BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00006720
         (1311 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...    61   1e-06

>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score = 60.8 bits (146), Expect = 1e-06
 Identities = 70/282 (24%), Positives = 118/282 (41%), Gaps = 27/282 (9%)
 Frame = -1

Query: 1296 AWDQFYRPKEE--VGLNLPNSIN*A------WHLWLD----WIGTFKKSAGSVGSGLTRE 1153
            +W +  +PK E  +GL     +N A      W L  D    W    +K    VG G+   
Sbjct: 703  SWRKICKPKAEGGIGLRSARDMNKALVAKVGWRLLQDKESLWARVVRKKY-KVG-GVQDT 760

Query: 1152 LWII-QPKWS*QGRSLSSVVEHQQGDSNFIGRITWELGSGRPVRFWLDRWLIDKPLLEV- 979
             W+  QP+WS   RS++  +         +  + W  G G  +RFWLDRWL+ +PL+E+ 
Sbjct: 761  SWLKPQPRWSSTWRSVAVGLREV-----VVKGVGWVPGDGCTIRFWLDRWLLQEPLVELG 815

Query: 978  -------LYIFYCADGGSRAHGGSLLGQCYRMEAETVPEFLLQNVQYELLCCCLEA--GN 826
                     I   AD      G +L         E +  +L + V+  LL   ++   GN
Sbjct: 816  TDMIPEGERIKVAADYWLPGSGWNL---------EILGLYLPETVKRRLLSVVVQVFLGN 866

Query: 825  GDQMPWSNSSCGDYSI-SFRV*VAGKLEETLDNGIRFGGLKDLSVNLHTVVGLAMIDWQL 649
            GD++ W  +  G +++ S    + G + +  + G  F  +  L       V + ++   +
Sbjct: 867  GDEISWKGTQDGAFTVRSAYSLLQGDVGDRPNMGSFFNRIWKLITPERVRVFIWLVSQNV 926

Query: 648  ---S*VKASKHWTLLLICWDCPSEMEPVLHALRDWLWTKKVW 532
               +  +  +H +   IC  C    E +LH LRD    + +W
Sbjct: 927  IMTNVERVRRHLSENAICSVCNGAEETILHVLRDCPAMEPIW 968