BLASTX nr result
ID: Rauwolfia21_contig00008044
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00008044
(413 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADJ18449.1| gag/pol protein [Bryonia dioica] 201 6e-50
gb|EXB30863.1| Retrovirus-related Pol polyprotein from transposo... 197 2e-48
ref|XP_004150929.1| PREDICTED: uncharacterized protein LOC101213... 186 4e-45
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 184 1e-44
dbj|BAA22288.1| polyprotein [Oryza australiensis] 181 9e-44
gb|AAD17357.1| contains similarity to retrovirus-related polypro... 179 3e-43
ref|XP_004978922.1| PREDICTED: uncharacterized protein LOC101776... 179 4e-43
gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc... 177 1e-42
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap... 176 3e-42
gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subc... 176 4e-42
gb|EMS50467.1| Retrovirus-related Pol polyprotein from transposo... 174 8e-42
emb|CAE03845.1| OSJNBb0089K06.4 [Oryza sativa Japonica Group] 174 1e-41
gb|EMS67284.1| Spastin [Triticum urartu] 173 2e-41
emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera] 172 3e-41
gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Ja... 171 9e-41
gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subc... 171 9e-41
emb|CBI20118.3| unnamed protein product [Vitis vinifera] 170 2e-40
gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subc... 168 6e-40
emb|CAE02960.2| OSJNBb0050N09.11 [Oryza sativa Japonica Group] 166 2e-39
emb|CAE04259.3| OSJNBa0089N06.20 [Oryza sativa Japonica Group] 166 2e-39
>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
Length = 1292
Score = 201 bits (512), Expect = 6e-50
Identities = 96/138 (69%), Positives = 113/138 (81%), Gaps = 1/138 (0%)
Frame = +3
Query: 3 GEYLLGEFKDYLTHHGIVSQLSSPGTPQQNGVAERRNRTLMEMVRSMMSHASLPVSFWGY 182
GEY+ +F+DYL GI SQLS+P TPQQNGV+ERRNRTL++MVRSMMS+A LP SFWGY
Sbjct: 573 GEYMDSKFQDYLIEFGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSYAQLPDSFWGY 632
Query: 183 ALETAALILNLVPSKSVPRTPYEMWTGRKPSLSHLRIWGCPAYVLAKG-SKLDPRSELCY 359
ALETA ILN VPSKSV TPYE+W GRK SL + RIWGCPA+VL + KL+PRS+LC
Sbjct: 633 ALETAIHILNNVPSKSVLETPYELWKGRKSSLRYFRIWGCPAHVLVQNPKKLEPRSKLCL 692
Query: 360 FIGYPKGTRGGCFYHPKE 413
F+GYPK +RGG FYHP+E
Sbjct: 693 FVGYPKESRGGLFYHPQE 710
>gb|EXB30863.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
notabilis]
Length = 403
Score = 197 bits (500), Expect = 2e-48
Identities = 88/138 (63%), Positives = 115/138 (83%), Gaps = 1/138 (0%)
Frame = +3
Query: 3 GEYLLGEFKDYLTHHGIVSQLSSPGTPQQNGVAERRNRTLMEMVRSMMSHASLPVSFWGY 182
GEYL EF+D+L G+VSQL++PGTPQQNG+AERRN+TL++++RSM+S++SL SFW Y
Sbjct: 155 GEYLDQEFRDFLIEEGVVSQLTTPGTPQQNGIAERRNQTLLDIIRSMLSYSSLHTSFWDY 214
Query: 183 ALETAALILNLVPSKSVPRTPYEMWTGRKPSLSHLRIWGCPAYVL-AKGSKLDPRSELCY 359
AL TAA ILN VPSKS+P+TP E+W G+KPSL H+RIWGCPA+VL K KL+P+SE+C
Sbjct: 215 ALRTAAYILNRVPSKSIPKTPLELWCGQKPSLRHVRIWGCPAHVLKGKTEKLEPKSEVCM 274
Query: 360 FIGYPKGTRGGCFYHPKE 413
F+GYP GT+G FY P++
Sbjct: 275 FVGYPDGTKGDFFYSPED 292
>ref|XP_004150929.1| PREDICTED: uncharacterized protein LOC101213227 [Cucumis sativus]
Length = 513
Score = 186 bits (471), Expect = 4e-45
Identities = 91/138 (65%), Positives = 109/138 (78%), Gaps = 1/138 (0%)
Frame = +3
Query: 3 GEYLLGEFKDYLTHHGIVSQLSSPGTPQQNGVAERRNRTLMEMVRSMMSHASLPVSFWGY 182
GEY+ F+DYL +GI SQLS+P TPQQNGV+ERRN+TL++MVRSMMS + + SFWGY
Sbjct: 344 GEYMDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNQTLLDMVRSMMSFSQMSDSFWGY 403
Query: 183 ALETAALILNLVPSKSVPRTPYEMWTGRKPSLSHLRIWGCPAYVLAKG-SKLDPRSELCY 359
ALETAA IL VPSKSV TPYE+ GRK SL H RIWGCPA+VL + KL+ RS+LC+
Sbjct: 404 ALETAAYILKNVPSKSVSETPYELEKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSKLCF 463
Query: 360 FIGYPKGTRGGCFYHPKE 413
FIGYPK +RGG FY P+E
Sbjct: 464 FIGYPKESRGGLFYDPQE 481
>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
putative retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 184 bits (467), Expect = 1e-44
Identities = 87/138 (63%), Positives = 105/138 (76%), Gaps = 1/138 (0%)
Frame = +3
Query: 3 GEYLLGEFKDYLTHHGIVSQLSSPGTPQQNGVAERRNRTLMEMVRSMMSHASLPVSFWGY 182
GEYL F D+L GIVSQL+ PGTPQ NGV+ERRNRTL++MVRSMMSH LP FWGY
Sbjct: 212 GEYLSQVFSDHLRECGIVSQLTPPGTPQWNGVSERRNRTLLDMVRSMMSHTDLPSPFWGY 271
Query: 183 ALETAALILNLVPSKSVPRTPYEMWTGRKPSLSHLRIWGCPAYVLAK-GSKLDPRSELCY 359
ALET+A +LN PSKSV +TPYE+WTG+ P+LS L+IWGC +Y KL P+S+ CY
Sbjct: 272 ALETSAFMLNRCPSKSVEKTPYEIWTGKVPNLSFLKIWGCESYAKRLITDKLGPKSDKCY 331
Query: 360 FIGYPKGTRGGCFYHPKE 413
F+GYPK T+G FYHP +
Sbjct: 332 FVGYPKETKGYYFYHPTD 349
>dbj|BAA22288.1| polyprotein [Oryza australiensis]
Length = 1317
Score = 181 bits (459), Expect = 9e-44
Identities = 87/138 (63%), Positives = 109/138 (78%), Gaps = 1/138 (0%)
Frame = +3
Query: 3 GEYLLGEFKDYLTHHGIVSQLSSPGTPQQNGVAERRNRTLMEMVRSMMSHASLPVSFWGY 182
GEY+ EF ++L GIV QL+ PGTPQ NGV+ERRNRTL++MVRSMMS + LP+SFWGY
Sbjct: 568 GEYVSQEFGNHLKDCGIVPQLTPPGTPQWNGVSERRNRTLLDMVRSMMSQSDLPLSFWGY 627
Query: 183 ALETAALILNLVPSKSVPRTPYEMWTGRKPSLSHLRIWGCPAYV-LAKGSKLDPRSELCY 359
ALETAAL LN VPSKSV +TPYE+WTG+ PSLS L+IWGC AYV + KL P+S+ C+
Sbjct: 628 ALETAALTLNRVPSKSVEKTPYEIWTGQPPSLSFLKIWGCEAYVKRLQSDKLTPKSDKCF 687
Query: 360 FIGYPKGTRGGCFYHPKE 413
+GYPK T+G FY+ ++
Sbjct: 688 VVGYPKETKGYYFYNREQ 705
>gb|AAD17357.1| contains similarity to retrovirus-related polyproteins [Arabidopsis
thaliana] gi|7267382|emb|CAB77943.1| putative transposon
protein [Arabidopsis thaliana]
Length = 769
Score = 179 bits (455), Expect = 3e-43
Identities = 87/138 (63%), Positives = 104/138 (75%), Gaps = 1/138 (0%)
Frame = +3
Query: 3 GEYLLGEFKDYLTHHGIVSQLSSPGTPQQNGVAERRNRTLMEMVRSMMSHASLPVSFWGY 182
GEYL F D+L GIVSQL+ PGTPQ NGV+ERRN+TL++MVRSMMSH LP SFWGY
Sbjct: 244 GEYLSQVFSDHLRECGIVSQLTPPGTPQGNGVSERRNQTLLDMVRSMMSHTDLPSSFWGY 303
Query: 183 ALETAALILNLVPSKSVPRTPYEMWTGRKPSLSHLRIWGCPAYVLAK-GSKLDPRSELCY 359
ALET +LN PSKSV +TPYE+WTG+ P+LS L+I GC AYV KL P+S+ CY
Sbjct: 304 ALETYVFMLNRCPSKSVEKTPYEIWTGKVPNLSFLKILGCEAYVKRLITDKLGPKSDKCY 363
Query: 360 FIGYPKGTRGGCFYHPKE 413
F+GYPK T+G FYHP +
Sbjct: 364 FVGYPKETKGYYFYHPTD 381
>ref|XP_004978922.1| PREDICTED: uncharacterized protein LOC101776990, partial [Setaria
italica]
Length = 1686
Score = 179 bits (453), Expect = 4e-43
Identities = 86/138 (62%), Positives = 106/138 (76%), Gaps = 1/138 (0%)
Frame = +3
Query: 3 GEYLLGEFKDYLTHHGIVSQLSSPGTPQQNGVAERRNRTLMEMVRSMMSHASLPVSFWGY 182
GEYL EF ++L GIV QL+ PGTPQ+NGV+ERRNRTL++MVRSMMS + LP+SFWGY
Sbjct: 17 GEYLSHEFSNHLKSCGIVPQLTPPGTPQRNGVSERRNRTLLDMVRSMMSQSDLPLSFWGY 76
Query: 183 ALETAALILNLVPSKSVPRTPYEMWTGRKPSLSHLRIWGCPAYV-LAKGSKLDPRSELCY 359
ALETAA LN VPSKSV +TPYE+WTG+ PSLS L+IWGC +V + K+ P+S+ C
Sbjct: 77 ALETAAFTLNRVPSKSVVKTPYEIWTGKVPSLSFLKIWGCEVFVKRLQSDKITPKSDKCI 136
Query: 360 FIGYPKGTRGGCFYHPKE 413
F+GYPK T G FY+ E
Sbjct: 137 FVGYPKETLGYFFYNRSE 154
>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1050
Score = 177 bits (449), Expect = 1e-42
Identities = 85/138 (61%), Positives = 106/138 (76%), Gaps = 1/138 (0%)
Frame = +3
Query: 3 GEYLLGEFKDYLTHHGIVSQLSSPGTPQQNGVAERRNRTLMEMVRSMMSHASLPVSFWGY 182
GEYL EF ++L GIV QL+ PGTPQ NGV+ERRNRTL+++VRSMMS LP+SFW Y
Sbjct: 364 GEYLSLEFGNHLKECGIVPQLTPPGTPQWNGVSERRNRTLLDIVRSMMSQTDLPLSFWAY 423
Query: 183 ALETAALILNLVPSKSVPRTPYEMWTGRKPSLSHLRIWGCPAYV-LAKGSKLDPRSELCY 359
ALE AA LN VPSKSV +TPYE+WTG++PSLS L+IWGC YV + KL P+S+ C+
Sbjct: 424 ALEKAAFTLNKVPSKSVNKTPYEIWTGKRPSLSFLKIWGCEVYVKRLQSDKLTPKSDKCF 483
Query: 360 FIGYPKGTRGGCFYHPKE 413
F+GYPK T+G FY+ +E
Sbjct: 484 FVGYPKETKGYYFYNREE 501
>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
gi|62701883|gb|AAX92956.1| retrotransposon protein,
putative, Ty1-copia sub-class [Oryza sativa Japonica
Group] gi|108864259|gb|ABA92827.2| retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1184
Score = 176 bits (446), Expect = 3e-42
Identities = 85/138 (61%), Positives = 106/138 (76%), Gaps = 1/138 (0%)
Frame = +3
Query: 3 GEYLLGEFKDYLTHHGIVSQLSSPGTPQQNGVAERRNRTLMEMVRSMMSHASLPVSFWGY 182
GEYL EF ++L GIV QL+ PGTPQ NGV+E RNRTL++MVRSMMS +L +SFWGY
Sbjct: 544 GEYLSLEFGNHLKECGIVPQLTPPGTPQWNGVSEWRNRTLLDMVRSMMSQTNLLLSFWGY 603
Query: 183 ALETAALILNLVPSKSVPRTPYEMWTGRKPSLSHLRIWGCPAYV-LAKGSKLDPRSELCY 359
ALET A LN VPSKSV +TPYE+WTG++PSLS L+IWGC YV + KL P+S+ C+
Sbjct: 604 ALETTAFTLNSVPSKSVDKTPYEIWTGKRPSLSFLKIWGCEVYVKRLQSDKLTPKSDKCF 663
Query: 360 FIGYPKGTRGGCFYHPKE 413
F+GYPK T+G FY+ +E
Sbjct: 664 FVGYPKETKGYYFYNQEE 681
>gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1745
Score = 176 bits (445), Expect = 4e-42
Identities = 86/138 (62%), Positives = 105/138 (76%), Gaps = 1/138 (0%)
Frame = +3
Query: 3 GEYLLGEFKDYLTHHGIVSQLSSPGTPQQNGVAERRNRTLMEMVRSMMSHASLPVSFWGY 182
GEYL EF ++L GIV QL+ PGTPQ NGV+ERRNRTL+ MVRSMMS +L +SFWGY
Sbjct: 1044 GEYLSLEFGNHLKGCGIVPQLTPPGTPQWNGVSERRNRTLLNMVRSMMSQTNLLLSFWGY 1103
Query: 183 ALETAALILNLVPSKSVPRTPYEMWTGRKPSLSHLRIWGCPAYV-LAKGSKLDPRSELCY 359
ALETAA LN VPSKSV +TPYE+WTG++PSLS L+IWGC YV + KL P+S C+
Sbjct: 1104 ALETAAFTLNRVPSKSVDKTPYEIWTGKRPSLSFLKIWGCEVYVKRLQSDKLTPKSNKCF 1163
Query: 360 FIGYPKGTRGGCFYHPKE 413
F+GYPK T+G Y+ +E
Sbjct: 1164 FVGYPKETKGYYLYNREE 1181
>gb|EMS50467.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Triticum
urartu]
Length = 1808
Score = 174 bits (442), Expect = 8e-42
Identities = 88/138 (63%), Positives = 101/138 (73%), Gaps = 1/138 (0%)
Frame = +3
Query: 3 GEYLLGEFKDYLTHHGIVSQLSSPGTPQQNGVAERRNRTLMEMVRSMMSHASLPVSFWGY 182
GEYL EF +L GIVSQL+ PGTPQ+NGV+ERRN TL++MVRSMMS LP+SFWGY
Sbjct: 1160 GEYLSYEFVLHLKQCGIVSQLTPPGTPQRNGVSERRNHTLLDMVRSMMSLTDLPLSFWGY 1219
Query: 183 ALETAALILNLVPSKSVPRTPYEMWTGRKPSLSHLRIWGCPAYV-LAKGSKLDPRSELCY 359
ALETAA LN PSKSV TPYE+W G+K LS L++WGC AYV + KL+P SE C
Sbjct: 1220 ALETAAFTLNRAPSKSVETTPYELWFGKKHKLSFLKVWGCDAYVKKLQPDKLEPTSEKCV 1279
Query: 360 FIGYPKGTRGGCFYHPKE 413
FIGYPK T G FYH E
Sbjct: 1280 FIGYPKETVGYTFYHRSE 1297
>emb|CAE03845.1| OSJNBb0089K06.4 [Oryza sativa Japonica Group]
Length = 873
Score = 174 bits (441), Expect = 1e-41
Identities = 84/138 (60%), Positives = 105/138 (76%), Gaps = 1/138 (0%)
Frame = +3
Query: 3 GEYLLGEFKDYLTHHGIVSQLSSPGTPQQNGVAERRNRTLMEMVRSMMSHASLPVSFWGY 182
GEYL EF ++L GIV QL+ PGTPQ N V+ERRNRTL++MV+SMMS LP+ FWGY
Sbjct: 362 GEYLSLEFGNHLKECGIVPQLTPPGTPQWNRVSERRNRTLLDMVQSMMSQTDLPLCFWGY 421
Query: 183 ALETAALILNLVPSKSVPRTPYEMWTGRKPSLSHLRIWGCPAYV-LAKGSKLDPRSELCY 359
ALETAA LN VPSKSV +T YE+WTG++PSLS L+IWGC YV + KL P+S+ C+
Sbjct: 422 ALETAAFTLNRVPSKSVDKTSYEIWTGKRPSLSFLKIWGCEVYVKRLQSDKLTPKSDKCF 481
Query: 360 FIGYPKGTRGGCFYHPKE 413
F+GYPK T+G FY+ +E
Sbjct: 482 FVGYPKETKGYYFYNREE 499
>gb|EMS67284.1| Spastin [Triticum urartu]
Length = 1541
Score = 173 bits (438), Expect = 2e-41
Identities = 87/135 (64%), Positives = 98/135 (72%), Gaps = 1/135 (0%)
Frame = +3
Query: 3 GEYLLGEFKDYLTHHGIVSQLSSPGTPQQNGVAERRNRTLMEMVRSMMSHASLPVSFWGY 182
GEYL EF YL GIVS L+ PGTPQ+NGV+ERRNRTL++MVRSMMS LP+SFWGY
Sbjct: 369 GEYLSYEFGLYLKQCGIVSHLTPPGTPQRNGVSERRNRTLLDMVRSMMSLTDLPLSFWGY 428
Query: 183 ALETAALILNLVPSKSVPRTPYEMWTGRKPSLSHLRIWGCPAYV-LAKGSKLDPRSELCY 359
ALETAA LN PSKSV TPYE W +KP L L++WGC AYV + KL P+SE C
Sbjct: 429 ALETAAFTLNRAPSKSVETTPYEPWFSKKPKLPFLKVWGCDAYVQKLQPDKLKPKSEKCV 488
Query: 360 FIGYPKGTRGGCFYH 404
FIGYPK T G FYH
Sbjct: 489 FIGYPKETIGYTFYH 503
>emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera]
Length = 961
Score = 172 bits (437), Expect = 3e-41
Identities = 79/110 (71%), Positives = 94/110 (85%), Gaps = 1/110 (0%)
Frame = +3
Query: 63 LSSPGTPQQNGVAERRNRTLMEMVRSMMSHASLPVSFWGYALETAALILNLVPSKSVPRT 242
L++PGTPQQNGVAERRNRTL++M+RSMMS+ SL SFWGYAL+T ILN+VPSKS+P T
Sbjct: 398 LTAPGTPQQNGVAERRNRTLLDMMRSMMSYFSLLTSFWGYALQTVVYILNMVPSKSIPNT 457
Query: 243 PYEMWTGRKPSLSHLRIWGCPAYVL-AKGSKLDPRSELCYFIGYPKGTRG 389
P E+W GRKPSL H+RIWGCPA+VL K KL+ RSE+C F+GYPKGTRG
Sbjct: 458 PLELWNGRKPSLRHIRIWGCPAHVLKGKTGKLESRSEVCMFVGYPKGTRG 507
>gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Japonica Group]
Length = 700
Score = 171 bits (433), Expect = 9e-41
Identities = 83/140 (59%), Positives = 106/140 (75%), Gaps = 3/140 (2%)
Frame = +3
Query: 3 GEYLLGEFKDYLTHHGIVSQLSSPGTPQQNGVAERRNRTLMEMVRSMMSHASLPVSFWGY 182
GEY EF ++L GIV QL+ PGTPQ NGV++RRNRTL++MVRSMMS LP+SFWGY
Sbjct: 117 GEYWSLEFGNHLKECGIVPQLTPPGTPQLNGVSKRRNRTLLDMVRSMMSQTDLPLSFWGY 176
Query: 183 ALETAALILNLVPSKSVPRTPYEMWTGRKPSLSHLRIWGCPAYV-LAKGSKLDP--RSEL 353
ALETA +N VPSKS+ +TPYE+WTG++PSLS L+IWGC YV + KL P +S+
Sbjct: 177 ALETAVFTVNRVPSKSMDKTPYEIWTGKRPSLSFLKIWGCEVYVKRLQSDKLTPKSKSDK 236
Query: 354 CYFIGYPKGTRGGCFYHPKE 413
C+F+GYPK T+G FY+ +E
Sbjct: 237 CFFVGYPKETKGYYFYNREE 256
>gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 655
Score = 171 bits (433), Expect = 9e-41
Identities = 83/140 (59%), Positives = 106/140 (75%), Gaps = 3/140 (2%)
Frame = +3
Query: 3 GEYLLGEFKDYLTHHGIVSQLSSPGTPQQNGVAERRNRTLMEMVRSMMSHASLPVSFWGY 182
GEY EF ++L GIV QL+ PGTPQ NGV++RRNRTL++MVRSMMS LP+SFWGY
Sbjct: 117 GEYWSLEFGNHLKECGIVPQLTPPGTPQLNGVSKRRNRTLLDMVRSMMSQTDLPLSFWGY 176
Query: 183 ALETAALILNLVPSKSVPRTPYEMWTGRKPSLSHLRIWGCPAYV-LAKGSKLDP--RSEL 353
ALETA +N VPSKS+ +TPYE+WTG++PSLS L+IWGC YV + KL P +S+
Sbjct: 177 ALETAVFTVNRVPSKSMDKTPYEIWTGKRPSLSFLKIWGCEVYVKRLQSDKLTPKSKSDK 236
Query: 354 CYFIGYPKGTRGGCFYHPKE 413
C+F+GYPK T+G FY+ +E
Sbjct: 237 CFFVGYPKETKGYYFYNREE 256
>emb|CBI20118.3| unnamed protein product [Vitis vinifera]
Length = 1354
Score = 170 bits (430), Expect = 2e-40
Identities = 83/133 (62%), Positives = 99/133 (74%), Gaps = 3/133 (2%)
Frame = +3
Query: 18 GEFKDYLTHHGIVSQLSSPGTPQQNGVAERRNRTLMEMVRSMMSHASLPVSFWGYALETA 197
G F +L HGI +Q + PGTPQQNGVAERRNRTLMEMVRSMMS++S+P+S WG AL+TA
Sbjct: 948 GPFAKFLEKHGIRAQYTMPGTPQQNGVAERRNRTLMEMVRSMMSYSSVPISLWGEALKTA 1007
Query: 198 ALILNLVPSKSVPRTPYEMWTGRKPSLSHLRIWGCPAYVLAKG---SKLDPRSELCYFIG 368
ILN VPSK+VP+TP+E+WTGRKPSL H+ IWGCPA KLD R+ YFIG
Sbjct: 1008 MYILNRVPSKAVPKTPFELWTGRKPSLRHIHIWGCPAEARIYNPHEKKLDSRTVSGYFIG 1067
Query: 369 YPKGTRGGCFYHP 407
YP ++G FY P
Sbjct: 1068 YPDKSKGYRFYCP 1080
>gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 168 bits (426), Expect = 6e-40
Identities = 80/128 (62%), Positives = 99/128 (77%), Gaps = 1/128 (0%)
Frame = +3
Query: 33 YLTHHGIVSQLSSPGTPQQNGVAERRNRTLMEMVRSMMSHASLPVSFWGYALETAALILN 212
Y GIV QL+ PGTPQ NGV+ERRNRTL++MVRSMMS LP+SFWGYALETAA LN
Sbjct: 249 YTDECGIVPQLTPPGTPQWNGVSERRNRTLLDMVRSMMSQTDLPLSFWGYALETAAFTLN 308
Query: 213 LVPSKSVPRTPYEMWTGRKPSLSHLRIWGCPAYV-LAKGSKLDPRSELCYFIGYPKGTRG 389
VPSKS+ +TPYE+WTG++PSLS L+IWGC YV + KL P+S+ +F+GYPK T+G
Sbjct: 309 RVPSKSLDKTPYEIWTGKRPSLSFLKIWGCEVYVKRLQSDKLTPKSDKYFFVGYPKETKG 368
Query: 390 GCFYHPKE 413
FY+ +E
Sbjct: 369 YYFYNREE 376
>emb|CAE02960.2| OSJNBb0050N09.11 [Oryza sativa Japonica Group]
Length = 1405
Score = 166 bits (421), Expect = 2e-39
Identities = 81/133 (60%), Positives = 101/133 (75%), Gaps = 3/133 (2%)
Frame = +3
Query: 18 GEFKDYLTHHGIVSQLSSPGTPQQNGVAERRNRTLMEMVRSMMSHASLPVSFWGYALETA 197
G F +L +GIV+Q S+PG PQQNGVAERRNRTLM+MVRSMMS+++LP+ W AL+TA
Sbjct: 600 GPFARFLLENGIVAQYSTPGEPQQNGVAERRNRTLMDMVRSMMSYSTLPLGLWMEALKTA 659
Query: 198 ALILNLVPSKSVPRTPYEMWTGRKPSLSHLRIWGCPAYVLAKG---SKLDPRSELCYFIG 368
ILN VPSKSVP+TPYE+WTGR PSL+HLR+WG PA KLDP++ C+FIG
Sbjct: 660 IHILNRVPSKSVPKTPYELWTGRVPSLTHLRVWGSPAEAKVFNPNIGKLDPKTVSCHFIG 719
Query: 369 YPKGTRGGCFYHP 407
YP+ ++G FY P
Sbjct: 720 YPERSKGYRFYCP 732
>emb|CAE04259.3| OSJNBa0089N06.20 [Oryza sativa Japonica Group]
Length = 1405
Score = 166 bits (421), Expect = 2e-39
Identities = 81/133 (60%), Positives = 101/133 (75%), Gaps = 3/133 (2%)
Frame = +3
Query: 18 GEFKDYLTHHGIVSQLSSPGTPQQNGVAERRNRTLMEMVRSMMSHASLPVSFWGYALETA 197
G F +L +GIV+Q S+PG PQQNGVAERRNRTLM+MVRSMMS+++LP+ W AL+TA
Sbjct: 600 GPFARFLLENGIVAQYSTPGEPQQNGVAERRNRTLMDMVRSMMSYSTLPLGLWMEALKTA 659
Query: 198 ALILNLVPSKSVPRTPYEMWTGRKPSLSHLRIWGCPAYVLAKG---SKLDPRSELCYFIG 368
ILN VPSKSVP+TPYE+WTGR PSL+HLR+WG PA KLDP++ C+FIG
Sbjct: 660 IHILNRVPSKSVPKTPYELWTGRVPSLTHLRVWGSPAEAKVFNPNIGKLDPKTVSCHFIG 719
Query: 369 YPKGTRGGCFYHP 407
YP+ ++G FY P
Sbjct: 720 YPERSKGYRFYCP 732