BLASTX nr result
ID: Rauwolfia21_contig00006782
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00006782
(829 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFW85570.1| 60S ribosomal protein L39, partial [Zea mays] 118 3e-24
ref|XP_006338352.1| PREDICTED: 60S ribosomal protein L39-3-like ... 112 1e-22
dbj|BAD19088.1| putative 60S ribosomal protein L39 [Oryza sativa... 112 2e-22
ref|XP_004251767.1| PREDICTED: 60S ribosomal protein L39-3-like ... 111 4e-22
gb|EOY29623.1| Ribosomal protein L39 family protein [Theobroma c... 110 5e-22
emb|CBI25619.3| unnamed protein product [Vitis vinifera] 110 5e-22
emb|CBI25617.3| unnamed protein product [Vitis vinifera] 110 5e-22
ref|XP_004964674.1| PREDICTED: 60S ribosomal protein L39-like [S... 110 6e-22
emb|CBI21094.3| unnamed protein product [Vitis vinifera] 109 1e-21
ref|XP_006372129.1| hypothetical protein POPTR_0018s12030g [Popu... 109 1e-21
ref|XP_003603321.1| 60S ribosomal protein L39 [Medicago truncatu... 109 1e-21
ref|XP_002523523.1| ribosomal protein L39e, putative [Ricinus co... 109 1e-21
pdb|3J61|LL Chain l, Localization Of The Large Subunit Ribosomal... 108 2e-21
ref|NP_001174637.1| Os06g0181566 [Oryza sativa Japonica Group] g... 108 2e-21
ref|XP_006450329.1| hypothetical protein CICLE_v10010138mg [Citr... 108 2e-21
ref|NP_001048394.1| Os02g0797200 [Oryza sativa Japonica Group] g... 108 2e-21
gb|AEY84990.1| 60S ribosomal protein L39 [Wolffia australiana] 108 3e-21
gb|AEC10956.1| ribosomal protein L39e [Camellia sinensis] 107 4e-21
ref|XP_006450330.1| hypothetical protein CICLE_v10010138mg [Citr... 107 5e-21
ref|XP_002285383.1| PREDICTED: 60S ribosomal protein L39-3-like ... 107 5e-21
>gb|AFW85570.1| 60S ribosomal protein L39, partial [Zea mays]
Length = 99
Score = 118 bits (295), Expect = 3e-24
Identities = 55/67 (82%), Positives = 55/67 (82%)
Frame = +3
Query: 156 PKPRHPPASSLVPEPKMPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHW 335
P P PP S P MPSHKTF IKKKLAKK RQNRPIPYWIRMRTDNTIRYNAKRRHW
Sbjct: 33 PPPPPPPLPSSPPAEAMPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHW 92
Query: 336 RRTKLGF 356
RRTKLGF
Sbjct: 93 RRTKLGF 99
>ref|XP_006338352.1| PREDICTED: 60S ribosomal protein L39-3-like [Solanum tuberosum]
Length = 51
Score = 112 bits (281), Expect = 1e-22
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = +3
Query: 204 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 356
MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
>dbj|BAD19088.1| putative 60S ribosomal protein L39 [Oryza sativa Japonica Group]
Length = 118
Score = 112 bits (280), Expect = 2e-22
Identities = 55/73 (75%), Positives = 57/73 (78%), Gaps = 7/73 (9%)
Frame = +3
Query: 159 KPRHPPASSL-------VPEPKMPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYN 317
+P PP + L VP MPSHKTF IKKKLAKK RQNRPIPYWIRMRTDNTIRYN
Sbjct: 46 RPLLPPFTHLGFRRRLFVPAATMPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYN 105
Query: 318 AKRRHWRRTKLGF 356
AKRRHWRRTKLGF
Sbjct: 106 AKRRHWRRTKLGF 118
>ref|XP_004251767.1| PREDICTED: 60S ribosomal protein L39-3-like [Solanum lycopersicum]
gi|565353539|ref|XP_006343687.1| PREDICTED: 60S
ribosomal protein L39-3-like [Solanum tuberosum]
gi|565366803|ref|XP_006350074.1| PREDICTED: 60S
ribosomal protein L39-3-like [Solanum tuberosum]
Length = 51
Score = 111 bits (277), Expect = 4e-22
Identities = 50/51 (98%), Positives = 51/51 (100%)
Frame = +3
Query: 204 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 356
MPSHK+FMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKSFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
>gb|EOY29623.1| Ribosomal protein L39 family protein [Theobroma cacao]
Length = 51
Score = 110 bits (276), Expect = 5e-22
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +3
Query: 204 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 356
MPSHKTFMIKKKLAKK RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKTFMIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
>emb|CBI25619.3| unnamed protein product [Vitis vinifera]
Length = 72
Score = 110 bits (276), Expect = 5e-22
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = +3
Query: 201 KMPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 356
KMPSHKTFMIKKKLAKK RQNRPIP+WIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 21 KMPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 72
>emb|CBI25617.3| unnamed protein product [Vitis vinifera]
Length = 70
Score = 110 bits (276), Expect = 5e-22
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = +3
Query: 201 KMPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 356
KMPSHKTFMIKKKLAKK RQNRPIP+WIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 19 KMPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 70
>ref|XP_004964674.1| PREDICTED: 60S ribosomal protein L39-like [Setaria italica]
Length = 51
Score = 110 bits (275), Expect = 6e-22
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +3
Query: 204 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 356
MPSHKTF IKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKTFRIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
>emb|CBI21094.3| unnamed protein product [Vitis vinifera]
Length = 112
Score = 109 bits (273), Expect = 1e-21
Identities = 50/62 (80%), Positives = 55/62 (88%)
Frame = +3
Query: 171 PPASSLVPEPKMPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 350
P ++ + KMPSHKTF+IKKKLAKK RQNRPIP+WIRMRTDNTIRYNAKRRHWRRTKL
Sbjct: 51 PDLAADLSTAKMPSHKTFIIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKL 110
Query: 351 GF 356
GF
Sbjct: 111 GF 112
>ref|XP_006372129.1| hypothetical protein POPTR_0018s12030g [Populus trichocarpa]
gi|550318562|gb|ERP49926.1| hypothetical protein
POPTR_0018s12030g [Populus trichocarpa]
Length = 104
Score = 109 bits (272), Expect = 1e-21
Identities = 51/56 (91%), Positives = 52/56 (92%), Gaps = 1/56 (1%)
Frame = +3
Query: 192 PEP-KMPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 356
P P KMPSHKTF IKKKLAKK RQNRPIP+WIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 49 PRPAKMPSHKTFRIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 104
>ref|XP_003603321.1| 60S ribosomal protein L39 [Medicago truncatula]
gi|355492369|gb|AES73572.1| 60S ribosomal protein L39
[Medicago truncatula] gi|388513831|gb|AFK44977.1|
unknown [Medicago truncatula]
gi|388516927|gb|AFK46525.1| unknown [Medicago
truncatula]
Length = 51
Score = 109 bits (272), Expect = 1e-21
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = +3
Query: 204 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 356
MPSHKTF+IKKKLAKK RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKTFVIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
>ref|XP_002523523.1| ribosomal protein L39e, putative [Ricinus communis]
gi|223537230|gb|EEF38862.1| ribosomal protein L39e,
putative [Ricinus communis]
Length = 67
Score = 109 bits (272), Expect = 1e-21
Identities = 49/52 (94%), Positives = 51/52 (98%)
Frame = +3
Query: 201 KMPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 356
KMPSHKTF+IKKKLAKK RQNRPIP+WIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 16 KMPSHKTFIIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 67
>pdb|3J61|LL Chain l, Localization Of The Large Subunit Ribosomal Proteins Into
A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s
Ribosome gi|57471714|gb|AAW50988.1| ribosomal protein
L39 [Triticum aestivum] gi|326487816|dbj|BAK05580.1|
predicted protein [Hordeum vulgare subsp. vulgare]
gi|326492163|dbj|BAJ98306.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|326511663|dbj|BAJ91976.1|
predicted protein [Hordeum vulgare subsp. vulgare]
gi|475538449|gb|EMT09251.1| 60S ribosomal protein L39
[Aegilops tauschii]
Length = 51
Score = 108 bits (271), Expect = 2e-21
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = +3
Query: 204 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 356
MPSHKTF IK+KLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
>ref|NP_001174637.1| Os06g0181566 [Oryza sativa Japonica Group]
gi|514794821|ref|XP_004973152.1| PREDICTED: 60S
ribosomal protein L39-3-like isoform X2 [Setaria
italica] gi|75251551|sp|Q5SMI4.1|RL393_ORYSJ RecName:
Full=60S ribosomal protein L39-3
gi|55771364|dbj|BAD72315.1| 60S ribosomal protein L39
[Oryza sativa Japonica Group]
gi|55773789|dbj|BAD72572.1| 60S ribosomal protein L39
[Oryza sativa Japonica Group]
gi|125554313|gb|EAY99918.1| hypothetical protein
OsI_21918 [Oryza sativa Indica Group]
gi|125596264|gb|EAZ36044.1| hypothetical protein
OsJ_20351 [Oryza sativa Japonica Group]
gi|255676783|dbj|BAH93365.1| Os06g0181566 [Oryza sativa
Japonica Group]
Length = 51
Score = 108 bits (271), Expect = 2e-21
Identities = 49/51 (96%), Positives = 49/51 (96%)
Frame = +3
Query: 204 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 356
MPSHKTF IKKKLAKK RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKTFQIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
>ref|XP_006450329.1| hypothetical protein CICLE_v10010138mg [Citrus clementina]
gi|568840009|ref|XP_006473965.1| PREDICTED: 60S
ribosomal protein L39-3-like [Citrus sinensis]
gi|568859839|ref|XP_006483440.1| PREDICTED: 60S
ribosomal protein L39-3-like [Citrus sinensis]
gi|209967447|gb|ACJ02352.1| 60S ribosomal protein L39
[Vernicia fordii] gi|257219568|gb|ACV50437.1| 60S
ribosomal protein L39 [Jatropha curcas]
gi|557553555|gb|ESR63569.1| hypothetical protein
CICLE_v10010138mg [Citrus clementina]
Length = 51
Score = 108 bits (271), Expect = 2e-21
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = +3
Query: 204 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 356
MPSHKTFMIKKKLAKK RQNRPIP+WIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 51
>ref|NP_001048394.1| Os02g0797200 [Oryza sativa Japonica Group]
gi|162459376|ref|NP_001105473.1| 60S ribosomal protein
L39 [Zea mays] gi|242063386|ref|XP_002452982.1|
hypothetical protein SORBIDRAFT_04g036030 [Sorghum
bicolor] gi|242094938|ref|XP_002437959.1| hypothetical
protein SORBIDRAFT_10g005510 [Sorghum bicolor]
gi|356507420|ref|XP_003522465.1| PREDICTED: 60S
ribosomal protein L39-2-like [Glycine max]
gi|356515092|ref|XP_003526235.1| PREDICTED: 60S
ribosomal protein L39-2-like isoform X1 [Glycine max]
gi|356515112|ref|XP_003526245.1| PREDICTED: 60S
ribosomal protein L39-2 isoform 1 [Glycine max]
gi|356530615|ref|XP_003533876.1| PREDICTED: 60S
ribosomal protein L39-2-like [Glycine max]
gi|356556588|ref|XP_003546606.1| PREDICTED: 60S
ribosomal protein L39-2-like [Glycine max]
gi|502125052|ref|XP_004498777.1| PREDICTED: 60S
ribosomal protein L39-2-like [Cicer arietinum]
gi|502132450|ref|XP_004501366.1| PREDICTED: 60S
ribosomal protein L39-2-like [Cicer arietinum]
gi|502172688|ref|XP_004515175.1| PREDICTED: 60S
ribosomal protein L39-2-like [Cicer arietinum]
gi|514719418|ref|XP_004954230.1| PREDICTED: 60S
ribosomal protein L39-like [Setaria italica]
gi|1710551|sp|P51425.1|RL39_MAIZE RecName: Full=60S
ribosomal protein L39
gi|55977802|sp|P51426.2|RL392_ORYSJ RecName: Full=60S
ribosomal protein L39-2
gi|306756293|sp|Q6KAJ8.2|RL391_ORYSJ RecName: Full=60S
ribosomal protein L39-1 gi|1177369|emb|CAA64728.1|
ribosomal protein L39 [Zea mays]
gi|47497037|dbj|BAD19090.1| 60S RIBOSOMAL PROTEIN L39
[Oryza sativa Japonica Group]
gi|113537925|dbj|BAF10308.1| Os02g0797200 [Oryza sativa
Japonica Group] gi|125541470|gb|EAY87865.1| hypothetical
protein OsI_09286 [Oryza sativa Indica Group]
gi|125541472|gb|EAY87867.1| hypothetical protein
OsI_09288 [Oryza sativa Indica Group]
gi|125584013|gb|EAZ24944.1| hypothetical protein
OsJ_08725 [Oryza sativa Japonica Group]
gi|125584015|gb|EAZ24946.1| hypothetical protein
OsJ_08727 [Oryza sativa Japonica Group]
gi|149390885|gb|ABR25460.1| 60S ribosomal protein l39
[Oryza sativa Indica Group] gi|195609506|gb|ACG26583.1|
60S ribosomal protein L39 [Zea mays]
gi|195609702|gb|ACG26681.1| 60S ribosomal protein L39
[Zea mays] gi|195609876|gb|ACG26768.1| 60S ribosomal
protein L39 [Zea mays] gi|195609896|gb|ACG26778.1| 60S
ribosomal protein L39 [Zea mays]
gi|195609966|gb|ACG26813.1| 60S ribosomal protein L39
[Zea mays] gi|195610006|gb|ACG26833.1| 60S ribosomal
protein L39 [Zea mays] gi|195610038|gb|ACG26849.1| 60S
ribosomal protein L39 [Zea mays]
gi|195611058|gb|ACG27359.1| 60S ribosomal protein L39
[Zea mays] gi|195612224|gb|ACG27942.1| 60S ribosomal
protein L39 [Zea mays] gi|195641468|gb|ACG40202.1| 60S
ribosomal protein L39 [Zea mays]
gi|195643810|gb|ACG41373.1| 60S ribosomal protein L39
[Zea mays] gi|195659485|gb|ACG49210.1| 60S ribosomal
protein L39 [Zea mays] gi|215767950|dbj|BAH00179.1|
unnamed protein product [Oryza sativa Japonica Group]
gi|215769187|dbj|BAH01416.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|238011942|gb|ACR37006.1| unknown [Zea mays]
gi|238012804|gb|ACR37437.1| unknown [Zea mays]
gi|241916182|gb|EER89326.1| hypothetical protein
SORBIDRAFT_10g005510 [Sorghum bicolor]
gi|241932813|gb|EES05958.1| hypothetical protein
SORBIDRAFT_04g036030 [Sorghum bicolor]
gi|413939321|gb|AFW73872.1| 60S ribosomal protein L39
[Zea mays] gi|552562415|gb|AFW64137.2| 60S ribosomal
protein L39 [Zea mays] gi|561010059|gb|ESW08966.1|
hypothetical protein PHAVU_009G089400g [Phaseolus
vulgaris] gi|561011513|gb|ESW10420.1| hypothetical
protein PHAVU_009G207900g [Phaseolus vulgaris]
gi|561028279|gb|ESW26919.1| hypothetical protein
PHAVU_003G159100g [Phaseolus vulgaris]
Length = 51
Score = 108 bits (270), Expect = 2e-21
Identities = 49/51 (96%), Positives = 49/51 (96%)
Frame = +3
Query: 204 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 356
MPSHKTF IKKKLAKK RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
>gb|AEY84990.1| 60S ribosomal protein L39 [Wolffia australiana]
Length = 51
Score = 108 bits (269), Expect = 3e-21
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = +3
Query: 204 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 356
MPSHK+F+IKKKLAKK RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKSFLIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
>gb|AEC10956.1| ribosomal protein L39e [Camellia sinensis]
Length = 51
Score = 107 bits (268), Expect = 4e-21
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = +3
Query: 204 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 356
MPSHKTFMIKKKLAKK RQNRPIP+WIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKTFMIKKKLAKKIRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 51
>ref|XP_006450330.1| hypothetical protein CICLE_v10010138mg [Citrus clementina]
gi|557553556|gb|ESR63570.1| hypothetical protein
CICLE_v10010138mg [Citrus clementina]
Length = 53
Score = 107 bits (267), Expect = 5e-21
Identities = 48/52 (92%), Positives = 50/52 (96%)
Frame = +3
Query: 201 KMPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 356
+ PSHKTFMIKKKLAKK RQNRPIP+WIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 2 EQPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 53
>ref|XP_002285383.1| PREDICTED: 60S ribosomal protein L39-3-like [Vitis vinifera]
gi|508782121|gb|EOY29377.1| Ribosomal protein L39 family
protein [Theobroma cacao]
Length = 51
Score = 107 bits (267), Expect = 5e-21
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = +3
Query: 204 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 356
MPSHKTF+IKKKLAKK RQNRPIP+WIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKTFIIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 51