BLASTX nr result
ID: Rauwolfia21_contig00009138
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00009138
(773 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006437339.1| hypothetical protein CICLE_v10033040mg [Citr... 63 2e-08
ref|XP_002270707.1| PREDICTED: upstream activation factor subuni... 64 3e-08
ref|XP_002270166.1| PREDICTED: upstream activation factor subuni... 62 4e-08
ref|NP_001045781.1| Os02g0130000 [Oryza sativa Japonica Group] g... 64 6e-08
gb|EAY84337.1| hypothetical protein OsI_05714 [Oryza sativa Indi... 64 6e-08
ref|XP_004307291.1| PREDICTED: upstream activation factor subuni... 60 6e-08
ref|XP_006408288.1| hypothetical protein EUTSA_v10021710mg [Eutr... 62 6e-08
ref|XP_006298767.1| hypothetical protein CARUB_v10014869mg [Caps... 64 7e-08
gb|EMJ19758.1| hypothetical protein PRUPE_ppa012921mg [Prunus pe... 61 8e-08
ref|XP_006361226.1| PREDICTED: upstream activation factor subuni... 60 8e-08
ref|NP_566210.1| SWIB/MDM2 domain-containing protein [Arabidopsi... 60 1e-07
gb|AAM65610.1| unknown [Arabidopsis thaliana] 60 1e-07
ref|XP_006298715.1| hypothetical protein CARUB_v10014811mg, part... 59 1e-07
ref|XP_006298716.1| hypothetical protein CARUB_v10014811mg [Caps... 59 1e-07
gb|AAL91165.1| unknown protein [Arabidopsis thaliana] gi|2489967... 62 2e-07
ref|XP_002885945.1| SWIB complex BAF60b domain-containing protei... 62 2e-07
gb|AAM65680.1| unknown [Arabidopsis thaliana] 62 2e-07
ref|NP_565366.1| SWIB/MDM2 domain-containing protein [Arabidopsi... 62 2e-07
ref|XP_002884397.1| hypothetical protein ARALYDRAFT_477604 [Arab... 60 2e-07
ref|XP_006375957.1| hypothetical protein POPTR_0013s06780g [Popu... 58 2e-07
>ref|XP_006437339.1| hypothetical protein CICLE_v10033040mg [Citrus clementina]
gi|568862571|ref|XP_006484753.1| PREDICTED: upstream
activation factor subunit UAF30-like [Citrus sinensis]
gi|557539535|gb|ESR50579.1| hypothetical protein
CICLE_v10033040mg [Citrus clementina]
Length = 137
Score = 63.2 bits (152), Expect(2) = 2e-08
Identities = 29/40 (72%), Positives = 36/40 (90%), Gaps = 1/40 (2%)
Frame = +3
Query: 306 NPQNKREIICDDKLKALF-GKDKIGFLEIAKLLSPHFL*T 422
NP+NKREI+CD+KLKA+F GK+ +GFLEI KLLSPHF+ T
Sbjct: 97 NPENKREILCDEKLKAIFEGKNAVGFLEIGKLLSPHFVKT 136
Score = 22.7 bits (47), Expect(2) = 2e-08
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 217 GIAVPKTLSPVLAEFLGTRQA 279
GI+ +SP LA+FLG +A
Sbjct: 57 GISKVSPVSPALAKFLGAPEA 77
>ref|XP_002270707.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
vinifera] gi|296085458|emb|CBI29190.3| unnamed protein
product [Vitis vinifera]
Length = 115
Score = 63.9 bits (154), Expect(2) = 3e-08
Identities = 30/41 (73%), Positives = 35/41 (85%), Gaps = 1/41 (2%)
Frame = +3
Query: 306 NPQNKREIICDDKLKALF-GKDKIGFLEIAKLLSPHFL*TG 425
NP NK+EI CD+KLK +F GKDK+GFLEIAKLLSPHF+ G
Sbjct: 75 NPTNKKEICCDEKLKTIFDGKDKVGFLEIAKLLSPHFVKIG 115
Score = 21.2 bits (43), Expect(2) = 3e-08
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 217 GIAVPKTLSPVLAEFLG 267
GI P +SP L +FLG
Sbjct: 34 GITKPVPVSPQLGKFLG 50
>ref|XP_002270166.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
vinifera] gi|147798865|emb|CAN68050.1| hypothetical
protein VITISV_015104 [Vitis vinifera]
gi|296090194|emb|CBI40013.3| unnamed protein product
[Vitis vinifera]
Length = 128
Score = 61.6 bits (148), Expect(2) = 4e-08
Identities = 29/40 (72%), Positives = 35/40 (87%), Gaps = 1/40 (2%)
Frame = +3
Query: 306 NPQNKREIICDDKLKALF-GKDKIGFLEIAKLLSPHFL*T 422
NP NKREI+CD+KLK++F GKDK+GFLEI KLLS HF+ T
Sbjct: 88 NPTNKREILCDEKLKSVFEGKDKVGFLEIGKLLSHHFIKT 127
Score = 23.1 bits (48), Expect(2) = 4e-08
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 217 GIAVPKTLSPVLAEFLGTRQA 279
GI P +SP L +FLG +A
Sbjct: 48 GITKPVPVSPALRKFLGVPEA 68
>ref|NP_001045781.1| Os02g0130000 [Oryza sativa Japonica Group]
gi|41052552|dbj|BAD07734.1| putative SWIb
domain-containing protein [Oryza sativa Japonica Group]
gi|41053059|dbj|BAD07989.1| putative SWIb
domain-containing protein [Oryza sativa Japonica Group]
gi|113535312|dbj|BAF07695.1| Os02g0130000 [Oryza sativa
Japonica Group] gi|125580680|gb|EAZ21611.1| hypothetical
protein OsJ_05241 [Oryza sativa Japonica Group]
gi|215741232|dbj|BAG97727.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 131
Score = 63.9 bits (154), Expect = 6e-08
Identities = 30/38 (78%), Positives = 34/38 (89%), Gaps = 1/38 (2%)
Frame = +3
Query: 306 NPQNKREIICDDKLKALF-GKDKIGFLEIAKLLSPHFL 416
NP NKREI CDDKLK+LF GKDK+G +EIAKLLSPHF+
Sbjct: 91 NPANKREINCDDKLKSLFAGKDKVGMMEIAKLLSPHFI 128
>gb|EAY84337.1| hypothetical protein OsI_05714 [Oryza sativa Indica Group]
Length = 131
Score = 63.9 bits (154), Expect = 6e-08
Identities = 30/38 (78%), Positives = 34/38 (89%), Gaps = 1/38 (2%)
Frame = +3
Query: 306 NPQNKREIICDDKLKALF-GKDKIGFLEIAKLLSPHFL 416
NP NKREI CDDKLK+LF GKDK+G +EIAKLLSPHF+
Sbjct: 91 NPANKREINCDDKLKSLFAGKDKVGMMEIAKLLSPHFI 128
>ref|XP_004307291.1| PREDICTED: upstream activation factor subunit spp27-like [Fragaria
vesca subsp. vesca]
Length = 154
Score = 60.1 bits (144), Expect(2) = 6e-08
Identities = 28/38 (73%), Positives = 33/38 (86%), Gaps = 1/38 (2%)
Frame = +3
Query: 306 NPQNKREIICDDKLKALF-GKDKIGFLEIAKLLSPHFL 416
NP NK+EIICD+KLK LF GK+K+ FLEI KLLSPHF+
Sbjct: 114 NPANKKEIICDNKLKELFEGKEKVNFLEIGKLLSPHFV 151
Score = 23.9 bits (50), Expect(2) = 6e-08
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 217 GIAVPKTLSPVLAEFLGTRQA 279
GI P+ +SP L FLG ++
Sbjct: 74 GIMKPRPISPALGSFLGAAES 94
>ref|XP_006408288.1| hypothetical protein EUTSA_v10021710mg [Eutrema salsugineum]
gi|557109434|gb|ESQ49741.1| hypothetical protein
EUTSA_v10021710mg [Eutrema salsugineum]
Length = 146
Score = 61.6 bits (148), Expect(2) = 6e-08
Identities = 29/40 (72%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Frame = +3
Query: 306 NPQNKREIICDDKLKALF-GKDKIGFLEIAKLLSPHFL*T 422
NP +KREI CD+KLK +F GKDK+GFLEI KLLSPHF+ T
Sbjct: 106 NPADKREIFCDEKLKQIFQGKDKVGFLEITKLLSPHFVKT 145
Score = 22.3 bits (46), Expect(2) = 6e-08
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 217 GIAVPKTLSPVLAEFLGT 270
GI +SP LA+FLGT
Sbjct: 66 GIFKATPVSPALAQFLGT 83
>ref|XP_006298767.1| hypothetical protein CARUB_v10014869mg [Capsella rubella]
gi|482567476|gb|EOA31665.1| hypothetical protein
CARUB_v10014869mg [Capsella rubella]
Length = 142
Score = 63.5 bits (153), Expect = 7e-08
Identities = 28/38 (73%), Positives = 35/38 (92%), Gaps = 1/38 (2%)
Frame = +3
Query: 306 NPQNKREIICDDKLKALF-GKDKIGFLEIAKLLSPHFL 416
+PQNKREI+CD+KLK +F GKD++GFLEIAKL+ PHFL
Sbjct: 105 DPQNKREILCDEKLKKIFEGKDRVGFLEIAKLIGPHFL 142
>gb|EMJ19758.1| hypothetical protein PRUPE_ppa012921mg [Prunus persica]
Length = 149
Score = 60.8 bits (146), Expect(2) = 8e-08
Identities = 30/40 (75%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Frame = +3
Query: 306 NPQNKREIICDDKLKALF-GKDKIGFLEIAKLLSPHFL*T 422
NP NKREI CDDKLKA+F GK+K+GFLEI KLLS HF+ T
Sbjct: 109 NPANKREIHCDDKLKAIFEGKEKVGFLEIGKLLSRHFVKT 148
Score = 22.7 bits (47), Expect(2) = 8e-08
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 217 GIAVPKTLSPVLAEFLGTRQA 279
GI P +SP L FLG ++
Sbjct: 69 GIMKPTPISPALGSFLGASES 89
>ref|XP_006361226.1| PREDICTED: upstream activation factor subunit UAF30-like [Solanum
tuberosum]
Length = 122
Score = 59.7 bits (143), Expect(2) = 8e-08
Identities = 29/37 (78%), Positives = 32/37 (86%), Gaps = 1/37 (2%)
Frame = +3
Query: 306 NPQNKREIICDDKLKALF-GKDKIGFLEIAKLLSPHF 413
NP NK+EI CDDKLK +F GKDK+GFLEIAKLLS HF
Sbjct: 82 NPANKKEINCDDKLKTIFAGKDKVGFLEIAKLLSFHF 118
Score = 23.9 bits (50), Expect(2) = 8e-08
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 217 GIAVPKTLSPVLAEFLGTRQ 276
GI P+ +SP L +F+GT +
Sbjct: 42 GILKPQPISPALQKFVGTSE 61
>ref|NP_566210.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
gi|6091763|gb|AAF03473.1|AC009327_12 hypothetical
protein [Arabidopsis thaliana]
gi|26450613|dbj|BAC42418.1| unknown protein [Arabidopsis
thaliana] gi|28372894|gb|AAO39929.1| At3g03590
[Arabidopsis thaliana] gi|332640439|gb|AEE73960.1|
SWIB/MDM2 domain-containing protein [Arabidopsis
thaliana]
Length = 143
Score = 59.7 bits (143), Expect(2) = 1e-07
Identities = 28/40 (70%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Frame = +3
Query: 306 NPQNKREIICDDKLKALF-GKDKIGFLEIAKLLSPHFL*T 422
NP +KREI CD+ LK +F GKDK+GFLEI+KLLSPHF+ T
Sbjct: 103 NPADKREIFCDETLKLIFEGKDKVGFLEISKLLSPHFVKT 142
Score = 23.5 bits (49), Expect(2) = 1e-07
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 217 GIAVPKTLSPVLAEFLGT 270
GI +SPVLA+FLGT
Sbjct: 63 GIFKVTPVSPVLAQFLGT 80
>gb|AAM65610.1| unknown [Arabidopsis thaliana]
Length = 143
Score = 59.7 bits (143), Expect(2) = 1e-07
Identities = 28/40 (70%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Frame = +3
Query: 306 NPQNKREIICDDKLKALF-GKDKIGFLEIAKLLSPHFL*T 422
NP +KREI CD+ LK +F GKDK+GFLEI+KLLSPHF+ T
Sbjct: 103 NPADKREIFCDETLKLIFEGKDKVGFLEISKLLSPHFVKT 142
Score = 23.5 bits (49), Expect(2) = 1e-07
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 217 GIAVPKTLSPVLAEFLGT 270
GI +SPVLA+FLGT
Sbjct: 63 GIFKVTPVSPVLAQFLGT 80
>ref|XP_006298715.1| hypothetical protein CARUB_v10014811mg, partial [Capsella rubella]
gi|482567424|gb|EOA31613.1| hypothetical protein
CARUB_v10014811mg, partial [Capsella rubella]
Length = 159
Score = 59.3 bits (142), Expect(2) = 1e-07
Identities = 27/40 (67%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Frame = +3
Query: 306 NPQNKREIICDDKLKALF-GKDKIGFLEIAKLLSPHFL*T 422
NP +KREI CD+ LK +F GKDK+GFLE++KLLSPHF+ T
Sbjct: 119 NPADKREIFCDETLKLIFEGKDKVGFLEVSKLLSPHFVKT 158
Score = 23.5 bits (49), Expect(2) = 1e-07
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 217 GIAVPKTLSPVLAEFLGT 270
GI +SPVLA+FLGT
Sbjct: 79 GIFKVTPVSPVLAQFLGT 96
>ref|XP_006298716.1| hypothetical protein CARUB_v10014811mg [Capsella rubella]
gi|482567425|gb|EOA31614.1| hypothetical protein
CARUB_v10014811mg [Capsella rubella]
Length = 154
Score = 59.3 bits (142), Expect(2) = 1e-07
Identities = 27/40 (67%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Frame = +3
Query: 306 NPQNKREIICDDKLKALF-GKDKIGFLEIAKLLSPHFL*T 422
NP +KREI CD+ LK +F GKDK+GFLE++KLLSPHF+ T
Sbjct: 114 NPADKREIFCDETLKLIFEGKDKVGFLEVSKLLSPHFVKT 153
Score = 23.5 bits (49), Expect(2) = 1e-07
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 217 GIAVPKTLSPVLAEFLGT 270
GI +SPVLA+FLGT
Sbjct: 74 GIFKVTPVSPVLAQFLGT 91
>gb|AAL91165.1| unknown protein [Arabidopsis thaliana] gi|24899679|gb|AAN65054.1|
unknown protein [Arabidopsis thaliana]
Length = 141
Score = 62.4 bits (150), Expect = 2e-07
Identities = 27/38 (71%), Positives = 35/38 (92%), Gaps = 1/38 (2%)
Frame = +3
Query: 306 NPQNKREIICDDKLKALF-GKDKIGFLEIAKLLSPHFL 416
+PQNKREI+CD+KLK +F G+D++GFLEIAKL+ PHFL
Sbjct: 104 DPQNKREILCDEKLKKIFEGRDRVGFLEIAKLIGPHFL 141
>ref|XP_002885945.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297331785|gb|EFH62204.1| SWIB complex
BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 141
Score = 62.4 bits (150), Expect = 2e-07
Identities = 27/38 (71%), Positives = 35/38 (92%), Gaps = 1/38 (2%)
Frame = +3
Query: 306 NPQNKREIICDDKLKALF-GKDKIGFLEIAKLLSPHFL 416
+PQNKREI+CD+KLK +F G+D++GFLEIAKL+ PHFL
Sbjct: 104 DPQNKREILCDEKLKKIFEGRDRVGFLEIAKLIGPHFL 141
>gb|AAM65680.1| unknown [Arabidopsis thaliana]
Length = 141
Score = 62.4 bits (150), Expect = 2e-07
Identities = 27/38 (71%), Positives = 35/38 (92%), Gaps = 1/38 (2%)
Frame = +3
Query: 306 NPQNKREIICDDKLKALF-GKDKIGFLEIAKLLSPHFL 416
+PQNKREI+CD+KLK +F G+D++GFLEIAKL+ PHFL
Sbjct: 104 DPQNKREILCDEKLKKIFEGRDRVGFLEIAKLIGPHFL 141
>ref|NP_565366.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
gi|13926219|gb|AAK49586.1|AF370580_1 Unknown protein
[Arabidopsis thaliana] gi|3650030|gb|AAC61285.1|
expressed protein [Arabidopsis thaliana]
gi|330251251|gb|AEC06345.1| SWIB/MDM2 domain-containing
protein [Arabidopsis thaliana]
Length = 141
Score = 62.4 bits (150), Expect = 2e-07
Identities = 27/38 (71%), Positives = 35/38 (92%), Gaps = 1/38 (2%)
Frame = +3
Query: 306 NPQNKREIICDDKLKALF-GKDKIGFLEIAKLLSPHFL 416
+PQNKREI+CD+KLK +F G+D++GFLEIAKL+ PHFL
Sbjct: 104 DPQNKREILCDEKLKKIFEGRDRVGFLEIAKLIGPHFL 141
>ref|XP_002884397.1| hypothetical protein ARALYDRAFT_477604 [Arabidopsis lyrata subsp.
lyrata] gi|297330237|gb|EFH60656.1| hypothetical protein
ARALYDRAFT_477604 [Arabidopsis lyrata subsp. lyrata]
Length = 145
Score = 59.7 bits (143), Expect(2) = 2e-07
Identities = 28/40 (70%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Frame = +3
Query: 306 NPQNKREIICDDKLKALF-GKDKIGFLEIAKLLSPHFL*T 422
NP +KREI CD+ LK +F GKDK+GFLEI+KLLSPHF+ T
Sbjct: 105 NPADKREIFCDETLKLIFEGKDKVGFLEISKLLSPHFVKT 144
Score = 22.7 bits (47), Expect(2) = 2e-07
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +1
Query: 238 LSPVLAEFLGT 270
+SPVLA+FLGT
Sbjct: 72 VSPVLAQFLGT 82
>ref|XP_006375957.1| hypothetical protein POPTR_0013s06780g [Populus trichocarpa]
gi|550325143|gb|ERP53754.1| hypothetical protein
POPTR_0013s06780g [Populus trichocarpa]
Length = 135
Score = 58.2 bits (139), Expect(2) = 2e-07
Identities = 27/37 (72%), Positives = 32/37 (86%), Gaps = 1/37 (2%)
Frame = +3
Query: 306 NPQNKREIICDDKLKALF-GKDKIGFLEIAKLLSPHF 413
NP NK+EIICD KLKA+F G+DK+GFL+I KLLS HF
Sbjct: 95 NPTNKKEIICDAKLKAIFDGRDKVGFLDIGKLLSAHF 131
Score = 24.3 bits (51), Expect(2) = 2e-07
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 217 GIAVPKTLSPVLAEFLG 267
GI P +SPVL +FLG
Sbjct: 54 GILKPNPVSPVLGDFLG 70