BLASTX nr result

ID: Rauwolfia21_contig00009054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00009054
         (222 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006358966.1| PREDICTED: 50S ribosomal protein L1, chlorop...    61   2e-07
ref|XP_004251870.1| PREDICTED: 50S ribosomal protein L1-like [So...    56   6e-06

>ref|XP_006358966.1| PREDICTED: 50S ribosomal protein L1, chloroplastic-like [Solanum
           tuberosum]
          Length = 399

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 33/74 (44%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
 Frame = +1

Query: 7   EEVKEDHEIKEQMRRNVELDRERSGIEAGNLDMMRKMLMAEGEKVPFPTLI--RPENSKG 180
           E++ E+ ++K +   + E++RER  IEA     MR+++  E E V FPTLI  + +  K 
Sbjct: 111 EDLPEEEKVKVEGMGDEEMERERRRIEAQKRAAMRRVMNVEEEMVSFPTLINVKSDEKKK 170

Query: 181 KAIYDLKEAIQLVK 222
           KA+YDLKEAI+LVK
Sbjct: 171 KAVYDLKEAIRLVK 184


>ref|XP_004251870.1| PREDICTED: 50S ribosomal protein L1-like [Solanum lycopersicum]
          Length = 398

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
 Frame = +1

Query: 58  ELDRERSGIEAGNLDMMRKMLMAEGEKVPFPTLI--RPENSKGKAIYDLKEAIQLVK 222
           E++RER  IEA     MR+++ AE E + FPTLI  + +  K KA+YDLKEAI+LVK
Sbjct: 127 EMERERRRIEAQKRAAMRRVMNAEEEMISFPTLINVKSDEKKKKAVYDLKEAIRLVK 183


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