BLASTX nr result

ID: Rauwolfia21_contig00008275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00008275
         (684 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB29791.1| hypothetical protein L484_008955 [Morus notabilis]      93   7e-17
gb|AGC78894.1| hypothetical protein (mitochondrion) [Vicia faba]...    86   1e-14
ref|XP_003588306.1| Ribosomal protein S3 [Medicago truncatula] g...    72   2e-10
ref|XP_002531802.1| conserved hypothetical protein [Ricinus comm...    59   1e-06
ref|XP_002535311.1| conserved hypothetical protein [Ricinus comm...    43   3e-06

>gb|EXB29791.1| hypothetical protein L484_008955 [Morus notabilis]
          Length = 69

 Score = 93.2 bits (230), Expect = 7e-17
 Identities = 41/48 (85%), Positives = 42/48 (87%)
 Frame = -2

Query: 683 WEEPLPSCLIREASIHLRRLKVLSEPCWIVTHHTALKPNLWWIPGDKV 540
           WEEPL SCLI  ASIH RRLKVLSEPCWIVTHHTALKPNLWWIP D +
Sbjct: 6   WEEPLLSCLIVGASIHQRRLKVLSEPCWIVTHHTALKPNLWWIPADVI 53


>gb|AGC78894.1| hypothetical protein (mitochondrion) [Vicia faba]
           gi|442803272|gb|AGC79007.1| hypothetical protein
           (mitochondrion) [Vicia faba]
          Length = 602

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 41/44 (93%), Positives = 41/44 (93%)
 Frame = +3

Query: 516 MGQRIKRFDFVSRDPPQVGFESRVMGDYPARFGEHF*SAQVNGS 647
           MGQRIKRFDFVSRD PQVGFESRVMGDYPARFGEHF SA VNGS
Sbjct: 1   MGQRIKRFDFVSRDSPQVGFESRVMGDYPARFGEHFLSALVNGS 44


>ref|XP_003588306.1| Ribosomal protein S3 [Medicago truncatula]
           gi|355477354|gb|AES58557.1| Ribosomal protein S3
           [Medicago truncatula]
          Length = 306

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 33/34 (97%), Positives = 33/34 (97%)
 Frame = +3

Query: 516 MGQRIKRFDFVSRDPPQVGFESRVMGDYPARFGE 617
           MGQRIKRFDFVSRD PQVGFESRVMGDYPARFGE
Sbjct: 1   MGQRIKRFDFVSRDSPQVGFESRVMGDYPARFGE 34


>ref|XP_002531802.1| conserved hypothetical protein [Ricinus communis]
           gi|223528568|gb|EEF30590.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 72

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 35/67 (52%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
 Frame = -2

Query: 683 WEEPLPSCLIREASIHLRRLKVLSEPCWIVTHHTALKPNLW-WIPGDKVKALDPLPHTLR 507
           ++  L S L R  SI   RLKVL EPC I+T++T           GD VKALDPLPHTL+
Sbjct: 6   YKNSLLSYLTRGPSIQQCRLKVLCEPCRIITYYTTHSSQTCDGSQGDNVKALDPLPHTLK 65

Query: 506 CSSPPIK 486
            SS PIK
Sbjct: 66  GSSTPIK 72


>ref|XP_002535311.1| conserved hypothetical protein [Ricinus communis]
           gi|223523476|gb|EEF27072.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 63

 Score = 43.1 bits (100), Expect(3) = 3e-06
 Identities = 22/32 (68%), Positives = 23/32 (71%)
 Frame = -1

Query: 507 MFLPADQGH*GRDRLFFKPLSFGSDKSSPFAQ 412
           M LPA      RDRL FKPLSFGSDKSSPF +
Sbjct: 1   MLLPASDA--ARDRLSFKPLSFGSDKSSPFGR 30



 Score = 28.5 bits (62), Expect(3) = 3e-06
 Identities = 14/22 (63%), Positives = 17/22 (77%), Gaps = 2/22 (9%)
 Frame = -2

Query: 416 LRWSS--LIFPNVQSCSDLRDE 357
           +RWSS  + FPNV+SCS LR E
Sbjct: 34  VRWSSRSVGFPNVKSCSGLRKE 55



 Score = 25.4 bits (54), Expect(3) = 3e-06
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -3

Query: 361 MRKEHRPSAMNE 326
           +RKEHRPS +NE
Sbjct: 52  LRKEHRPSTLNE 63


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