BLASTX nr result

ID: Rauwolfia21_contig00009254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00009254
         (417 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006347007.1| PREDICTED: putative E3 ubiquitin-protein lig...    89   5e-16
ref|XP_004232907.1| PREDICTED: putative E3 ubiquitin-protein lig...    88   1e-15
gb|EPS67741.1| hypothetical protein M569_07032, partial [Genlise...    84   2e-14
ref|XP_006467760.1| PREDICTED: putative E3 ubiquitin-protein lig...    75   7e-12
ref|XP_006467759.1| PREDICTED: putative E3 ubiquitin-protein lig...    75   7e-12
ref|XP_006449375.1| hypothetical protein CICLE_v10015104mg [Citr...    74   2e-11
ref|XP_002329795.1| predicted protein [Populus trichocarpa] gi|5...    73   4e-11
ref|XP_004982574.1| PREDICTED: putative E3 ubiquitin-protein lig...    71   1e-10
gb|EOY28193.1| Ring finger protein, putative isoform 1 [Theobrom...    69   6e-10
gb|EEE64230.1| hypothetical protein OsJ_19063 [Oryza sativa Japo...    69   6e-10
gb|EOX99468.1| Ring 1b [Theobroma cacao]                               69   8e-10
gb|EXC30589.1| Putative E3 ubiquitin-protein ligase RING1a [Moru...    67   2e-09
tpg|DAA49273.1| TPA: putative RING zinc finger domain superfamil...    67   2e-09
ref|XP_004487268.1| PREDICTED: putative E3 ubiquitin-protein lig...    67   3e-09
gb|EEC79461.1| hypothetical protein OsI_20471 [Oryza sativa Indi...    66   4e-09
gb|AAT44279.1| putative zinc finger protein [Oryza sativa Japoni...    66   4e-09
ref|XP_004961623.1| PREDICTED: putative E3 ubiquitin-protein lig...    66   5e-09
ref|XP_004134950.1| PREDICTED: putative E3 ubiquitin-protein lig...    66   5e-09
ref|XP_002273941.2| PREDICTED: putative E3 ubiquitin-protein lig...    66   5e-09
ref|XP_002328052.1| predicted protein [Populus trichocarpa] gi|5...    65   1e-08

>ref|XP_006347007.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
           [Solanum tuberosum]
          Length = 452

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 56/97 (57%), Positives = 64/97 (65%), Gaps = 3/97 (3%)
 Frame = -1

Query: 282 MPAQKRPQESS-TPPPAQPRXXXXXEKDDDSQHLNQNQNGEQAREP--DDSDGRASSSDE 112
           MPAQKRP E+S TPPP          KDDDS   NQN + E+A +   +DSDG   SS  
Sbjct: 1   MPAQKRPYETSPTPPPPDE-------KDDDSLQGNQNHD-EEADDSGGEDSDGTTCSSGG 52

Query: 111 EKDGRDDNKAEFITVKLSDIRKEVQCPICLGVIRKTR 1
           EKD       EFITV+LS+IRKEVQCPICLG+IRKTR
Sbjct: 53  EKD-------EFITVRLSEIRKEVQCPICLGIIRKTR 82


>ref|XP_004232907.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
           [Solanum lycopersicum]
          Length = 459

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 56/97 (57%), Positives = 63/97 (64%), Gaps = 3/97 (3%)
 Frame = -1

Query: 282 MPAQKRPQESS-TPPPAQPRXXXXXEKDDDSQHLNQNQNGEQAREP--DDSDGRASSSDE 112
           MPAQKRP E+S TPPP          KDDDS   NQN + E A +   +DSDG   SS  
Sbjct: 1   MPAQKRPYETSPTPPPPDE-------KDDDSLKGNQNHD-EDADDSGGEDSDGTTCSSGG 52

Query: 111 EKDGRDDNKAEFITVKLSDIRKEVQCPICLGVIRKTR 1
           EKD       EFITV+LS+IRKEVQCPICLG+IRKTR
Sbjct: 53  EKD-------EFITVRLSEIRKEVQCPICLGIIRKTR 82


>gb|EPS67741.1| hypothetical protein M569_07032, partial [Genlisea aurea]
          Length = 428

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 45/94 (47%), Positives = 60/94 (63%)
 Frame = -1

Query: 282 MPAQKRPQESSTPPPAQPRXXXXXEKDDDSQHLNQNQNGEQAREPDDSDGRASSSDEEKD 103
           MPAQKRP++S+  PP+ P      +  DDS    QN   ++     +S+G +SS D EK 
Sbjct: 2   MPAQKRPRDSTASPPS-PYPPLDVDNPDDSLQGYQNHEQQKPGNSSESEGTSSSGDGEKQ 60

Query: 102 GRDDNKAEFITVKLSDIRKEVQCPICLGVIRKTR 1
                  E+ITVKL+++RKEVQCPICLG+IRKTR
Sbjct: 61  -------EYITVKLAEVRKEVQCPICLGIIRKTR 87


>ref|XP_006467760.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like isoform
           X2 [Citrus sinensis]
          Length = 471

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 45/110 (40%), Positives = 60/110 (54%), Gaps = 16/110 (14%)
 Frame = -1

Query: 282 MPAQKRPQESSTP----------PPAQPRXXXXXEKDDDSQHLNQNQNGEQAREPDDSDG 133
           MPAQKR  E++T            P++       +  DD+   + + N E+ + P DS  
Sbjct: 1   MPAQKRSYENATTNNNNNNHIIITPSEVVEAVLDDDGDDTLQRDHSNNLEEQQPPQDSTP 60

Query: 132 RASS------SDEEKDGRDDNKAEFITVKLSDIRKEVQCPICLGVIRKTR 1
            A++      SD  +   D  K EF+ VKLSDIRKEVQCPICLG+IRKTR
Sbjct: 61  AAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTR 110


>ref|XP_006467759.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like isoform
           X1 [Citrus sinensis]
          Length = 504

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 45/110 (40%), Positives = 60/110 (54%), Gaps = 16/110 (14%)
 Frame = -1

Query: 282 MPAQKRPQESSTP----------PPAQPRXXXXXEKDDDSQHLNQNQNGEQAREPDDSDG 133
           MPAQKR  E++T            P++       +  DD+   + + N E+ + P DS  
Sbjct: 1   MPAQKRSYENATTNNNNNNHIIITPSEVVEAVLDDDGDDTLQRDHSNNLEEQQPPQDSTP 60

Query: 132 RASS------SDEEKDGRDDNKAEFITVKLSDIRKEVQCPICLGVIRKTR 1
            A++      SD  +   D  K EF+ VKLSDIRKEVQCPICLG+IRKTR
Sbjct: 61  AAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTR 110


>ref|XP_006449375.1| hypothetical protein CICLE_v10015104mg [Citrus clementina]
           gi|557551986|gb|ESR62615.1| hypothetical protein
           CICLE_v10015104mg [Citrus clementina]
          Length = 474

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 45/113 (39%), Positives = 61/113 (53%), Gaps = 19/113 (16%)
 Frame = -1

Query: 282 MPAQKRPQESSTP----------PPAQPRXXXXXEKDDDSQHLNQNQNGEQAREPDDSDG 133
           MPAQKR  E++T            P++       +  DD+   + + N E+ + P DS  
Sbjct: 1   MPAQKRSYENATTNNNNNNHIIITPSEVVEAVLDDDGDDTLQRDHSNNLEEQQPPQDSTP 60

Query: 132 RASSSDEEKDGR---------DDNKAEFITVKLSDIRKEVQCPICLGVIRKTR 1
            A+++  + DG          D  K EF+ VKLSDIRKEVQCPICLG+IRKTR
Sbjct: 61  AAAAAAADVDGNESDRSRSSGDGEKDEFVIVKLSDIRKEVQCPICLGIIRKTR 113


>ref|XP_002329795.1| predicted protein [Populus trichocarpa]
           gi|566193894|ref|XP_006377392.1| hypothetical protein
           POPTR_0011s05530g [Populus trichocarpa]
           gi|550327681|gb|ERP55189.1| hypothetical protein
           POPTR_0011s05530g [Populus trichocarpa]
          Length = 445

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 9/89 (10%)
 Frame = -1

Query: 240 PAQPRXXXXXEKDDDS----QHLNQNQNGEQAREP-----DDSDGRASSSDEEKDGRDDN 88
           PAQ R     +K+DD+    Q  + N N EQ +EP     DD    +  S    +  +D 
Sbjct: 2   PAQKRSYETLQKEDDALLRQQQDHTNNNHEQKQEPRSDIDDDGGVESDRSQPSSNINEDV 61

Query: 87  KAEFITVKLSDIRKEVQCPICLGVIRKTR 1
           K E++ VKLS+IRKEVQCPICLG+IRKTR
Sbjct: 62  KEEYVVVKLSEIRKEVQCPICLGIIRKTR 90


>ref|XP_004982574.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
           [Setaria italica]
          Length = 464

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 44/109 (40%), Positives = 55/109 (50%), Gaps = 15/109 (13%)
 Frame = -1

Query: 282 MPAQKR---------------PQESSTPPPAQPRXXXXXEKDDDSQHLNQNQNGEQAREP 148
           MPAQKR               P  +S PPPA        + +++        NG  A + 
Sbjct: 1   MPAQKRLPPPPSPSAATGAGSPPPASPPPPAAEPAEKKSKLEENGAAAGAVANGN-ANDS 59

Query: 147 DDSDGRASSSDEEKDGRDDNKAEFITVKLSDIRKEVQCPICLGVIRKTR 1
                 A +S+ E +G D    EFI VKL+DIRKEVQCPICLG+IRKTR
Sbjct: 60  GAKAAAAEASESESEGADAVNQEFIPVKLADIRKEVQCPICLGIIRKTR 108


>gb|EOY28193.1| Ring finger protein, putative isoform 1 [Theobroma cacao]
           gi|508780938|gb|EOY28194.1| Ring finger protein,
           putative isoform 1 [Theobroma cacao]
          Length = 442

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
 Frame = -1

Query: 282 MPAQKRPQESSTPPPAQPRXXXXXEKDDDSQHLNQNQNGEQ-AREPDDSDGRASSSDEEK 106
           MPAQKR  E++    +         +DDD   L+   N EQ  +E +D+    + SD   
Sbjct: 1   MPAQKRSSEAAITATSP--------EDDDPLLLDDRNNHEQHQQETEDAADGFTESDRSP 52

Query: 105 DGRDDNKAEFITVKLSDIRKEVQCPICLGVIRKTR 1
              ++ + E+I VK +DIRKEVQCPICLG+IRKTR
Sbjct: 53  SPCNEEEQEYILVKSADIRKEVQCPICLGIIRKTR 87


>gb|EEE64230.1| hypothetical protein OsJ_19063 [Oryza sativa Japonica Group]
          Length = 821

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 43/109 (39%), Positives = 54/109 (49%), Gaps = 15/109 (13%)
 Frame = -1

Query: 282 MPAQKRPQESSTPPPAQPRXXXXXEKDDDSQHLNQNQNGEQAREPDDSD----------- 136
           MPAQKRP   +   PA                 +++ +    R P+DSD           
Sbjct: 1   MPAQKRPAPEAASAPAGGDGHVEGGGAGGGGGADEDAHRGGERSPEDSDAEEEEEEAGGG 60

Query: 135 GRASSSDEEKDG----RDDNKAEFITVKLSDIRKEVQCPICLGVIRKTR 1
           G    +DE++D      D +  EFI VKL DIRKEVQCPICLG+IRKTR
Sbjct: 61  GGGGGADEDRDSPSSESDGDMDEFILVKLMDIRKEVQCPICLGIIRKTR 109


>gb|EOX99468.1| Ring 1b [Theobroma cacao]
          Length = 491

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 44/110 (40%), Positives = 57/110 (51%), Gaps = 7/110 (6%)
 Frame = -1

Query: 309 QLRHIFDQSMPAQKRPQ--ESSTPPPAQPRXXXXXEKDD--DSQH---LNQNQNGEQARE 151
           Q R+  DQ  P  +  Q  E   P P Q +      K D  D  H   L  +   E   +
Sbjct: 27  QSRNEEDQHKPEDETTQLEEEQEPEPEQEQEQQQYHKHDPDDENHQVQLQGDNEDEDEED 86

Query: 150 PDDSDGRASSSDEEKDGRDDNKAEFITVKLSDIRKEVQCPICLGVIRKTR 1
            DDSDG  SS+ +EK        EF+ V+L +IRK+VQCPICLG+I+KTR
Sbjct: 87  EDDSDGSQSSTSQEKP-------EFVFVELPEIRKDVQCPICLGIIKKTR 129


>gb|EXC30589.1| Putative E3 ubiquitin-protein ligase RING1a [Morus notabilis]
          Length = 444

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 38/80 (47%), Positives = 46/80 (57%)
 Frame = -1

Query: 240 PAQPRXXXXXEKDDDSQHLNQNQNGEQAREPDDSDGRASSSDEEKDGRDDNKAEFITVKL 61
           PAQ R     E DD  +  N +   E    P D D     SD      D+NK E+I VKL
Sbjct: 2   PAQKRSHDASEDDDPMEDANLD---EAHHHPADDD---QESDRSPSPSDENKNEYIVVKL 55

Query: 60  SDIRKEVQCPICLGVIRKTR 1
           +++RKEVQCPICLG+IRKTR
Sbjct: 56  AEVRKEVQCPICLGIIRKTR 75


>tpg|DAA49273.1| TPA: putative RING zinc finger domain superfamily protein [Zea
           mays]
          Length = 467

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 40/94 (42%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
 Frame = -1

Query: 279 PAQKRPQESSTP-PPAQPRXXXXXEKDDDSQHLNQNQNGEQAREPDDSDGRASSSDEEKD 103
           P    P  SS P P A+P       + + S     N N       + ++  AS S+ E  
Sbjct: 21  PGAGSPPPSSPPLPTAEPAEKKPKLEVNGSAGAEANGNANDFGAKEGTEVEASESESED- 79

Query: 102 GRDDNKAEFITVKLSDIRKEVQCPICLGVIRKTR 1
             D  K EF+ VKLSD+RKEVQCPICLG+IRKTR
Sbjct: 80  -ADAAKQEFVPVKLSDVRKEVQCPICLGIIRKTR 112


>ref|XP_004487268.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like [Cicer
           arietinum]
          Length = 514

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 27/68 (39%), Positives = 46/68 (67%)
 Frame = -1

Query: 204 DDDSQHLNQNQNGEQAREPDDSDGRASSSDEEKDGRDDNKAEFITVKLSDIRKEVQCPIC 25
           DDD    +++++ ++ +  +D + ++  SDE      + K E++ V+L DIRK+VQCPIC
Sbjct: 80  DDDDDDEDEDEDEDEGKNHNDDNEKSQDSDETPSSDSEEKPEYVYVELQDIRKDVQCPIC 139

Query: 24  LGVIRKTR 1
           LG+I+KTR
Sbjct: 140 LGIIKKTR 147


>gb|EEC79461.1| hypothetical protein OsI_20471 [Oryza sativa Indica Group]
          Length = 451

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 41/125 (32%), Positives = 55/125 (44%), Gaps = 31/125 (24%)
 Frame = -1

Query: 282 MPAQKRPQESSTPPPA---------------------------QPRXXXXXEKDDDSQHL 184
           MPAQKRP   +   PA                            P+       + + +  
Sbjct: 1   MPAQKRPAPEAASAPAGGDGHVEGGGAGGGGGADEDAHRGGERSPKVMNGGGPEKEKERR 60

Query: 183 NQNQNGEQAREPDDSDGRASSSDEEKDG----RDDNKAEFITVKLSDIRKEVQCPICLGV 16
           + + + E+  E     G    +DE++D      D +  EFI VKL DIRKEVQCPICLG+
Sbjct: 61  DADSDAEEEEEEAGGGGGGGGADEDRDSPSSESDGDMDEFILVKLMDIRKEVQCPICLGI 120

Query: 15  IRKTR 1
           IRKTR
Sbjct: 121 IRKTR 125


>gb|AAT44279.1| putative zinc finger protein [Oryza sativa Japonica Group]
          Length = 823

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 41/125 (32%), Positives = 55/125 (44%), Gaps = 31/125 (24%)
 Frame = -1

Query: 282 MPAQKRPQESSTPPPA---------------------------QPRXXXXXEKDDDSQHL 184
           MPAQKRP   +   PA                            P+       + + +  
Sbjct: 1   MPAQKRPAPEAASAPAGGDGHVEGGGAGGGGGADEDAHRGGERSPKVMNGGGPEKEKERR 60

Query: 183 NQNQNGEQAREPDDSDGRASSSDEEKDG----RDDNKAEFITVKLSDIRKEVQCPICLGV 16
           + + + E+  E     G    +DE++D      D +  EFI VKL DIRKEVQCPICLG+
Sbjct: 61  DADSDAEEEEEEAGGGGGGGGADEDRDSPSSESDGDMDEFILVKLMDIRKEVQCPICLGI 120

Query: 15  IRKTR 1
           IRKTR
Sbjct: 121 IRKTR 125


>ref|XP_004961623.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
           [Setaria italica]
          Length = 493

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 34/67 (50%), Positives = 40/67 (59%)
 Frame = -1

Query: 201 DDSQHLNQNQNGEQAREPDDSDGRASSSDEEKDGRDDNKAEFITVKLSDIRKEVQCPICL 22
           DD +     + G      DD D ++S SD E D       EFI VKL D+RKEVQCPICL
Sbjct: 68  DDEEEEGDGEGGAGGGGDDDCDSQSSQSDGEMD-------EFILVKLMDVRKEVQCPICL 120

Query: 21  GVIRKTR 1
           G+IRKTR
Sbjct: 121 GIIRKTR 127


>ref|XP_004134950.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
           [Cucumis sativus] gi|449479584|ref|XP_004155643.1|
           PREDICTED: putative E3 ubiquitin-protein ligase
           RING1a-like [Cucumis sativus]
          Length = 427

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 41/94 (43%), Positives = 50/94 (53%)
 Frame = -1

Query: 282 MPAQKRPQESSTPPPAQPRXXXXXEKDDDSQHLNQNQNGEQAREPDDSDGRASSSDEEKD 103
           MPA+KR  +S       PR            H   N    Q  +  +SD  +SSS  ++D
Sbjct: 1   MPARKRAYDSLDVDLLPPRL-----------HNTFNNERSQDEQSQESDRSSSSSQGDED 49

Query: 102 GRDDNKAEFITVKLSDIRKEVQCPICLGVIRKTR 1
                  EFI VKLSDIRKEVQCPICLG+I+KTR
Sbjct: 50  -------EFIAVKLSDIRKEVQCPICLGIIKKTR 76


>ref|XP_002273941.2| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like [Vitis
           vinifera]
          Length = 534

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 39/87 (44%), Positives = 48/87 (55%)
 Frame = -1

Query: 261 QESSTPPPAQPRXXXXXEKDDDSQHLNQNQNGEQAREPDDSDGRASSSDEEKDGRDDNKA 82
           +E S   PAQ R     E D   +H     +G     P+D DG    SD      +  K 
Sbjct: 96  REISVSMPAQKRAFDAMEGDPLQRH-----HGNHHEPPEDGDGY--ESDRSPSWSNGEKD 148

Query: 81  EFITVKLSDIRKEVQCPICLGVIRKTR 1
           EF+ VKL++IRKEVQCPICLG+IRKTR
Sbjct: 149 EFVIVKLAEIRKEVQCPICLGIIRKTR 175


>ref|XP_002328052.1| predicted protein [Populus trichocarpa]
           gi|566211348|ref|XP_006372726.1| zinc finger family
           protein [Populus trichocarpa]
           gi|550319374|gb|ERP50523.1| zinc finger family protein
           [Populus trichocarpa]
          Length = 497

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 30/69 (43%), Positives = 42/69 (60%)
 Frame = -1

Query: 207 KDDDSQHLNQNQNGEQAREPDDSDGRASSSDEEKDGRDDNKAEFITVKLSDIRKEVQCPI 28
           K+++        +GE+ +E  D     SSS       D+ K EF+ V+L DIRK+VQCPI
Sbjct: 76  KEEEGVEGGGGGDGEEGKEESDGTQSFSSSSSSSSCEDEEKPEFVFVELPDIRKDVQCPI 135

Query: 27  CLGVIRKTR 1
           CLG+I+KTR
Sbjct: 136 CLGIIKKTR 144


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