BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00010135
         (900 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28010.3| unnamed protein product [Vitis vinifera]              251   2e-64
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme...   251   2e-64
ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polyme...   251   3e-64
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr...   234   3e-59
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr...   234   3e-59
ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Popu...   234   3e-59
ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Popu...   234   3e-59
emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]   233   1e-58
gb|EMJ05474.1| hypothetical protein PRUPE_ppa001584mg [Prunus pe...   230   5e-58
ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polyme...   229   8e-58
gb|EXB59780.1| putative RNA-dependent RNA polymerase 3 [Morus no...   228   3e-57
ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [A...   226   9e-57
ref|XP_004288887.1| PREDICTED: probable RNA-dependent RNA polyme...   219   1e-54
ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polyme...   218   2e-54
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme...   218   2e-54
ref|XP_004513037.1| PREDICTED: probable RNA-dependent RNA polyme...   212   2e-52
ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Popu...   207   3e-51
ref|XP_004288888.1| PREDICTED: probable RNA-dependent RNA polyme...   204   3e-50
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ...   202   1e-49
gb|EOY15730.1| RNA-dependent RNA polymerase family protein, puta...   200   5e-49

>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
          Length = 929

 Score =  251 bits (642), Expect = 2e-64
 Identities = 121/232 (52%), Positives = 169/232 (72%), Gaps = 1/232 (0%)
 Frame = +1

Query: 10   ESSNPMGIAANSWMVFMDRLLILGDDCKNEKDTLKNKILQLIDIYYDALDAPKSGKKVKV 189
            ++S+ +G+AA++W+VFMDRLL L DDC +EK+ LK K+L+L DIYYDALDAPKSG KV V
Sbjct: 693  QTSSAIGMAADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSGMKVNV 752

Query: 190  PSDLIAERYPHYMQRDGNCSYHSTSVLGEIYDKLKEFQSAVHSVGEIWKLPAFDVE-VPE 366
              +L AE++PH+M R+   SYHSTS+LG+IYD ++ FQ    S  EIW+LP F+++ VP+
Sbjct: 753  SKELKAEKFPHFMGRES--SYHSTSILGQIYDAVESFQPENQSTKEIWRLPLFNIDAVPQ 810

Query: 367  RYMGKWRELYDKYRHEMRDALSKSQDSKNKAANEVIKKYKQLLYGAEDFQESNKDVEEIH 546
              +  W++ YD+YR EM  AL    ++K++ A EVI KYKQ+LYGA +F+ES +++E+I 
Sbjct: 811  ACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGAAEFEESPRNLEDIF 870

Query: 547  NEALAIYHVTYNFAIGQGDVAKCGFAWKVAGSALCNLHAFRTKENPIRILPS 702
            +EALAIYHVTY F I    V+ C F W+VAG ALC L+  +  E  +  +PS
Sbjct: 871  DEALAIYHVTYEFVINGARVSYCNFPWRVAGRALCKLYTVKLGEKSMVCVPS 922


>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
            vinifera]
          Length = 943

 Score =  251 bits (642), Expect = 2e-64
 Identities = 121/232 (52%), Positives = 169/232 (72%), Gaps = 1/232 (0%)
 Frame = +1

Query: 10   ESSNPMGIAANSWMVFMDRLLILGDDCKNEKDTLKNKILQLIDIYYDALDAPKSGKKVKV 189
            ++S+ +G+AA++W+VFMDRLL L DDC +EK+ LK K+L+L DIYYDALDAPKSG KV V
Sbjct: 707  QTSSAIGMAADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSGMKVNV 766

Query: 190  PSDLIAERYPHYMQRDGNCSYHSTSVLGEIYDKLKEFQSAVHSVGEIWKLPAFDVE-VPE 366
              +L AE++PH+M R+   SYHSTS+LG+IYD ++ FQ    S  EIW+LP F+++ VP+
Sbjct: 767  SKELKAEKFPHFMGRES--SYHSTSILGQIYDAVESFQPENQSTKEIWRLPLFNIDAVPQ 824

Query: 367  RYMGKWRELYDKYRHEMRDALSKSQDSKNKAANEVIKKYKQLLYGAEDFQESNKDVEEIH 546
              +  W++ YD+YR EM  AL    ++K++ A EVI KYKQ+LYGA +F+ES +++E+I 
Sbjct: 825  ACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGAAEFEESPRNLEDIF 884

Query: 547  NEALAIYHVTYNFAIGQGDVAKCGFAWKVAGSALCNLHAFRTKENPIRILPS 702
            +EALAIYHVTY F I    V+ C F W+VAG ALC L+  +  E  +  +PS
Sbjct: 885  DEALAIYHVTYEFVINGARVSYCNFPWRVAGRALCKLYTVKLGEKSMVCVPS 936


>ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
            lycopersicum]
          Length = 1011

 Score =  251 bits (641), Expect = 3e-64
 Identities = 122/234 (52%), Positives = 164/234 (70%)
 Frame = +1

Query: 1    QTKESSNPMGIAANSWMVFMDRLLILGDDCKNEKDTLKNKILQLIDIYYDALDAPKSGKK 180
            + K     M +AA+SW+ FMDRLL L DD  ++  +LK K+L LIDIYYDALDAPKSGKK
Sbjct: 772  EAKSKGANMSLAADSWLAFMDRLLTLRDDNVDDMHSLKGKMLHLIDIYYDALDAPKSGKK 831

Query: 181  VKVPSDLIAERYPHYMQRDGNCSYHSTSVLGEIYDKLKEFQSAVHSVGEIWKLPAFDVEV 360
            V +P  L A ++PHYM++  +CSYHSTS+LG+IYD +  +      + EI KLP F+VE+
Sbjct: 832  VSIPHYLKANKFPHYMEKGNSCSYHSTSILGQIYDHVDSYPDEDLCITEISKLPCFEVEI 891

Query: 361  PERYMGKWRELYDKYRHEMRDALSKSQDSKNKAANEVIKKYKQLLYGAEDFQESNKDVEE 540
            P+R M  WR  Y++Y+ +M  A++   + +  + NEVIKKYK LLYGA +F+++ +  E+
Sbjct: 892  PQRCMTLWRGRYEEYKKDMTRAMNFDCELRITSCNEVIKKYKMLLYGAVEFEQTVRKTED 951

Query: 541  IHNEALAIYHVTYNFAIGQGDVAKCGFAWKVAGSALCNLHAFRTKENPIRILPS 702
            I +EALAIYHVTY+ A     + KCGFAWKVAGSALC +HA   KE  + ILPS
Sbjct: 952  IFDEALAIYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMYRKEKDLPILPS 1005


>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
            gi|568843311|ref|XP_006475557.1| PREDICTED: probable
            RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
            sinensis] gi|557554498|gb|ESR64512.1| hypothetical
            protein CICLE_v10007331mg [Citrus clementina]
          Length = 1013

 Score =  234 bits (597), Expect = 3e-59
 Identities = 116/219 (52%), Positives = 156/219 (71%), Gaps = 1/219 (0%)
 Frame = +1

Query: 16   SNPMGIAANSWMVFMDRLLILGDDCKNEKDTLKNKILQLIDIYYDALDAPK-SGKKVKVP 192
            SN   +AA+ W   MDR L LGD+   EK  +K  +L+LI+IYYDALDAPK SG KV+VP
Sbjct: 777  SNAKSLAADCWQAVMDRFLTLGDESAEEKAAMKENMLRLINIYYDALDAPKKSGIKVEVP 836

Query: 193  SDLIAERYPHYMQRDGNCSYHSTSVLGEIYDKLKEFQSAVHSVGEIWKLPAFDVEVPERY 372
             DL  E++P YM+RD + S+ STSVLG IY+ +K +++   SV EIWKLP FD  VPE  
Sbjct: 837  EDLKVEKFPCYMRRDESVSFESTSVLGTIYNTVKSYEAVDRSVTEIWKLPCFDDGVPEAC 896

Query: 373  MGKWRELYDKYRHEMRDALSKSQDSKNKAANEVIKKYKQLLYGAEDFQESNKDVEEIHNE 552
            M KW+  YD+YR EM++A+ K    + +AA  VI+KYKQ+LYGA +F++S + +EEI+NE
Sbjct: 897  MTKWKGYYDQYRWEMKEAIDKCTVEREEAAELVIEKYKQILYGAAEFEQSTRTLEEIYNE 956

Query: 553  ALAIYHVTYNFAIGQGDVAKCGFAWKVAGSALCNLHAFR 669
            ALAIY++TY+ A  +  V+ C FAW+VAGSAL   +A R
Sbjct: 957  ALAIYNITYDLAASRRQVSYCSFAWRVAGSALRKFYARR 995


>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
            gi|568843309|ref|XP_006475556.1| PREDICTED: probable
            RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
            sinensis] gi|557554497|gb|ESR64511.1| hypothetical
            protein CICLE_v10007331mg [Citrus clementina]
          Length = 1015

 Score =  234 bits (597), Expect = 3e-59
 Identities = 116/219 (52%), Positives = 156/219 (71%), Gaps = 1/219 (0%)
 Frame = +1

Query: 16   SNPMGIAANSWMVFMDRLLILGDDCKNEKDTLKNKILQLIDIYYDALDAPK-SGKKVKVP 192
            SN   +AA+ W   MDR L LGD+   EK  +K  +L+LI+IYYDALDAPK SG KV+VP
Sbjct: 779  SNAKSLAADCWQAVMDRFLTLGDESAEEKAAMKENMLRLINIYYDALDAPKKSGIKVEVP 838

Query: 193  SDLIAERYPHYMQRDGNCSYHSTSVLGEIYDKLKEFQSAVHSVGEIWKLPAFDVEVPERY 372
             DL  E++P YM+RD + S+ STSVLG IY+ +K +++   SV EIWKLP FD  VPE  
Sbjct: 839  EDLKVEKFPCYMRRDESVSFESTSVLGTIYNTVKSYEAVDRSVTEIWKLPCFDDGVPEAC 898

Query: 373  MGKWRELYDKYRHEMRDALSKSQDSKNKAANEVIKKYKQLLYGAEDFQESNKDVEEIHNE 552
            M KW+  YD+YR EM++A+ K    + +AA  VI+KYKQ+LYGA +F++S + +EEI+NE
Sbjct: 899  MTKWKGYYDQYRWEMKEAIDKCTVEREEAAELVIEKYKQILYGAAEFEQSTRTLEEIYNE 958

Query: 553  ALAIYHVTYNFAIGQGDVAKCGFAWKVAGSALCNLHAFR 669
            ALAIY++TY+ A  +  V+ C FAW+VAGSAL   +A R
Sbjct: 959  ALAIYNITYDLAASRRQVSYCSFAWRVAGSALRKFYARR 997


>ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
            gi|550334280|gb|ERP58267.1| hypothetical protein
            POPTR_0007s06560g [Populus trichocarpa]
          Length = 877

 Score =  234 bits (597), Expect = 3e-59
 Identities = 118/233 (50%), Positives = 161/233 (69%), Gaps = 2/233 (0%)
 Frame = +1

Query: 10   ESSNPMGIAANSWMVFMDRLLILGDDCKNEKDTLKNKILQLIDIYYDALDAPKSG-KKVK 186
            + S+ +G+AA+SW+  MDRLL LG+DC  E   +K  I  LIDIYYDALDAPK G ++++
Sbjct: 640  QPSSTVGVAADSWLAMMDRLLTLGNDCAEEIVCMKENINLLIDIYYDALDAPKKGGRRIE 699

Query: 187  VPSDLIAERYPHYMQRDGNCSYHSTSVLGEIYDKLKEFQSAVHSVGEIWKLPAFDVEVPE 366
            VP  L AE +PH+M ++   +Y STS+LG+IYDK+K ++    S  ++WKLP FD EV E
Sbjct: 700  VPEGLKAELFPHFMGKNEKKTYRSTSILGKIYDKVKAYEDMDLSSNDVWKLPCFDDEVHE 759

Query: 367  RYMGKWRELYDKYRHEMRDALSKSQDSKNKAANEVIKKYKQLLYGAEDFQESNKDVEEIH 546
             Y+ KW+ELY +YR EMR+AL   ++S +K ANEVI+KYK+ LY A +F  S +  EEI 
Sbjct: 760  LYLVKWKELYGQYRKEMRNALKAGEESNDK-ANEVIRKYKEFLYEAAEFNLSKRRDEEIF 818

Query: 547  NEALAIYHVTYNFAIGQGDVAKCGFAWKVAGSALCNLHAFRTK-ENPIRILPS 702
             EA+A+Y V+YN A  QG V  C FAW+VAG ALC L+  + + E P+   PS
Sbjct: 819  EEAMALYQVSYNHAKSQGVVGNCSFAWRVAGLALCTLYVLKNQGERPMICSPS 871


>ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
            gi|550334279|gb|ERP58266.1| hypothetical protein
            POPTR_0007s06560g [Populus trichocarpa]
          Length = 899

 Score =  234 bits (597), Expect = 3e-59
 Identities = 118/233 (50%), Positives = 161/233 (69%), Gaps = 2/233 (0%)
 Frame = +1

Query: 10   ESSNPMGIAANSWMVFMDRLLILGDDCKNEKDTLKNKILQLIDIYYDALDAPKSG-KKVK 186
            + S+ +G+AA+SW+  MDRLL LG+DC  E   +K  I  LIDIYYDALDAPK G ++++
Sbjct: 662  QPSSTVGVAADSWLAMMDRLLTLGNDCAEEIVCMKENINLLIDIYYDALDAPKKGGRRIE 721

Query: 187  VPSDLIAERYPHYMQRDGNCSYHSTSVLGEIYDKLKEFQSAVHSVGEIWKLPAFDVEVPE 366
            VP  L AE +PH+M ++   +Y STS+LG+IYDK+K ++    S  ++WKLP FD EV E
Sbjct: 722  VPEGLKAELFPHFMGKNEKKTYRSTSILGKIYDKVKAYEDMDLSSNDVWKLPCFDDEVHE 781

Query: 367  RYMGKWRELYDKYRHEMRDALSKSQDSKNKAANEVIKKYKQLLYGAEDFQESNKDVEEIH 546
             Y+ KW+ELY +YR EMR+AL   ++S +K ANEVI+KYK+ LY A +F  S +  EEI 
Sbjct: 782  LYLVKWKELYGQYRKEMRNALKAGEESNDK-ANEVIRKYKEFLYEAAEFNLSKRRDEEIF 840

Query: 547  NEALAIYHVTYNFAIGQGDVAKCGFAWKVAGSALCNLHAFRTK-ENPIRILPS 702
             EA+A+Y V+YN A  QG V  C FAW+VAG ALC L+  + + E P+   PS
Sbjct: 841  EEAMALYQVSYNHAKSQGVVGNCSFAWRVAGLALCTLYVLKNQGERPMICSPS 893


>emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]
          Length = 1202

 Score =  233 bits (593), Expect = 1e-58
 Identities = 116/231 (50%), Positives = 160/231 (69%)
 Frame = +1

Query: 10   ESSNPMGIAANSWMVFMDRLLILGDDCKNEKDTLKNKILQLIDIYYDALDAPKSGKKVKV 189
            ++S+ +G+AA++W+VFMDRLL L DDC +EK+ LK K+L+L DIYYDALDAPKSG KV V
Sbjct: 976  QTSSAIGMAADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSGMKVNV 1035

Query: 190  PSDLIAERYPHYMQRDGNCSYHSTSVLGEIYDKLKEFQSAVHSVGEIWKLPAFDVEVPER 369
              +L AE++PH+M R+   SYHSTS+LG+IYD ++ FQ    S  +          VP+ 
Sbjct: 1036 SKELKAEKFPHFMGRES--SYHSTSILGQIYDAVESFQPENQSTKDA---------VPQA 1084

Query: 370  YMGKWRELYDKYRHEMRDALSKSQDSKNKAANEVIKKYKQLLYGAEDFQESNKDVEEIHN 549
             +  W++ YD+YR EM  AL    ++K++ A EVI KYKQ+LYGA +F+ES + +E+I +
Sbjct: 1085 CLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGAAEFEESPRKLEDIFD 1144

Query: 550  EALAIYHVTYNFAIGQGDVAKCGFAWKVAGSALCNLHAFRTKENPIRILPS 702
            EALAIYHVTY FAI    V+ C F W+VAG ALC L+  +  E  +  +PS
Sbjct: 1145 EALAIYHVTYEFAINGARVSYCNFPWRVAGRALCKLYTVKLGEKSMVCVPS 1195


>gb|EMJ05474.1| hypothetical protein PRUPE_ppa001584mg [Prunus persica]
          Length = 798

 Score =  230 bits (587), Expect = 5e-58
 Identities = 124/235 (52%), Positives = 159/235 (67%), Gaps = 6/235 (2%)
 Frame = +1

Query: 10   ESSNPMGIAANSWMVFMDRLLILGDDCKNEKDTLKNKILQLIDIYYDALDAPKSGKKVKV 189
            E S  M  A++SW+  MDRLLILGD   +EK  +K  +L+L+D+YY+ALDAPK G KV V
Sbjct: 562  EPSFAMSEASDSWLAMMDRLLILGDSSNSEKTHVKANMLRLVDLYYEALDAPKKGGKVVV 621

Query: 190  PSDLIAERYPHYMQRDGNCSYHSTSVLGEIYDKLKEFQSAVHSVGEIWKLPAFDVEVPER 369
            P +L +  +PHYM+R    SY STS+LG IYD +  +Q+   S+ E+ KLP FDVEVPE 
Sbjct: 622  PGELKSNLFPHYMERVN--SYKSTSILGLIYDTVNAYQAEDASIKEVKKLPMFDVEVPEE 679

Query: 370  YMGKWRELYDKYRHEMRDAL-SKSQDSKNKAANEVIKKYKQLLY-GAEDFQESNKDVEEI 543
             + KWRE Y  YR EM  A+    +DSKN AA++V++KYK++LY GAED + S + + EI
Sbjct: 680  CLKKWREHYQHYRSEMSSAMQDDDRDSKNNAADKVLRKYKEILYGGAEDLENSTRPLHEI 739

Query: 544  HNEALAIYHVTYNFAIGQGDVAKCGFAWKVAGSALC----NLHAFRTKENPIRIL 696
             +EALAIY VTY+ AI QG V KC FAWKVAGSALC    N    RT E    +L
Sbjct: 740  FDEALAIYRVTYDHAISQGAVGKCCFAWKVAGSALCKYYMNKQGARTIEASFSVL 794


>ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
            tuberosum]
          Length = 1110

 Score =  229 bits (585), Expect = 8e-58
 Identities = 116/236 (49%), Positives = 166/236 (70%), Gaps = 4/236 (1%)
 Frame = +1

Query: 1    QTKESSNPMGIAANSWMVFMDRLLILGDDCKNEKDTLKN---KILQLIDIYYDALDAPKS 171
            +T+  +  M  A+ +W   MDRLLILG +   E + +K+   K+ +LID+YYDA+DAPKS
Sbjct: 857  ETRMPNYSMADASANWYALMDRLLILGKNNTTENEEIKSVKEKLFELIDLYYDAIDAPKS 916

Query: 172  GKKVKVPSDLIAERYPHYMQRDGNCSYHSTSVLGEIYDKLKEFQSAVHSVGEIWKLPAFD 351
            G KV +P  L  +++PH++Q+    SYHSTSVLGEIYD++++F++   +  EI KL AF+
Sbjct: 917  GNKVYIPKRLKVDKFPHFLQKKE--SYHSTSVLGEIYDRVEKFKAEEPAAVEIKKLSAFE 974

Query: 352  VEVPERYMGKWRELYDKYRHEMRDALSKSQDSKNKAANEVIKKYKQLLYGAEDFQESNKD 531
            V +P+  +  W E Y  YR EM++AL+ S +SKN  A++VIKKYKQLLY A D +ES + 
Sbjct: 975  VGIPDTCLRLWEERYRNYRFEMKEALNTSSESKNDLADQVIKKYKQLLYEAPDMEESIRS 1034

Query: 532  VEEIHNEALAIYHVTYNFAIGQGDVAKCGFAWKVAGSALCNLHA-FRTKENPIRIL 696
              +++N+ALAIY VTY++A   GDV KCGFAWKVAG+ALC LHA    KE+  +++
Sbjct: 1035 TTDMYNDALAIYCVTYDYAKAIGDVRKCGFAWKVAGAALCKLHAELHAKEHNQKVM 1090


>gb|EXB59780.1| putative RNA-dependent RNA polymerase 3 [Morus notabilis]
          Length = 521

 Score =  228 bits (580), Expect = 3e-57
 Identities = 116/231 (50%), Positives = 151/231 (65%), Gaps = 19/231 (8%)
 Frame = +1

Query: 34  AANSWMVFMDRLLILGDDCKNEKDTLKNKILQLIDIYYDALDAPKSGKK----------- 180
           A+  W+  MDR L LGDDC  EK+ +K+ + +L+DIYYDALDAPK G K           
Sbjct: 275 ASEGWLALMDRFLTLGDDCVAEKNAVKDNLFELVDIYYDALDAPKQGGKQQDLAKFFEAY 334

Query: 181 --------VKVPSDLIAERYPHYMQRDGNCSYHSTSVLGEIYDKLKEFQSAVHSVGEIWK 336
                   V+VP +L   R+PHYM++    S+HS S+LG IYD++  +Q   HS  EI+K
Sbjct: 335 AALELSFQVEVPRELKPNRFPHYMEKQN--SFHSRSILGWIYDEVDAYQLEDHSNKEIFK 392

Query: 337 LPAFDVEVPERYMGKWRELYDKYRHEMRDALSKSQDSKNKAANEVIKKYKQLLYGAEDFQ 516
           LP F+VEVPE  + KW+  Y  YR +M DAL      K +AA EV +KYK+LLYGAE+ +
Sbjct: 393 LPHFEVEVPEACLTKWKAHYKDYRDDMCDALLAKDVGKTEAAEEVKRKYKRLLYGAEELE 452

Query: 517 ESNKDVEEIHNEALAIYHVTYNFAIGQGDVAKCGFAWKVAGSALCNLHAFR 669
           ES K +EEI+NEALAIYHV Y++AI Q  V+ C FAW +AGSAL  LHAF+
Sbjct: 453 ESTKKMEEIYNEALAIYHVCYDYAISQRKVSYCSFAWNIAGSALLKLHAFK 503


>ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [Amborella trichopoda]
            gi|548857326|gb|ERN15132.1| hypothetical protein
            AMTR_s00056p00110240 [Amborella trichopoda]
          Length = 988

 Score =  226 bits (576), Expect = 9e-57
 Identities = 119/223 (53%), Positives = 153/223 (68%)
 Frame = +1

Query: 34   AANSWMVFMDRLLILGDDCKNEKDTLKNKILQLIDIYYDALDAPKSGKKVKVPSDLIAER 213
            AA+SW+V+MDRLL LGD+C  EK  L  K+L+L D+YY+A+DAPKSGKKV+VP DL  ER
Sbjct: 763  AADSWLVYMDRLLTLGDECAEEKGCLHQKMLKLADLYYEAVDAPKSGKKVEVPKDLKPER 822

Query: 214  YPHYMQRDGNCSYHSTSVLGEIYDKLKEFQSAVHSVGEIWKLPAFDVEVPERYMGKWREL 393
            YPH+M+R     Y STS+LG+IYD +   Q  V    +I  LP F  EV    M KW+ L
Sbjct: 823  YPHFMER--TYQYTSTSILGQIYDLVASAQMDV-PCEDIELLPCFLEEVEPSGMEKWKGL 879

Query: 394  YDKYRHEMRDALSKSQDSKNKAANEVIKKYKQLLYGAEDFQESNKDVEEIHNEALAIYHV 573
            Y +YR EM  ALS S D K   A+EVI+ YK++LYGA++++E  +  EEI  EA  IY +
Sbjct: 880  YAQYRDEMNKALS-STDQKKSNADEVIQNYKKILYGAQEYEERTRPREEIFREACEIYAI 938

Query: 574  TYNFAIGQGDVAKCGFAWKVAGSALCNLHAFRTKENPIRILPS 702
            +Y +A  + D+AKCGFAWKVAG ALC LHA + K+N I  L S
Sbjct: 939  SYFYAKEKSDIAKCGFAWKVAGCALCELHALKQKKNSITCLSS 981


>ref|XP_004288887.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Fragaria
            vesca subsp. vesca]
          Length = 1405

 Score =  219 bits (557), Expect = 1e-54
 Identities = 117/233 (50%), Positives = 156/233 (66%), Gaps = 2/233 (0%)
 Frame = +1

Query: 10   ESSNPMGIAANSWMVFMDRLLILGDDCKNEKDTLKNKILQLIDIYYDALDAPKSGKKVKV 189
            E S  M  AA++W+ +MD  L LGD   +EK+ +K KILQL+D+YY ALDA K G KV V
Sbjct: 1169 EPSFAMSEAADNWLAWMDHFLTLGDSNIHEKNNVKEKILQLVDLYYTALDAAKKGVKVDV 1228

Query: 190  PSDLIAERYPHYMQRDGNCSYHSTSVLGEIYDKLKEFQSAVHSVGEIWKLPAFDV-EVPE 366
            P +L    +PHYM +  N SY STS+LG IY+++ E Q+   S+ E+ KLPAFD  EVP+
Sbjct: 1229 PKELKVSCFPHYMGK--NRSYPSTSILGSIYNRVDEHQTEDRSLKEVEKLPAFDENEVPD 1286

Query: 367  RYMGKWRELYDKYRHEMRDALSKS-QDSKNKAANEVIKKYKQLLYGAEDFQESNKDVEEI 543
              + KW EL+ +YR EM  AL    + SKN++A+ VI+KY+++LY A DF+ES + +EEI
Sbjct: 1287 ACLDKWAELHRQYRKEMASALDDDDKQSKNQSADVVIRKYRKILYEANDFEESRRPIEEI 1346

Query: 544  HNEALAIYHVTYNFAIGQGDVAKCGFAWKVAGSALCNLHAFRTKENPIRILPS 702
            +NEA AIYHV Y+ A   G+V  C FAW+VAG ALC LHA    E    I+ S
Sbjct: 1347 YNEAHAIYHVCYDHAKRVGNVKVCSFAWRVAGKALCQLHARNNNERFCTIVSS 1399


>ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine max]
          Length = 988

 Score =  218 bits (556), Expect = 2e-54
 Identities = 116/235 (49%), Positives = 164/235 (69%), Gaps = 4/235 (1%)
 Frame = +1

Query: 10   ESSNPMGIAANSWMVFMDRLLILGDDC--KNEKDTLKNKILQLIDIYYDALDAPKSGKKV 183
            + S  MG++ NSWM  MDRLL L ++C  +NEK+ +K  +L+LIDIYY+ALDAPKSG+KV
Sbjct: 750  QPSYAMGMSENSWMALMDRLLTL-NNCTNENEKERVKENMLKLIDIYYEALDAPKSGRKV 808

Query: 184  KVPSDLIAERYPHYMQRDGNCSYHSTSVLGEIYDKLKEFQSAVHSVGEIWKLPAFDVEVP 363
            +VP+DLIAE +PHYM++D   S+ STS+LG IYD++ E       VGEIWKLP FDVEVP
Sbjct: 809  QVPNDLIAELFPHYMEKDK--SFTSTSILGLIYDEV-EIWLENDMVGEIWKLPCFDVEVP 865

Query: 364  ERYMGKWRELYDKYRHEMRDALS-KSQDSKNKAANEVIKKYKQLLYGAE-DFQESNKDVE 537
               + KW+  Y++YR +M DAL+ K +   ++ A EV +KYK+  YG   + +   K + 
Sbjct: 866  PSCLEKWKTKYEEYRKDMTDALNLKDKSKSHEEAAEVNRKYKEEFYGPTLEMEGCLKSIG 925

Query: 538  EIHNEALAIYHVTYNFAIGQGDVAKCGFAWKVAGSALCNLHAFRTKENPIRILPS 702
            +I NEALA+Y+V+Y +A+ + +V +CGFAWK+AGSAL  L+  +  E  +   PS
Sbjct: 926  DIFNEALAVYNVSYEYAMLKKEVKRCGFAWKIAGSALTRLYIIKQNEKALNCDPS 980


>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
            sativus]
          Length = 1056

 Score =  218 bits (556), Expect = 2e-54
 Identities = 114/232 (49%), Positives = 158/232 (68%), Gaps = 1/232 (0%)
 Frame = +1

Query: 10   ESSNPMGIAANSWMVFMDRLLILGDDCKNEKDTLKNKILQLIDIYYDALDAPKSG-KKVK 186
            + S    +AA++W+  MD+ L+LG++ K E++ ++ KILQLI+IYYDALDAPK G KK++
Sbjct: 821  QPSYAKSVAADNWLALMDQFLMLGEERKEERNCIRAKILQLINIYYDALDAPKKGGKKIE 880

Query: 187  VPSDLIAERYPHYMQRDGNCSYHSTSVLGEIYDKLKEFQSAVHSVGEIWKLPAFDVEVPE 366
            VP  L A   PH+M+R  N SY STS+LG+I+D    +Q  V ++ E+ KLP F+ E+PE
Sbjct: 881  VPKHLKAGTLPHFMERGKN-SYVSTSILGQIFDTANMYQEEVPNI-EVQKLPCFEEELPE 938

Query: 367  RYMGKWRELYDKYRHEMRDALSKSQDSKNKAANEVIKKYKQLLYGAEDFQESNKDVEEIH 546
                KW+ LY+ YR +M DA+    D+KN AA   IKKYK++LYGAE+ + S +  EE++
Sbjct: 939  YIFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSNEEVY 998

Query: 547  NEALAIYHVTYNFAIGQGDVAKCGFAWKVAGSALCNLHAFRTKENPIRILPS 702
             EALAIY VTY+ A+ +  V  CGFAWKVAGSAL  L+A +  E     LPS
Sbjct: 999  QEALAIYQVTYDHAMSR-SVRNCGFAWKVAGSALFKLYAIKHSERSFHCLPS 1049


>ref|XP_004513037.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cicer
            arietinum]
          Length = 997

 Score =  212 bits (539), Expect = 2e-52
 Identities = 117/218 (53%), Positives = 154/218 (70%), Gaps = 3/218 (1%)
 Frame = +1

Query: 10   ESSNPMGIAANSWMVFMDRLLILGDDCKNEKDTL--KNKILQLIDIYYDALDAPKSGK-K 180
            +SS+ +GIAA+SWM  MDRLL L +D   EK+ L  K  IL+LIDIYY+ALDAPK G  K
Sbjct: 759  QSSSAIGIAADSWMALMDRLLTLRNDITKEKEVLQVKENILKLIDIYYEALDAPKKGGGK 818

Query: 181  VKVPSDLIAERYPHYMQRDGNCSYHSTSVLGEIYDKLKEFQSAVHSVGEIWKLPAFDVEV 360
            ++VP DL  E +PHYM+RDG  S+ STS+LG IYD++  +Q++  S  +I KLP  DVE+
Sbjct: 819  IQVPEDLTVELFPHYMERDGK-SFTSTSILGLIYDEVCRWQTSDMSGTKIRKLPCLDVEI 877

Query: 361  PERYMGKWRELYDKYRHEMRDALSKSQDSKNKAANEVIKKYKQLLYGAEDFQESNKDVEE 540
            P   + KW  LY +YR +M  A   +  SK +AA EVIKKYKQ    A + ++ +K+V +
Sbjct: 878  PMHCVEKWETLYKEYRTDMSFACQSN--SKEEAA-EVIKKYKQKFDVAANIEDCSKNVTD 934

Query: 541  IHNEALAIYHVTYNFAIGQGDVAKCGFAWKVAGSALCN 654
            I++EALA+YHVTY++AI   DVAKC FAWKVAG AL N
Sbjct: 935  IYHEALAVYHVTYDYAIQWNDVAKCAFAWKVAGPALTN 972


>ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Populus trichocarpa]
            gi|550336519|gb|ERP59562.1| hypothetical protein
            POPTR_0006s17780g [Populus trichocarpa]
          Length = 866

 Score =  207 bits (528), Expect = 3e-51
 Identities = 114/233 (48%), Positives = 150/233 (64%), Gaps = 2/233 (0%)
 Frame = +1

Query: 10   ESSNPMGIAANSWMVFMDRLLILGDDCKNEKDTLKNKILQLIDIYYDALDAPKSG-KKVK 186
            + S  +G+AA+SW+  MDRLL LG+DC  E   +K  I  LIDIYYDALDAPK G +K++
Sbjct: 640  QPSFTVGVAADSWLAMMDRLLTLGNDCTEEIACVKKNINLLIDIYYDALDAPKKGGRKIE 699

Query: 187  VPSDLIAERYPHYMQRDGNCSYHSTSVLGEIYDKLKEFQSAVHSVGEIWKLPAFDVEVPE 366
            VP  L AE +PH+M++    +Y STS+LG+IYDK+K ++    S             V E
Sbjct: 700  VPEALKAELFPHFMEKHEKKTYRSTSILGKIYDKVKAYEDMDLSSN-----------VHE 748

Query: 367  RYMGKWRELYDKYRHEMRDALSKSQDSKNKAANEVIKKYKQLLYGAEDFQESNKDVEEIH 546
              + KW+ LY +YR EMR+AL   ++ KN  ANEVIKKYK++LY A +F  S +  EEI 
Sbjct: 749  SCLVKWKGLYGQYRTEMRNALQAGKE-KNNEANEVIKKYKEILYEAAEFNLSRRRDEEIF 807

Query: 547  NEALAIYHVTYNFAIGQGDVAKCGFAWKVAGSALCNLHAFRT-KENPIRILPS 702
             EA A+Y VTYN A  QG V KCGFAW+VAG ALC L+  +  +E P+   PS
Sbjct: 808  EEARALYQVTYNHAKRQGAVGKCGFAWRVAGLALCTLYVLKNQEERPLICSPS 860


>ref|XP_004288888.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Fragaria
            vesca subsp. vesca]
          Length = 1068

 Score =  204 bits (520), Expect = 3e-50
 Identities = 113/237 (47%), Positives = 155/237 (65%), Gaps = 12/237 (5%)
 Frame = +1

Query: 28   GIAANSWMVFMDRLLILGDDCKNEKDTLKNKILQLIDIYYDALDAPKSGKKVKVPSDLIA 207
            G AAN+W+  MD+ L LGD    EK  + NKIL+L+DIYY ALDA K G KV+VP DL  
Sbjct: 830  GEAANNWIALMDKFLTLGDS--QEKKDIMNKILRLVDIYYIALDAAKKGVKVEVPKDLKV 887

Query: 208  ERYPHYMQR-DGNCSYHSTSVLGEIYDKLKEFQSAVHSVGEIWKLPAFDV-EVPERYMGK 381
             R+PHYM +     +  S+S+LGEIYD + + Q+ +  + EI KLP FD+ +VPE  +  
Sbjct: 888  PRFPHYMDKLKEEKTETSSSILGEIYDGVGKCQAKLAFLTEIKKLPIFDINQVPEHCLNN 947

Query: 382  WRELYDKYRHEMRDALSKSQDSKNKAANEVIKKYKQL----------LYGAEDFQESNKD 531
            WR+LY++YR EM  A+  +  +K++AA+ VI  YK++          LY A DF+ S+K 
Sbjct: 948  WRKLYEQYRGEMSSAMKNA--NKDQAASSVIGYYKEVIIATLFLGLKLYDAADFEHSSKP 1005

Query: 532  VEEIHNEALAIYHVTYNFAIGQGDVAKCGFAWKVAGSALCNLHAFRTKENPIRILPS 702
            ++ I +EA AIYHV Y++AI + DV +C FAWKVAG ALC LHA +T E  + I PS
Sbjct: 1006 IDAILDEAHAIYHVCYDYAINKRDVQRCSFAWKVAGKALCELHAKKTGEKWLSIAPS 1062


>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
            subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
            RNA polymerase family protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 981

 Score =  202 bits (514), Expect = 1e-49
 Identities = 109/221 (49%), Positives = 150/221 (67%), Gaps = 2/221 (0%)
 Frame = +1

Query: 13   SSNPMGIAANSWMVFMDRLLILGDDCKNEKDTLKNKILQLIDIYYDALDAPKSGKKVKVP 192
            +SN +GIAA+SW+  MDRLLILGD+   EK  +K K+L+LIDIYYDALDAPK G KV +P
Sbjct: 748  ASNVIGIAADSWLTIMDRLLILGDERAEEKAEMKKKMLKLIDIYYDALDAPKKGDKVYLP 807

Query: 193  SDLIAERYPHYMQRDGNCSYHSTSVLGEIYDKLK-EFQSAVHSVGEIWKLPAFDVE-VPE 366
            ++L  + +PHYM+R+    + STS+LG IYD +K +         EI KLP F+ E V E
Sbjct: 808  NELRPDIFPHYMEREK--KFKSTSILGLIYDFVKSQTTEEPTPSSEISKLPCFEDEPVSE 865

Query: 367  RYMGKWRELYDKYRHEMRDALSKSQDSKNKAANEVIKKYKQLLYGAEDFQESNKDVEEIH 546
             +M K R  YD YR EM  A+   +  K+++ANEVI++YKQ  YGA  F++S K +EE++
Sbjct: 866  FHMEKCRRWYDNYRSEMTQAM---KTDKDESANEVIQRYKQEFYGAAGFEDSKKSLEELY 922

Query: 547  NEALAIYHVTYNFAIGQGDVAKCGFAWKVAGSALCNLHAFR 669
             +AL +Y + Y++AI  G V+KCGF WKVAG  LC  +  +
Sbjct: 923  PQALTLYKIVYDYAIHAG-VSKCGFVWKVAGPVLCRFYLMK 962


>gb|EOY15730.1| RNA-dependent RNA polymerase family protein, putative isoform 1
           [Theobroma cacao]
          Length = 328

 Score =  200 bits (509), Expect = 5e-49
 Identities = 106/233 (45%), Positives = 152/233 (65%), Gaps = 4/233 (1%)
 Frame = +1

Query: 16  SNPMGIAANSWMVFMDRLLILGDDCKNEKDTLKNKILQLIDIYYDALDAPKSGKKVKVPS 195
           SN M IA+++ M  MDRLL L D    E+  LK  + +LID+YY++LDAPK+GKK++VP 
Sbjct: 92  SNAMAIASDNCMAVMDRLLTLEDSNSPEEFLLKKNLQRLIDLYYESLDAPKTGKKIEVPR 151

Query: 196 DLIAERYPHYMQRDGNCSYHSTSVLGEIYDKLKEFQSAVHSVGEIWKLPAFDVEVPERYM 375
           +L A+ +PHY++R    S+ S S+LG+IYD +K +   +    E+ KLP FDV  P+   
Sbjct: 152 ELRADAFPHYLERQK--SFKSASILGKIYDFVKSYGEELPRK-EVRKLPCFDVGFPQDCR 208

Query: 376 GKWRELYDKYRHEMRDALS----KSQDSKNKAANEVIKKYKQLLYGAEDFQESNKDVEEI 543
            KW ELY +YR +M   L     KS++ ++ AAN V  KYKQ LYG    ++  + +++I
Sbjct: 209 EKWTELYKQYREDMTQTLQTLDGKSKELRDVAANAVYNKYKQELYGGAVLEQRQRPLDQI 268

Query: 544 HNEALAIYHVTYNFAIGQGDVAKCGFAWKVAGSALCNLHAFRTKENPIRILPS 702
           + EALAIY+++Y++AI   DV KCGFAWKVAGSAL +L+A    E  +   PS
Sbjct: 269 YKEALAIYNISYDYAIRIDDVGKCGFAWKVAGSALLSLYASEQGEKTLSCAPS 321