISS KY+LG+NP E+VLDRLP+ TKE+LL HW S
Sbjct: 416  IKDMGLSDPIVNPEVALKVYSGLTHNISSIKYHLGKNPRETVLDRLPSATKEKLLYHWMS 475

Query: 511  IQELLQHFWSSYPITTKYLSTKVTRLKDAMSKIYPKLQEMKESVQSDLRHQVSLLVQPLL 332
            IQELL+HFWSSYPITT YL +KV RLKDA+S IYP+L+EMKES+ +DLRHQVSLLV+P+ 
Sbjct: 476  IQELLKHFWSSYPITTPYLYSKVNRLKDALSNIYPQLEEMKESLPADLRHQVSLLVRPMQ 535

Query: 331  QALDAAFAHYDADVQKRSDRSVERANGF 248
            QALDAA  HYDAD+QKRS +S E+ NG+
Sbjct: 536  QALDAAIQHYDADLQKRSAKSGEKPNGY 563


>ref|XP_002307021.1| transcription factor-related family protein [Populus trichocarpa]
            gi|222856470|gb|EEE94017.1| transcription factor-related
            family protein [Populus trichocarpa]
          Length = 586

 Score =  637 bits (1644), Expect = e-180
 Identities = 339/587 (57%), Positives = 424/587 (72%), Gaps = 14/587 (2%)
 Frame = -1

Query: 1996 KVVKRAKYKSSIKDPGIPGVLRLTKERFFFMPNDPSSSPKLNVEFRTIKGFKSSK-GSTK 1820
            +V KR KYKSS+KD G PG L LT ER  F PN P+S+ KLN+EFR IK  + +K GS K
Sbjct: 5    QVSKRVKYKSSVKDAGTPGRLFLTLERLMFKPNSPNSATKLNMEFRFIKNHRYTKEGSNK 64

Query: 1819 QVLLNLTQDQGVNYFFEFENFPDRDVCKEFVAMAIATSRES--------LQDEQLSAAET 1664
              +LNLT  QG+NY FEFE++ D  VCKE V  A++ + E+        +  EQ S  E 
Sbjct: 65   APMLNLTSSQGMNYIFEFESYDDLHVCKECVGKALSKTGETPKPVDTSEVPSEQPSTEEL 124

Query: 1663 ERRIKLLQENSDLQKLHKQFVIGGILSEAEFWATRKKLLGQNDTRRPKQRVALKNDMWS- 1487
              R+ +L+ENS+LQKLHK+FV  G+L+EAEFWATRKKLLG N +++ KQR  LK+ M S 
Sbjct: 125  LSRMNMLRENSELQKLHKRFVSDGVLTEAEFWATRKKLLGGNTSKKSKQRTGLKSVMLSD 184

Query: 1486 TKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLRFVPSKMTEKEFWTKYSRAEYLHS 1307
            TKP +DG++N+VTF LTPEI+ +IFAEKPAV QAYL  VP KM+E++FW+KY RAEYL  
Sbjct: 185  TKPSTDGRTNKVTFTLTPEIVREIFAEKPAVHQAYLTLVPKKMSERDFWSKYCRAEYLQH 244

Query: 1306 TKNV---VXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYIHIQD 1136
             KN                 A+FLK D++LA+E R KIR VDPTLDMEADEGDDY H+ D
Sbjct: 245  AKNANAAAAAAAEAAEDEELALFLKPDNILASETRWKIRGVDPTLDMEADEGDDYTHLPD 304

Query: 1135 HGLSRGDSKDVLESQYEPYRRSFSQNLNQHGAVVLQGRLIDVE-LGDTRTVAEAFARKKQ 959
            HG+ R  SK++ E Q+E  RR+ SQ+LN+H AVVLQG  ID E L DT+TVAEA  R KQ
Sbjct: 305  HGIVRDGSKEITELQHELCRRTLSQDLNRHAAVVLQGTPIDEEQLKDTQTVAEALERSKQ 364

Query: 958  VELAKELSDVNLEKERSERTSRMAEIDDLQAARDPPVAPLSIKDPRDYFDSQQANALKAL 779
                   +D+N  ++R  R  +M EIDDLQA+ D P+APLSIKDPRDYFDSQQA+ALK  
Sbjct: 365  E------ADINANQDRLSRNLKMMEIDDLQASIDLPLAPLSIKDPRDYFDSQQASALKTS 418

Query: 778  GDSGSGGKLLNCSVSTHEAYGSLKEFISEVKTLGITEPLINAEVALKVLNGLTQNISSTK 599
             D+  G   + C++S  E+Y SL++ IS +K  G+ +P++  EVA KVL  LT NISSTK
Sbjct: 419  RDTSIGNDPVRCTLSVEESYASLRDSISHIKNTGLVDPMVTPEVAAKVLLVLTHNISSTK 478

Query: 598  YNLGRNPNESVLDRLPNITKEELLLHWTSIQELLQHFWSSYPITTKYLSTKVTRLKDAMS 419
            Y+LG+NP  SVLD LPN  KEEL+ HWTS+QELL+H+WSSYPITT YL  KV+RLKDAMS
Sbjct: 479  YDLGKNPGLSVLDTLPNSIKEELMYHWTSLQELLRHYWSSYPITTMYLYNKVSRLKDAMS 538

Query: 418  KIYPKLQEMKESVQSDLRHQVSLLVQPLLQALDAAFAHYDADVQKRS 278
            KI  +LQE+KESVQSDLRHQV+LL++P+ QAL+ A  HYDAD+QKRS
Sbjct: 539  KIDSQLQELKESVQSDLRHQVTLLIRPMQQALEVAMQHYDADMQKRS 585


>ref|NP_175971.3| probable RNA polymerase II transcription factor B subunit 1-1
            [Arabidopsis thaliana]
            gi|122215373|sp|Q3ECP0.1|TFB1A_ARATH RecName:
            Full=Probable RNA polymerase II transcription factor B
            subunit 1-1; AltName: Full=General transcription and DNA
            repair factor IIH subunit TFB1-1; Short=AtTFB1-1;
            Short=TFIIH subunit TFB1-1 gi|110741140|dbj|BAE98663.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|332195172|gb|AEE33293.1| probable RNA polymerase II
            transcription factor B subunit 1-1 [Arabidopsis thaliana]
          Length = 591

 Score =  636 bits (1641), Expect = e-179
 Identities = 339/592 (57%), Positives = 423/592 (71%), Gaps = 9/592 (1%)
 Frame = -1

Query: 1996 KVVKRAKYKSSIKDPGIPGVLRLTKERFFFMPNDPSSSPKLNVEFRTIKGFKSSK-GSTK 1820
            ++ K  KYKS++KDPG PG LR+ +    F+PNDP S  KL V  + IK  K +K GS K
Sbjct: 5    QIEKLVKYKSTVKDPGTPGFLRIREGMLLFVPNDPKSDSKLKVLTQNIKSQKYTKEGSNK 64

Query: 1819 QVLLNLTQDQGVNYFFEFENFPDRDVCKEFVAMAIAT-------SRESLQDEQLSAAETE 1661
               LNLT  Q  ++ FEFEN+PD   C++F+  A+A        S  S   EQLS  E E
Sbjct: 65   PPWLNLTNKQAKSHIFEFENYPDMHACRDFITKALAKCELEPNKSVVSTSSEQLSIKELE 124

Query: 1660 RRIKLLQENSDLQKLHKQFVIGGILSEAEFWATRKKLLGQNDTRRPKQRVALKNDMWS-T 1484
             R KLL+ENS+LQ+LHKQFV   +L+E EFWATRKKLLG++  R+ KQ++ LK+ M S  
Sbjct: 125  LRFKLLRENSELQRLHKQFVESKVLTEDEFWATRKKLLGKDSIRKSKQQLGLKSMMVSGI 184

Query: 1483 KPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLRFVPSKMTEKEFWTKYSRAEYLHST 1304
            KP +DG++NRVTFNLTPEII QIFAEKPAVRQA++ +VPSKMTEK+FWTKY RAEYL+ST
Sbjct: 185  KPSTDGRTNRVTFNLTPEIIFQIFAEKPAVRQAFINYVPSKMTEKDFWTKYFRAEYLYST 244

Query: 1303 KNVVXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYIHIQDHGLS 1124
            KN              AVFLK D++LA E R KIRRVDPTLDMEAD+GDDY H+ DHG+ 
Sbjct: 245  KNTAVAAAEAAEDEELAVFLKPDEILARETRHKIRRVDPTLDMEADQGDDYTHLMDHGIQ 304

Query: 1123 RGDSKDVLESQYEPYRRSFSQNLNQHGAVVLQGRLIDVELGDTRTVAEAFARKKQVELAK 944
            R  + DV+E Q + ++RS  Q+LN+H AVVL+GR IDVE  DTR VAEA  R KQV  A 
Sbjct: 305  RDGTMDVVEPQNDQFKRSLLQDLNRHAAVVLEGRSIDVESEDTRIVAEALTRVKQVSKAD 364

Query: 943  ELSDVNLEKERSERTSRMAEIDDLQAARDPPVAPLSIKDPRDYFDSQQANALKALGDSGS 764
              +  +  +ER ER SR+A ++DLQA ++ P+APLSIKDPRDYF+SQQ N L        
Sbjct: 365  GETTKDANQERLERMSRVAGMEDLQAPQNFPLAPLSIKDPRDYFESQQGNVLNV----PR 420

Query: 763  GGKLLNCSVSTHEAYGSLKEFISEVKTLGITEPLINAEVALKVLNGLTQNISSTKYNLGR 584
            G K L  +V  HEAYG LKE I E++  G+++PLI  EV+ +V + LT+ I++ K   G+
Sbjct: 421  GAKGLKRNV--HEAYGLLKESILEIRATGLSDPLIKPEVSFEVFSSLTRTIATAKNINGK 478

Query: 583  NPNESVLDRLPNITKEELLLHWTSIQELLQHFWSSYPITTKYLSTKVTRLKDAMSKIYPK 404
            NP ES LDRLP  TK+E+L HWTSIQELL+HFWSSYPITT YL TKV +LKDAMS  Y K
Sbjct: 479  NPRESFLDRLPKSTKDEVLHHWTSIQELLKHFWSSYPITTTYLHTKVGKLKDAMSNTYSK 538

Query: 403  LQEMKESVQSDLRHQVSLLVQPLLQALDAAFAHYDADVQKRSDRSVERANGF 248
            L+ MKESVQSDLRHQVSLLV+P+ QALDAAF HY+ D+Q+R+ +S ER NG+
Sbjct: 539  LEAMKESVQSDLRHQVSLLVRPMQQALDAAFHHYEVDLQRRTAKSGERPNGY 590


>ref|XP_002530618.1| TFIIH basal transcription factor complex subunit, putative [Ricinus
            communis] gi|223529828|gb|EEF31761.1| TFIIH basal
            transcription factor complex subunit, putative [Ricinus
            communis]
          Length = 597

 Score =  634 bits (1634), Expect = e-179
 Identities = 336/599 (56%), Positives = 435/599 (72%), Gaps = 13/599 (2%)
 Frame = -1

Query: 2005 MADK-VVKRAKYKSSIKDPGIPGVLRLTKERFFFMPNDPSSSPKLNVEFRTIKGFKSSKG 1829
            MA K V KR KYK+S+KDPG PG L LT E+  F PN+P+S+ KL+++F+ +   K++K 
Sbjct: 1    MASKQVTKRVKYKTSLKDPGTPGRLLLTMEKLAFRPNNPNSASKLDMDFKYVTNHKNTKE 60

Query: 1828 STKQVLLNLTQDQGVNYFFEFENFPDRDVCKEFVAMAIATSRES--------LQDEQLSA 1673
             + + +LNLT +QGV+Y FEFEN  D  +CKE V  A++   ++        +  +Q S 
Sbjct: 61   GSAKAMLNLTSNQGVSYIFEFENHDDLRICKEIVGKALSKLGDTPKPPDAPEVPSDQPST 120

Query: 1672 AETERRIKLLQENSDLQKLHKQFVIGGILSEAEFWATRKKLLGQNDTRRPKQRVALKNDM 1493
             E   R+ LL+EN +LQKLHKQFV   +L+++EFWATRKKLL    +R+ KQRV LK+ M
Sbjct: 121  EELLLRMNLLRENLELQKLHKQFVSDRVLTDSEFWATRKKLLNGEFSRKSKQRVGLKSVM 180

Query: 1492 WS-TKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLRFVPSKMTEKEFWTKYSRAEY 1316
             + +KPL DGQ+N+VTFNLTPEI+ +IFAEKPAV QAYL  VP+KM+E++FWTKY RAEY
Sbjct: 181  LADSKPLIDGQTNKVTFNLTPEIVREIFAEKPAVHQAYLSLVPNKMSERDFWTKYCRAEY 240

Query: 1315 LHSTKNVVXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYIHIQD 1136
            L  ++N+             A+FLK DD+LA+E R+KIR VDPTLDMEAD+GDDY H+ D
Sbjct: 241  LQRSRNIHAAAAEAAEDEELALFLKPDDILASETRQKIRCVDPTLDMEADQGDDYTHLPD 300

Query: 1135 HGLSRGDSKDVLESQYEPYRRSFSQNLNQHGAVVLQGRLIDVE-LGDTRTVAEAFARKKQ 959
            HG+ R  SKDV+ESQ+EPYRR+  Q+LN+H AVVL+G  ID E L DT+ VA+A AR K+
Sbjct: 301  HGIVRDGSKDVIESQHEPYRRTLLQDLNRHAAVVLEGTAIDDEQLQDTKAVADALARSKR 360

Query: 958  -VELAKELSDVNLEKERSERTSRMAEIDDLQAARDPPVAPLSIKDPRDYFDSQQANALKA 782
             ++     +D N  +ERS R S+M EI+DLQ + D  +APL IKDPRDYFDSQQA+ALK 
Sbjct: 361  GIKTINREADGNANQERSNRISQMMEIEDLQGSNDHHLAPLCIKDPRDYFDSQQASALKN 420

Query: 781  LGDSGSGGKLLNCSVSTHEAYGSLKEFISEVKTLGITEPLINAEVALKVLNGLTQNISST 602
              D  SG +   CS+S+ EAY SL++ I++ K +G+ +P++  E+A KVL+ LT NISST
Sbjct: 421  SRDIPSGTEAARCSLSSQEAYASLRDSITQTKAMGLNDPIVKPEIATKVLSILTHNISST 480

Query: 601  KYNLGRNPNESVLDRLPNITKEELLLHWTSIQELLQHFWSSYPITTKYLSTKVTRLKDAM 422
            KY+LG+N  ESVLDRLPN  KEELL HW SI+ELL+H+WSSYPITT YL  KV+RLKDAM
Sbjct: 481  KYHLGKNSRESVLDRLPNTIKEELLHHWMSIEELLRHYWSSYPITTAYLYAKVSRLKDAM 540

Query: 421  SKIYPKLQEMKESVQSDLR-HQVSLLVQPLLQALDAAFAHYDADVQKRSDRSVERANGF 248
            SKI  +LQEMKESVQSDL  H  SL + P   AL+AA  HYDAD+QKRS +S ER NG+
Sbjct: 541  SKIDSQLQEMKESVQSDLXFHATSLGIVP---ALEAAMQHYDADLQKRSAKSAERPNGY 596


>gb|ESW16172.1| hypothetical protein PHAVU_007G134900g [Phaseolus vulgaris]
          Length = 588

 Score =  632 bits (1631), Expect = e-178
 Identities = 330/590 (55%), Positives = 435/590 (73%), Gaps = 7/590 (1%)
 Frame = -1

Query: 1996 KVVKRAKYKSSIKDPGIPGVLRLTKERFFFMPNDPSSSPKLNVEFRTIKGFKSSK-GSTK 1820
            +VVKR KYK+++KDPG  GVL+LT+E+F F PNDP+S+ KL+VEFR IK  K +K GS K
Sbjct: 5    QVVKRVKYKATVKDPGTSGVLKLTQEKFVFKPNDPTSNNKLDVEFRFIKSHKHTKEGSGK 64

Query: 1819 QVLLNLTQDQGVNYFFEFENFPDRDVCKEFVAMAIAT-----SRESLQDEQLSAAETERR 1655
               LNLT  QG +Y FE ++F D  VC+E V +A++      + + + +EQLS+AE   R
Sbjct: 65   PPWLNLTHAQG-SYIFELDSFADLHVCRELVGIALSKHVQGEATKVISEEQLSSAEMTLR 123

Query: 1654 IKLLQENSDLQKLHKQFVIGGILSEAEFWATRKKLLGQNDTRRPKQRVALKNDM-WSTKP 1478
            IKLLQE+S LQ+LHK+ V  G L+E+EFWAT+KKLL Q+++R+ KQR+  KN + + TKP
Sbjct: 124  IKLLQEDSKLQRLHKELVASGKLTESEFWATKKKLLDQDESRKLKQRIGFKNSLIFDTKP 183

Query: 1477 LSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLRFVPSKMTEKEFWTKYSRAEYLHSTKN 1298
            +SDG+ N+V F LTPEI +QIF  KPAV QA+L FVPSKM E +FW KY +AEYLHSTKN
Sbjct: 184  MSDGRINQVKFQLTPEIKYQIFTLKPAVHQAFLNFVPSKMNEVDFWNKYFKAEYLHSTKN 243

Query: 1297 VVXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYIHIQDHGLSRG 1118
             V            AVFLK D++L  EAR+K+RRVDPTLDMEAD+GDDY H+ DHG+ R 
Sbjct: 244  AVAAAAEAAEDEDLAVFLKDDEILEIEARKKVRRVDPTLDMEADQGDDYTHLPDHGIFRD 303

Query: 1117 DSKDVLESQYEPYRRSFSQNLNQHGAVVLQGRLIDVELGDTRTVAEAFARKKQVELAKEL 938
             SK++ E+Q   Y+R+  Q+LN+ GAVVL+G+ +D+E+ + RTVAE  AR+KQ     E 
Sbjct: 304  GSKEISEAQNSLYKRTLLQDLNRQGAVVLEGKTLDMEMENPRTVAEILARRKQ-----ES 358

Query: 937  SDVNLEKERSERTSRMAEIDDLQAARDPPVAPLSIKDPRDYFDSQQANALKALGDSGSGG 758
             +V  ++ER  R S+M  I+DLQ+  D   APL IKDPRDYFD QQANA+K L DS  G 
Sbjct: 359  DEVVGDEERRNRISKMTPIEDLQSQDDHRYAPLCIKDPRDYFDFQQANAVKTLDDSQPGM 418

Query: 757  KLLNCSVSTHEAYGSLKEFISEVKTLGITEPLINAEVALKVLNGLTQNISSTKYNLGRNP 578
            + + CS+ + EAYGSL+  IS+++T G+ +PL + EVALKVL+GLT+NISS+KY+LG+  
Sbjct: 419  EQMMCSLGSEEAYGSLRASISKIQTTGLRDPLFSPEVALKVLHGLTKNISSSKYHLGKTS 478

Query: 577  NESVLDRLPNITKEELLLHWTSIQELLQHFWSSYPITTKYLSTKVTRLKDAMSKIYPKLQ 398
             ESVLD LPN TKE+LL HW   QELL+H+WSSYP+TT+ L  K  RLKD++S+IY KL+
Sbjct: 479  QESVLDILPNTTKEKLLDHWVCSQELLRHYWSSYPVTTQNLVNKTRRLKDSISQIYSKLE 538

Query: 397  EMKESVQSDLRHQVSLLVQPLLQALDAAFAHYDADVQKRSDRSVERANGF 248
            E+K S QSDLRHQVSL+V P+ QALDAA  HYDAD++KR+ R   ++NG+
Sbjct: 539  EIKVSAQSDLRHQVSLVVHPMQQALDAALLHYDADIRKRNARG-SKSNGY 587


>ref|XP_006589332.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-3-like isoform X1 [Glycine max]
            gi|571483735|ref|XP_006589333.1| PREDICTED: probable RNA
            polymerase II transcription factor B subunit 1-3-like
            isoform X2 [Glycine max]
          Length = 587

 Score =  632 bits (1630), Expect = e-178
 Identities = 329/590 (55%), Positives = 436/590 (73%), Gaps = 7/590 (1%)
 Frame = -1

Query: 1996 KVVKRAKYKSSIKDPGIPGVLRLTKERFFFMPNDPSSSPKLNVEFRTIKGFKSSKGSTKQ 1817
            +VVKRAKYK+++KDPG PGVL+LT++RF F PNDP+S  KL+VEFR I+G K +K  +KQ
Sbjct: 5    QVVKRAKYKTTVKDPGTPGVLKLTQDRFVFKPNDPTSKTKLDVEFRFIQGHKVTKEGSKQ 64

Query: 1816 V-LLNLTQDQGVNYFFEFENFPDRDVCKEFVAMAI-----ATSRESLQDEQLSAAETERR 1655
              LLNL + QG +  FE E+F D  VC+E V  A+       + + + +EQLS AE   R
Sbjct: 65   PPLLNLIRAQG-SCIFELESFADLHVCRELVGFALNRNVPGEATKVISEEQLSPAEMALR 123

Query: 1654 IKLLQENSDLQKLHKQFVIGGILSEAEFWATRKKLLGQNDTRRPKQRVALKNDM-WSTKP 1478
            IKLLQE+S LQ+LHK+ V  G L+E+EFWAT+KKLL Q+++R+ KQR+  KN + + TKP
Sbjct: 124  IKLLQEDSKLQRLHKELVASGKLTESEFWATKKKLLDQDESRKLKQRIGFKNSLIFDTKP 183

Query: 1477 LSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLRFVPSKMTEKEFWTKYSRAEYLHSTKN 1298
            +SDG+ N+V F LTPEI +QIFA KPAV QA+L FVPSKM E +FW KY +AEYLHSTKN
Sbjct: 184  MSDGRINQVKFQLTPEIKYQIFALKPAVHQAFLNFVPSKMNEVDFWNKYFKAEYLHSTKN 243

Query: 1297 VVXXXXXXXXXXXXAVFLKQDDMLANEARRKIRRVDPTLDMEADEGDDYIHIQDHGLSRG 1118
             V            AVFLK D++L  EAR+K+RRVDPTLDMEAD+GDDY H+ DHG+ R 
Sbjct: 244  AVAAAAEAAEDEDLAVFLKDDEILEIEARKKVRRVDPTLDMEADQGDDYTHLPDHGIFRD 303

Query: 1117 DSKDVLESQYEPYRRSFSQNLNQHGAVVLQGRLIDVELGDTRTVAEAFARKKQVELAKEL 938
             SKD+ E+Q   Y+R+  Q+LN+ GAVVL+G+ +D+E+   RTVAE  AR+KQ       
Sbjct: 304  GSKDISEAQNSLYKRTLLQDLNRQGAVVLEGKTLDMEMEHPRTVAEILARRKQE------ 357

Query: 937  SDVNLEKERSERTSRMAEIDDLQAARDPPVAPLSIKDPRDYFDSQQANALKALGDSGSGG 758
             D  +++ER  R S+M  I+DLQA  + P APL IKDPRDYFDSQQANA+K L DS +G 
Sbjct: 358  CDGVVDEERRNRISKMTPIEDLQAQDNHPYAPLCIKDPRDYFDSQQANAVKTLDDSQAGM 417

Query: 757  KLLNCSVSTHEAYGSLKEFISEVKTLGITEPLINAEVALKVLNGLTQNISSTKYNLGRNP 578
            + + CS+ + EAY SL+  IS++KT G+ +PL + +VALKVLNGLT+NI+STKY+LG++ 
Sbjct: 418  EQMKCSLGSEEAYDSLRASISKIKTTGLRDPLFSPDVALKVLNGLTKNITSTKYHLGKSS 477

Query: 577  NESVLDRLPNITKEELLLHWTSIQELLQHFWSSYPITTKYLSTKVTRLKDAMSKIYPKLQ 398
             ESVLD LPN TKE+LL HW   QELL+HFWSSYP++T+ L +K  RLKD++S+IY KL+
Sbjct: 478  QESVLDILPNSTKEKLLDHWVCSQELLRHFWSSYPVSTQNLVSKTRRLKDSISQIYSKLE 537

Query: 397  EMKESVQSDLRHQVSLLVQPLLQALDAAFAHYDADVQKRSDRSVERANGF 248
            ++K S +SDLRH VSL+V P+ QAL+AA  HY+AD++KR+ R  ++ NG+
Sbjct: 538  DIKVSAESDLRHHVSLVVHPMQQALNAALLHYEADIRKRNARG-QKPNGY 586