BLASTX nr result
ID: Rauwolfia21_contig00008180
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00008180
(1546 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002315948.2| hypothetical protein POPTR_0010s13740g [Popu... 191 6e-46
gb|EOY02101.1| Ribosomal protein PSRP-3/Ycf65 [Theobroma cacao] 185 5e-44
ref|XP_002311451.2| hypothetical protein POPTR_0008s11750g [Popu... 182 3e-43
ref|XP_002529130.1| Plastid-specific 30S ribosomal protein 3, ch... 179 2e-42
ref|XP_004238943.1| PREDICTED: 30S ribosomal protein 3-1, chloro... 174 1e-40
ref|XP_006362559.1| PREDICTED: 30S ribosomal protein 3, chloropl... 173 2e-40
gb|EXB97159.1| 30S ribosomal protein 3 [Morus notabilis] 171 8e-40
ref|XP_006437700.1| hypothetical protein CICLE_v10032902mg [Citr... 169 3e-39
gb|EMJ17195.1| hypothetical protein PRUPE_ppa011873mg [Prunus pe... 168 5e-39
ref|XP_006437701.1| hypothetical protein CICLE_v10032902mg [Citr... 167 9e-39
ref|XP_003620792.1| 30S ribosomal protein [Medicago truncatula] ... 166 2e-38
ref|XP_006391120.1| hypothetical protein EUTSA_v10019225mg [Eutr... 166 3e-38
emb|CAN68341.1| hypothetical protein VITISV_004015 [Vitis vinifera] 166 3e-38
ref|XP_004513065.1| PREDICTED: 30S ribosomal protein 3, chloropl... 166 3e-38
gb|ESW11139.1| hypothetical protein PHAVU_008G005100g [Phaseolus... 165 6e-38
ref|XP_002283616.1| PREDICTED: 30S ribosomal protein 3, chloropl... 163 2e-37
emb|CBI33662.3| unnamed protein product [Vitis vinifera] 163 2e-37
ref|NP_001077793.1| 30S ribosomal protein 3-1 [Arabidopsis thali... 163 2e-37
ref|XP_006826814.1| hypothetical protein AMTR_s00010p00055110 [A... 163 2e-37
ref|XP_004145640.1| PREDICTED: 30S ribosomal protein 3, chloropl... 163 2e-37
>ref|XP_002315948.2| hypothetical protein POPTR_0010s13740g [Populus trichocarpa]
gi|550329750|gb|EEF02119.2| hypothetical protein
POPTR_0010s13740g [Populus trichocarpa]
Length = 189
Score = 191 bits (486), Expect = 6e-46
Identities = 98/172 (56%), Positives = 119/172 (69%)
Frame = -1
Query: 1321 TSFPSQNPCFVPFRASVSPKPRAASQHSFTILNLKYRTTNRTRKLQASXXXXXXXXXXXX 1142
+S P Q P F+A+ S P+ HS T L+ K + +R ++ +
Sbjct: 17 SSLPCQTPSCKTFKATFSTNPKPNLIHSSTFLDRKRKRVSRNQRY-TTFAAPEALTVETP 75
Query: 1141 XTSDAAATSQESEPSRETTVVDKVGRQVVKPKLVLKFIWMEKNIGLGLDQEIAGHGTVPL 962
+ + ++ES P++ET + + +QV KP+LVLKFIWMEKNIGL LDQ I GHGTVPL
Sbjct: 76 IDTPPSTETEESIPTQETEKAEVLVKQVEKPRLVLKFIWMEKNIGLALDQVIPGHGTVPL 135
Query: 961 SPYFFWPRKDAWEELKITLESKPWISQKKMIILLNQATDIINLWQQSGGNLS 806
SPYFFWPRKDAWEELK TLESKPWISQKKMIILLNQATDIINLWQQSGGNL+
Sbjct: 136 SPYFFWPRKDAWEELKATLESKPWISQKKMIILLNQATDIINLWQQSGGNLT 187
>gb|EOY02101.1| Ribosomal protein PSRP-3/Ycf65 [Theobroma cacao]
Length = 181
Score = 185 bits (469), Expect = 5e-44
Identities = 105/179 (58%), Positives = 116/179 (64%), Gaps = 3/179 (1%)
Frame = -1
Query: 1333 TLARTSFPSQNPCFVPFRASVSPKPRAASQHSFTILNLKYRTTNRTRKLQASXXXXXXXX 1154
TL S P Q P F ++ K +A + S T L + T+R +L AS
Sbjct: 13 TLTWHSLPYQKPALKSFNTAIFFKTKAGLRQSSTGLAKRITPTSRIERLTASAAPETL-- 70
Query: 1153 XXXXXTSDAAATSQESEPSRETTVVDK---VGRQVVKPKLVLKFIWMEKNIGLGLDQEIA 983
A TS E+E TT + V +QV K +LVLKFIWMEKNIGLGLDQ I
Sbjct: 71 --------TAETSTETEIPSVTTSPETEKVVVKQVEKSRLVLKFIWMEKNIGLGLDQVIP 122
Query: 982 GHGTVPLSPYFFWPRKDAWEELKITLESKPWISQKKMIILLNQATDIINLWQQSGGNLS 806
GHGTVPLSPYFFWPRKDAWEELK TLESKPWISQKKMIILLNQATDIINLWQQSGGNLS
Sbjct: 123 GHGTVPLSPYFFWPRKDAWEELKATLESKPWISQKKMIILLNQATDIINLWQQSGGNLS 181
>ref|XP_002311451.2| hypothetical protein POPTR_0008s11750g [Populus trichocarpa]
gi|550332879|gb|EEE88818.2| hypothetical protein
POPTR_0008s11750g [Populus trichocarpa]
Length = 189
Score = 182 bits (462), Expect = 3e-43
Identities = 98/173 (56%), Positives = 116/173 (67%), Gaps = 2/173 (1%)
Frame = -1
Query: 1318 SFPSQNPCFVPFRASVSPKPRAASQHSFTILNLKYRTTNRTRKLQ--ASXXXXXXXXXXX 1145
S P + P F+A++S P+ S T + + R +R ++ A
Sbjct: 18 SLPCRTPSCKTFKATISVNPKPNPIRSSTFFDRERRHVSRNQRYTTFAVPEALAAETPAD 77
Query: 1144 XXTSDAAATSQESEPSRETTVVDKVGRQVVKPKLVLKFIWMEKNIGLGLDQEIAGHGTVP 965
S+AA ES P +ET + V ++V KP+LVLKF+WMEKNIGL LDQ I GHGTVP
Sbjct: 78 APPSNAAG---ESIPIQETEKAELVVKRVEKPRLVLKFVWMEKNIGLALDQVIPGHGTVP 134
Query: 964 LSPYFFWPRKDAWEELKITLESKPWISQKKMIILLNQATDIINLWQQSGGNLS 806
LSPYFFWPRKDAWEELK TLESKPWISQKKMIILLNQATDIINLWQQSGGNL+
Sbjct: 135 LSPYFFWPRKDAWEELKATLESKPWISQKKMIILLNQATDIINLWQQSGGNLT 187
>ref|XP_002529130.1| Plastid-specific 30S ribosomal protein 3, chloroplast precursor,
putative [Ricinus communis] gi|223531409|gb|EEF33243.1|
Plastid-specific 30S ribosomal protein 3, chloroplast
precursor, putative [Ricinus communis]
Length = 180
Score = 179 bits (455), Expect = 2e-42
Identities = 96/177 (54%), Positives = 114/177 (64%), Gaps = 2/177 (1%)
Frame = -1
Query: 1330 LARTSFPSQNPCFVPFRASVSPKPRAASQHSFTILNLKYRTTNRTRKLQASXXXXXXXXX 1151
L + P + P + S+ P+ + +S TIL+ K R +R +L
Sbjct: 11 LTYSPVPHRTPFCKSIKTSIFANPKISLLYSSTILDPKMRPISRNERLTTFASPEALTVE 70
Query: 1150 XXXXTSDAAATSQESEPSRETTV--VDKVGRQVVKPKLVLKFIWMEKNIGLGLDQEIAGH 977
TS+ EP + + V+ +QV KP+LVLKFIWMEKNIGL LDQ I GH
Sbjct: 71 DK--------TSETEEPISDDIIEKVEVAVKQVEKPRLVLKFIWMEKNIGLALDQVIPGH 122
Query: 976 GTVPLSPYFFWPRKDAWEELKITLESKPWISQKKMIILLNQATDIINLWQQSGGNLS 806
GT+PLSPYFFWPRKDAWEELK TLESKPWISQKKMIILLNQATDIINLWQQSGGNL+
Sbjct: 123 GTIPLSPYFFWPRKDAWEELKTTLESKPWISQKKMIILLNQATDIINLWQQSGGNLT 179
>ref|XP_004238943.1| PREDICTED: 30S ribosomal protein 3-1, chloroplastic-like [Solanum
lycopersicum]
Length = 167
Score = 174 bits (440), Expect = 1e-40
Identities = 102/181 (56%), Positives = 116/181 (64%), Gaps = 4/181 (2%)
Frame = -1
Query: 1336 GTLARTSFPSQNPCFVPFRASVSPKPRAASQHSFTILNLKYRTTNRTRKLQASXXXXXXX 1157
G L+ S PSQNP + F++ S SF N K +T R K+ AS
Sbjct: 12 GNLSIPSLPSQNPGYKSFKS--------CSSLSF---NNKGLSTRRIHKIFASAV----- 55
Query: 1156 XXXXXXTSDAAATSQESEPS----RETTVVDKVGRQVVKPKLVLKFIWMEKNIGLGLDQE 989
A A S E E S +E VD + + KP+LVLKFIWMEKNIGLGLDQ
Sbjct: 56 ---------AEAESVEVETSESVVQEIEKVDMKKKVIEKPRLVLKFIWMEKNIGLGLDQV 106
Query: 988 IAGHGTVPLSPYFFWPRKDAWEELKITLESKPWISQKKMIILLNQATDIINLWQQSGGNL 809
+ HG+VPLSPYFFWPRKDAWEELK TLESKPWISQK+MIILLNQATDIINLWQQSGGNL
Sbjct: 107 LPDHGSVPLSPYFFWPRKDAWEELKTTLESKPWISQKQMIILLNQATDIINLWQQSGGNL 166
Query: 808 S 806
+
Sbjct: 167 T 167
>ref|XP_006362559.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Solanum
tuberosum]
Length = 167
Score = 173 bits (438), Expect = 2e-40
Identities = 96/177 (54%), Positives = 111/177 (62%)
Frame = -1
Query: 1336 GTLARTSFPSQNPCFVPFRASVSPKPRAASQHSFTILNLKYRTTNRTRKLQASXXXXXXX 1157
G L+ S PSQNP + F++ S LN K +T R K+ AS
Sbjct: 12 GNLSIPSLPSQNPSYKSFKSCSSLS-----------LNNKGSSTRRIHKIFASAVTE--- 57
Query: 1156 XXXXXXTSDAAATSQESEPSRETTVVDKVGRQVVKPKLVLKFIWMEKNIGLGLDQEIAGH 977
++ A E VD + + KP+LVLKFIWMEKNIGLGLDQ + H
Sbjct: 58 -------AEPIAIETSEAVVLEIEKVDMKKKVIEKPRLVLKFIWMEKNIGLGLDQVLPDH 110
Query: 976 GTVPLSPYFFWPRKDAWEELKITLESKPWISQKKMIILLNQATDIINLWQQSGGNLS 806
G+VPLSPYFFWPRKDAWEELK TLESKPWISQK+MIILLNQATDIINLWQQSGGNL+
Sbjct: 111 GSVPLSPYFFWPRKDAWEELKTTLESKPWISQKQMIILLNQATDIINLWQQSGGNLT 167
>gb|EXB97159.1| 30S ribosomal protein 3 [Morus notabilis]
Length = 181
Score = 171 bits (433), Expect = 8e-40
Identities = 94/169 (55%), Positives = 112/169 (66%), Gaps = 8/169 (4%)
Frame = -1
Query: 1288 PFRASVSPKPRAASQ---HSFTILNLKYRTTNRTRKLQASXXXXXXXXXXXXXTSDAAAT 1118
P + S+ KPR S SF+ T+ +RK S A+A
Sbjct: 29 PIQTSLFAKPRTFSNMNSRSFSEFKPTPTATHSSRKFALS----------------ASAV 72
Query: 1117 SQESEPSRETTVVD--KVG---RQVVKPKLVLKFIWMEKNIGLGLDQEIAGHGTVPLSPY 953
+ E ++TV D K+G + V KP+L+LKFIWMEKNIG+GLDQ I GHGT+PLSPY
Sbjct: 73 AAEDTTVDDSTVEDTEKLGVVVKPVAKPRLILKFIWMEKNIGIGLDQVIPGHGTIPLSPY 132
Query: 952 FFWPRKDAWEELKITLESKPWISQKKMIILLNQATDIINLWQQSGGNLS 806
+FWPRKDAWEELK+ LESKPWISQK+MIILLNQATDIINLWQQSGGNLS
Sbjct: 133 YFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQSGGNLS 181
>ref|XP_006437700.1| hypothetical protein CICLE_v10032902mg [Citrus clementina]
gi|568861902|ref|XP_006484438.1| PREDICTED: 30S ribosomal
protein 3-1, chloroplastic-like isoform X2 [Citrus
sinensis] gi|557539896|gb|ESR50940.1| hypothetical
protein CICLE_v10032902mg [Citrus clementina]
Length = 173
Score = 169 bits (428), Expect = 3e-39
Identities = 97/188 (51%), Positives = 115/188 (61%), Gaps = 3/188 (1%)
Frame = -1
Query: 1360 AMPAGIRPGTLARTSFPSQNPCFVPFRASVSPKPRAASQHSFTILNLKYRTTNRTRKLQA 1181
A+ + + R+SFPSQ P + TIL+ NRT+ +
Sbjct: 6 ALQSTVNGAFTTRSSFPSQKLTVKPTKT--------------TILH-----QNRTKPISR 46
Query: 1180 SXXXXXXXXXXXXXTSDAAATSQESEPSRETTVVDKVG---RQVVKPKLVLKFIWMEKNI 1010
+ +A TS E+ P+ T V K G +Q+ KP+LVLKFIWMEKNI
Sbjct: 47 NQRLVALATPESLTAEEATTTSTETIPA--TPVETKAGVSVKQLEKPRLVLKFIWMEKNI 104
Query: 1009 GLGLDQEIAGHGTVPLSPYFFWPRKDAWEELKITLESKPWISQKKMIILLNQATDIINLW 830
GL LDQ I G+GT+PLS YFFWPRKDAWEELK TLESKPWISQK MIILLNQATDIINLW
Sbjct: 105 GLALDQTIPGYGTIPLSQYFFWPRKDAWEELKTTLESKPWISQKMMIILLNQATDIINLW 164
Query: 829 QQSGGNLS 806
QQSGGNL+
Sbjct: 165 QQSGGNLT 172
>gb|EMJ17195.1| hypothetical protein PRUPE_ppa011873mg [Prunus persica]
Length = 192
Score = 168 bits (426), Expect = 5e-39
Identities = 87/154 (56%), Positives = 104/154 (67%), Gaps = 1/154 (0%)
Frame = -1
Query: 1264 KPRAAS-QHSFTILNLKYRTTNRTRKLQASXXXXXXXXXXXXXTSDAAATSQESEPSRET 1088
KPR ++ S ++ LK R T TR ++ S D T E +
Sbjct: 43 KPRTSNFSVSHSLSELKLRLTQTTRNVKLSAAAESLVAEETAAADDNLTTETPLEKEKLG 102
Query: 1087 TVVDKVGRQVVKPKLVLKFIWMEKNIGLGLDQEIAGHGTVPLSPYFFWPRKDAWEELKIT 908
VV + + KP+LVLKFIWMEKNIG+ LDQ I GHG++PLSPY+FWPRKDAWEELK+
Sbjct: 103 VVV----KPIEKPRLVLKFIWMEKNIGIALDQMIPGHGSIPLSPYYFWPRKDAWEELKVL 158
Query: 907 LESKPWISQKKMIILLNQATDIINLWQQSGGNLS 806
LESKPWISQK+MIILLNQATDIINLWQQSGGNL+
Sbjct: 159 LESKPWISQKQMIILLNQATDIINLWQQSGGNLA 192
>ref|XP_006437701.1| hypothetical protein CICLE_v10032902mg [Citrus clementina]
gi|568861900|ref|XP_006484437.1| PREDICTED: 30S ribosomal
protein 3-1, chloroplastic-like isoform X1 [Citrus
sinensis] gi|557539897|gb|ESR50941.1| hypothetical
protein CICLE_v10032902mg [Citrus clementina]
Length = 174
Score = 167 bits (424), Expect = 9e-39
Identities = 95/187 (50%), Positives = 113/187 (60%), Gaps = 2/187 (1%)
Frame = -1
Query: 1360 AMPAGIRPGTLARTSFPSQNPCFVPFRASVSPKPRAASQHSFTILNLKYRTTNRTRKLQA 1181
A+ + + R+SFPSQ P + TIL+ NRT+ +
Sbjct: 6 ALQSTVNGAFTTRSSFPSQKLTVKPTKT--------------TILH-----QNRTKPISR 46
Query: 1180 SXXXXXXXXXXXXXTSDAAATSQESEPSR--ETTVVDKVGRQVVKPKLVLKFIWMEKNIG 1007
+ +A TS E+ P+ ET +Q+ KP+LVLKFIWMEKNIG
Sbjct: 47 NQRLVALATPESLTAEEATTTSTETIPATPVETKKAGVSVKQLEKPRLVLKFIWMEKNIG 106
Query: 1006 LGLDQEIAGHGTVPLSPYFFWPRKDAWEELKITLESKPWISQKKMIILLNQATDIINLWQ 827
L LDQ I G+GT+PLS YFFWPRKDAWEELK TLESKPWISQK MIILLNQATDIINLWQ
Sbjct: 107 LALDQTIPGYGTIPLSQYFFWPRKDAWEELKTTLESKPWISQKMMIILLNQATDIINLWQ 166
Query: 826 QSGGNLS 806
QSGGNL+
Sbjct: 167 QSGGNLT 173
>ref|XP_003620792.1| 30S ribosomal protein [Medicago truncatula]
gi|217075300|gb|ACJ86010.1| unknown [Medicago truncatula]
gi|355495807|gb|AES77010.1| 30S ribosomal protein
[Medicago truncatula] gi|388491518|gb|AFK33825.1| unknown
[Medicago truncatula]
Length = 161
Score = 166 bits (421), Expect = 2e-38
Identities = 82/109 (75%), Positives = 90/109 (82%)
Frame = -1
Query: 1132 DAAATSQESEPSRETTVVDKVGRQVVKPKLVLKFIWMEKNIGLGLDQEIAGHGTVPLSPY 953
DAAA S + P + V V + KP+LVLKFIWMEKNIG+GLDQ I GHGT+PLSPY
Sbjct: 54 DAAAVSLQPPPQSQKLGV--VVKPTDKPRLVLKFIWMEKNIGIGLDQMIPGHGTIPLSPY 111
Query: 952 FFWPRKDAWEELKITLESKPWISQKKMIILLNQATDIINLWQQSGGNLS 806
+FWPRKDAWEELK LESKPWISQK+MIILLNQATDIINLWQQSGGNLS
Sbjct: 112 YFWPRKDAWEELKELLESKPWISQKQMIILLNQATDIINLWQQSGGNLS 160
>ref|XP_006391120.1| hypothetical protein EUTSA_v10019225mg [Eutrema salsugineum]
gi|557087554|gb|ESQ28406.1| hypothetical protein
EUTSA_v10019225mg [Eutrema salsugineum]
Length = 168
Score = 166 bits (420), Expect = 3e-38
Identities = 82/114 (71%), Positives = 93/114 (81%), Gaps = 6/114 (5%)
Frame = -1
Query: 1129 AAATSQESEPSRETTVVDKVG-RQVVKP-----KLVLKFIWMEKNIGLGLDQEIAGHGTV 968
AA + +EP+ E V D +QVV P ++VLKF+WMEKNIGLGLDQ + GHGT+
Sbjct: 53 AAPETLTAEPASEIDVSDTPEPKQVVNPQEDKARVVLKFVWMEKNIGLGLDQHVPGHGTI 112
Query: 967 PLSPYFFWPRKDAWEELKITLESKPWISQKKMIILLNQATDIINLWQQSGGNLS 806
PLSPYFFWPRKDAWEELK TLE+KPWISQKKMIILLNQATDIINLWQQSGGNL+
Sbjct: 113 PLSPYFFWPRKDAWEELKSTLEAKPWISQKKMIILLNQATDIINLWQQSGGNLT 166
>emb|CAN68341.1| hypothetical protein VITISV_004015 [Vitis vinifera]
Length = 179
Score = 166 bits (420), Expect = 3e-38
Identities = 93/187 (49%), Positives = 118/187 (63%), Gaps = 11/187 (5%)
Frame = -1
Query: 1333 TLARTSFPSQNPCF----VPFRASVSPKPRAASQHSFTILNLKYRTTNRTRKLQASXXXX 1166
T +SFPSQNP F PF ++PKP + T ++ + + + ++L S
Sbjct: 10 TFICSSFPSQNPSFKISKTPFPIPLNPKPLFQRSSTXTP-GIRTKPSMKLQRLAVS---- 64
Query: 1165 XXXXXXXXXTSDAAATSQESEPS-------RETTVVDKVGRQVVKPKLVLKFIWMEKNIG 1007
AA+ ++ +EPS E V+ + + + P+LVLKF+WMEKNIG
Sbjct: 65 ------------AASEARTAEPSTANPISSEENEKVEVIVKVMETPRLVLKFVWMEKNIG 112
Query: 1006 LGLDQEIAGHGTVPLSPYFFWPRKDAWEELKITLESKPWISQKKMIILLNQATDIINLWQ 827
+ LDQ I G+GT PLSPY+FWP KDAWEELK TLESKPWISQKKMIILLN+ATDIINLWQ
Sbjct: 113 VALDQVIPGYGTNPLSPYYFWPGKDAWEELKSTLESKPWISQKKMIILLNEATDIINLWQ 172
Query: 826 QSGGNLS 806
QSGGN S
Sbjct: 173 QSGGNQS 179
>ref|XP_004513065.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Cicer
arietinum]
Length = 164
Score = 166 bits (419), Expect = 3e-38
Identities = 84/153 (54%), Positives = 105/153 (68%), Gaps = 3/153 (1%)
Frame = -1
Query: 1255 AASQHSFTILNLKYRTTNRTRKLQASXXXXXXXXXXXXXTSDAAAT---SQESEPSRETT 1085
+A+ +F++ + + TN + + + S A A S +S PS ++
Sbjct: 12 SATSTTFSLSSFPHIKTNDIKNTKTNPFFSHSHVSTRFTASSAVAQDAISLQSSPSLQSQ 71
Query: 1084 VVDKVGRQVVKPKLVLKFIWMEKNIGLGLDQEIAGHGTVPLSPYFFWPRKDAWEELKITL 905
+ V + KP+LVLKF+WMEKNIG+ LDQ + GHGTVPLSPY+FWPRKDAWEELK L
Sbjct: 72 KLGVVVKPTDKPRLVLKFVWMEKNIGIALDQMVPGHGTVPLSPYYFWPRKDAWEELKELL 131
Query: 904 ESKPWISQKKMIILLNQATDIINLWQQSGGNLS 806
ESKPWISQK+MIILLNQATDIINLWQQSGGNLS
Sbjct: 132 ESKPWISQKQMIILLNQATDIINLWQQSGGNLS 164
>gb|ESW11139.1| hypothetical protein PHAVU_008G005100g [Phaseolus vulgaris]
Length = 164
Score = 165 bits (417), Expect = 6e-38
Identities = 76/110 (69%), Positives = 90/110 (81%)
Frame = -1
Query: 1135 SDAAATSQESEPSRETTVVDKVGRQVVKPKLVLKFIWMEKNIGLGLDQEIAGHGTVPLSP 956
++ A +E+ P+ + + V + KP++VLKFIWMEKNIG+ LDQ I GHGT+PLSP
Sbjct: 55 AETAVVQEEAPPTPQPEKLGVVVKATEKPRIVLKFIWMEKNIGIALDQTIPGHGTIPLSP 114
Query: 955 YFFWPRKDAWEELKITLESKPWISQKKMIILLNQATDIINLWQQSGGNLS 806
Y+FWPRKDAWEELK LESKPWISQK+MIILLNQATDIINLWQQSGGNLS
Sbjct: 115 YYFWPRKDAWEELKELLESKPWISQKQMIILLNQATDIINLWQQSGGNLS 164
>ref|XP_002283616.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like isoform 1
[Vitis vinifera] gi|359488272|ref|XP_003633730.1|
PREDICTED: 30S ribosomal protein 3, chloroplastic-like
isoform 2 [Vitis vinifera]
Length = 176
Score = 163 bits (413), Expect = 2e-37
Identities = 79/116 (68%), Positives = 95/116 (81%), Gaps = 8/116 (6%)
Frame = -1
Query: 1129 AAATSQESEPSRETTV-----VDKVG---RQVVKPKLVLKFIWMEKNIGLGLDQEIAGHG 974
A A S++S +E+ V+K+G + + KP+LVLKFIWMEKNIG+ LDQ I GHG
Sbjct: 61 AVAVSEQSSAPQESLSASPLDVEKLGVVVKPMEKPRLVLKFIWMEKNIGVALDQAIPGHG 120
Query: 973 TVPLSPYFFWPRKDAWEELKITLESKPWISQKKMIILLNQATDIINLWQQSGGNLS 806
T+PLSPY+FWPRKDAWEE+K+ LESKPWISQK+MIILLNQATDIINLWQQSGGNL+
Sbjct: 121 TIPLSPYYFWPRKDAWEEIKVLLESKPWISQKQMIILLNQATDIINLWQQSGGNLA 176
>emb|CBI33662.3| unnamed protein product [Vitis vinifera]
Length = 175
Score = 163 bits (413), Expect = 2e-37
Identities = 79/116 (68%), Positives = 95/116 (81%), Gaps = 8/116 (6%)
Frame = -1
Query: 1129 AAATSQESEPSRETTV-----VDKVG---RQVVKPKLVLKFIWMEKNIGLGLDQEIAGHG 974
A A S++S +E+ V+K+G + + KP+LVLKFIWMEKNIG+ LDQ I GHG
Sbjct: 60 AVAVSEQSSAPQESLSASPLDVEKLGVVVKPMEKPRLVLKFIWMEKNIGVALDQAIPGHG 119
Query: 973 TVPLSPYFFWPRKDAWEELKITLESKPWISQKKMIILLNQATDIINLWQQSGGNLS 806
T+PLSPY+FWPRKDAWEE+K+ LESKPWISQK+MIILLNQATDIINLWQQSGGNL+
Sbjct: 120 TIPLSPYYFWPRKDAWEEIKVLLESKPWISQKQMIILLNQATDIINLWQQSGGNLA 175
>ref|NP_001077793.1| 30S ribosomal protein 3-1 [Arabidopsis thaliana]
gi|332196696|gb|AEE34817.1| 30S ribosomal protein 3-1
[Arabidopsis thaliana]
Length = 163
Score = 163 bits (413), Expect = 2e-37
Identities = 75/95 (78%), Positives = 84/95 (88%), Gaps = 4/95 (4%)
Frame = -1
Query: 1078 DKVGRQVVKP----KLVLKFIWMEKNIGLGLDQEIAGHGTVPLSPYFFWPRKDAWEELKI 911
D +Q +KP ++VLKF+WMEKNIGLGLDQ + GHGT+PLSPYFFWPRKDAWEELK
Sbjct: 67 DNTPQQTIKPDEKSRVVLKFVWMEKNIGLGLDQHVPGHGTIPLSPYFFWPRKDAWEELKS 126
Query: 910 TLESKPWISQKKMIILLNQATDIINLWQQSGGNLS 806
TLE+KPWISQKKMIILLNQATDIINLWQQSGGNL+
Sbjct: 127 TLEAKPWISQKKMIILLNQATDIINLWQQSGGNLT 161
>ref|XP_006826814.1| hypothetical protein AMTR_s00010p00055110 [Amborella trichopoda]
gi|548831243|gb|ERM94051.1| hypothetical protein
AMTR_s00010p00055110 [Amborella trichopoda]
Length = 189
Score = 163 bits (412), Expect = 2e-37
Identities = 78/101 (77%), Positives = 85/101 (84%)
Frame = -1
Query: 1111 ESEPSRETTVVDKVGRQVVKPKLVLKFIWMEKNIGLGLDQEIAGHGTVPLSPYFFWPRKD 932
E EP ET V + KP+LVLKFIW+EKNIGLGLDQ I GHGT+PLSPY+FWPRKD
Sbjct: 90 EIEPE-ETATAKVVVKTPTKPRLVLKFIWLEKNIGLGLDQVIPGHGTIPLSPYYFWPRKD 148
Query: 931 AWEELKITLESKPWISQKKMIILLNQATDIINLWQQSGGNL 809
AWEEL+ LESKPWISQK+MIILLNQATDIINLWQQSGGNL
Sbjct: 149 AWEELRSKLESKPWISQKRMIILLNQATDIINLWQQSGGNL 189
>ref|XP_004145640.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Cucumis
sativus] gi|449484535|ref|XP_004156909.1| PREDICTED: 30S
ribosomal protein 3, chloroplastic-like [Cucumis sativus]
Length = 192
Score = 163 bits (412), Expect = 2e-37
Identities = 89/173 (51%), Positives = 110/173 (63%), Gaps = 1/173 (0%)
Frame = -1
Query: 1321 TSFPSQNPCFVPFRASVSPKPRAASQHSFTILNLKYRTTN-RTRKLQASXXXXXXXXXXX 1145
T+ + P +PF + + T+ L+ R N RT+++ AS
Sbjct: 23 TAQTASKPFKLPFAVRQRTTASSCIPNFHTVFGLQLRRQNFRTQEISASAAPIEAVEAAS 82
Query: 1144 XXTSDAAATSQESEPSRETTVVDKVGRQVVKPKLVLKFIWMEKNIGLGLDQEIAGHGTVP 965
A + S P +E V V + + KP+LVLKFIWMEKNIG+ LDQ I GHGT+P
Sbjct: 83 ELLV-ADDSDSVSSPVKEKLGV--VVKPMEKPRLVLKFIWMEKNIGIALDQMIPGHGTIP 139
Query: 964 LSPYFFWPRKDAWEELKITLESKPWISQKKMIILLNQATDIINLWQQSGGNLS 806
LSPY+FWPRKDAWEELK+ LESKPWISQK+MIILLNQATDIINLWQQ GGNL+
Sbjct: 140 LSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQGGGNLA 192