BLASTX nr result
ID: Rauwolfia21_contig00005361
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00005361
(4712 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 1980 0.0
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 1975 0.0
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 1927 0.0
gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao] 1855 0.0
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 1833 0.0
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 1813 0.0
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 1773 0.0
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s... 1754 0.0
gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlise... 1748 0.0
ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s... 1739 0.0
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [... 1725 0.0
ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu... 1724 0.0
ref|XP_004505923.1| PREDICTED: DNA-directed RNA polymerase III s... 1718 0.0
gb|ESW04135.1| hypothetical protein PHAVU_011G070100g [Phaseolus... 1710 0.0
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 1694 0.0
ref|XP_006279465.1| hypothetical protein CARUB_v10025743mg [Caps... 1689 0.0
ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutr... 1688 0.0
ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arab... 1679 0.0
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s... 1677 0.0
ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A... 1670 0.0
>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Solanum tuberosum]
Length = 1394
Score = 1980 bits (5129), Expect = 0.0
Identities = 1011/1399 (72%), Positives = 1145/1399 (81%), Gaps = 6/1399 (0%)
Frame = -3
Query: 4518 MRRAQATIQFTKQPYIEDVGPRRIESIRFSTFGESEILKGGDVEVYRGVYYDPSKKPIEH 4339
M+R Q ++Q TKQPYIEDVGPR+I+SI+FS F ESEILK +VEVY G+YY+ +KKPI++
Sbjct: 1 MKRIQNSLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKSAEVEVYLGLYYESTKKPIQN 60
Query: 4338 GLLDPHMGPTLKGGLCETCHGTFSQCPGHYGYLTLALPVYHAGYLTNILDILKCICKQCS 4159
GLLDP MGP K G CETCHG F +CPGHYGYL LALPVY+ GYL ++DILKCICK CS
Sbjct: 61 GLLDPRMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCS 120
Query: 4158 SVLLAEKDRLAFLQKMRNPKMEPLGKTQLQKKVVEKCNRLVASGRKATVCPKCGYINGMV 3979
S+LL +K+R L+KMRNP+ E L K++L KKVV++CN + A G+K C KCGY+NGMV
Sbjct: 121 SILLDDKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAM-AGGQKTATCSKCGYMNGMV 179
Query: 3978 KKNTKMLGIIHER-SRVNDSSSNEYRSALSHIQEFNASSCSVPDEINPKVVYSLLKNVKD 3802
KK L I HE+ +R+ D E A+S +E AS SVP E++PKVVYSL KN+ D
Sbjct: 180 KK--LQLKITHEQGNRILD----EINVAISDKRELRAS-VSVPPELDPKVVYSLFKNMSD 232
Query: 3801 EDCELLYLSDRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLHQ 3622
EDCELLYLSDRPEKL+ VDGGTQSNENDITERLKRIIQANASLHQ
Sbjct: 233 EDCELLYLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQ 292
Query: 3621 EISDTSLPTKSLNAWIDLQVEVAQYINSDVRGIPFSAPTTKPLSGFVQRLKGKQGRFRGN 3442
E+SD+S P KSLN WIDLQ+EVAQYINSDVRG+P +PLSGF QRLKGKQGRFRGN
Sbjct: 293 EMSDSS-PVKSLNLWIDLQMEVAQYINSDVRGVPLHMQAQRPLSGFTQRLKGKQGRFRGN 351
Query: 3441 LSGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQCVRNGPNKY 3262
LSGKRVEYTGRTVISPDPNLKITEVA+PILMA+ILTYPERVS HNIEKLRQCVRNGPNKY
Sbjct: 352 LSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKY 411
Query: 3261 PGAKFIKQTGADPISLISAARKRYADELKFGDIVDRHLEDGDVVLFNRQPSLHRMSIMCH 3082
PGAKFI+ ISL+ +RKR+ADELKFG IVDRHLEDGD+VLFNRQPSLHRMSIM H
Sbjct: 412 PGAKFIRHPDGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSH 471
Query: 3081 RARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGE 2902
RARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPK+GE
Sbjct: 472 RARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGE 531
Query: 2901 ILVASTQDFLTSSFLITRKDTFYDRASFSLICSYMGNGMDQIDLPTPALVKPVELWTGKQ 2722
ILVASTQDFLTSSFLITRKDTFY+RASFSLICSYMG+ MD DLP+PA +KPVELWTGKQ
Sbjct: 532 ILVASTQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQ 591
Query: 2721 LFNILLRPHTQMRVFLNLTVAEKNYMKPKETMCLNDGFVYFRNSELISGQLGKATLGNGN 2542
LF++LLRP+++MRV++NLTV EK+Y ETMC +DGFVYFRNSELISGQLGKATLGNGN
Sbjct: 592 LFHMLLRPYSKMRVYVNLTVTEKSYSGKGETMCPSDGFVYFRNSELISGQLGKATLGNGN 651
Query: 2541 KDGLYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPGKLITEKEKKIRS 2362
KDGLYSVLLRDY SHAAATCMNRLAKLSARWIGNHGFSIGIDDV P L+ +K+ +I
Sbjct: 652 KDGLYSVLLRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHR 711
Query: 2361 GYEECDNFIDNFNKGQLELQPGHDAALTLEAKITQVLNNIRGETAKVCMDNLQWRNSPLI 2182
Y++C++ I FN+G+L +QPG DAA TLEA++T LN +R + K+CM L WRNSPLI
Sbjct: 712 NYKKCEDCITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLI 771
Query: 2181 MSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPKKSKIPLAKGFVANSFY 2002
MSQCGSKGSPINISQM+ACVGQQSVGGRRAP+GFIDRSLPHFP KSK P AKGFVA+SF+
Sbjct: 772 MSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFF 831
Query: 2001 SGLTATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDYTVRNASASIIQ 1822
GL+ATEFFFHTM GREGLVDTAVKTADTGYMSRRLMKALEDL+++YD TVRNASA I+Q
Sbjct: 832 DGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQ 891
Query: 1821 FFYGDDCMDPSQMEEKSGQPLNFDRLLMKVKATCPADDQISLSPLEICERTDERLSEHDM 1642
F YGDD MDPSQMEEK G+PLNF RL MKVKATCP + SLS EICE +ERLS HDM
Sbjct: 892 FMYGDDGMDPSQMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSYHDM 951
Query: 1641 TPEGGCSEAFRDLLSKFLKEKCVANLRNTIRNLEWNGDQHGGEDRRFLEKFCPNISGITS 1462
TPEGGCSEAFR LS FL + L+N +L +Q+ G+DR +LEK NISGIT
Sbjct: 952 TPEGGCSEAFRSSLSDFLIKNLAETLKNLRESLLLGEEQYEGDDRGYLEKIALNISGITK 1011
Query: 1461 RQLEVFLRVCISRYHAKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVP 1282
RQL+VFL CISRYH K+ GEPGTQMTLKTFHFAGVASMNVTLGVP
Sbjct: 1012 RQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVP 1071
Query: 1281 RIKEIIDAKKNISTPIITAKLEREYNPKEARIAKARIEKTLLSQVAKSIKIVMSARLASI 1102
RIKEII+A K I+TPIIT KL N AR+ KARIEKTLL QVAKS+KIV+++RLASI
Sbjct: 1072 RIKEIINAAKKITTPIITTKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVLASRLASI 1131
Query: 1101 VITLDLEMIQALRLHVDAYRVKQSILQTKRLKLKEQHVKVLNTRKLEVVPQADKSKLHFE 922
I+LD+E IQ +L +DAY VKQSILQT ++KLKE +KVLN RKLEV PQA+K KLHFE
Sbjct: 1132 AISLDMETIQVSQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQANKDKLHFE 1191
Query: 921 LHTIKNKLPMVVVSGINTVERVIINKEDK-----EKKMPKYNLFVEGMGLLEVMGTEGVE 757
LH +KNKLP VVV GI TV+R ++NKE + + K Y L VEG GLL VMG EGV+
Sbjct: 1192 LHRLKNKLPAVVVKGITTVQRAVVNKEQQKDRKNDVKGETYELLVEGTGLLAVMGIEGVD 1251
Query: 756 GCETKSNHIMEILRTLGIEAARSSIIDEIRTTMSSHGMTIDIRHMMLLADLMTSKGEVLG 577
G TKSNHIME+ TLGIEAAR SIIDEI TMSSHGMTID+RHMMLLADLMT KGEVLG
Sbjct: 1252 GRYTKSNHIMEVQNTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLG 1311
Query: 576 ITRTGVQKMKDSVLMLASFEKTADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKV 397
ITR GVQKMKDSVLMLASFEKT DHLF+A+VNGR+DKIEGV+ECIIMGIPM +GTGM K+
Sbjct: 1312 ITRHGVQKMKDSVLMLASFEKTTDHLFNASVNGRDDKIEGVTECIIMGIPMTIGTGMFKL 1371
Query: 396 KQRTLQQEVKLNYALDPII 340
+QR ++V+LNY DPII
Sbjct: 1372 RQRV--EQVELNYQPDPII 1388
>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum
lycopersicum]
Length = 1390
Score = 1975 bits (5117), Expect = 0.0
Identities = 1008/1399 (72%), Positives = 1147/1399 (81%), Gaps = 6/1399 (0%)
Frame = -3
Query: 4518 MRRAQATIQFTKQPYIEDVGPRRIESIRFSTFGESEILKGGDVEVYRGVYYDPSKKPIEH 4339
M RAQ ++Q TKQPYIEDVGPR+I+SI+FS F ESEILK +VEVY G+YY+ +KKPI++
Sbjct: 1 MNRAQESLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKLAEVEVYLGLYYESTKKPIQN 60
Query: 4338 GLLDPHMGPTLKGGLCETCHGTFSQCPGHYGYLTLALPVYHAGYLTNILDILKCICKQCS 4159
GLLDP MGP K G CETCHG F +CPGHYGYL LALPVY+ GYL ++DILKCICK CS
Sbjct: 61 GLLDPRMGPPNKSGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCS 120
Query: 4158 SVLLAEKDRLAFLQKMRNPKMEPLGKTQLQKKVVEKCNRLVASGRKATVCPKCGYINGMV 3979
S+LL +K+R L+KMRNP+ E L K++L K+VV++CN + A G+K C KCGY+NGMV
Sbjct: 121 SILLDDKERRDILKKMRNPRTEFLKKSELHKRVVKRCNAM-AGGQKTATCSKCGYMNGMV 179
Query: 3978 KKNTKMLGIIHER-SRVNDSSSNEYRSALSHIQEFNASSCSVPDEINPKVVYSLLKNVKD 3802
KK L I HE+ +R+ D E A+S +E AS SVP EI+PKVVYSL KN+ D
Sbjct: 180 KK--LQLKITHEQGNRILD----EINVAISDKRELRAS-VSVPPEIDPKVVYSLFKNMSD 232
Query: 3801 EDCELLYLSDRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLHQ 3622
EDCELLYLSDRPEKL+ VDGGTQSNENDITERLKRIIQANASLHQ
Sbjct: 233 EDCELLYLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQ 292
Query: 3621 EISDTSLPTKSLNAWIDLQVEVAQYINSDVRGIPFSAPTTKPLSGFVQRLKGKQGRFRGN 3442
E+SD+S P KSLN WIDLQ+EVAQYINSDVRG+P +PLSGF QRLKGKQGRFRGN
Sbjct: 293 EMSDSS-PVKSLNQWIDLQMEVAQYINSDVRGVPLQMQPPRPLSGFTQRLKGKQGRFRGN 351
Query: 3441 LSGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQCVRNGPNKY 3262
LSGKRVEYTGRTVISPDPNLKITEVA+PILMA+ILTYPERVS HNIEKLRQCVRNGPNKY
Sbjct: 352 LSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKY 411
Query: 3261 PGAKFIKQTGADPISLISAARKRYADELKFGDIVDRHLEDGDVVLFNRQPSLHRMSIMCH 3082
PGAKFI+ + +SL+ ++RKRYADELKFG IVDRHLEDGD+VLFNRQPSLHRMSIM H
Sbjct: 412 PGAKFIRHPDGNEMSLMFSSRKRYADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSH 471
Query: 3081 RARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGE 2902
RARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPK+GE
Sbjct: 472 RARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGE 531
Query: 2901 ILVASTQDFLTSSFLITRKDTFYDRASFSLICSYMGNGMDQIDLPTPALVKPVELWTGKQ 2722
ILVASTQDFLTSSFLITRKDTFY+RASFSLICSYMG+ MD DLP+PA +KPVELWTGKQ
Sbjct: 532 ILVASTQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQ 591
Query: 2721 LFNILLRPHTQMRVFLNLTVAEKNYMKPKETMCLNDGFVYFRNSELISGQLGKATLGNGN 2542
LF++LLRP+++MRV++NLT+ EK+Y ETMC +DGFVYFRNSELISGQLGKATLGNGN
Sbjct: 592 LFHVLLRPYSKMRVYVNLTLTEKSYSGKGETMCSSDGFVYFRNSELISGQLGKATLGNGN 651
Query: 2541 KDGLYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPGKLITEKEKKIRS 2362
KDGLYSVLLRDY SHAAATCMNRLAKLSARWIGNHGFSIGIDDV P L+ +K+ +I
Sbjct: 652 KDGLYSVLLRDYESHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHR 711
Query: 2361 GYEECDNFIDNFNKGQLELQPGHDAALTLEAKITQVLNNIRGETAKVCMDNLQWRNSPLI 2182
Y++C++ I FN+G+L +QPG DAA TLEA++T LN +R + K+CM L WRNSPLI
Sbjct: 712 NYKKCEDCITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLI 771
Query: 2181 MSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPKKSKIPLAKGFVANSFY 2002
MSQCGSKGSPINISQM+ACVGQQSVGGRRAP+GFIDRSLPHFP KSK P AKGFVA+SF+
Sbjct: 772 MSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFF 831
Query: 2001 SGLTATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDYTVRNASASIIQ 1822
GL+ATEFFFHTM GREGLVDTAVKTADTGYMSRRLMKALEDL+++YD TVRNASA I+Q
Sbjct: 832 DGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQ 891
Query: 1821 FFYGDDCMDPSQMEEKSGQPLNFDRLLMKVKATCPADDQISLSPLEICERTDERLSEHDM 1642
F YGDD MDPS+MEEK G+PLNF RL MKVKATCP + SLS EICE +ERLS HDM
Sbjct: 892 FMYGDDGMDPSRMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSYHDM 951
Query: 1641 TPEGGCSEAFRDLLSKFLKEKCVANLRNTIRNLEWNGDQHGGEDRRFLEKFCPNISGITS 1462
TPEGGCSEAFR LS FL + L+N +L +Q+ G+DR +LEK NISGIT
Sbjct: 952 TPEGGCSEAFRASLSDFLIKSLAETLKNLRESLLLGEEQYEGDDRGYLEKIVLNISGITK 1011
Query: 1461 RQLEVFLRVCISRYHAKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVP 1282
+QL+VFL CISRYH K+ GEPGTQMTLKTFHFAGVASMNVTLGVP
Sbjct: 1012 KQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVP 1071
Query: 1281 RIKEIIDAKKNISTPIITAKLEREYNPKEARIAKARIEKTLLSQVAKSIKIVMSARLASI 1102
RIKEII+A K I+TPIITAKL N AR+ KARIEKTLL QVAKS+KIV+++RLASI
Sbjct: 1072 RIKEIINAAKKITTPIITAKLLSAGNLTAARMIKARIEKTLLGQVAKSVKIVLASRLASI 1131
Query: 1101 VITLDLEMIQALRLHVDAYRVKQSILQTKRLKLKEQHVKVLNTRKLEVVPQADKSKLHFE 922
I+LD+E IQ +L +DAY VKQSILQT ++KLKE +KVLN RKLEV PQA+K KLHFE
Sbjct: 1132 AISLDMETIQVSQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQANKDKLHFE 1191
Query: 921 LHTIKNKLPMVVVSGINTVERVIINKEDK-----EKKMPKYNLFVEGMGLLEVMGTEGVE 757
LH +KNKLP VVV GI TV+R ++NKE + + K Y L VEG GLL VMG EGV+
Sbjct: 1192 LHRLKNKLPAVVVKGITTVQRAVVNKEQQKDRKNDVKGETYELLVEGTGLLAVMGIEGVD 1251
Query: 756 GCETKSNHIMEILRTLGIEAARSSIIDEIRTTMSSHGMTIDIRHMMLLADLMTSKGEVLG 577
G TKSNHIME+ TLGIEAAR SIIDEI TMSSHGMTID+RHMMLLADLMT KGEVLG
Sbjct: 1252 GRYTKSNHIMEVQHTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLG 1311
Query: 576 ITRTGVQKMKDSVLMLASFEKTADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKV 397
ITR GVQKMKDSVLMLASFEKT DHLF+A+VNGR+DKIEGV+ECIIMGIPM +GTGM K+
Sbjct: 1312 ITRHGVQKMKDSVLMLASFEKTTDHLFNASVNGRDDKIEGVTECIIMGIPMTIGTGMFKL 1371
Query: 396 KQRTLQQEVKLNYALDPII 340
+QR + V+LNY DP++
Sbjct: 1372 RQRV--EHVELNYQPDPMM 1388
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 1927 bits (4992), Expect = 0.0
Identities = 987/1389 (71%), Positives = 1130/1389 (81%), Gaps = 2/1389 (0%)
Frame = -3
Query: 4497 IQFTKQPYIEDVGPRRIESIRFSTFGESEILKGGDVEVYRGVYYDPSKKPIEHGLLDPHM 4318
IQFTK+PYIEDVGPR+IESIRF+ F ESEI K +V+V+RGVYYD ++KPIE+GLLDP M
Sbjct: 5 IQFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLLDPRM 64
Query: 4317 GPTLKGGLCETCHGTFSQCPGHYGYLTLALPVYHAGYLTNILDILKCICKQCSSVLLAEK 4138
GP K G C TC G F CPGH GYLTLALPVY+ GYL+ I+DILKCICK CS VLL EK
Sbjct: 65 GPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLLDEK 124
Query: 4137 DRLAFLQKMRNPKMEPLGKTQLQKKVVEKCNRLVASGRKATVCPKCGYINGMVKKNTKML 3958
+L+KMR+ KME L K +L KK+V+KC + AS +KA C +CGY+NG+VKK +L
Sbjct: 125 ASKDYLKKMRSQKMEALKKAELMKKIVQKCTAM-ASSKKAVKCSRCGYMNGIVKKAVSVL 183
Query: 3957 GIIHERSRVNDSSSNEYRSALSHIQEFNASSCSVPDEINPKVVYSLLKNVKDEDCELLYL 3778
GIIH+RS++ D S E SA+SH +E AS SV D +NP V SL K + DEDC+LL L
Sbjct: 184 GIIHDRSKIADGSLEECSSAISHTKESKASF-SVVDILNPVKVLSLFKRMMDEDCDLLNL 242
Query: 3777 SDRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLHQEISDTSLP 3598
++RPEKL+ +DGGTQSNEND+TERLKRIIQANASLHQE+ DT
Sbjct: 243 AERPEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQDTGST 302
Query: 3597 TKSLNAWIDLQVEVAQYINSDVRGIPFSAPTTKPLSGFVQRLKGKQGRFRGNLSGKRVEY 3418
+K L W LQ+EVAQYINSDVRG+P + +PLSGFVQRLKGKQGRFRGNLSGKRVEY
Sbjct: 303 SKCLAGWDYLQIEVAQYINSDVRGVPLAMQAARPLSGFVQRLKGKQGRFRGNLSGKRVEY 362
Query: 3417 TGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKFIKQ 3238
TGRTVISPDPNLKITEVA+PILMA+IL+YPERVSHHNIEKLRQC+ NGP KYPGAK I+
Sbjct: 363 TGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAKLIRY 422
Query: 3237 TGADPISLISAARKRYADELKFGDIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWR 3058
SL+ + RKR+ADELK+G IV+RHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWR
Sbjct: 423 PDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWR 482
Query: 3057 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 2878
TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD
Sbjct: 483 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 542
Query: 2877 FLTSSFLITRKDTFYDRASFSLICSYMGNGMDQIDLPTPALVKPVELWTGKQLFNILLRP 2698
FLTSSFLITRKDTFYDRA+FSL+CSYMG+GMD +DLPTPA++KPVELWTGKQLFN+LLRP
Sbjct: 543 FLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKPVELWTGKQLFNVLLRP 602
Query: 2697 HTQMRVFLNLTVAEKNYMK--PKETMCLNDGFVYFRNSELISGQLGKATLGNGNKDGLYS 2524
H +RV+LNLTV EK Y K KETMC +DGFVYFRNSELISGQLGKATLGNGNKDGL+S
Sbjct: 603 HANVRVYLNLTVMEKTYNKRRGKETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLFS 662
Query: 2523 VLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPGKLITEKEKKIRSGYEECD 2344
VLLRDY +HAAA CMNRLAKLSARWIGNHGFSIGIDDVQP G L +K K+I GYE C
Sbjct: 663 VLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYENCH 722
Query: 2343 NFIDNFNKGQLELQPGHDAALTLEAKITQVLNNIRGETAKVCMDNLQWRNSPLIMSQCGS 2164
I +NKG+L+LQPG +AA TLEA+IT VLN IR TA VCM+ L WRNSPLIMSQCGS
Sbjct: 723 ELIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQCGS 782
Query: 2163 KGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPKKSKIPLAKGFVANSFYSGLTAT 1984
KGSPINISQM+ACVGQQSVGGRRAP+GFIDR+LPHFP+KSK P AKGFVA+SFY+GLTAT
Sbjct: 783 KGSPINISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYTGLTAT 842
Query: 1983 EFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDYTVRNASASIIQFFYGDD 1804
EFFFHTM GREGLVDTAVKTADTGYMSRRLMKALEDLSI YD TVRNA+ SI+QF YGDD
Sbjct: 843 EFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDETVRNANGSIVQFLYGDD 902
Query: 1803 CMDPSQMEEKSGQPLNFDRLLMKVKATCPADDQISLSPLEICERTDERLSEHDMTPEGGC 1624
MDP++ME K G PLNF+RL +KVKATCPA + SLS L+I E T +RL EH+ + E GC
Sbjct: 903 GMDPARMEGKDGFPLNFNRLFLKVKATCPAGENASLSALQI-EETVKRLKEHNTSAE-GC 960
Query: 1623 SEAFRDLLSKFLKEKCVANLRNTIRNLEWNGDQHGGEDRRFLEKFCPNISGITSRQLEVF 1444
S+AF+ LS FL E+C +NT L +G+ G E+ EKF NISGITS+QL+VF
Sbjct: 961 SDAFKTNLSGFL-EECKEKFKNTREALGLHGEHVGEENLDIQEKFAKNISGITSKQLQVF 1019
Query: 1443 LRVCISRYHAKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEII 1264
L CISRY K+ GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEII
Sbjct: 1020 LDTCISRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEII 1079
Query: 1263 DAKKNISTPIITAKLEREYNPKEARIAKARIEKTLLSQVAKSIKIVMSARLASIVITLDL 1084
+ K ISTPIITA LE N K AR+ K RIE+T L QVAKSIKIV+++RLA I + LD+
Sbjct: 1080 NGAKRISTPIITAALECNNNVKTARMVKGRIERTTLGQVAKSIKIVLTSRLALIAVALDM 1139
Query: 1083 EMIQALRLHVDAYRVKQSILQTKRLKLKEQHVKVLNTRKLEVVPQADKSKLHFELHTIKN 904
E IQA +L +D+ V++SIL+ +R+KLK+QH+KVL+ KLEV PQ D+S +HFELH +KN
Sbjct: 1140 EGIQASQLSIDSNIVRESILRNRRIKLKQQHIKVLDAGKLEVHPQGDRSTIHFELHALKN 1199
Query: 903 KLPMVVVSGINTVERVIINKEDKEKKMPKYNLFVEGMGLLEVMGTEGVEGCETKSNHIME 724
LP VVV GI TVER +INK++K KYNL VEG GL VMGTEGV G ET SNHI+E
Sbjct: 1200 LLPTVVVKGIETVERAVINKDNK----VKYNLLVEGTGLQTVMGTEGVIGRETTSNHIIE 1255
Query: 723 ILRTLGIEAARSSIIDEIRTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITRTGVQKMKD 544
+ +TLGIEAAR II+EI+ TM+SHGM+IDIRHMMLLADLMT +GEVLGITR G+QKM
Sbjct: 1256 VQQTLGIEAARKCIINEIQYTMASHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDK 1315
Query: 543 SVLMLASFEKTADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVKQRTLQQEVKL 364
SVLMLASFEKTADHLF+A+V+GR+DKIEGVSECIIMGIPMQ+GTG+LKV+QR LQQ +L
Sbjct: 1316 SVLMLASFEKTADHLFNASVSGRDDKIEGVSECIIMGIPMQLGTGILKVRQR-LQQVPEL 1374
Query: 363 NYALDPIIS 337
+Y LDPIIS
Sbjct: 1375 SYGLDPIIS 1383
>gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]
Length = 1395
Score = 1855 bits (4804), Expect = 0.0
Identities = 957/1404 (68%), Positives = 1103/1404 (78%), Gaps = 18/1404 (1%)
Frame = -3
Query: 4494 QFTKQPYIEDVGPRRIESIRFSTFGESEILKGGDVEVYRGVYYDPSKKPIEHGLLDPHMG 4315
+FTK+PYIEDVGPR+I+SI+FS +SEI K +V+VY+ +YYDP +PIE GLLDP MG
Sbjct: 4 KFTKRPYIEDVGPRKIKSIQFSMLSDSEIAKAAEVQVYQALYYDPKSRPIEGGLLDPRMG 63
Query: 4314 PTLKGGLCETCHGTFSQCPGHYGYLTLALPVYHAGYLTNILDILKCICKQCSSVLLAEKD 4135
P K G C TCHG F+ CPGHYGYL+LALPVY+ GYL+ ILDILKCICK CS ++L EK
Sbjct: 64 PANKSGKCATCHGNFADCPGHYGYLSLALPVYNVGYLSTILDILKCICKSCSRIILDEKL 123
Query: 4134 RLAFLQKMRNPKMEPLGKTQLQKKVVEKCNRLVASGRKATVCPKCGYINGMVKKNTKMLG 3955
+L++MR+PK++ L K + K +V+KC+ + +S KA C +CGY+NG VKK MLG
Sbjct: 124 CKDYLKRMRSPKIDALKKGDIMKSIVKKCSAMASS--KAVKCWRCGYVNGTVKKAVAMLG 181
Query: 3954 IIHERSRVNDSSSNEYRSALSHIQEFNASSCSVPDEINPKVVYSLLKNVKDEDCELLYLS 3775
IIH+RS++ND+S E+RSA+SH +E AS +NP V SL K + D DCELLYLS
Sbjct: 182 IIHDRSKINDNSLEEFRSAISHTKESKASFNVATYVLNPVKVLSLFKRMTDLDCELLYLS 241
Query: 3774 DRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLHQEISDTSLPT 3595
DRPEKL+ +DG +QSNENDITERLKRIIQANASL QE+ +T+
Sbjct: 242 DRPEKLIITNIAVPPIPIRPSVIMDG-SQSNENDITERLKRIIQANASLRQELVETNAAF 300
Query: 3594 KSLNAWIDLQVEVAQYINSDVRGIPFSAPTTKPLSGFVQRLKGKQGRFRGNLSGKRVEYT 3415
K L W LQVEVAQYINSDVRG+PFS +KPLSGFVQR+KGK GRFRGNLSGKRVEYT
Sbjct: 301 KCLGGWEMLQVEVAQYINSDVRGVPFSMQVSKPLSGFVQRIKGKHGRFRGNLSGKRVEYT 360
Query: 3414 GRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKFIKQT 3235
GRTVISPDPNLKITEVA+PI MARILTYPERVS+HNIEKLRQCVRNGP+KYPGA+ ++
Sbjct: 361 GRTVISPDPNLKITEVAIPIHMARILTYPERVSNHNIEKLRQCVRNGPSKYPGARMVRYP 420
Query: 3234 GADPISLISAARKRYADELKFGDIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRT 3055
LI RKR ADELKFG +VDRHLEDGD+VLFNRQPSLHRMSIMCHRARIMPWRT
Sbjct: 421 DGSARLLIGDYRKRLADELKFGCVVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRT 480
Query: 3054 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF 2875
LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF
Sbjct: 481 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF 540
Query: 2874 LTSSFLITRKDTFYDRASFSLICSYMGNGMDQIDLPTPALVKPVELWTGKQLFNILLRPH 2695
LTSSFLITRKD FYDRA+FSLICSYMG+GMD IDLPTPAL+KP+ELWTGKQLF++LLRPH
Sbjct: 541 LTSSFLITRKDIFYDRAAFSLICSYMGDGMDLIDLPTPALLKPIELWTGKQLFSVLLRPH 600
Query: 2694 TQMRVFLNLTVAEKNYMK-----------PKETMCLNDGFVYFRNSELISGQLGKATLGN 2548
+RV+LNL V E+NY K ETMC +DGFVY RNSELI GQLGKATLGN
Sbjct: 601 ASVRVYLNLIVKERNYSKKIIKRIGNKEIEVETMCPDDGFVYIRNSELICGQLGKATLGN 660
Query: 2547 GNKDGLYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPGKLITEKEKKI 2368
GNKDGLYSVLLRDY +HAAA CMNRLAKLSARWIGNHGFSIGIDDVQP +L EK I
Sbjct: 661 GNKDGLYSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGKRLNDEKALTI 720
Query: 2367 RSGYEECDNFIDNFNKGQLELQPGHDAALTLEAKITQVLNNIRGETAKVCMDNLQWRNSP 2188
Y++CD I FN+G+L+ +PG+DAA TLEA +T +LNNIR +T KVCM L WRNSP
Sbjct: 721 SGDYKKCDEEIQTFNEGKLKPKPGYDAAQTLEANVTAILNNIRDKTGKVCMKELHWRNSP 780
Query: 2187 LIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPKKSKIPLAKGFVANS 2008
LIMSQCGSKGS INISQM+ACVGQQSVGGRRAPNGFIDRSLPHF + SK P AKGFVANS
Sbjct: 781 LIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRSLPHFHRGSKTPAAKGFVANS 840
Query: 2007 FYSGLTATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDYTVRNASASI 1828
FYSGLTATEFFFHTMAGREGLVDTAVKTA+TGYMSRRL+KALEDLSIHYD TVRNAS I
Sbjct: 841 FYSGLTATEFFFHTMAGREGLVDTAVKTAETGYMSRRLIKALEDLSIHYDNTVRNASGCI 900
Query: 1827 IQFFYGDDCMDPSQMEEKSGQPLNFDRLLMKVKATCPADDQISLSPLEICERTDERLSEH 1648
+QF YGDD MDP+ ME KSG PLNFDRLLMKVKATCP +Q L I + +E+L++H
Sbjct: 901 VQFIYGDDGMDPACMEGKSGFPLNFDRLLMKVKATCPPIEQKCLHVGSIMQMLEEQLAKH 960
Query: 1647 DMTPEGGCSEAFRDLLSKFLKEKCVANLRNTIRNLEWNGDQHGGEDRRFLEKFCPNISGI 1468
D P G CSEAF+ L FLK + N + + L N Q LEK ISGI
Sbjct: 961 D--PAGVCSEAFKKSLKGFLKSQ--TNELDRVMKLVNNCAQKS----EILEKVGHKISGI 1012
Query: 1467 TSRQLEVFLRVCISRYHAKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLG 1288
+ RQLEVF+ CISRY +K GEPGTQMTLKTFHFAGVASMN+T G
Sbjct: 1013 SDRQLEVFVSTCISRYRSKVIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQG 1072
Query: 1287 VPRIKEIIDAKKNISTPIITAKLEREYNPKEARIAKARIEKTLLSQVAKSIKIVMSARLA 1108
VPRIKEII+A K ISTP+ITA+LE + NP A+I K RIEKT+L QVAKSIKIV+++R A
Sbjct: 1073 VPRIKEIINAAKRISTPVITAELEFDDNPNIAQIVKGRIEKTVLGQVAKSIKIVITSRSA 1132
Query: 1107 SIVITLDLEMIQALRLHVDAYRVKQSILQTKRLKLKEQHVKVLNTRKLEVVPQADKSKLH 928
S+VITLD+E+I L++DA VK+SILQT ++KLKEQHVKVL+ RKLEVVP AD+S++H
Sbjct: 1133 SVVITLDMEIILDAELYIDANIVKESILQTPKIKLKEQHVKVLDGRKLEVVPPADRSQIH 1192
Query: 927 FELHTIKNKLPMVVVSGINTVERVIINKEDKEKKMPK-------YNLFVEGMGLLEVMGT 769
FELH++KN LP+VVV GI TVER ++ ++KEKK K + L VEG GL VMG
Sbjct: 1193 FELHSLKNLLPLVVVKGIKTVERTVVYDKNKEKKNQKEEETTKHFQLLVEGTGLQAVMGI 1252
Query: 768 EGVEGCETKSNHIMEILRTLGIEAARSSIIDEIRTTMSSHGMTIDIRHMMLLADLMTSKG 589
EG++G T SNH+ME+ + LGIEAAR IIDEI TM HGMTID RHMMLLAD+MT +G
Sbjct: 1253 EGIDGRRTWSNHVMEMEQILGIEAARKCIIDEIAQTMEHHGMTIDRRHMMLLADVMTFRG 1312
Query: 588 EVLGITRTGVQKMKDSVLMLASFEKTADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTG 409
EVLGITR G+QKM S+LMLASFE+TADHLF+AAVNGR+DKIEGV+ECIIMGIPMQ+GTG
Sbjct: 1313 EVLGITRFGIQKMDKSILMLASFERTADHLFNAAVNGRDDKIEGVTECIIMGIPMQIGTG 1372
Query: 408 MLKVKQRTLQQEVKLNYALDPIIS 337
+LKV QR + L Y DP++S
Sbjct: 1373 ILKVIQR-VDPPPMLRYGPDPVLS 1395
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
PREDICTED: DNA-directed RNA polymerase III subunit
rpc1-like isoform X2 [Citrus sinensis]
Length = 1404
Score = 1833 bits (4749), Expect = 0.0
Identities = 948/1413 (67%), Positives = 1099/1413 (77%), Gaps = 18/1413 (1%)
Frame = -3
Query: 4521 RMRRAQATIQFTKQPYIEDVGPRRIESIRFSTFGESEILKGGDVEVYRGVYYDPSKKPIE 4342
++++ +I FTKQPYIEDVGPR+IESI+FS +SEI+K +V+VY+G YY ++ PIE
Sbjct: 4 QLQQKSQSIAFTKQPYIEDVGPRKIESIQFSMMSDSEIMKAAEVQVYKGQYYSSNRVPIE 63
Query: 4341 HGLLDPHMGPTLKGGLCETCHGTFSQCPGHYGYLTLALPVYHAGYLTNILDILKCICKQC 4162
GLLDP MGP K C TCHG FS CPGHYGYLTLALPVY+ GYL+ ILDILKCICK C
Sbjct: 64 GGLLDPRMGPANKSCTCATCHGGFSNCPGHYGYLTLALPVYNVGYLSTILDILKCICKYC 123
Query: 4161 SSVLLAEKDRLAFLQKMRNPKMEPLGKTQLQKKVVEKCNRLVASGRKATVCPKCGYINGM 3982
S +LL EK +L+KMRNPKME L KT L K +V+KC+ + + KA CP+CGYINGM
Sbjct: 124 SRLLLEEKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTMAS---KAVKCPRCGYINGM 180
Query: 3981 VKKNTKMLGIIHERSRVNDSSSNEYRSALSHIQEFNASSCSVPDEINPKVVYSLLKNVKD 3802
VKK +LGIIH+RS+V +S E+ SA++H +E A+ +NP V L K + D
Sbjct: 181 VKKAVAVLGIIHDRSKVTESLQ-EFASAITHTKESKAAVNVATYILNPVNVLFLFKRMTD 239
Query: 3801 EDCELLYLSDRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLHQ 3622
DCE+LYLS+RPEKL+ +DG +QSNENDITERLKRIIQ NASL Q
Sbjct: 240 TDCEVLYLSERPEKLIITNIAVPPIAIRPSVIMDG-SQSNENDITERLKRIIQTNASLQQ 298
Query: 3621 EISDTSLPTKSLNAWIDLQVEVAQYINSDVRGIPFSAPTTKPLSGFVQRLKGKQGRFRGN 3442
E+ + + KSL W LQVEVAQYINSDVRG+PFS +PLSGFVQRLKGKQGRFRGN
Sbjct: 299 ELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQVARPLSGFVQRLKGKQGRFRGN 358
Query: 3441 LSGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQCVRNGPNKY 3262
LSGKRVEYTGRTVISPDPNLKITEVA+PI MARILTYPERVS HNIEKLRQC++NGP+KY
Sbjct: 359 LSGKRVEYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSDHNIEKLRQCIQNGPDKY 418
Query: 3261 PGAKFIKQTGADPISLISAARKRYADELKFGDIVDRHLEDGDVVLFNRQPSLHRMSIMCH 3082
PGA+ I+ L R + A ELK G IVDRHLEDGDVVLFNRQPSLHRMSIMCH
Sbjct: 419 PGARMIRYPDGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVVLFNRQPSLHRMSIMCH 478
Query: 3081 RARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGE 2902
RARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQNNLCTPKNGE
Sbjct: 479 RARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGE 538
Query: 2901 ILVASTQDFLTSSFLITRKDTFYDRASFSLICSYMGNGMDQIDLPTPALVKPVELWTGKQ 2722
ILVASTQDFLTSSFLITRKDTFYDRA+FSL+C YMG+GMD++DLPTPA++KPVELWTGKQ
Sbjct: 539 ILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVDLPTPAILKPVELWTGKQ 598
Query: 2721 LFNILLRPHTQMRVFLNLTVAEKNYMKPK-----------ETMCLNDGFVYFRNSELISG 2575
LF++L+RPH MRV++NLTV EK Y ETMC NDGFVYFRNSELISG
Sbjct: 599 LFSVLIRPHANMRVYVNLTVKEKTYSNKLIRTEGDEEIRIETMCPNDGFVYFRNSELISG 658
Query: 2574 QLGKATLGNGNKDGLYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPGK 2395
QLGKATLGNGNKDGLYSVLLRDYG+HA + CMNRLAKLSARWIGNHGFSIGIDDVQP +
Sbjct: 659 QLGKATLGNGNKDGLYSVLLRDYGAHATSGCMNRLAKLSARWIGNHGFSIGIDDVQPKKE 718
Query: 2394 LITEKEKKIRSGYEECDNFIDNFNKGQLELQPGHDAALTLEAKITQVLNNIRGETAKVCM 2215
L +K K I YE C+ I +N+G+L+L+PG DAA TLEA IT +LN IR + K CM
Sbjct: 719 LSDKKGKLISENYEVCNVKIKEYNEGKLQLKPGCDAAQTLEAVITDILNRIREDAGKACM 778
Query: 2214 DNLQWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPKKSKIP 2035
+L WRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFP+K+K P
Sbjct: 779 GSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKAKEP 838
Query: 2034 LAKGFVANSFYSGLTATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDY 1855
AKGFVANSFYSGL+ATEFFFHTM GREGLVDTAVKTADTGYMSRRL+KALEDLSI YD
Sbjct: 839 AAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDN 898
Query: 1854 TVRNASASIIQFFYGDDCMDPSQMEEKSGQPLNFDRLLMKVKATCPADDQISLSPLEICE 1675
+VRNA I+QF YGDD MDP+ ME KSG+PLNFDRLLMKVKATCP Q LSP ++ E
Sbjct: 899 SVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKVKATCPPAGQRYLSPQQVSE 958
Query: 1674 RTDERLSEHDMTPEGGCSEAFRDLLSKFLKEKCVANLRNTIRNLEWNGDQHGGEDRRFLE 1495
+++L+ + + CSEAF + L KF E L I+ +E D + + LE
Sbjct: 959 IVEKQLAAYG---KESCSEAFLNSLRKFF-EGQQDKLDKKIKFVE---DIGWDDKSQILE 1011
Query: 1494 KFCPNISGITSRQLEVFLRVCISRYHAKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAG 1315
+ SGIT +QLEVF++ C SRYH K+ GEPGTQMTLKTFHFAG
Sbjct: 1012 EVTHKTSGITEKQLEVFIQTCFSRYHVKRVEAGTAIGAIGAQSIGEPGTQMTLKTFHFAG 1071
Query: 1314 VASMNVTLGVPRIKEIIDAKKNISTPIITAKLEREYNPKEARIAKARIEKTLLSQVAKSI 1135
VASMN+T GVPRIKEII+ K ISTPIITA+LE N AR+ K RIEKTLL QVAKSI
Sbjct: 1072 VASMNITQGVPRIKEIINGAKRISTPIITAELECNDNENAARVVKGRIEKTLLGQVAKSI 1131
Query: 1134 KIVMSARLASIVITLDLEMIQALRLHVDAYRVKQSILQTKRLKLKEQHVKVLNTRKLEVV 955
KIVM++RLASIVI LD+E IQ L ++A VK+SI+QT ++KLK+QH+KVL+ RKLE+
Sbjct: 1132 KIVMTSRLASIVIALDMETIQDAHLCINADIVKESIVQTPKIKLKQQHIKVLDFRKLEIF 1191
Query: 954 PQADKSKLHFELHTIKNKLPMVVVSGINTVERVIINKEDKEKK-------MPKYNLFVEG 796
P DKSK+HFEL+++KN LPMV+V GI TVERV+I +++KEK+ KY L VEG
Sbjct: 1192 PPVDKSKIHFELYSLKNVLPMVIVKGIKTVERVVIAEKEKEKRKVKENGEKKKYRLLVEG 1251
Query: 795 MGLLEVMGTEGVEGCETKSNHIMEILRTLGIEAARSSIIDEIRTTMSSHGMTIDIRHMML 616
GL VMG EG++GC+TKSNHI E+ +TLGIEAAR IIDEI TM +HGM+ID RHMML
Sbjct: 1252 TGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDKRHMML 1311
Query: 615 LADLMTSKGEVLGITRTGVQKMKDSVLMLASFEKTADHLFSAAVNGREDKIEGVSECIIM 436
LADLMT +GEVLGITR G+QKM SVLMLASFEKTADHLF+A+VNGR+D+IEGVSECIIM
Sbjct: 1312 LADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIM 1371
Query: 435 GIPMQMGTGMLKVKQRTLQQEVKLNYALDPIIS 337
GIPM +GTG+LK++QR + A DPI+S
Sbjct: 1372 GIPMPLGTGILKIRQRDAVPPMLKYGAPDPIMS 1404
>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
sativus]
Length = 1400
Score = 1813 bits (4697), Expect = 0.0
Identities = 937/1399 (66%), Positives = 1087/1399 (77%), Gaps = 22/1399 (1%)
Frame = -3
Query: 4518 MRRAQAT-IQFTKQPYIEDVGPRRIESIRFSTFGESEILKGGDVEVYRGVYYDPSKKPIE 4342
M RAQ + FTKQPYIEDVGPR+I+S++F+TF +EI K +V+VY+G+YYD ++KPI+
Sbjct: 1 MNRAQVEGLVFTKQPYIEDVGPRKIKSMQFTTFSGAEISKLAEVQVYKGLYYDTTRKPID 60
Query: 4341 HGLLDPHMGPTLKGGLCETCHGTFSQCPGHYGYLTLALPVYHAGYLTNILDILKCICKQC 4162
GLLDP MGP KG C TCH F CPGHYGY+ LALPV++ GY T IL+ILKCICK C
Sbjct: 61 GGLLDPRMGPANKGCKCATCHANFGDCPGHYGYVNLALPVFNVGYFTTILEILKCICKSC 120
Query: 4161 SSVLLAEKDRLAFLQKMRNPKMEPLGKTQLQKKVVEKCNRLVASGRKATVCPKCGYINGM 3982
S +LL EK FL+KMRNPK+E L K L KK+++KC+ L +G K+T C +CGY+NG
Sbjct: 121 SRILLEEKLFKDFLRKMRNPKLEALRKVDLVKKIIKKCSTLT-TGNKSTRCSRCGYLNGS 179
Query: 3981 VKKNTKMLGIIHERSRVNDSS--SNEYRSALSHIQEFNASSCSVPDEINPKVVYSLLKNV 3808
VKK MLGI+H R+R D+ S + R+ +N S+ D +NP V L + +
Sbjct: 180 VKKAVSMLGILHYRARSKDAGVVSEDLRAP------YNVSN----DILNPFRVLCLFQRM 229
Query: 3807 KDEDCELLYLSDRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASL 3628
DEDCELL+LS+RPEKL+ +DG +QSNENDITERLKRIIQ NAS+
Sbjct: 230 SDEDCELLFLSNRPEKLIITNVLVPPIAIRPSVIMDG-SQSNENDITERLKRIIQQNASV 288
Query: 3627 HQEISDTSLPTKSLNAWIDLQVEVAQYINSDVRGIPFSAPTTKPLSGFVQRLKGKQGRFR 3448
QE+S ++ K L +W LQ EVAQ INSDVRGIPFS +KPL+GFVQRLKGKQGRFR
Sbjct: 289 SQELSTSNSQAKCLESWDMLQSEVAQLINSDVRGIPFSMQVSKPLAGFVQRLKGKQGRFR 348
Query: 3447 GNLSGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQCVRNGPN 3268
GNL GKRVE+TGRTVISPDPNLKITEVAVPI MARILTYPERV+ HNIEKLRQCV NGP+
Sbjct: 349 GNLCGKRVEFTGRTVISPDPNLKITEVAVPIHMARILTYPERVTRHNIEKLRQCVSNGPD 408
Query: 3267 KYPGAKFIKQTGADPISLISAARKRYADELKFGDIVDRHLEDGDVVLFNRQPSLHRMSIM 3088
KYPGA+ ++ SL+ + RKR ADELK+G+IV+RHLEDGDVVLFNRQPSLHRMSIM
Sbjct: 409 KYPGARMLRHLDGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIM 468
Query: 3087 CHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKN 2908
CHR R+MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA++LMGVQNNLCTPKN
Sbjct: 469 CHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKN 528
Query: 2907 GEILVASTQDFLTSSFLITRKDTFYDRASFSLICSYMGNGMDQIDLPTPALVKPVELWTG 2728
GEILVASTQDFLTSSFLITRKDTFYDRA+FSL+CSYMG+GMD +DLPTPALVKP+ELWTG
Sbjct: 529 GEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALVKPIELWTG 588
Query: 2727 KQLFNILLRPHTQMRVFLNLTVAEKNYMKPK------ETMCLNDGFVYFRNSELISGQLG 2566
KQLF++L+RPH M+V+LNLTV EK+Y K K ETMC NDGFVYFRNSELISGQ+G
Sbjct: 589 KQLFSVLVRPHASMKVYLNLTVKEKSYSKVKGNEKERETMCPNDGFVYFRNSELISGQVG 648
Query: 2565 KATLGNGNKDGLYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPGKLIT 2386
KATLGNGNKDGLYSVLLRDY +HAAA CMNRLAKLSARWIGNHGFSIGIDDVQP +L+
Sbjct: 649 KATLGNGNKDGLYSVLLRDYKAHAAAVCMNRLAKLSARWIGNHGFSIGIDDVQPGDQLVK 708
Query: 2385 EKEKKIRSGYEECDNFIDNFNKGQLELQPGHDAALTLEAKITQVLNNIRGETAKVCMDNL 2206
+K+ I GY +CD I+ FN G L + G DAA +LE+KITQ+LN IR TA VCM NL
Sbjct: 709 KKQTTILEGYRDCDKQINLFNTGNLPPEAGCDAAQSLESKITQILNGIREATANVCMQNL 768
Query: 2205 QWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPKKSKIPLAK 2026
WRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAP+GFIDRSLPHF +K+K P AK
Sbjct: 769 HWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRSLPHFRRKAKTPAAK 828
Query: 2025 GFVANSFYSGLTATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDYTVR 1846
GFVANSFYSGLTATEFFFHTM GREGLVDTAVKTADTGYMSRRL+KALEDLSIHYD +VR
Sbjct: 829 GFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSSVR 888
Query: 1845 NASASIIQFFYGDDCMDPSQMEEKSGQPLNFDRLLMKVKATCPADDQISLSPLEICERTD 1666
NA I+QF YGDD MDP+QME KSG PLNF+RL +K KATCP+D LSP E E +
Sbjct: 889 NAGGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAKATCPSDGNKILSPSEFSETVE 948
Query: 1665 ERLSEHDMTPEGGCSEAFRDLLSKFLKEKCVANLRNTIRNLEWNGDQHGGEDRRFL---- 1498
+RLS+ D +PE GCS AF L FL + A ++ L D D+ +
Sbjct: 949 DRLSKDDASPECGCSPAFVGSLKIFLNKYVEAQKKSWGTLL---ADNESAVDKSIISSSD 1005
Query: 1497 -------EKFCPNISGITSRQLEVFLRVCISRYHAKKXXXXXXXXXXXXXXXGEPGTQMT 1339
K NI+G+T RQL+VFL C+SRYH KK GEPGTQMT
Sbjct: 1006 NDNIVIRNKVVQNIAGVTHRQLQVFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMT 1065
Query: 1338 LKTFHFAGVASMNVTLGVPRIKEIIDAKKNISTPIITAKLEREYNPKEARIAKARIEKTL 1159
LKTFHFAGVASMNVTLGVPRIKEII+ K ISTPI+TA L + N AR+ KARIEKT
Sbjct: 1066 LKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIVTAALTHDDNVNIARMVKARIEKTN 1125
Query: 1158 LSQVAKSIKIVMSARLASIVITLDLEMIQALRLHVDAYRVKQSILQTKRLKLKEQHVKVL 979
L Q+AK I+IVMS+R A I I LD+E I+ L+VDA VKQ+IL T +LKLK +H+ VL
Sbjct: 1126 LGQIAKCIQIVMSSRSALIEIKLDMEKIRDAELYVDANVVKQAILVTPKLKLKHEHINVL 1185
Query: 978 NTRKLEVVPQ-ADKSKLHFELHTIKNKLPMVVVSGINTVERVIINKE-DKEKKMPKYNLF 805
+ RKL V+PQ AD++KLHF LH +KN LP VVV GI TV R +I +E DK + K++L
Sbjct: 1186 DDRKLRVLPQDADRNKLHFNLHFLKNMLPGVVVKGIKTVGRAVIKEEKDKARNAKKFSLL 1245
Query: 804 VEGMGLLEVMGTEGVEGCETKSNHIMEILRTLGIEAARSSIIDEIRTTMSSHGMTIDIRH 625
VEG GL VMGTEGV+GC TKSNHI+E+ + LGIEAAR II+EI+ TM SHGM+IDIRH
Sbjct: 1246 VEGTGLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRH 1305
Query: 624 MMLLADLMTSKGEVLGITRTGVQKMKDSVLMLASFEKTADHLFSAAVNGREDKIEGVSEC 445
MMLL DLMT +GEVLGITR G+QKM SVLMLASFEKTADHLF+A+VNGR+DKIEGVSEC
Sbjct: 1306 MMLLGDLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSEC 1365
Query: 444 IIMGIPMQMGTGMLKVKQR 388
+IMGIPM +GTGMLKV+QR
Sbjct: 1366 VIMGIPMPLGTGMLKVRQR 1384
>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
gi|557526635|gb|ESR37941.1| hypothetical protein
CICLE_v10027681mg [Citrus clementina]
Length = 1397
Score = 1773 bits (4592), Expect = 0.0
Identities = 930/1428 (65%), Positives = 1079/1428 (75%), Gaps = 33/1428 (2%)
Frame = -3
Query: 4521 RMRRAQATIQFTKQPYIEDVGPRRIESIRFSTFGESEILKGGDVEVYRGVYYDPSKKPIE 4342
++++ +I FTKQPYIEDVGPR+IESI+FS +SEI+K +V+VY+G YY ++ PIE
Sbjct: 4 QLQQKSQSIAFTKQPYIEDVGPRKIESIQFSMMSDSEIMKAAEVQVYKGQYYSSNRVPIE 63
Query: 4341 HGLLDPHM---------------GPTLKGGLCETCHGTFSQCPGHYGYLTLALPVYHAGY 4207
GLLDP M GP K C TCHG FS CPGHYGYLTLALPVY+ GY
Sbjct: 64 GGLLDPRMEKIIFLQRLFFHGFQGPANKSCTCATCHGGFSNCPGHYGYLTLALPVYNVGY 123
Query: 4206 LTNILDILKCICKQCSSVLLAEKDRLAFLQKMRNPKMEPLGKTQLQKKVVEKCNRLVASG 4027
L+ ILDILKCICK CS +LL EK +L+KMRNPKME L KT L K +V+KC+ + +
Sbjct: 124 LSTILDILKCICKYCSRLLLEEKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTMAS-- 181
Query: 4026 RKATVCPKCGYINGMVKKNTKMLGIIHERSRVNDSSSNEYRSALSHIQEFNASSCSVPDE 3847
KA CP+CGYINGMVKK +LGIIH+RS+V +S E+ SA++H +E A+
Sbjct: 182 -KAVKCPRCGYINGMVKKAVAVLGIIHDRSKVTESLQ-EFASAITHTKESKAAVNVATYI 239
Query: 3846 INPKVVYSLLKNVKDEDCELLYLSDRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDIT 3667
+NP V L K + D DCE+LYLS+RPEKL+ +DG +QSNENDIT
Sbjct: 240 LNPVNVLFLFKRMTDTDCEVLYLSERPEKLIITNIAVPPIAIRPSVIMDG-SQSNENDIT 298
Query: 3666 ERLKRIIQANASLHQEISDTSLPTKSLNAWIDLQVEVAQYINSDVRGIPFSAPTTKPLSG 3487
ERLKRIIQ NASL QE+ + + KSL W LQVEVAQYINSDVRG+PFS +PLSG
Sbjct: 299 ERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQVARPLSG 358
Query: 3486 FVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHN 3307
FVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVA+PI MARILTYPERVS HN
Sbjct: 359 FVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSDHN 418
Query: 3306 IEKLRQCVRNGPNKYPGAKFIKQTGADPISLISAARKRYADELKFGDIVDRHLEDGDVVL 3127
IEKLRQC++NGP+KYPGA+ I+ L R + A ELK G IVDRHLEDGDVVL
Sbjct: 419 IEKLRQCIQNGPDKYPGARMIRYPDGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVVL 478
Query: 3126 FNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALM 2947
FNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+
Sbjct: 479 FNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALL 538
Query: 2946 LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRASFSLICSYMGNGMDQIDLP 2767
LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRA+FSL+C YMG+GMD++DLP
Sbjct: 539 LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVDLP 598
Query: 2766 TPALVKPVELWTGKQLFNILLRPHTQMRVFLNLTVAEKNYMKPK-----------ETMCL 2620
TPA++KPVELWTGKQLF++L+RPH MRV++NLTV EK Y ETMC
Sbjct: 599 TPAILKPVELWTGKQLFSVLIRPHANMRVYVNLTVKEKTYSNKLIRTEGDEEIRIETMCP 658
Query: 2619 NDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYGSHAAATCMNRLAKLSARWIGN 2440
NDGFVYFRNSELISGQLGKATLG CMNRLAKLSARWIGN
Sbjct: 659 NDGFVYFRNSELISGQLGKATLG----------------------CMNRLAKLSARWIGN 696
Query: 2439 HGFSIGIDDVQPPGKLITEKEKKIRSGYEECDNFIDNFNKGQLELQPGHDAALTLEAKIT 2260
HGFSIGIDDVQP +L +K K I YE C+ I +N+G+L+L+PG DAA TLEA IT
Sbjct: 697 HGFSIGIDDVQPKKELSDKKGKLISENYEVCNVKIKEYNEGKLQLKPGCDAAQTLEAVIT 756
Query: 2259 QVLNNIRGETAKVCMDNLQWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGF 2080
+LN IR + K CM +L WRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGF
Sbjct: 757 DILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGF 816
Query: 2079 IDRSLPHFPKKSKIPLAKGFVANSFYSGLTATEFFFHTMAGREGLVDTAVKTADTGYMSR 1900
IDRSLPHFP+K+K P AKGFVANSFYSGL+ATEFFFHTM GREGLVDTAVKTADTGYMSR
Sbjct: 817 IDRSLPHFPRKAKEPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSR 876
Query: 1899 RLMKALEDLSIHYDYTVRNASASIIQFFYGDDCMDPSQMEEKSGQPLNFDRLLMKVKATC 1720
RL+KALEDLSI YD +VRNA I+QF YGDD MDP+ ME KSG+PLNFDRLLMKVKATC
Sbjct: 877 RLIKALEDLSIQYDNSVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKVKATC 936
Query: 1719 PADDQISLSPLEICERTDERLSEHDMTPEGGCSEAFRDLLSKFLKEKCVANLRNTIRNLE 1540
P Q LSP ++ E +++L+ + + CSEAF + L KF E L I+ +E
Sbjct: 937 PPAGQRYLSPQQVSEIVEKQLAAYG---KESCSEAFLNSLRKFF-EGQQDKLDKKIKFVE 992
Query: 1539 WNGDQHGGEDRRFLEKFCPNISGITSRQLEVFLRVCISRYHAKKXXXXXXXXXXXXXXXG 1360
D + + LE+ SGIT +QLEVF++ C SRYH K+ G
Sbjct: 993 ---DIGWDDKSQILEEVTHKTSGITEKQLEVFIQTCFSRYHVKRVEAGTAIGAIGAQSIG 1049
Query: 1359 EPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIDAKKNISTPIITAKLEREYNPKEARIAK 1180
EPGTQMTLKTFHFAGVASMN+T GVPRIKEII+ K ISTPIITA+LE N AR+ K
Sbjct: 1050 EPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELECNDNENAARVVK 1109
Query: 1179 ARIEKTLLSQVAKSIKIVMSARLASIVITLDLEMIQALRLHVDAYRVKQSILQTKRLKLK 1000
RIEKTLL QVAKSIKIVM++RLASIVI LD+E IQ L ++A VK+SI+QT ++KLK
Sbjct: 1110 GRIEKTLLGQVAKSIKIVMTSRLASIVIALDMETIQDAHLCINADIVKESIVQTPKIKLK 1169
Query: 999 EQHVKVLNTRKLEVVPQADKSKLHFELHTIKNKLPMVVVSGINTVERVIINKEDKEKK-- 826
+QH+KVL+ RKLE+ P DKSK+HFEL+++KN LPMV+V GI TVERV+I +++KEK+
Sbjct: 1170 QQHIKVLDFRKLEIFPPVDKSKIHFELYSLKNVLPMVIVKGIKTVERVVIAEKEKEKRKV 1229
Query: 825 -----MPKYNLFVEGMGLLEVMGTEGVEGCETKSNHIMEILRTLGIEAARSSIIDEIRTT 661
KY L VEG GL VMG EG++GC+TKSNHI E+ +TLGIEAAR IIDEI T
Sbjct: 1230 KENGEKKKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEINET 1289
Query: 660 MSSHGMTIDIRHMMLLADLMTSKGEVLGITRTGVQKMKDSVLMLASFEKTADHLFSAAVN 481
M +HGM+ID RHMMLLADLMT +GEVLGITR G+QKM SVLMLASFEKTADHLF+A+VN
Sbjct: 1290 MKAHGMSIDKRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVN 1349
Query: 480 GREDKIEGVSECIIMGIPMQMGTGMLKVKQRTLQQEVKLNYALDPIIS 337
GR+D+IEGVSECIIMGIPM +GTG+LK++QR + A DPI+S
Sbjct: 1350 GRDDRIEGVSECIIMGIPMPLGTGILKIRQRDAVPPMLKYGAPDPIMS 1397
>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X2 [Solanum tuberosum]
Length = 1243
Score = 1754 bits (4544), Expect = 0.0
Identities = 892/1247 (71%), Positives = 1013/1247 (81%), Gaps = 6/1247 (0%)
Frame = -3
Query: 4518 MRRAQATIQFTKQPYIEDVGPRRIESIRFSTFGESEILKGGDVEVYRGVYYDPSKKPIEH 4339
M+R Q ++Q TKQPYIEDVGPR+I+SI+FS F ESEILK +VEVY G+YY+ +KKPI++
Sbjct: 1 MKRIQNSLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKSAEVEVYLGLYYESTKKPIQN 60
Query: 4338 GLLDPHMGPTLKGGLCETCHGTFSQCPGHYGYLTLALPVYHAGYLTNILDILKCICKQCS 4159
GLLDP MGP K G CETCHG F +CPGHYGYL LALPVY+ GYL ++DILKCICK CS
Sbjct: 61 GLLDPRMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCS 120
Query: 4158 SVLLAEKDRLAFLQKMRNPKMEPLGKTQLQKKVVEKCNRLVASGRKATVCPKCGYINGMV 3979
S+LL +K+R L+KMRNP+ E L K++L KKVV++CN + A G+K C KCGY+NGMV
Sbjct: 121 SILLDDKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAM-AGGQKTATCSKCGYMNGMV 179
Query: 3978 KKNTKMLGIIHER-SRVNDSSSNEYRSALSHIQEFNASSCSVPDEINPKVVYSLLKNVKD 3802
KK L I HE+ +R+ D E A+S +E AS SVP E++PKVVYSL KN+ D
Sbjct: 180 KK--LQLKITHEQGNRILD----EINVAISDKRELRAS-VSVPPELDPKVVYSLFKNMSD 232
Query: 3801 EDCELLYLSDRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLHQ 3622
EDCELLYLSDRPEKL+ VDGGTQSNENDITERLKRIIQANASLHQ
Sbjct: 233 EDCELLYLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQ 292
Query: 3621 EISDTSLPTKSLNAWIDLQVEVAQYINSDVRGIPFSAPTTKPLSGFVQRLKGKQGRFRGN 3442
E+SD+S P KSLN WIDLQ+EVAQYINSDVRG+P +PLSGF QRLKGKQGRFRGN
Sbjct: 293 EMSDSS-PVKSLNLWIDLQMEVAQYINSDVRGVPLHMQAQRPLSGFTQRLKGKQGRFRGN 351
Query: 3441 LSGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQCVRNGPNKY 3262
LSGKRVEYTGRTVISPDPNLKITEVA+PILMA+ILTYPERVS HNIEKLRQCVRNGPNKY
Sbjct: 352 LSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKY 411
Query: 3261 PGAKFIKQTGADPISLISAARKRYADELKFGDIVDRHLEDGDVVLFNRQPSLHRMSIMCH 3082
PGAKFI+ ISL+ +RKR+ADELKFG IVDRHLEDGD+VLFNRQPSLHRMSIM H
Sbjct: 412 PGAKFIRHPDGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSH 471
Query: 3081 RARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGE 2902
RARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPK+GE
Sbjct: 472 RARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGE 531
Query: 2901 ILVASTQDFLTSSFLITRKDTFYDRASFSLICSYMGNGMDQIDLPTPALVKPVELWTGKQ 2722
ILVASTQDFLTSSFLITRKDTFY+RASFSLICSYMG+ MD DLP+PA +KPVELWTGKQ
Sbjct: 532 ILVASTQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQ 591
Query: 2721 LFNILLRPHTQMRVFLNLTVAEKNYMKPKETMCLNDGFVYFRNSELISGQLGKATLGNGN 2542
LF++LLRP+++MRV++NLTV EK+Y ETMC +DGFVYFRNSELISGQLGKATLGNGN
Sbjct: 592 LFHMLLRPYSKMRVYVNLTVTEKSYSGKGETMCPSDGFVYFRNSELISGQLGKATLGNGN 651
Query: 2541 KDGLYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPGKLITEKEKKIRS 2362
KDGLYSVLLRDY SHAAATCMNRLAKLSARWIGNHGFSIGIDDV P L+ +K+ +I
Sbjct: 652 KDGLYSVLLRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHR 711
Query: 2361 GYEECDNFIDNFNKGQLELQPGHDAALTLEAKITQVLNNIRGETAKVCMDNLQWRNSPLI 2182
Y++C++ I FN+G+L +QPG DAA TLEA++T LN +R + K+CM L WRNSPLI
Sbjct: 712 NYKKCEDCITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLI 771
Query: 2181 MSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPKKSKIPLAKGFVANSFY 2002
MSQCGSKGSPINISQM+ACVGQQSVGGRRAP+GFIDRSLPHFP KSK P AKGFVA+SF+
Sbjct: 772 MSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFF 831
Query: 2001 SGLTATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDYTVRNASASIIQ 1822
GL+ATEFFFHTM GREGLVDTAVKTADTGYMSRRLMKALEDL+++YD TVRNASA I+Q
Sbjct: 832 DGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQ 891
Query: 1821 FFYGDDCMDPSQMEEKSGQPLNFDRLLMKVKATCPADDQISLSPLEICERTDERLSEHDM 1642
F YGDD MDPSQMEEK G+PLNF RL MKVKATCP + SLS EICE +ERLS HDM
Sbjct: 892 FMYGDDGMDPSQMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSYHDM 951
Query: 1641 TPEGGCSEAFRDLLSKFLKEKCVANLRNTIRNLEWNGDQHGGEDRRFLEKFCPNISGITS 1462
TPEGGCSEAFR LS FL + L+N +L +Q+ G+DR +LEK NISGIT
Sbjct: 952 TPEGGCSEAFRSSLSDFLIKNLAETLKNLRESLLLGEEQYEGDDRGYLEKIALNISGITK 1011
Query: 1461 RQLEVFLRVCISRYHAKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVP 1282
RQL+VFL CISRYH K+ GEPGTQMTLKTFHFAGVASMNVTLGVP
Sbjct: 1012 RQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVP 1071
Query: 1281 RIKEIIDAKKNISTPIITAKLEREYNPKEARIAKARIEKTLLSQVAKSIKIVMSARLASI 1102
RIKEII+A K I+TPIIT KL N AR+ KARIEKTLL QVAKS+KIV+++RLASI
Sbjct: 1072 RIKEIINAAKKITTPIITTKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVLASRLASI 1131
Query: 1101 VITLDLEMIQALRLHVDAYRVKQSILQTKRLKLKEQHVKVLNTRKLEVVPQADKSKLHFE 922
I+LD+E IQ +L +DAY VKQSILQT ++KLKE +KVLN RKLEV PQA+K KLHFE
Sbjct: 1132 AISLDMETIQVSQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQANKDKLHFE 1191
Query: 921 LHTIKNKLPMVVVSGINTVERVIINKEDK-----EKKMPKYNLFVEG 796
LH +KNKLP VVV GI TV+R ++NKE + + K Y L VEG
Sbjct: 1192 LHRLKNKLPAVVVKGITTVQRAVVNKEQQKDRKNDVKGETYELLVEG 1238
>gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlisea aurea]
Length = 1368
Score = 1748 bits (4527), Expect = 0.0
Identities = 898/1377 (65%), Positives = 1067/1377 (77%), Gaps = 8/1377 (0%)
Frame = -3
Query: 4497 IQFTKQPYIEDVGPRRIESIRFSTFGESEILKGGDVEVYRGVYYDPSKKPIEHGLLDPHM 4318
+Q TKQPYIEDVG RRIESI FST SE+LK VEVY+G YYD +KKP+ +GLLD M
Sbjct: 1 LQSTKQPYIEDVGSRRIESINFSTLSGSEVLKTAVVEVYKGSYYDANKKPVSNGLLDMRM 60
Query: 4317 GPTLKGGLCETCHGTFSQCPGHYGYLTLALPVYHAGYLTNILDILKCICKQCSSVLLAEK 4138
GP K +C TCHG F +CPGHYGYL LALPVY+ GYL+NI+DILKCICK CS VLL EK
Sbjct: 61 GPPNKRSVCGTCHGNFQECPGHYGYLALALPVYNVGYLSNIVDILKCICKNCSRVLLEEK 120
Query: 4137 DRLAFLQKMRNPKMEPLGKTQLQKKVVEKCNRLVASGRKATVCPKCGYINGMVKKNTKML 3958
+ FL+KMRNP++EPL KT L KK+V++CN S + A CP+CG+INGMVK+
Sbjct: 121 EHHGFLRKMRNPRLEPLKKTDLFKKIVKRCNSKAGSNKLAK-CPRCGHINGMVKRAPYK- 178
Query: 3957 GIIHERSRVNDSSSNEYRSALSHIQEFNASSCSVPDEINPKVVYSLLKNVKDEDCELLYL 3778
++++R RV DS E +SA ++ ++ S D + V+ LL+N+ DEDCELLY+
Sbjct: 179 -VMYDRGRVIDSQMEECQSAGPSMKASRGNTTSTLDAL---FVFRLLRNMLDEDCELLYI 234
Query: 3777 SDRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLHQEISDTSLP 3598
DRPEKLM VDGGTQSNENDITERLK II+ANA+L Q++ +T++
Sbjct: 235 HDRPEKLMVTNILVPPTAIRPSVFVDGGTQSNENDITERLKYIIEANANLSQQLLETNIY 294
Query: 3597 TKSLNAWIDLQVEVAQYINSDVRGIP-FSAPTTKPLSGFVQRLKGKQGRFRGNLSGKRVE 3421
K + +W LQ+EVAQYINSD RG+P + ++KPLSGFVQRLKGKQGRFRGNLSGKRVE
Sbjct: 295 KKGVTSWETLQIEVAQYINSDTRGLPLYGGGSSKPLSGFVQRLKGKQGRFRGNLSGKRVE 354
Query: 3420 YTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKFIK 3241
YTGRTVISPDPNLKITEVAVPILMA+ILTYPERVSH NI +LR+CVR GPN+YPGAKFI+
Sbjct: 355 YTGRTVISPDPNLKITEVAVPILMAKILTYPERVSHQNIAELRECVRRGPNEYPGAKFIR 414
Query: 3240 QTGADPISLISAARKRYADELKFGDIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPW 3061
Q ISL ++RK +AD LK+GDIVDRHL+DGD+VLFNRQPSLHRMSIMCHRARIMPW
Sbjct: 415 QPDGTEISLRFSSRKIHADALKYGDIVDRHLKDGDIVLFNRQPSLHRMSIMCHRARIMPW 474
Query: 3060 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQ 2881
RTLRFNESVCNPYNADFDGDEMNMHVPQTEE+R EA+MLMGVQNNLCTPKNGE+LVASTQ
Sbjct: 475 RTLRFNESVCNPYNADFDGDEMNMHVPQTEESRAEAIMLMGVQNNLCTPKNGEVLVASTQ 534
Query: 2880 DFLTSSFLITRKDTFYDRASFSLICSYMGNGMDQIDLPTPALVKPVELWTGKQLFNILLR 2701
DFLTSSFLITRKDTFYDR++FSLIC+++ +G+ +DLP PA+VKPVELWTGKQ+F++LLR
Sbjct: 535 DFLTSSFLITRKDTFYDRSAFSLICAFVSDGLGTVDLPMPAVVKPVELWTGKQIFSVLLR 594
Query: 2700 PHTQMRVFLNLTVAEKNYMKPKETMCLNDGFVYFRNSELISGQLGKATLGNGNKDGLYSV 2521
P +VF+NLTVAEK Y+K ETMC DGFV RNSELISGQLGKATLGNG+KDGLYS+
Sbjct: 595 PDKDRKVFVNLTVAEKIYVKSGETMCPRDGFVCIRNSELISGQLGKATLGNGSKDGLYSI 654
Query: 2520 LLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPGKLITEKEKKIRSGYEECDN 2341
LLRDYG+HAAA CMNRLAKLSARWIGNHGFSIGI+DVQP L TEK+ I Y +C
Sbjct: 655 LLRDYGAHAAADCMNRLAKLSARWIGNHGFSIGINDVQPGDILNTEKKTVIDDEYGQCIR 714
Query: 2340 FIDNFNKGQLELQPGHDAALTLEAKITQVLNNIRGETAKVCMDNLQWRNSPLIMSQCGSK 2161
+I+++ G+LEL PG + A TLEAKIT LN IR TA+VCM NL WRNSPLIMSQCGSK
Sbjct: 715 YIESYKSGKLELLPGCNKAETLEAKITGTLNKIRDTTAEVCMTNLSWRNSPLIMSQCGSK 774
Query: 2160 GSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPKKSKIPLAKGFVANSFYSGLTATE 1981
GSPINI QMVACVGQQSVGGRRAPNGF+DR+LPHF + +K P AKGFV NSFY+GL TE
Sbjct: 775 GSPINICQMVACVGQQSVGGRRAPNGFLDRTLPHFERGAKDPDAKGFVQNSFYTGLLPTE 834
Query: 1980 FFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDYTVRNASASIIQFFYGDDC 1801
FFFHTM GREGLVDTAVKTADTGYMSRRL+KALEDLS+ YD TVRNAS I+QF YGDD
Sbjct: 835 FFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSVQYDSTVRNASGCIVQFTYGDDG 894
Query: 1800 MDPSQMEEKSGQPLNFDRLLMKVKATCPADDQISLSPLE----ICERTDERLSEHDMTPE 1633
+DP+QMEEK+G PLNF+RL MK KATCP++ Q SL + I +E S D++
Sbjct: 895 LDPAQMEEKTGFPLNFERLFMKAKATCPSEGQPSLKAEDIDFIINRVIEENHSRSDISEM 954
Query: 1632 GGCSEAFRDLLSKFLKEKCVANLRNTIRNLEWNGDQHGGEDRRFLEKFCPNISGITSRQL 1453
CSE F L +FL ++ + + + N + +D+ +++ + SGIT +QL
Sbjct: 955 EKCSETFEASLLRFLNKRVYP---TGMLSEKLNSENISLQDKSYVQSVVSSTSGITQQQL 1011
Query: 1452 EVFLRVCISRYHAKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIK 1273
EVFL +C +RYH KK GEPGTQMTLKTFHFAGVASMNVTLGVPRI+
Sbjct: 1012 EVFLNMCFARYHPKKIECGTAVGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIR 1071
Query: 1272 EIIDAKKNISTPIITAKLEREYNPKEARIAKARIEKTLLSQVAKSIKIVMSARLASIVIT 1093
EIIDA K I TP+IT +L+R+ ARI K RIEKTLL ++AKS+K+ R ASIVI
Sbjct: 1072 EIIDAAKKIKTPVITTELQRKDCGITARIVKGRIEKTLLGEIAKSMKVSEMTRTASIVIK 1131
Query: 1092 LDLEMIQALRLHVDAYRVKQSILQTKRLKLKEQHVKVLNTRKLEVVPQADKSKLHFELHT 913
LD ++I+A +L +DAY VK+SIL T ++KLKEQ ++VLN +KL V +A++SKL FE
Sbjct: 1132 LDTKVIEAAQLFIDAYTVKESILLTPKMKLKEQQIRVLNRQKLTVSLEAERSKLEFESWA 1191
Query: 912 IKNKLPMVVVSGINTVERVIINKEDKEK---KMPKYNLFVEGMGLLEVMGTEGVEGCETK 742
++NKL VVV GI VER II E K + K L VEG G L V+G +GV+ TK
Sbjct: 1192 LQNKLKDVVVKGIKQVERAIIVDEANGKDPNQRKKLKLVVEGTGFLSVLGIQGVDARNTK 1251
Query: 741 SNHIMEILRTLGIEAARSSIIDEIRTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITRTG 562
SNHIME+ + LGIE+AR IIDEI+ TMS HGMTIDIRHMMLLADLMT KGEVLGITR G
Sbjct: 1252 SNHIMEVFQVLGIESARRQIIDEIQYTMSGHGMTIDIRHMMLLADLMTFKGEVLGITRYG 1311
Query: 561 VQKMKDSVLMLASFEKTADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVKQ 391
V+KM+DSVLMLASFE+TADHLF+A VNGR D+IEGVSECI++GIPM+ GTGM+K+KQ
Sbjct: 1312 VRKMRDSVLMLASFERTADHLFNAPVNGRVDRIEGVSECIMLGIPMRTGTGMMKIKQ 1368
>ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Glycine
max]
Length = 1391
Score = 1739 bits (4504), Expect = 0.0
Identities = 908/1415 (64%), Positives = 1077/1415 (76%), Gaps = 21/1415 (1%)
Frame = -3
Query: 4518 MRRAQAT-IQFTKQPYIEDVGPRRIESIRFSTFGESEILKGGDVEVYRGVYYDPSKKPIE 4342
M RA+ I FTK+P++ED GPR+I++++FST ESEI K +V+V++G YYD KKPI
Sbjct: 1 MNRARTEGITFTKEPFMEDTGPRKIKNMKFSTLSESEISKIAEVQVWKGSYYDSFKKPIH 60
Query: 4341 HGLLDPHMGPTLKGGLCETCHGTFSQCPGHYGYLTLALPVYHAGYLTNILDILKCICKQC 4162
GLLDP MGP K +C TC G F CPGHYGYL LALPV++ GYL+ I++ILKCICK C
Sbjct: 61 GGLLDPRMGPANKSLVCATCDGNFHDCPGHYGYLNLALPVFNVGYLSTIVEILKCICKGC 120
Query: 4161 SSVLLAEKDRLAFLQKMRNPKMEPLGKTQLQK-KVVEKCNRLVASGRKATVCPKCGYING 3985
+ +LL E R L+KMR+ K L K K +V++ C+++V CP+CGYING
Sbjct: 121 ARILLDEDTRKKHLKKMRSSKKSELDKIDFVKVRVIKDCSKVVN-------CPRCGYING 173
Query: 3984 MVKKNTKMLGIIHERSRVNDSSSNEYRSALSHIQEFNASSCSVPDEINPKVVYSLLKNVK 3805
VKK L IIH+ S+ + E SALS +++ A++ +NP V SL K +
Sbjct: 174 SVKKLPASLTIIHDCSKCRNYIVEELDSALSRMKDSRATTNVSNRILNPFQVLSLFKRML 233
Query: 3804 DEDCELLYLSDRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLH 3625
DEDCELLY+++RPEKL+ +D SNENDITERLK IIQANA L
Sbjct: 234 DEDCELLYVAERPEKLIMTNVVVPPIAIRPSVVMDESL-SNENDITERLKNIIQANAVLR 292
Query: 3624 QEISDTSLPTKSLNAWIDLQVEVAQYINSDVRGIPFSAPTTKPLSGFVQRLKGKQGRFRG 3445
QE+ +++ +K L+ W LQ EVAQ+INSDVRGIPF TK L+GFVQRLKGK GRFRG
Sbjct: 293 QELQESTFSSKFLDGWDILQNEVAQFINSDVRGIPFYMQPTKQLAGFVQRLKGKHGRFRG 352
Query: 3444 NLSGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQCVRNGPNK 3265
NLSGKRVEYTGRTVISPDPNLKI+EVA+PI MARILTYPERV+HHNIEKLRQCVRNGP+K
Sbjct: 353 NLSGKRVEYTGRTVISPDPNLKISEVAIPIHMARILTYPERVTHHNIEKLRQCVRNGPDK 412
Query: 3264 YPGAKFIKQTGADPISLISAARKRYADELKFGDIVDRHLEDGDVVLFNRQPSLHRMSIMC 3085
YPGA+ +++ G SL RKR ADEL+ GDIVDRHLEDGD+VLFNRQPSLHRMSIMC
Sbjct: 413 YPGARMLRRDGGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMC 472
Query: 3084 HRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNG 2905
HRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA++LMGV+NNLCTPKNG
Sbjct: 473 HRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMGVENNLCTPKNG 532
Query: 2904 EILVASTQDFLTSSFLITRKDTFYDRASFSLICSYMGNGMDQIDLPTPALVKPVELWTGK 2725
EILVASTQDFLTSSFLITRKDTFYDR++FSLICSY+G+GMD IDLPTPA+VKPVELW+GK
Sbjct: 533 EILVASTQDFLTSSFLITRKDTFYDRSTFSLICSYIGDGMDPIDLPTPAIVKPVELWSGK 592
Query: 2724 QLFNILLRPHTQMRVFLNLTVAEKNYMKPK---------ETMCLNDGFVYFRNSELISGQ 2572
QLF+I+LRPH MRV++NLTV E+NY + K +T+C NDGFVYFRNSELISGQ
Sbjct: 593 QLFSIILRPHANMRVYVNLTVKERNYTEDKKIKDKKIEWKTLCPNDGFVYFRNSELISGQ 652
Query: 2571 LGKATLGNGNKDGLYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPGKL 2392
+GK TLGNGNKDGL+SVLLRDY +HAAA+CMNRLAKLSARWIGNHGFSIGIDDVQP L
Sbjct: 653 VGKVTLGNGNKDGLFSVLLRDYRAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPKEIL 712
Query: 2391 ITEKEKKIRSGYEECDNFIDNFNKGQLELQPGHDAALTLEAKITQVLNNIRGETAKVCMD 2212
I +K++ I GY ECD I+ FNKG+LEL G DAA TLE +IT VLN +R KVCM
Sbjct: 713 INKKDETISEGYRECDKHIEAFNKGKLELLAGCDAAQTLETRITGVLNGLRDTAGKVCMQ 772
Query: 2211 NLQWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPKKSKIPL 2032
L WRNSPLIMSQCGSKGS INISQMVACVGQQSVGGRR PNGFIDRSLPHFP+KSK P
Sbjct: 773 TLHWRNSPLIMSQCGSKGSSINISQMVACVGQQSVGGRRTPNGFIDRSLPHFPRKSKTPA 832
Query: 2031 AKGFVANSFYSGLTATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDYT 1852
AKGFVANSFYSGL+ATEFFFHTM GREGLVDTAVKTADTGYMSR+LMK+LEDL +HYDYT
Sbjct: 833 AKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRQLMKSLEDLFLHYDYT 892
Query: 1851 VRNASASIIQFFYGDDCMDPSQMEEKSGQPLNFDRLLMKVKATCPAD-DQISLSPLEICE 1675
VRNA SI+QF YGDD MDP+ ME K+G+PLNF+RL +K KA CP D D LS ++ +
Sbjct: 893 VRNAGGSIVQFCYGDDGMDPAGMEGKNGKPLNFERLFLKSKAICPNDEDDEILSSSDVSK 952
Query: 1674 RTDERLSEHDMTP-------EGGCSEAFRDLLSKFLKEKCVANLRNTIRNLEWNGDQHGG 1516
E+LSE DM+ E G S F + L F+K+ N + +
Sbjct: 953 VVHEKLSEFDMSRLAEKGVFEVGFSADFVESLQSFIKD-----------NAKLTEEGFTD 1001
Query: 1515 EDRRFLEKFCPNISGITSRQLEVFLRVCISRYHAKKXXXXXXXXXXXXXXXGEPGTQMTL 1336
E + L+KF ISGIT +QL+VFL +C+SRYH+KK GEPGTQMTL
Sbjct: 1002 EHSQNLKKFGQRISGITRKQLDVFLNICLSRYHSKKMEAGAPVGATGAHSIGEPGTQMTL 1061
Query: 1335 KTFHFAGVASMNVTLGVPRIKEIIDAKKNISTPIITAKLEREYNPKEARIAKARIEKTLL 1156
KTFHFAGVASMNVTLGVPR+KEI++ K ISTPIITA LER+ N ARI K RIEKT L
Sbjct: 1062 KTFHFAGVASMNVTLGVPRVKEIMNGNKKISTPIITAILERDDNANTARIVKGRIEKTNL 1121
Query: 1155 SQVAKSIKIVMSARLASIVITLDLEMIQALRLHVDAYRVKQSILQTKRLKLKEQHVKVLN 976
QVAKSIK+VM++R AS+VITLD++ IQ L++DA VK+SIL+TK+ KLK +H+K+L+
Sbjct: 1122 GQVAKSIKVVMTSRSASVVITLDMKRIQDAHLNIDANIVKESILRTKKTKLKPEHIKILD 1181
Query: 975 TRKLEVVPQ-ADKSKLHFELHTIKNKLPMVVVSGINTVERVIINKEDKEKKMPKYNLFVE 799
+KLEVVPQ D+SK+HF+LH +KN LP VVV GI TV+RV+I+K+ K + K+ L VE
Sbjct: 1182 IKKLEVVPQDVDRSKIHFQLHYLKNLLPTVVVKGIKTVDRVVISKDTKAE---KFRLLVE 1238
Query: 798 GMGLLEVMGTEGVEGCETKSNHIMEILRTLGIEAARSSIIDEIRTTM-SSHGMTIDIRHM 622
G G EVMG EG++G +T SNHI E+ TLGIEAAR SI+ EI+ TM +HGM IDIRHM
Sbjct: 1239 GTGFREVMGVEGIDGRKTVSNHIHEVRDTLGIEAARESIVKEIKYTMVDTHGMNIDIRHM 1298
Query: 621 MLLADLMTSKGEVLGITRTGVQKMKDSVLMLASFEKTADHLFSAAVNGREDKIEGVSECI 442
MLLAD+MT+ G +LGI R G+ KM SVLMLASFE+TAD LF A+V GR+D I GVSE I
Sbjct: 1299 MLLADMMTATGHILGINRFGISKMGKSVLMLASFERTADILFQASVRGRDDSIGGVSESI 1358
Query: 441 IMGIPMQMGTGMLKVKQRTLQQEVKLNYALDPIIS 337
IMGIP+Q+GTGM+KVKQR E L + PI+S
Sbjct: 1359 IMGIPIQIGTGMIKVKQRLDPPE--LPHGTSPILS 1391
>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 1394
Score = 1725 bits (4467), Expect = 0.0
Identities = 895/1397 (64%), Positives = 1063/1397 (76%), Gaps = 21/1397 (1%)
Frame = -3
Query: 4515 RRAQATIQFTKQPYIEDVGPRRIESIRFSTFGESEILKGGDVEVYRGVYYDPSKKPIEHG 4336
+RAQ I +TKQPYIEDVGPRRI+SI+FST S+ILK + +V+ G YYD +KK I G
Sbjct: 3 QRAQDII-YTKQPYIEDVGPRRIKSIQFSTMSGSDILKASECQVHLGQYYDANKKAIVGG 61
Query: 4335 LLDPHMGPTLKGGLCETCHGTFSQCPGHYGYLTLALPVYHAGYLTNILDILKCICKQCSS 4156
LLD MG K G C+TC G+F+ CPGH+GYL L LPVY+ GYL+ ILDILKCICK CS
Sbjct: 62 LLDTRMGAPNKHGTCQTCGGSFTDCPGHFGYLNLVLPVYNVGYLSTILDILKCICKSCSR 121
Query: 4155 VLLAEKDRLAFLQKMRNPKMEPLGKTQLQKKVVEKCNRLVASGRKATVCPKCGYINGMVK 3976
VL+ EK R ++L++MRNP+ EPL K +L K++V+KC+ + +S KA C +CGY+NGMVK
Sbjct: 122 VLVDEKLRKSYLKRMRNPRTEPLKKNELMKEIVKKCSSMASS--KAVKCLRCGYMNGMVK 179
Query: 3975 KNTKMLGIIHERSRVNDSSSNEYRSALSHIQEFNASSCSVPDEINPKVVYSLLKNVKDED 3796
K ++GIIH+RS++ D E +SA+ H +E A +NP V SL + + +ED
Sbjct: 180 KAGSVVGIIHDRSKLIDGYLEECKSAIGHTREARAPIGLATYILNPVRVLSLFQRMVEED 239
Query: 3795 CELLYLSDRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLHQEI 3616
CELLYL RPEKL+ +G +QSNENDITERLK+IIQ NA L E+
Sbjct: 240 CELLYLQGRPEKLIITTIAVPPISIRPSVFTEG-SQSNENDITERLKQIIQFNAKLRLEL 298
Query: 3615 SD-TSLPTKSLNAWIDLQVEVAQYINSDVRGIPFSAPTTKPLSGFVQRLKGKQGRFRGNL 3439
+ K L W +LQ V YINSDVR IP +PLSGFVQRL GKQGRFR NL
Sbjct: 299 LEGRRTGIKYLIGWDELQAVVTLYINSDVR-IPLDMQVGRPLSGFVQRLTGKQGRFRQNL 357
Query: 3438 SGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQCVRNGPNKYP 3259
+GKRVE+TGRTVISPDPNLKITEVA+PI MARILTYPERV+HHNIEKLRQCV NG KYP
Sbjct: 358 AGKRVEFTGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCVNNGSYKYP 417
Query: 3258 GAKFIKQTGADPISLISAARKRYADELKFGDIVDRHLEDGDVVLFNRQPSLHRMSIMCHR 3079
GA+ + L RKR A+ELK G IV RHLEDGDVVLFNRQPSLHRMSIMCHR
Sbjct: 418 GARMVTYPDGSSKMLTGNYRKRIAEELKSGCIVHRHLEDGDVVLFNRQPSLHRMSIMCHR 477
Query: 3078 ARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEI 2899
ARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA +LMGVQNNLCTPKNGEI
Sbjct: 478 ARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAFLLMGVQNNLCTPKNGEI 537
Query: 2898 LVASTQDFLTSSFLITRKDTFYDRASFSLICSYMGNGMDQIDLPTPALVKPVELWTGKQL 2719
LVASTQDFLTSSFLITRKDTFYDRA+FSL+CSYM +GMD +DLPTP+++KP+ELWTGKQL
Sbjct: 538 LVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMNDGMDLVDLPTPSVLKPIELWTGKQL 597
Query: 2718 FNILLRPHTQMRVFLNLTVAEKNYMKP-------KETMCLNDGFVYFRNSELISGQLGKA 2560
F++LLRPH +RV++NL + EKNY +P +ETMC NDG+VYFRNSELISGQLGKA
Sbjct: 598 FSVLLRPHANVRVYVNLILKEKNYSRPNKEHKKERETMCPNDGYVYFRNSELISGQLGKA 657
Query: 2559 TLGNGNKDGLYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPGKLITEK 2380
TLGNGNKDGLYS+LLRDY ++AAATCMNRLAKLSARWIGNHGFSIGIDDVQP KLI EK
Sbjct: 658 TLGNGNKDGLYSILLRDYNAYAAATCMNRLAKLSARWIGNHGFSIGIDDVQPGKKLIDEK 717
Query: 2379 EKKIRSGYEECDNFIDNFNKGQLELQPGHDAALTLEAKITQVLNNIRGETAKVCMDNLQW 2200
K I +GY C+ I ++N G+L L+ G DA TLE +IT+ LN +R E VCM L W
Sbjct: 718 GKTISNGYRHCNKLIADYNGGRLALKSGCDATQTLETEITERLNKLREEAGDVCMKELHW 777
Query: 2199 RNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPKKSKIPLAKGF 2020
RNSPLIMSQCGSKGSPINISQM+ACVGQQSVGG RAP+GFIDRSLPHFP+KSK P AKGF
Sbjct: 778 RNSPLIMSQCGSKGSPINISQMIACVGQQSVGGSRAPDGFIDRSLPHFPRKSKTPAAKGF 837
Query: 2019 VANSFYSGLTATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDYTVRNA 1840
VANSFYSGL+ATEFFFHTM GREGLVDTAVKTADTGYM+RRL K LEDL + YD TV++A
Sbjct: 838 VANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMARRLSKGLEDLCVQYDNTVQDA 897
Query: 1839 SASIIQFFYGDDCMDPSQMEEKSGQPLNFDRLLMKVKATCPADDQISLSPLEICERTDER 1660
I+QF YGDD +DP+ ME K+G PLNFDRL MKVKATC A++ LSP +I
Sbjct: 898 GGGIVQFLYGDDGLDPAIMEGKAGVPLNFDRLFMKVKATCGAEEDEYLSPSDISNIVQSL 957
Query: 1659 LSEHDMTPEGGCSEAFRDLLSKFLKE-----KCVANLRN--TIRNLEWNGDQHGGED-RR 1504
L +H+ T +G CSE+FR LS FL + +C+ L + + N E + G +
Sbjct: 958 LLKHNGTLDGICSESFRKSLSSFLGDQAKRLECLMKLVDGVEVENFENIKNVEGLTGISK 1017
Query: 1503 FLEKFCPNISGITSRQLEVFLRVCISRYHAKKXXXXXXXXXXXXXXXGEPGTQMTLKTFH 1324
EK +SGIT +QLEVFL+ C+ RY K+ GEPGTQMTLKTFH
Sbjct: 1018 NTEKIAQKVSGITEKQLEVFLKTCLDRYVWKRIEPGTAIGAIGAQSIGEPGTQMTLKTFH 1077
Query: 1323 FAGVASMNVTLGVPRIKEIIDAKKNISTPIITAKLEREYNPKEARIAKARIEKTLLSQVA 1144
FAGVASMN+T GVPRIKEII+ K ISTPIIT +LE N ARI K RI+KT+L QVA
Sbjct: 1078 FAGVASMNITQGVPRIKEIINGAKRISTPIITVELEHNSNVNAARIIKGRIQKTVLGQVA 1137
Query: 1143 KSIKIVMSARLASIVITLDLEMIQALRLHVDAYRVKQSILQTKRLKLKEQHVKVLNTRKL 964
KSIKIVM++R AS+ +TLD++ I+ +L +DA V++ IL+T ++K K Q + VL KL
Sbjct: 1138 KSIKIVMTSRSASVKVTLDMKTIREAQLSLDANIVRELILETPKIKRKLQRINVLEDGKL 1197
Query: 963 EVVPQADKSKLHFELHTIKNKLPMVVVSGINTVERVIINKE-----DKEKKMPKYNLFVE 799
EV P D++KLHFELH++KN LP VVV GI TVERV+I ++ + ++ PKYN+FVE
Sbjct: 1198 EVFPGGDRNKLHFELHSLKNMLPAVVVKGIKTVERVVIAQKKLDDAENDQGGPKYNMFVE 1257
Query: 798 GMGLLEVMGTEGVEGCETKSNHIMEILRTLGIEAARSSIIDEIRTTMSSHGMTIDIRHMM 619
GMGL VMGTEGV+G +TKSNHI+E+ TLGIEAAR IIDEI+ TM SHGM+IDIRHMM
Sbjct: 1258 GMGLQAVMGTEGVDGRKTKSNHIIEVQETLGIEAARKCIIDEIKGTMESHGMSIDIRHMM 1317
Query: 618 LLADLMTSKGEVLGITRTGVQKMKDSVLMLASFEKTADHLFSAAVNGREDKIEGVSECII 439
LLAD+MTS+G VLGITR G+QKM SVLMLASFEKT+DHLF+A+V G++DKIEGVSECII
Sbjct: 1318 LLADVMTSRGVVLGITRFGIQKMDKSVLMLASFEKTSDHLFNASVKGKDDKIEGVSECII 1377
Query: 438 MGIPMQMGTGMLKVKQR 388
MGIP+ +GTG+LK++QR
Sbjct: 1378 MGIPVAIGTGVLKIQQR 1394
>ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus
communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA
polymerase III largest subunit, putative [Ricinus
communis]
Length = 1383
Score = 1724 bits (4465), Expect = 0.0
Identities = 901/1384 (65%), Positives = 1060/1384 (76%), Gaps = 24/1384 (1%)
Frame = -3
Query: 4416 SEILKGGDVEVYRGVYYDPSKKPIEHGLLDPHMGPTLK-GGLCETCHGTFSQCPGHYGYL 4240
+EILK + +V+ G YYD ++KPI+ GLLDP +GP K CETC F +CPGH+GYL
Sbjct: 5 AEILKAAECQVHLGSYYDSTRKPIQAGLLDPRLGPATKQSSACETCGADFHECPGHFGYL 64
Query: 4239 TLALPVYHAGYLTNILDILKCICKQCSSVLLAEKDRLAFLQKMRNPKMEPLGKTQLQKKV 4060
L LPV++ GY++NILDILKCICK CS +L EK A L+KMRNP++E L K++L KK+
Sbjct: 65 NLVLPVFNVGYMSNILDILKCICKSCSRILYDEKLCKADLKKMRNPRIEHLRKSELVKKI 124
Query: 4059 VEKCNRLVASGRKATVCPKCGYINGMVKKNTKMLGIIHERSRVNDSSSNEYRSALSHIQE 3880
V+KC+ + ++ KA C +CG +NGMVKK +L IIH+R+++ D E RSA++H +E
Sbjct: 125 VKKCSSMTSN--KAVKCTRCGDMNGMVKKAGSVLSIIHDRAKLVDGYLEECRSAIAHTKE 182
Query: 3879 FNASSCSVPDEINPKVVYSLLKNVKDEDCELLYLSDRPEKLMXXXXXXXXXXXXXXXXVD 3700
A + P V SL K + +EDCE+L L DRPEKL+ D
Sbjct: 183 SRAPISLATYILTPVKVLSLFKRIPEEDCEVLGLYDRPEKLIITNIAVPPISIRPSVFTD 242
Query: 3699 GGTQSNENDITERLKRIIQANASLHQEISDTSLPT-KSLNAWIDLQVEVAQYINSDVRGI 3523
G QSNENDITERLK+IIQANASL E+ + + K L++W LQ VA Y+NSDVR +
Sbjct: 243 G-LQSNENDITERLKQIIQANASLRMELLEGRMSVNKYLDSWDGLQAAVALYMNSDVR-V 300
Query: 3522 PFSAPTTKPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAVPILMAR 3343
P + KPLSGFVQRLKGKQGRFRGNLSGKRVE+TGRTVISPDPNLKITEVA+PI MAR
Sbjct: 301 PNNVEVGKPLSGFVQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPIHMAR 360
Query: 3342 ILTYPERVSHHNIEKLRQCVRNGPNKYPGAKFIKQTGADPISLISAARKRYADELKFGDI 3163
IL+YPERVSHHNIEKLRQ V NGP KYPGA ++ LI + RK A+EL FG I
Sbjct: 361 ILSYPERVSHHNIEKLRQLVSNGPQKYPGASTVRYPDGSSKRLIGSYRKTIAEELTFGCI 420
Query: 3162 VDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHV 2983
VDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHV
Sbjct: 421 VDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHV 480
Query: 2982 PQTEEARTEALMLMGV-QNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRASFSLIC 2806
PQTEEARTEAL+LMGV QNNLCTPKNGEILVASTQDFLTSSFLITR+DTFYDRA+FSL+C
Sbjct: 481 PQTEEARTEALLLMGVSQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRAAFSLMC 540
Query: 2805 SYMGNGMDQIDLPTPALVKPVELWTGKQLFNILLRPHTQMRVFLNLTVAEKNYMKPK--- 2635
SYM +GMD IDLPTPA++KP+ELWTGKQLF++LLRP+ +RV++NL V EK Y KPK
Sbjct: 541 SYMNDGMDLIDLPTPAILKPIELWTGKQLFSVLLRPNANVRVYVNLIVREKIYSKPKKGD 600
Query: 2634 ----ETMCLNDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYGSHAAATCMNRLA 2467
ETMC NDGFVY RNSELISGQLGKATLGNGNKDGLYS+LLRDY HAAATCMNRLA
Sbjct: 601 KREKETMCPNDGFVYIRNSELISGQLGKATLGNGNKDGLYSILLRDYNPHAAATCMNRLA 660
Query: 2466 KLS--ARWIGNHGFSIGIDDVQPPGKLITEKEKKIRSGYEECDNFIDNFNKGQLELQPGH 2293
KL ARWIGNHGFSIGIDDVQP KLI K K I +GY++CD I+ +N+G+L L+PG
Sbjct: 661 KLRQVARWIGNHGFSIGIDDVQPGKKLIDGKGKTISNGYQQCDKLIEQYNEGKLLLKPGC 720
Query: 2292 DAALTLEAKITQVLNNIRGETAKVCMDNLQWRNSPLIMSQCGSKGSPINISQMVACVGQQ 2113
DA TLE++IT+ LN +R E VCM L WRNSPLIMSQCGSKGS INISQMVACVGQQ
Sbjct: 721 DATQTLESEITEKLNKLREEAGDVCMKELHWRNSPLIMSQCGSKGSVINISQMVACVGQQ 780
Query: 2112 SVGGRRAPNGFIDRSLPHFPKKSKIPLAKGFVANSFYSGLTATEFFFHTMAGREGLVDTA 1933
SVGGRRAP+GFIDRSLPHFP+KSK P AKGFVANSFYSGL ATEFFFHTMAGREGLVDTA
Sbjct: 781 SVGGRRAPDGFIDRSLPHFPRKSKTPAAKGFVANSFYSGLMATEFFFHTMAGREGLVDTA 840
Query: 1932 VKTADTGYMSRRLMKALEDLSIHYDYTVRNASASIIQFFYGDDCMDPSQMEEKSGQPLNF 1753
VKTADTGYMSRRL+K LEDLSI YD TVRNAS I+QF YGDD +DP+ ME K G PLN
Sbjct: 841 VKTADTGYMSRRLIKGLEDLSIQYDNTVRNASGCIVQFLYGDDGLDPASMEGKGGVPLNL 900
Query: 1752 DRLLMKVKATCPADDQISLSPLEICERTDERLSEHDMTPEGGCSEAFRDLLSKFL----- 1588
DRL KVKATCP ++ LSPL+I + + L +HDM G CSEAF+ L+ FL
Sbjct: 901 DRLFSKVKATCPVREEDYLSPLDISDVVENLLLKHDMALGGICSEAFKKSLTSFLGSHAK 960
Query: 1587 KEKCVANLRNTIRNLEWNGDQHGG--EDRRFLEKFCPNISGITSRQLEVFLRVCISRYHA 1414
+ + + L + + + Q GG + + +E+ I G++ RQ+EVF++ CI+RY
Sbjct: 961 RLESMMKLADGVEDPTSENIQTGGIRGNSKIIERLAHKIFGVSERQIEVFVKTCINRYLW 1020
Query: 1413 KKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIDAKKNISTPI 1234
K+ GEPGTQMTLKTFHFAGVASMN+T GVPRIKEII+ K ISTPI
Sbjct: 1021 KRVEPGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKKISTPI 1080
Query: 1233 ITAKLEREYNPKEARIAKARIEKTLLSQVAKSIKIVMSARLASIVITLDLEMIQALRLHV 1054
ITA+LE+ N ARIAK RI+KT+L QVAKSIKIVM++R AS+VITLD++ IQ +L +
Sbjct: 1081 ITAELEQNTNVTAARIAKGRIQKTVLGQVAKSIKIVMTSRSASVVITLDMKTIQNAQLSL 1140
Query: 1053 DAYRVKQSILQTKRLKLKEQHVKVLNTRKLEVVPQADKSKLHFELHTIKNKLPMVVVSGI 874
DA VK++IL+T R+KLK QH+KVL+TRKLEV+P D+ ++HFELH +KN LP ++V GI
Sbjct: 1141 DANIVKEAILRTPRIKLKPQHIKVLDTRKLEVIPLGDRERVHFELHNLKNLLPSIIVQGI 1200
Query: 873 NTVERVII--NKED---KEKKMPKYNLFVEGMGLLEVMGTEGVEGCETKSNHIMEILRTL 709
TVER +I K D ++++P YN+ VEGMGL VMGTEGV+GC+T SNH+ME+ + L
Sbjct: 1201 KTVERAVIAQKKHDGKANDQELPTYNMLVEGMGLDLVMGTEGVDGCKTTSNHVMEVQKFL 1260
Query: 708 GIEAARSSIIDEIRTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITRTGVQKMKDSVLML 529
GIEAAR IIDEI TM HGM+IDIRHMMLL DLMT KGEVLGITR G+QKM SVLML
Sbjct: 1261 GIEAARKCIIDEINQTMEHHGMSIDIRHMMLLGDLMTFKGEVLGITRFGIQKMDKSVLML 1320
Query: 528 ASFEKTADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVKQRTLQQEVKLNYALD 349
ASFEKTADHL+ AAV GR+DKIEGVSECIIMGIPMQ+GTG+LKV+QR V LNY D
Sbjct: 1321 ASFEKTADHLYHAAVFGRDDKIEGVSECIIMGIPMQIGTGILKVQQRVDPPPV-LNYGSD 1379
Query: 348 PIIS 337
IIS
Sbjct: 1380 SIIS 1383
>ref|XP_004505923.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Cicer arietinum]
Length = 1399
Score = 1718 bits (4449), Expect = 0.0
Identities = 883/1407 (62%), Positives = 1079/1407 (76%), Gaps = 22/1407 (1%)
Frame = -3
Query: 4491 FTKQPYIEDVGPRRIESIRFSTFGESEILKGGDVEVYRGVYYDPSKKPIEHGLLDPHMGP 4312
FTK+P+IED+GPR+I I +ST E+EI K G+V+V++G YYD +KP GLLD MGP
Sbjct: 11 FTKEPFIEDLGPRKIAGITYSTLSEAEISKIGEVQVWKGTYYDAFRKPEADGLLDSRMGP 70
Query: 4311 TLKGGLCETCHGTFSQCPGHYGYLTLALPVYHAGYLTNILDILKCICKQCSSVLLAEKDR 4132
K +C TCHG F+ C GHYGYL L PV++ GYL ++ ILKCICK C+ +LL E R
Sbjct: 71 ANKSLVCATCHGNFADCQGHYGYLPLVQPVFNVGYLNTMVKILKCICKGCAGILLDEDTR 130
Query: 4131 LAFLQKMRNPKMEPLGKTQLQKKVVEKCNRLVASGRKATVCPKCGYINGMVKKNTKMLGI 3952
+L+KMRN K++ L K QL + ++++ K C +CGYING+VK L I
Sbjct: 131 KKYLKKMRNSKLDELQKIQLLESIMKRFR-----SAKFIKCQRCGYINGIVKLTRSTLRI 185
Query: 3951 IHERSRVNDSSSNEYRSALSHIQEFNASSCSVPDEINPKVVYSLLKNVKDEDCELLYLSD 3772
+H+ S + +E +SALSH++E+ A++ ++PK V+SL + DEDC LLYL++
Sbjct: 186 VHDCSHGKNDVVSELQSALSHMKEYRATNDLASRNLDPKSVHSLFTKMSDEDCALLYLAE 245
Query: 3771 RPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLHQEISDTSLPTK 3592
RPEKL+ +DG +QSNENDITE+L++IIQANA+LH+E+ ++ TK
Sbjct: 246 RPEKLIITNIAVPPIVIRPSVIMDG-SQSNENDITEKLRKIIQANAALHKELEES---TK 301
Query: 3591 SLNAWIDLQVEVAQYINSDVRGIPFSAPTTKPLSGFVQRLKGKQGRFRGNLSGKRVEYTG 3412
+ LQ VAQYINSDV+G P+S +KPL+GFVQR+KGKQGRFR NLSGKRVEYTG
Sbjct: 302 FQGGFEMLQFLVAQYINSDVKGGPYSMQASKPLTGFVQRIKGKQGRFRSNLSGKRVEYTG 361
Query: 3411 RTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKFIKQTG 3232
RTVISPDPNLKITEVA+PI MARILTYPERV+HHNIEKLRQC+RNGP+KYPGAK ++ G
Sbjct: 362 RTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCLRNGPDKYPGAKLLRHAG 421
Query: 3231 ADPISLISAARKRYADELKFGDIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTL 3052
+L + RKR ADEL+FGDIVDRHLEDGDVVLFNRQPSLHRMS+MCHRARIMPWRTL
Sbjct: 422 GTTWNLKVSCRKRLADELRFGDIVDRHLEDGDVVLFNRQPSLHRMSMMCHRARIMPWRTL 481
Query: 3051 RFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFL 2872
RFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL+LM VQNNLCTPKNGEILVASTQDFL
Sbjct: 482 RFNESVCNPYNADFDGDEMNLHVPQTEEARTEALLLMTVQNNLCTPKNGEILVASTQDFL 541
Query: 2871 TSSFLITRKDTFYDRASFSLICSYMGNGMDQIDLPTPALVKPVELWTGKQLFNILLRPHT 2692
TSSFLITRKDTFYDR++FSLICSYMG+GMD IDLPTPA++KPVELW+GKQLF+ILLRPH
Sbjct: 542 TSSFLITRKDTFYDRSTFSLICSYMGDGMDPIDLPTPAIIKPVELWSGKQLFSILLRPHA 601
Query: 2691 QMRVFLNLTVAEKNY-------MKPKETMCLNDGFVYFRNSELISGQLGKATLGNGNKDG 2533
+RV++NLTV EK + + +TMC NDGFVYFRNSELISGQLGK TLGNGNKDG
Sbjct: 602 NVRVYVNLTVKEKTHNAKLDDRKREMKTMCPNDGFVYFRNSELISGQLGKVTLGNGNKDG 661
Query: 2532 LYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPGKLITEKEKKIRSGYE 2353
L+SVLLRDY +HAAA+CMNRLAK SARWIGNHGFSIGIDDVQP LI K++ I +GY
Sbjct: 662 LFSVLLRDYKAHAAASCMNRLAKFSARWIGNHGFSIGIDDVQPKEILIHRKKETITTGYS 721
Query: 2352 ECDNFIDNFNKGQLELQPGHDAALTLEAKITQVLNNIRGETAKVCMDNLQWRNSPLIMSQ 2173
ECD FI+ FNKG+LEL PG DAA TLEAKI Q LN++R TAKVCM L WRNSPLIMSQ
Sbjct: 722 ECDGFIEAFNKGKLELAPGCDAAQTLEAKIFQKLNSLRDTTAKVCMQTLHWRNSPLIMSQ 781
Query: 2172 CGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPKKSKIPLAKGFVANSFYSGL 1993
CGSKGSPINI QMVACVGQQSVGG RA NGF+DRSLPHF KK+K P KGFVANSF++GL
Sbjct: 782 CGSKGSPINICQMVACVGQQSVGGCRAANGFVDRSLPHFTKKAKTPADKGFVANSFFTGL 841
Query: 1992 TATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDYTVRNASASIIQFFY 1813
+ATEFFFHTM GREGLVDTAVKTADTGYMSRRLMKALEDL +HYDYTVR+ + I+QF Y
Sbjct: 842 SATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLFLHYDYTVRDTNGGIVQFCY 901
Query: 1812 GDDCMDPSQMEEKSGQPLNFDRLLMKVKATCPAD-DQISLSPLEICERTDERL------- 1657
GDD MDPS ME K+G+PLNFDRL +K KA CP+D D I LS ++CE ++L
Sbjct: 902 GDDGMDPSGMEGKNGKPLNFDRLFLKSKAICPSDGDDIILSSSDVCEVIRKKLSEVGMSK 961
Query: 1656 ------SEHDMTPEGGCSEAFRDLLSKFLKEKCVANLRNTIRNLEWNGDQHGGEDRRFLE 1495
SE+D+ G S+ F L F+K+ L I ++ ++ L+
Sbjct: 962 LVEKDASENDIMSVVGFSDDFIKSLQAFVKDN--TKLTEAIA-------ENDSKNLTNLK 1012
Query: 1494 KFCPNISGITSRQLEVFLRVCISRYHAKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAG 1315
F P ISGI+ RQLEVFL +C+SRY KK GEPGTQMTLKTFHFAG
Sbjct: 1013 NFIPRISGISRRQLEVFLDICLSRYRIKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAG 1072
Query: 1314 VASMNVTLGVPRIKEIIDAKKNISTPIITAKLEREYNPKEARIAKARIEKTLLSQVAKSI 1135
VASMNVTLGVPRI EII+ K+I TPI+TA LER+ N AR+ K RIEKT L QVAKSI
Sbjct: 1073 VASMNVTLGVPRIIEIINGAKDIKTPIMTAILERDDNANTARMVKGRIEKTNLGQVAKSI 1132
Query: 1134 KIVMSARLASIVITLDLEMIQALRLHVDAYRVKQSILQTKRLKLKEQHVKVLNTRKLEVV 955
K+VM++R A++VI+LD+E IQ L++DA+ VK+SIL+T +LKLK ++VKVL+ +KL+V
Sbjct: 1133 KVVMTSRSATVVISLDMERIQDAHLNIDAHTVKESILRTAKLKLKAENVKVLDIKKLQVY 1192
Query: 954 PQ-ADKSKLHFELHTIKNKLPMVVVSGINTVERVIINKEDKEKKMPKYNLFVEGMGLLEV 778
P+ + ++++HF+L+ +KN LP VVV G+ TVER ++ + K+KK+ K+ L VEG GL +V
Sbjct: 1193 PRLSGRNEIHFQLNILKNLLPSVVVKGVKTVERAVLEIDKKDKKVEKFALLVEGTGLQQV 1252
Query: 777 MGTEGVEGCETKSNHIMEILRTLGIEAARSSIIDEIRTTMSSHGMTIDIRHMMLLADLMT 598
+G EGV+G +T+SNH+ME+L LGIEAARS+IID+I+ TM SHGM+ID+RH+MLLAD+MT
Sbjct: 1253 LGIEGVDGRKTRSNHVMEMLNVLGIEAARSTIIDQIQYTMGSHGMSIDVRHIMLLADIMT 1312
Query: 597 SKGEVLGITRTGVQKMKDSVLMLASFEKTADHLFSAAVNGREDKIEGVSECIIMGIPMQM 418
+G+VLG+TR G+QKM SVLMLASFE + DHLF A++ GR D IEGVS+CIIMG P+++
Sbjct: 1313 VRGQVLGMTRHGIQKMGRSVLMLASFESSTDHLFDASMRGRGDPIEGVSDCIIMGKPIRV 1372
Query: 417 GTGMLKVKQRTLQQEVKLNYALDPIIS 337
GTGM+ +KQR L V L +DPI+S
Sbjct: 1373 GTGMIDIKQR-LDPPV-LPKGIDPILS 1397
>gb|ESW04135.1| hypothetical protein PHAVU_011G070100g [Phaseolus vulgaris]
Length = 1392
Score = 1710 bits (4429), Expect = 0.0
Identities = 887/1405 (63%), Positives = 1063/1405 (75%), Gaps = 18/1405 (1%)
Frame = -3
Query: 4497 IQFTKQPYIEDVGPRRIESIRFSTFGESEILKGGDVEVYRGVYYDPSKKPIEHGLLDPHM 4318
I FTK+P++ED GPR+I++++FS +SEI K G+V+V++G YYD KKPI GLLDP M
Sbjct: 9 ITFTKEPFMEDAGPRKIKNMKFSMLSDSEISKLGEVQVWKGSYYDSFKKPIHGGLLDPRM 68
Query: 4317 GPTLKGGLCETCHGTFSQCPGHYGYLTLALPVYHAGYLTNILDILKCICKQCSSVLLAEK 4138
GP K C TCHG F CPGHYGYL LALPV++ GYL +I++ILKCICK C+ +LL E
Sbjct: 69 GPANKSLGCATCHGNFHDCPGHYGYLNLALPVFNVGYLGSIVEILKCICKGCARILLDED 128
Query: 4137 DRLAFLQKMRNPKMEPLGKTQLQK-KVVEKCNRLVASGRKATVCPKCGYINGMVKKNTKM 3961
R L+KMR+ K L K K ++++ C+++V CP+CGYING VKK
Sbjct: 129 TRKKHLKKMRSSKKSELDKMDFVKVRIIKDCSKVVN-------CPRCGYINGSVKKLPAS 181
Query: 3960 LGIIHERSRVNDSSSNEYRSALSHIQEFNASSCSVPDEINPKVVYSLLKNVKDEDCELLY 3781
L I+H+ S+ ++ E S LS I++ A++ +NP V SL + + DEDCELLY
Sbjct: 182 LIIMHDCSKCKNNIVEELESTLSRIKDSKATANVSNRILNPFQVLSLFRKMLDEDCELLY 241
Query: 3780 LSDRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLHQEISDTSL 3601
+++RPEKL+ +D SNENDITERLK IIQANA L QE+ ++S+
Sbjct: 242 VAERPEKLIITNIVVPPIAIRPSVVMDESL-SNENDITERLKNIIQANAVLRQELQESSV 300
Query: 3600 PTKSLNAWIDLQVEVAQYINSDVRGIPFSAPTTKPLSGFVQRLKGKQGRFRGNLSGKRVE 3421
+K L+ W LQ EVAQ+INS+VRGIPF +TK L+GFVQRLKGK GRFRGNLSGKRVE
Sbjct: 301 SSKFLDGWEILQNEVAQFINSEVRGIPFYMQSTKQLAGFVQRLKGKHGRFRGNLSGKRVE 360
Query: 3420 YTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKFIK 3241
YTGRTVISPDPNLKI+EVA+PILMA ILTYPERV+HHNIEKLRQCVRNGP+KYPGA+ ++
Sbjct: 361 YTGRTVISPDPNLKISEVAIPILMASILTYPERVTHHNIEKLRQCVRNGPDKYPGARMLR 420
Query: 3240 QTGADPISLISAARKRYADELKFGDIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPW 3061
+ G SL RKR ADEL+ GDIVDRHLEDGD+VLFNRQPSLHRMSIM HRARIMPW
Sbjct: 421 RDGGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPW 480
Query: 3060 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQ 2881
RTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA++LMGVQNNLCTPKNGEILVASTQ
Sbjct: 481 RTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQ 540
Query: 2880 DFLTSSFLITRKDTFYDRASFSLICSYMGNGMDQIDLPTPALVKPVELWTGKQLFNILLR 2701
DFLTSSFL+TRKDTFYDR++F+ IC+++G+G+D IDLPTPA+VKPVELW+GKQLF++LLR
Sbjct: 541 DFLTSSFLVTRKDTFYDRSAFTNICTFIGDGLDLIDLPTPAIVKPVELWSGKQLFSLLLR 600
Query: 2700 PHTQMRVFLNLTVAEKNYMK------PKETMCLNDGFVYFRNSELISGQLGKATLGNGNK 2539
PH +V++NLTV EK Y K +T+C NDGFVYFRN+ELISGQ+GK TLGNGNK
Sbjct: 601 PHANFKVYVNLTVKEKTYTKLDDKKRELKTLCPNDGFVYFRNTELISGQIGKVTLGNGNK 660
Query: 2538 DGLYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPGKLITEKEKKIRSG 2359
DGL+SVLLRDY +HAAA+CMNRLAKLSARWIGNHGFSIGIDDVQP LI +K++ + G
Sbjct: 661 DGLFSVLLRDYKAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPKEILIKKKDETLSEG 720
Query: 2358 YEECDNFIDNFNKGQLELQPGHDAALTLEAKITQVLNNIRGETAKVCMDNLQWRNSPLIM 2179
Y++CDN I FNKG+LEL G DA TLE +IT VLN +R KVCM L WRNSPLIM
Sbjct: 721 YKKCDNHIQAFNKGKLELLAGCDAPQTLETQITGVLNGLRDMAGKVCMQTLHWRNSPLIM 780
Query: 2178 SQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPKKSKIPLAKGFVANSFYS 1999
SQCGSKGSPINISQMVACVGQQSVGGRRAPNGF+DRSLPHFP +K P AKGFVANSFYS
Sbjct: 781 SQCGSKGSPINISQMVACVGQQSVGGRRAPNGFLDRSLPHFPLNAKTPAAKGFVANSFYS 840
Query: 1998 GLTATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDYTVRNASASIIQF 1819
GL+ATEFFFHTM GREGLVDTAVKTADTGYMSR+LMK++EDL +HYDYTVRNA SI+QF
Sbjct: 841 GLSATEFFFHTMGGREGLVDTAVKTADTGYMSRQLMKSMEDLFLHYDYTVRNAGGSIVQF 900
Query: 1818 FYGDDCMDPSQMEEKSGQPLNFDRLLMKVKATCP-ADDQISLSPLEICERTDERLSEHDM 1642
YGDD MDP ME K+G+PLNF+RL +K KA CP DD LS ++C+ E+LSE +
Sbjct: 901 CYGDDGMDPGGMEGKNGKPLNFERLFLKSKAICPNKDDDEVLSSSDVCKVVQEKLSEFGV 960
Query: 1641 TP-------EGGCSEAFRDLLSKFLKEKCVANLRNTIRNLEWNGDQHGGEDRRFLEKFCP 1483
+ E G S F L F+K+ N + + ++ + L+KF
Sbjct: 961 SREVEKGVLEVGFSADFVQSLQSFIKD-----------NTKLTEETFTDDNSQILKKFGE 1009
Query: 1482 NISGITSRQLEVFLRVCISRYHAKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASM 1303
ISGIT QLEVFL +C+SRYH+KK GEPGTQMTLKTFHFAGVASM
Sbjct: 1010 RISGITRAQLEVFLNICLSRYHSKKIEAGAPVGATGAHSIGEPGTQMTLKTFHFAGVASM 1069
Query: 1302 NVTLGVPRIKEIIDAKKNISTPIITAKLEREYNPKEARIAKARIEKTLLSQVAKSIKIVM 1123
NVTLGVPR+KEI++ K ISTPIITA LER ARI K RIEKT L QVAKSIK+V+
Sbjct: 1070 NVTLGVPRVKEIMNGNKKISTPIITAILERTDCANTARIVKGRIEKTNLGQVAKSIKVVV 1129
Query: 1122 SARLASIVITLDLEMIQALRLHVDAYRVKQSILQTKRLKLKEQHVKVLNTRKLEVVPQ-A 946
++RLAS+VITLD+E IQ L++DA VK+SILQTK+ KLK +H+K+L+ +KL VVPQ
Sbjct: 1130 TSRLASVVITLDMERIQDAHLNIDANIVKESILQTKKAKLKPEHIKILDVKKLRVVPQDG 1189
Query: 945 DKSKLHFELHTIKNKLPMVVVSGINTVERVIINK-EDKEKKMPKYNLFVEGMGLLEVMGT 769
D+SKLHF+L+ +KN LP VVV GI T +RV+I+K EDK K K+ L VEG G EVMG
Sbjct: 1190 DRSKLHFQLNYLKNLLPSVVVKGIKTADRVVISKEEDKITKAEKFKLLVEGTGFREVMGV 1249
Query: 768 EGVEGCETKSNHIMEILRTLGIEAARSSIIDEIRTTM-SSHGMTIDIRHMMLLADLMTSK 592
EGV+GC+T SNHI E+ TLGIEAAR I+ EI+ M +HGM ID RHMMLLAD+MT+
Sbjct: 1250 EGVDGCKTVSNHIHEVRDTLGIEAARECIVKEIKYVMVDTHGMNIDTRHMMLLADVMTAT 1309
Query: 591 GEVLGITRTGVQKMKDSVLMLASFEKTADHLFSAAVNGREDKIEGVSECIIMGIPMQMGT 412
G +LGI R G+ KM SVLMLASFE+TAD LF A+V GR+D I GVSE IIMGIP+ +GT
Sbjct: 1310 GHILGINRFGISKMGKSVLMLASFERTADILFQASVRGRDDSIGGVSESIIMGIPITIGT 1369
Query: 411 GMLKVKQRTLQQEVKLNYALDPIIS 337
GM+KVKQR + L + PI+S
Sbjct: 1370 GMIKVKQRL--ELPDLPHGASPILS 1392
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
Length = 1383
Score = 1694 bits (4386), Expect = 0.0
Identities = 876/1401 (62%), Positives = 1053/1401 (75%), Gaps = 7/1401 (0%)
Frame = -3
Query: 4518 MRRAQATIQFTKQPYIEDVGPRRIESIRFSTFGESEILKGGDVEVYRGVYYDPSKKPIEH 4339
M R + ++ TK+P+IEDVG RRI+SIRFS F +E+ + +V+V+ Y+ KP+ +
Sbjct: 1 MARPEEKLRCTKEPFIEDVGTRRIKSIRFSMFSGNEVRQSAEVQVWNSRIYNHEMKPVPN 60
Query: 4338 GLLDPHMGPTLKGGLCETCHGTFSQCPGHYGYLTLALPVYHAGYLTNILDILKCICKQCS 4159
GLLD MG K G C TCHG+F++CPGH+GYL LALPV++ G+ ILD+LKCICK CS
Sbjct: 61 GLLDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKSCS 120
Query: 4158 SVLLAEKDRLAFLQKMRNPKMEPLGKTQLQKKVVEKCNRLVASGRKATVCPKCGYINGMV 3979
VLL EKDRL FL+KMRNPK +PL K+ + KKV +KC K + CP CG+ING+
Sbjct: 121 RVLLMEKDRLEFLKKMRNPKADPLQKSAIMKKVRDKC--------KLSRCPWCGFINGVA 172
Query: 3978 KKNTKMLGIIHERSRVNDSSSNEYRSALSHIQEFNASSCSVPDEINPKVVYSLLKNVKDE 3799
KK L I+H+ S+ D S+ E R ALSH +E S S ++P +V SL K + DE
Sbjct: 173 KKGRAGLIILHDCSKTLDGSTEELRDALSHKKE--KLSISAVRMLDPAIVLSLFKRMTDE 230
Query: 3798 DCELLYLSDRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLHQE 3619
DCELL L DRPEKL+ V GG SNE+ IT LK I N+ L +
Sbjct: 231 DCELLNLGDRPEKLIVTEIAVPPVPIRPSVFVAGGRMSNEDSITVILKSIANTNSILKEN 290
Query: 3618 ISDTSLPTKSLNAWIDLQVEVAQYINSDVRGIPFSAPTTKPLSGFVQRLKGKQGRFRGNL 3439
+ K + W LQ++V +YINSD +P S G VQRLKGK GRFRGNL
Sbjct: 291 LQTGGQFMKCFDCWQHLQLQVVEYINSDAPSLPESQHR-----GLVQRLKGKTGRFRGNL 345
Query: 3438 SGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQCVRNGPNKYP 3259
SGKR EYTGRTVISPDPNL+ITEVA+PILMAR+LTYPERVS++NIEKLRQC+RNGP+K+P
Sbjct: 346 SGKRTEYTGRTVISPDPNLRITEVAIPILMARVLTYPERVSYYNIEKLRQCIRNGPHKHP 405
Query: 3258 GAKFIKQTGADPISLISAARKRYADELKFGDIVDRHLEDGDVVLFNRQPSLHRMSIMCHR 3079
GA FI Q + L R+ A +LK+G +V+RHLEDGD+VLFNRQPSLHRMSIM HR
Sbjct: 406 GANFIIQPDGTKLHLKYCDRRIAARDLKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHR 465
Query: 3078 ARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEI 2899
ARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALMLMGVQNNLCTPKNGEI
Sbjct: 466 ARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEI 525
Query: 2898 LVASTQDFLTSSFLITRKDTFYDRASFSLICSYMGNGMDQIDLPTPALVKPVELWTGKQL 2719
LVASTQDFLTSSFL+TRKD FYDR+SFSL+CSY+G+ M+ IDLPTPAL+KP+ELWTGKQL
Sbjct: 526 LVASTQDFLTSSFLVTRKDNFYDRSSFSLLCSYLGDAMENIDLPTPALIKPIELWTGKQL 585
Query: 2718 FNILLRPHTQMRVFLNLTVAEKNYMKPK------ETMCLNDGFVYFRNSELISGQLGKAT 2557
F++L+RP+ +VFLNLTV EK Y PK E MC NDGFVYFRNSEL+SGQ+GKAT
Sbjct: 586 FSVLVRPNACTKVFLNLTVKEKIYKTPKGSTLEPEAMCPNDGFVYFRNSELLSGQVGKAT 645
Query: 2556 LGNGNKDGLYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPGKLITEKE 2377
LGNGNKDG++S L+RDY SHAAA+CMNRLAK SAR+IGNHGFSIG+DDVQP L EK+
Sbjct: 646 LGNGNKDGMFSTLVRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNQEKK 705
Query: 2376 KKIRSGYEECDNFIDNFNKGQLELQPGHDAALTLEAKITQVLNNIRGETAKVCMDNLQWR 2197
KI GY++C + I +++KG L LQPG +AA TLE IT+VLN IR E KVCM+ L WR
Sbjct: 706 MKIDGGYKDCHDLIASYSKGALRLQPGCNAAQTLEQSITRVLNEIREEAGKVCMNTLHWR 765
Query: 2196 NSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPKKSKIPLAKGFV 2017
NSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDR+LPHFP SK P AKGFV
Sbjct: 766 NSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFV 825
Query: 2016 ANSFYSGLTATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDYTVRNAS 1837
ANSFY+GLTATEFFFHTM GREGLVDTAVKTA+TGYMSRRLMK LEDLS+ YD TVRNAS
Sbjct: 826 ANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNAS 885
Query: 1836 ASIIQFFYGDDCMDPSQMEEKSGQPLNFDRLLMKVKATCPADDQISLSPLEICERTDERL 1657
I+QF YGDD MDP++ME K G+PLN D+L MKV ATCP Q +LSP EI + +++L
Sbjct: 886 GGIVQFLYGDDGMDPAKMEGKDGKPLNLDQLFMKVMATCPQRGQNTLSPGEILQILNDKL 945
Query: 1656 SEHDMTPEGGCSEAFRDLLSKFLKEKCVANLRNTIRNLEWNGDQHGGEDRRFLEKFCPNI 1477
SEHD + + GCSE F+ LL+ FL+++ + L++T R L + D G F E NI
Sbjct: 946 SEHDASSDDGCSEKFKQLLTYFLEDR-IKLLKSTRRALLLDEDHVGERHSSFEESIAANI 1004
Query: 1476 SGITSRQLEVFLRVCISRYHAKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNV 1297
SGI+ +QL+VFL C+SRYH KK GEPGTQMTLKTFHFAGVASMNV
Sbjct: 1005 SGISVKQLQVFLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNV 1064
Query: 1296 TLGVPRIKEIIDAKKNISTPIITAKLEREYNPKEARIAKARIEKTLLSQVAKSIKIVMSA 1117
TLGVPRIKEII+A K ISTPIITA+L E + ARI K +EK +L +VA++IKIV+ +
Sbjct: 1065 TLGVPRIKEIINAAKKISTPIITAELLSEKDVLSARIVKGSMEKAVLGEVAEAIKIVLKS 1124
Query: 1116 RLASIVITLDLEMIQALRLHVDAYRVKQSILQTKRLKLKEQHVKVLNTRKLEVVPQA-DK 940
++V+ LD++ I+AL + + A V+ SIL ++KLK +HV+V++ KL + P DK
Sbjct: 1125 SQPNLVVKLDMQRIEALHMGISADSVQLSILNHPKIKLKSEHVRVIDKSKLRIYPAGIDK 1184
Query: 939 SKLHFELHTIKNKLPMVVVSGINTVERVIINKEDKEKKMPKYNLFVEGMGLLEVMGTEGV 760
SKL +ELH +K+ LP V+V GI TVER +I+ E E+ +Y L VEG LL VMGT GV
Sbjct: 1185 SKLLYELHHLKSMLPKVIVKGIPTVERAVIS-ETGEENDKRYKLLVEGTNLLAVMGTPGV 1243
Query: 759 EGCETKSNHIMEILRTLGIEAARSSIIDEIRTTMSSHGMTIDIRHMMLLADLMTSKGEVL 580
+ +TKSNHIME+ RTLGIEAAR SIIDEI+ TM SHGM ID RHMMLLADLMT KGE+L
Sbjct: 1244 DAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMKSHGMNIDSRHMMLLADLMTYKGEIL 1303
Query: 579 GITRTGVQKMKDSVLMLASFEKTADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLK 400
GITR G+ KMK SVLMLASFEKTA+HLF+A+ +GRED+IEGVSECIIMGIPMQ+GTG+LK
Sbjct: 1304 GITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPMQLGTGILK 1363
Query: 399 VKQRTLQQEVKLNYALDPIIS 337
V+QR L + Y DPI++
Sbjct: 1364 VRQR-LDHLPEFKYQPDPILA 1383
>ref|XP_006279465.1| hypothetical protein CARUB_v10025743mg [Capsella rubella]
gi|482548169|gb|EOA12363.1| hypothetical protein
CARUB_v10025743mg [Capsella rubella]
Length = 1376
Score = 1689 bits (4374), Expect = 0.0
Identities = 868/1398 (62%), Positives = 1056/1398 (75%), Gaps = 11/1398 (0%)
Frame = -3
Query: 4497 IQFTKQPYIEDVGPRRIESIRFSTFGESEILKGGDVEVYRGVYYDPSKKPIEHGLLDPHM 4318
I++TK+PYIEDVG +I+SI FS + E++K +V+V++ YYDP+ KP E GLLDP M
Sbjct: 7 IEYTKKPYIEDVGSLKIKSINFSMLSDLEVMKAAEVQVWKNSYYDPNCKPFEGGLLDPRM 66
Query: 4317 GPTLKGGLCETCHGTFSQCPGHYGYLTLALPVYHAGYLTNILDILKCICKQCSSVLLAEK 4138
GP K +C TC G F CPGHYGYL L LPVY+ GY ILDILKCICK CS++LL EK
Sbjct: 67 GPPNKKSICTTCEGNFQNCPGHYGYLKLDLPVYNIGYFNFILDILKCICKCCSNMLLDEK 126
Query: 4137 DRLAFLQKMRNPKMEPLGKTQLQKKVVEKCNRLVASGRKATVCPKCGYINGMVKKNTKML 3958
L+KMRNPKMEPL KT+L K VV+KC+ + + ++ C KCGY+NGMVKK +
Sbjct: 127 LYEDHLRKMRNPKMEPLKKTELAKAVVKKCSTMAS--QRIITCKKCGYLNGMVKKIPAQM 184
Query: 3957 GI--IHERSRVNDSSSNEYRSALSHIQEFNASSCSVPDEINPKVVYSLLKNVKDEDCELL 3784
GI H+RS+++ +E+++A+SHI+E + + ++P VV L K + D+DCELL
Sbjct: 185 GIGISHDRSKIHGGEVDEFKAAISHIKESTQAINPLTYVLDPNVVLGLFKGMSDKDCELL 244
Query: 3783 YLSDRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLHQEISDTS 3604
Y++ RPE L+ V GG+QSNEND++ RLK+IIQ NASLH+ +S +
Sbjct: 245 YIAHRPENLIITCMLVPPLSIRPSVMV-GGSQSNENDLSARLKQIIQDNASLHRILSQPT 303
Query: 3603 LPTKSLNAWIDLQVEVAQYINSDVRGIPFSAPTTKPLSGFVQRLKGKQGRFRGNLSGKRV 3424
K++ W +Q EVA+YINS+VRG+ + P +KP+SG +QRLKGKQGRFR NLSGKRV
Sbjct: 304 TSAKNMQVWDTVQSEVAKYINSEVRGVQ-NQPDSKPMSGILQRLKGKQGRFRANLSGKRV 362
Query: 3423 EYTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKFI 3244
EYTGRTVISPDPNLKITEV +PILMARILT+PE VS HNIEKLRQCVRNGPNKYPGA+ +
Sbjct: 363 EYTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKYPGARNV 422
Query: 3243 KQTGADPISLISAARKRYADELKFGDIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMP 3064
+ +L+ RKR ADEL G IVDRHLE+GD VLFNRQPSLHRMSIMCHRARIMP
Sbjct: 423 RYPDGSSRALVGDYRKRIADELAIGCIVDRHLEEGDAVLFNRQPSLHRMSIMCHRARIMP 482
Query: 3063 WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAST 2884
WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNGEILVAST
Sbjct: 483 WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVAST 542
Query: 2883 QDFLTSSFLITRKDTFYDRASFSLICSYMGNGMDQIDLPTPALVKPVELWTGKQLFNILL 2704
QDFLTSSFLITRKDTFYDRA+FSLICSYMG+GMD IDLPTP ++KP+ELWTGKQ+F++LL
Sbjct: 543 QDFLTSSFLITRKDTFYDRAAFSLICSYMGDGMDAIDLPTPTVLKPIELWTGKQIFSVLL 602
Query: 2703 RPHTQMRVFLNLTVAEKNYMKPK----ETMCLNDGFVYFRNSELISGQLGKATLGNGNKD 2536
RP+ +RV++ L V EKN+ K ETMC NDG+VYFRNSELISGQLGKATLGNGNKD
Sbjct: 603 RPNASVRVYVTLNVKEKNFKKGNHGFDETMCTNDGWVYFRNSELISGQLGKATLGNGNKD 662
Query: 2535 GLYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPGKLITEKEKKIRSGY 2356
GLYS+LLRDY SHAAA CMNRLAKLSARWIG HGFSIGIDDVQP +L +++ I+SGY
Sbjct: 663 GLYSILLRDYNSHAAAVCMNRLAKLSARWIGIHGFSIGIDDVQPGEELSRQRKDAIQSGY 722
Query: 2355 EECDNFIDNFNKGQLELQPGHDAALTLEAKITQVLNNIRGETAKVCMDNLQWRNSPLIMS 2176
++C + I+NFN+G L+L+ G D A TLEA IT +LN IR +T K CMD L WRNSPLIMS
Sbjct: 723 DDCHSIIENFNRGNLQLKAGLDGAKTLEAGITGILNTIREDTGKACMDGLHWRNSPLIMS 782
Query: 2175 QCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPKKSKIPLAKGFVANSFYSG 1996
QCGSKGSPINISQMVACVGQQ+V G RAP+GFIDRSLPHFP+ SK P AKGFVANSFYSG
Sbjct: 783 QCGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFVANSFYSG 842
Query: 1995 LTATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDYTVRNASASIIQFF 1816
LTATEFFFHTM GREGLVDTAVKTA TGYMSRRLMKALEDL +HYD TVRNAS I+QF
Sbjct: 843 LTATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQFT 902
Query: 1815 YGDDCMDPSQMEEKSGQPLNFDRLLMKVKATCPADDQIS-LSPLEICERTDERLSEHDMT 1639
YGDD MDP+ ME K G PLNF+RL +K++ATCP + LS E+ ++ +E L HD
Sbjct: 903 YGDDGMDPALMEGKDGAPLNFNRLFLKIQATCPPRSHHNYLSSEELSQKFEEELVRHDKN 962
Query: 1638 PEGGCSEAFRDLLSKFLKEKCVANLRNTIRNLEWNGDQHGGEDRRFLEKFCPNISGITSR 1459
C++AF V +LR+ + L G + SG+T +
Sbjct: 963 RV--CTDAF------------VKSLRDFVSLL--------GVKSASPPQVLYKASGVTDK 1000
Query: 1458 QLEVFLRVCISRYHAKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPR 1279
QLEVF+++C+SRY KK GEPGTQMTLKTFHFAGVASMN+T GVPR
Sbjct: 1001 QLEVFVKICVSRYREKKIEAGTAIGTIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPR 1060
Query: 1278 IKEIIDAKKNISTPIITAKLEREYNPKEARIAKARIEKTLLSQVAKSIKIVMSARLASIV 1099
I EII+A KNISTP+I+A+LE AR K RIEKT L QVA+SI+++M++ AS+
Sbjct: 1061 INEIINASKNISTPVISAELENPLELTSARWVKGRIEKTTLGQVAESIEVLMTSTSASVR 1120
Query: 1098 ITLDLEMIQALRLHVDAYRVKQSILQTKRLKLKEQHVKVLNTRKLEVVPQADKSKLHFEL 919
I LD ++I+ L + + VK SIL+T R+KL + ++VL+T L++ P DKS+ HF L
Sbjct: 1121 IILDNKIIEEACLSISPWSVKNSILKTPRIKLTDNDIRVLDTG-LDITPVVDKSRTHFNL 1179
Query: 918 HTIKNKLPMVVVSGINTVERVIINKE-DKEKKMP---KYNLFVEGMGLLEVMGTEGVEGC 751
H +KN LP ++V+GI TVERV++ ++ DK K++ ++ LFVEG LL VMGT G+ G
Sbjct: 1180 HNLKNVLPSIIVNGIKTVERVVVAEDMDKNKQIDGKKRWKLFVEGTNLLAVMGTPGINGR 1239
Query: 750 ETKSNHIMEILRTLGIEAARSSIIDEIRTTMSSHGMTIDIRHMMLLADLMTSKGEVLGIT 571
T SN+++E+ +TLGIEAAR++IIDEI T M +HGM+IDIRHMMLLAD+MT +GEVLGI
Sbjct: 1240 TTTSNNVVEVSKTLGIEAARTTIIDEIGTVMGNHGMSIDIRHMMLLADVMTYRGEVLGIQ 1299
Query: 570 RTGVQKMKDSVLMLASFEKTADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVKQ 391
RTG+QKM SVLM ASFE+T DHLFSAA++G+ D IEGV+EC+IMGIPM++GTG+LKV Q
Sbjct: 1300 RTGIQKMDKSVLMQASFERTGDHLFSAAISGKVDNIEGVTECVIMGIPMKLGTGILKVLQ 1359
Query: 390 RTLQQEVKLNYALDPIIS 337
RT KL Y DPIIS
Sbjct: 1360 RT-DDLPKLKYGADPIIS 1376
>ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutrema salsugineum]
gi|557101978|gb|ESQ42341.1| hypothetical protein
EUTSA_v10012446mg [Eutrema salsugineum]
Length = 1375
Score = 1688 bits (4372), Expect = 0.0
Identities = 871/1397 (62%), Positives = 1057/1397 (75%), Gaps = 10/1397 (0%)
Frame = -3
Query: 4497 IQFTKQPYIEDVGPRRIESIRFSTFGESEILKGGDVEVYRGVYYDPSKKPIEHGLLDPHM 4318
I+FTKQPYIEDVGP +I+SI FS F + EI+K +V+V+R YY+ + KP+E GLLDP M
Sbjct: 7 IEFTKQPYIEDVGPLKIKSINFSIFSDLEIMKAAEVQVWRNNYYESNFKPVEGGLLDPRM 66
Query: 4317 GPTLKGGLCETCHGTFSQCPGHYGYLTLALPVYHAGYLTNILDILKCICKQCSSVLLAEK 4138
GP K +C TCH F CPGH+GYL L LPVY+ G+L ILDILKCICK+CS++L+ EK
Sbjct: 67 GPPNKKSICATCHADFQNCPGHFGYLKLDLPVYNVGFLNYILDILKCICKRCSNILIDEK 126
Query: 4137 DRLAFLQKMRNPKMEPLGKTQLQKKVVEKCNRLVASGRKATVCPKCGYINGMVKKNTKML 3958
L+KMRNPKMEPL KT+L K VV+KC+ ++AS R T C CGY+NGMVKK +
Sbjct: 127 LYEDHLKKMRNPKMEPLKKTELAKAVVKKCS-MMASQRIIT-CKNCGYLNGMVKKVAAQM 184
Query: 3957 GII---HERSRVNDSSSNEYRSALSHIQEFNASSCSVPDEINPKVVYSLLKNVKDEDCEL 3787
GII H+RS+++ +E++SA+SH +E + + ++P +V L K + D+DCEL
Sbjct: 185 GIIGISHDRSKIHGGEVDEFKSAISHTRESTGAINPLTYVLDPNLVLGLFKGMSDKDCEL 244
Query: 3786 LYLSDRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLHQEISDT 3607
LY++ RPE L + GGTQSNEND+TER+K+I+Q NAS + ++
Sbjct: 245 LYIAHRPENLFIICMFVPPLPTRPSVRI-GGTQSNENDLTERVKKILQDNASCKKILNQA 303
Query: 3606 SLPTKSLNAWIDLQVEVAQYINSDVRGIPFSAPTTKPLSGFVQRLKGKQGRFRGNLSGKR 3427
+ K++ W +Q EVAQYINS+VRGIP + P +KPLSG +QRLKGKQGRFR NLSGKR
Sbjct: 304 TTSPKNMQVWDTVQSEVAQYINSEVRGIP-NQPDSKPLSGILQRLKGKQGRFRANLSGKR 362
Query: 3426 VEYTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKF 3247
VEYTGRTVISPDPNLKITEV +PILMARILT+PE VS HNIEKLRQCVRNGPNKYPGA+
Sbjct: 363 VEYTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKYPGARS 422
Query: 3246 IKQTGADPISLISAARKRYADELKFGDIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIM 3067
++ +L+ RKR ADEL G IVDRHLE+GD VLFNRQPSLHRMSIMCHRARIM
Sbjct: 423 VRYPDGSSRTLVGDYRKRIADELTIGCIVDRHLEEGDAVLFNRQPSLHRMSIMCHRARIM 482
Query: 3066 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 2887
PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNGEILVAS
Sbjct: 483 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVAS 542
Query: 2886 TQDFLTSSFLITRKDTFYDRASFSLICSYMGNGMDQIDLPTPALVKPVELWTGKQLFNIL 2707
TQDFLTSS+LITRKDTFYDRA+FSLICSYMG+ MD IDLPTP ++KP+ELWTGKQ+F++L
Sbjct: 543 TQDFLTSSYLITRKDTFYDRAAFSLICSYMGDAMDAIDLPTPTILKPIELWTGKQVFSVL 602
Query: 2706 LRPHTQMRVFLNLTVAEKNYMKPK--ETMCLNDGFVYFRNSELISGQLGKATLGNGNKDG 2533
LRP+ +RV++ L V EKN+ K K ETMC NDG+VYFRNSELISGQLGKATLGNGNKDG
Sbjct: 603 LRPNASVRVYVTLNVKEKNFKKGKYDETMCTNDGWVYFRNSELISGQLGKATLGNGNKDG 662
Query: 2532 LYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPGKLITEKEKKIRSGYE 2353
LYSVLLRDY SHAAA CMNRLAKLSARWIG HGFS+GIDDVQP +L E+EK I GYE
Sbjct: 663 LYSVLLRDYNSHAAAVCMNRLAKLSARWIGIHGFSLGIDDVQPGEELREEREKIINKGYE 722
Query: 2352 ECDNFIDNFNKGQLELQPGHDAALTLEAKITQVLNNIRGETAKVCMDNLQWRNSPLIMSQ 2173
+C I +FN+G+L+L+ G D A +LE+ IT +LN IR T K+CM+ L WRNSPLIMSQ
Sbjct: 723 DCGLKIRDFNEGRLQLKAGLDTAKSLESDITGILNRIREATGKLCMEGLHWRNSPLIMSQ 782
Query: 2172 CGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPKKSKIPLAKGFVANSFYSGL 1993
CGSKGSPINISQMVACVGQQ+V G RAP+GFIDRSLPHFP+ SK P AKGFVANSFYSGL
Sbjct: 783 CGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKTPEAKGFVANSFYSGL 842
Query: 1992 TATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDYTVRNASASIIQFFY 1813
TATEFFFHTM GREGLVDTAVKTA TGYMSRRLMKALEDL +HYD TVRNAS I+QF Y
Sbjct: 843 TATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQFTY 902
Query: 1812 GDDCMDPSQMEEKSGQPLNFDRLLMKVKATCPADDQIS-LSPLEICERTDERLSEHDMTP 1636
GDD MDP ME K G PLNFDRL +K++ATCP S LS E+ ++ +E L HD +
Sbjct: 903 GDDGMDPVLMEGKDGAPLNFDRLFLKIQATCPPRSHHSFLSSEELLQKFEEELVRHDTSR 962
Query: 1635 EGGCSEAFRDLLSKFLKEKCVANLRNTIRNLEWNGDQHGGEDRRFLEKFCPNISGITSRQ 1456
C++AF L +FL + LR+T + + SG+T +Q
Sbjct: 963 V--CTDAFVKSLREFLS---LLGLRSTSPS-----------------QVFYKASGVTDKQ 1000
Query: 1455 LEVFLRVCISRYHAKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRI 1276
+EVF+++C+SRY K GEPGTQMTLKTFHFAGVASMN+T GVPRI
Sbjct: 1001 IEVFVKICVSRYREKTIEAGTAIGTIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRI 1060
Query: 1275 KEIIDAKKNISTPIITAKLEREYNPKEARIAKARIEKTLLSQVAKSIKIVMSARLASIVI 1096
EII+A KNISTP+I+A+LE AR K RIEKT L QVA+SI+++M++ AS+ I
Sbjct: 1061 NEIINASKNISTPVISAELENPLELTSARWVKGRIEKTTLGQVAESIEVLMTSTSASVRI 1120
Query: 1095 TLDLEMIQALRLHVDAYRVKQSILQTKRLKLKEQHVKVLNTRKLEVVPQADKSKLHFELH 916
LD + I+ L + + VK SIL+T R+KL + ++++L++ L++ P DKS +HF LH
Sbjct: 1121 ILDNKRIEEACLSISPWSVKTSILKTPRIKLNDDNIRILDS-GLDITPVGDKSGIHFGLH 1179
Query: 915 TIKNKLPMVVVSGINTVERVIINKEDKEKKM----PKYNLFVEGMGLLEVMGTEGVEGCE 748
+KN LP ++V+GI TVERV++ ++ +KK ++ LFVEG LL VMGT G+ G
Sbjct: 1180 NLKNVLPNIIVNGIKTVERVVVAEDTDKKKQIDGKKRWKLFVEGTNLLAVMGTPGINGRT 1239
Query: 747 TKSNHIMEILRTLGIEAARSSIIDEIRTTMSSHGMTIDIRHMMLLADLMTSKGEVLGITR 568
T SN+I+E+ +TLGIEAAR++IIDEI + M +HGM+IDIRHMMLLAD+MT +GEVLGI R
Sbjct: 1240 TTSNNIVEVSKTLGIEAARTTIIDEIGSVMGNHGMSIDIRHMMLLADVMTYRGEVLGIQR 1299
Query: 567 TGVQKMKDSVLMLASFEKTADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVKQR 388
TG+QKM SVLM ASFE+T DHLFSAAV+G+ D IEGV+EC+IMGIPM++GTG+LKV QR
Sbjct: 1300 TGIQKMDKSVLMQASFERTGDHLFSAAVSGKVDNIEGVTECVIMGIPMKLGTGILKVLQR 1359
Query: 387 TLQQEVKLNYALDPIIS 337
T KL Y DPIIS
Sbjct: 1360 T-DDLPKLKYGADPIIS 1375
>ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arabidopsis lyrata subsp.
lyrata] gi|297310500|gb|EFH40924.1| hypothetical protein
ARALYDRAFT_496142 [Arabidopsis lyrata subsp. lyrata]
Length = 1376
Score = 1679 bits (4347), Expect = 0.0
Identities = 865/1398 (61%), Positives = 1050/1398 (75%), Gaps = 11/1398 (0%)
Frame = -3
Query: 4497 IQFTKQPYIEDVGPRRIESIRFSTFGESEILKGGDVEVYRGVYYDPSKKPIEHGLLDPHM 4318
I+FTKQPYIEDVGP +I+SI FS + E++K +V+V++ YY+ + KP E+GLLD M
Sbjct: 7 IEFTKQPYIEDVGPLKIKSINFSVLSDLEVMKAAEVQVWKNNYYETNLKPYENGLLDARM 66
Query: 4317 GPTLKGGLCETCHGTFSQCPGHYGYLTLALPVYHAGYLTNILDILKCICKQCSSVLLAEK 4138
GP K +C TC G F CPGHYGYL L LPVY+ G+ ILDILKCICK+CS++LL EK
Sbjct: 67 GPPNKKSICTTCDGNFQNCPGHYGYLKLDLPVYNVGFFNFILDILKCICKRCSNMLLDEK 126
Query: 4137 DRLAFLQKMRNPKMEPLGKTQLQKKVVEKCNRLVASGRKATVCPKCGYINGMVKKNTKML 3958
L+KMRNPKMEPL KT+L K VV+KC+ + + ++ C KCGY+NGMVKK +
Sbjct: 127 LYEDHLRKMRNPKMEPLKKTELAKAVVKKCSTMAS--QRIITCKKCGYLNGMVKKIAAQM 184
Query: 3957 GI--IHERSRVNDSSSNEYRSALSHIQEFNASSCSVPDEINPKVVYSLLKNVKDEDCELL 3784
GI H+RS+++ +E +SA+SH +E + + ++P +V L K + D+DCELL
Sbjct: 185 GIGISHDRSKIHGGEVDECKSAISHTKESTRAINPLTYVLDPNLVLGLFKGMSDKDCELL 244
Query: 3783 YLSDRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLHQEISDTS 3604
Y++ RPE L+ + GGT+SNENDITERLK IIQ NA LH+ +S +
Sbjct: 245 YIAHRPENLITTCMLVPPLSIRPSVMI-GGTRSNENDITERLKLIIQNNACLHRILSQPT 303
Query: 3603 LPTKSLNAWIDLQVEVAQYINSDVRGIPFSAPTTKPLSGFVQRLKGKQGRFRGNLSGKRV 3424
K++ W +Q EVA+YINS+VRG+ + P PLSG +QRLKGKQGRFR NLSGKRV
Sbjct: 304 TSPKNMQVWDTVQSEVAKYINSEVRGVQ-NQPEKTPLSGLLQRLKGKQGRFRANLSGKRV 362
Query: 3423 EYTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKFI 3244
EYTGRTVISPDPNLKITEV +PILMARILT+PE VS HNIEKLRQCVRNGPNKYPGA+ +
Sbjct: 363 EYTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKYPGARNV 422
Query: 3243 KQTGADPISLISAARKRYADELKFGDIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMP 3064
+ +L+ RKR ADEL G IVDRHLE+GD VLFNRQPSLHRMSIMCHRARIMP
Sbjct: 423 RYPDGSSRTLVGDYRKRIADELTIGCIVDRHLEEGDAVLFNRQPSLHRMSIMCHRARIMP 482
Query: 3063 WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAST 2884
WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNGEILVAST
Sbjct: 483 WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVAST 542
Query: 2883 QDFLTSSFLITRKDTFYDRASFSLICSYMGNGMDQIDLPTPALVKPVELWTGKQLFNILL 2704
QDFLT+SFLITRKDTFYDRA+FSLICSYMG+GMD IDLPTP ++KP+ELWTGKQLF++LL
Sbjct: 543 QDFLTTSFLITRKDTFYDRAAFSLICSYMGDGMDAIDLPTPTILKPIELWTGKQLFSVLL 602
Query: 2703 RPHTQMRVFLNLTVAEKNYMKPK----ETMCLNDGFVYFRNSELISGQLGKATLGNGNKD 2536
RP+ +RV++ L V EKN+ K + ETMC+NDG+VYFRNSELISGQLGKATLGNGNKD
Sbjct: 603 RPNASVRVYVTLNVKEKNFKKGEHGFDETMCVNDGWVYFRNSELISGQLGKATLGNGNKD 662
Query: 2535 GLYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPGKLITEKEKKIRSGY 2356
GLYS+LLRDY SHAAA CMNRLAKLSARWIG HGFSIGIDDVQP +L E++ I+ GY
Sbjct: 663 GLYSILLRDYNSHAAAVCMNRLAKLSARWIGIHGFSIGIDDVQPGEELNKERKDSIQFGY 722
Query: 2355 EECDNFIDNFNKGQLELQPGHDAALTLEAKITQVLNNIRGETAKVCMDNLQWRNSPLIMS 2176
++C I+ FN+G L+L+ G D A +LEA+IT +LN IR T K CM L WRNSPLIMS
Sbjct: 723 DQCHRKIEEFNRGNLQLKAGLDGAKSLEAEITGILNTIREATGKACMSGLHWRNSPLIMS 782
Query: 2175 QCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPKKSKIPLAKGFVANSFYSG 1996
QCGSKGSPINISQMVACVGQQ+V G RAP+GFIDRSLPHFP+ SK P AKGFVANSFYSG
Sbjct: 783 QCGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFVANSFYSG 842
Query: 1995 LTATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDYTVRNASASIIQFF 1816
LTATEFFFHTM GREGLVDTAVKTA TGYMSRRLMKALEDL +HYD TVRNAS I+QF
Sbjct: 843 LTATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQFT 902
Query: 1815 YGDDCMDPSQMEEKSGQPLNFDRLLMKVKATCPADDQIS-LSPLEICERTDERLSEHDMT 1639
YGDD MDP+ ME K G PLNFDRL +K++ATCP + LS E+ ++ +E L HD +
Sbjct: 903 YGDDGMDPALMEGKDGAPLNFDRLFLKIQATCPPRSHHNYLSSEELSQKFEEELVRHDKS 962
Query: 1638 PEGGCSEAFRDLLSKFLKEKCVANLRNTIRNLEWNGDQHGGEDRRFLEKFCPNISGITSR 1459
C++AF V +LR + L G + SG+T +
Sbjct: 963 RV--CTDAF------------VKSLREFVSLL--------GVKSASTPQVLYKASGVTDK 1000
Query: 1458 QLEVFLRVCISRYHAKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPR 1279
QLEVF+++C+SRY KK GEPGTQMTLKTFHFAGVASMN+T GVPR
Sbjct: 1001 QLEVFVKICVSRYREKKIEAGTAIGTIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPR 1060
Query: 1278 IKEIIDAKKNISTPIITAKLEREYNPKEARIAKARIEKTLLSQVAKSIKIVMSARLASIV 1099
I EII+A KNISTP+I+A+LE AR K RIEKT L QVA+SI+++M++ AS+
Sbjct: 1061 INEIINASKNISTPVISAELENPLELTSARWVKGRIEKTTLGQVAESIEVLMTSTSASVR 1120
Query: 1098 ITLDLEMIQALRLHVDAYRVKQSILQTKRLKLKEQHVKVLNTRKLEVVPQADKSKLHFEL 919
I LD ++I+ L + + VK SIL+T R+KL + ++VL+T L++ P DKS+ HF L
Sbjct: 1121 IILDNKIIEEACLSISPWSVKNSILKTPRIKLNDNDIRVLDTG-LDITPVVDKSRTHFNL 1179
Query: 918 HTIKNKLPMVVVSGINTVERVIINKE-DKEKKMP---KYNLFVEGMGLLEVMGTEGVEGC 751
H +KN LP ++V+GI TVERV++ ++ DK K++ ++ LFVEG LL VMGT G+ G
Sbjct: 1180 HNLKNVLPNIIVNGIKTVERVVVAEDMDKNKQIDGKTRWKLFVEGTNLLAVMGTPGINGR 1239
Query: 750 ETKSNHIMEILRTLGIEAARSSIIDEIRTTMSSHGMTIDIRHMMLLADLMTSKGEVLGIT 571
T SN+++E+ +TLGIEAAR++IIDEI T M +HGM+IDIRHMMLLAD+MT +GEVLGI
Sbjct: 1240 TTTSNNVVEVSKTLGIEAARTTIIDEIGTVMGNHGMSIDIRHMMLLADVMTYRGEVLGIQ 1299
Query: 570 RTGVQKMKDSVLMLASFEKTADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLKVKQ 391
RTG+QKM SVLM ASFE+T DHLFSAA++G+ D IEGV+EC+IMGIPM++GTG+LKV Q
Sbjct: 1300 RTGIQKMDKSVLMQASFERTGDHLFSAAISGKVDNIEGVTECVIMGIPMKLGTGILKVLQ 1359
Query: 390 RTLQQEVKLNYALDPIIS 337
RT KL Y DPIIS
Sbjct: 1360 RT-DDLPKLKYGADPIIS 1376
>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
brachyantha]
Length = 1389
Score = 1677 bits (4344), Expect = 0.0
Identities = 869/1412 (61%), Positives = 1051/1412 (74%), Gaps = 18/1412 (1%)
Frame = -3
Query: 4518 MRRAQATIQFTKQPYIEDVGPRRIESIRFSTFGESEILKGGDVEVYRGVYYDPSKKPIEH 4339
M R + ++ TK+P+IED G RRI+SIRFS F +E+ + +V+V+ Y+ +P+ +
Sbjct: 1 MARPEEKLRCTKEPFIEDAGTRRIKSIRFSMFSGNEVRQSAEVQVWNSRIYNQEMRPVPN 60
Query: 4338 GLLDPHMGPTLKGGLCETCHGTFSQCPGHYGYLTLALPVYHAGYLTNILDILKCICKQCS 4159
GLLD MG K G C TCHG+F++CPGH+GYL LALPV++ G+ ILD+LKCICK CS
Sbjct: 61 GLLDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKGCS 120
Query: 4158 SVLLAEKDRLAFLQKMRNPKMEPLGKTQLQKKVVEKCNRLVASGRKATVCPKCGYINGMV 3979
VLL EKDRL FL+KMRNPK +PL K+ + KKV +KC K + CP CG+ING+
Sbjct: 121 RVLLVEKDRLEFLKKMRNPKADPLQKSAIMKKVRDKC--------KLSRCPWCGFINGVA 172
Query: 3978 KKNTKMLGIIHERSRVNDSSSNEYRSALSHIQEFNASSCSVPDEINPKVVYSLLKNVKDE 3799
KK L I+H+ S+ D S+ E + ALSH +E S S ++P V SL K + DE
Sbjct: 173 KKGRAGLIILHDCSKTLDGSTEELKEALSHKKE--KLSFSAVHMLDPATVLSLFKRMTDE 230
Query: 3798 DCELLYLSDRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLHQE 3619
DCELL L DRPEKL+ V GG SNE+ IT LK I N+ L +
Sbjct: 231 DCELLNLGDRPEKLIVTEIAVPPVPIRPSVFVAGGRMSNEDSITVILKSIANTNSILKEN 290
Query: 3618 ISDTSLPTKSLNAWIDLQVEVAQYINSDVRGIPFSAPTTKPLSGFVQRLKGKQGRFRGNL 3439
+ K + W LQ++V +YINSD +P S G VQRLKGK GRFRGNL
Sbjct: 291 LQTGGQFMKCFDCWQHLQLQVVEYINSDAPSLPESQHR-----GLVQRLKGKTGRFRGNL 345
Query: 3438 SGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQCVRNGPNKYP 3259
SGKR EYTGRTVISPDPNL+ITEVA+PILMAR+LTYPERVS++NIEKLRQC+RNGP+K+P
Sbjct: 346 SGKRTEYTGRTVISPDPNLRITEVAIPILMARVLTYPERVSYYNIEKLRQCIRNGPHKHP 405
Query: 3258 GAKFIKQTGADPISLISAARKRYADELKFGDIVDRHLEDGDVVLFNRQPSLHRMSIMCHR 3079
GA FI QT + L R+ A +LK+G +V+RHLEDGD+VLFNRQPSLHRMSIM HR
Sbjct: 406 GANFIIQTDGTKLHLKYCDRRIAARDLKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHR 465
Query: 3078 ARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEI 2899
ARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALMLMGVQNNLCTPKNGEI
Sbjct: 466 ARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEI 525
Query: 2898 LVASTQDFLTSSFLITRKDTFYDRASFSLICSYMGNGMDQIDLPTPALVKPVELWTGKQL 2719
LVASTQDFLTSSFL+TRKD FYDR+SF+L+CSY+G+ M+ IDLPTPALVKP+ELWTGKQL
Sbjct: 526 LVASTQDFLTSSFLVTRKDNFYDRSSFTLLCSYLGDAMENIDLPTPALVKPIELWTGKQL 585
Query: 2718 FNILLRPHTQMRVFLNLTVAEKNYMKPKETMCLNDGFVYFRNSELISGQLGKATLGNGNK 2539
F++L+RP+ +VFLNLTV EK Y K +ETMC NDGFVYFRNSEL+SGQ+GK TLGNGNK
Sbjct: 586 FSVLVRPNACTKVFLNLTVKEKIYSKSRETMCPNDGFVYFRNSELLSGQVGKKTLGNGNK 645
Query: 2538 DGLYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPGKLITEKEKKIRSG 2359
DG++S+L+RDY SHAAA+CMNRLAK SAR+IGNHGFSIG+DDV+P L +K+KKI G
Sbjct: 646 DGMFSILVRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVRPGEHLDQQKKKKIDEG 705
Query: 2358 YEECDNFIDNFNKGQLELQPGHDAALTLEAKITQVLNNIRGETAKVCMDNLQWRNSPLIM 2179
Y+EC + I +F+KG L LQPG +AA TLE KIT VLN IR +CMD L WRNSPLIM
Sbjct: 706 YKECHDLITSFSKGALTLQPGCNAAQTLEHKITHVLNKIREAAGNICMDTLHWRNSPLIM 765
Query: 2178 SQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPKKSKIPLAKGFVANSFYS 1999
SQCGSKGSPINISQMV CVGQQSVGG RAPNGFIDR+LPHFP SK P AKGFVANSFY+
Sbjct: 766 SQCGSKGSPINISQMVVCVGQQSVGGHRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYN 825
Query: 1998 GLT-----------------ATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLS 1870
GLT ATEFFFHTM GREGLVDTAVKTA+TGYMSRRLMK LEDLS
Sbjct: 826 GLTATEFFFHTMGGIYIVLPATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLS 885
Query: 1869 IHYDYTVRNASASIIQFFYGDDCMDPSQMEEKSGQPLNFDRLLMKVKATCPADDQISLSP 1690
+ YD TVRNAS I+QF YGDD MDP++ME + G+PLN D+L MKV ATCP Q +LSP
Sbjct: 886 VFYDQTVRNASGGIVQFLYGDDGMDPAKMEGEDGKPLNLDQLFMKVMATCPQRGQNTLSP 945
Query: 1689 LEICERTDERLSEHDMTPEGGCSEAFRDLLSKFLKEKCVANLRNTIRNLEWNGDQHGGED 1510
EI + +++LSEHD + + GCSE F+ LL FL+++ + L++T R L + + H G+D
Sbjct: 946 GEILQILNDKLSEHDASSDDGCSEKFKQLLKDFLEDR-IKLLKSTRRALCLD-ENHVGKD 1003
Query: 1509 RRFLEKFCPNISGITSRQLEVFLRVCISRYHAKKXXXXXXXXXXXXXXXGEPGTQMTLKT 1330
E NISGI+++QL+VFL C+SRYH+KK GEPGTQMTLKT
Sbjct: 1004 SSIEESIAANISGISAKQLQVFLDTCLSRYHSKKIEAGASIGAIGAQSIGEPGTQMTLKT 1063
Query: 1329 FHFAGVASMNVTLGVPRIKEIIDAKKNISTPIITAKLEREYNPKEARIAKARIEKTLLSQ 1150
FHFAGVASMNVTLGVPRIKEII+A K ISTPIITA+L + AR+ K +EK +L +
Sbjct: 1064 FHFAGVASMNVTLGVPRIKEIINAAKKISTPIITAELLSGKDVLSARVVKGSMEKAVLGE 1123
Query: 1149 VAKSIKIVMSARLASIVITLDLEMIQALRLHVDAYRVKQSILQTKRLKLKEQHVKVLNTR 970
VA+ IKIV+ + ++V+ LD++ I+ L + + A V+ SIL R+KLK +HV+V++
Sbjct: 1124 VAEDIKIVLKSSQPNLVVKLDMQRIEDLHMGISADSVQLSILNHPRIKLKSEHVRVIDKA 1183
Query: 969 KLEVVPQA-DKSKLHFELHTIKNKLPMVVVSGINTVERVIINKEDKEKKMPKYNLFVEGM 793
KL V P A DKSKL +ELH +K+ LP V+V GI TVER +I++ KY+L VEG
Sbjct: 1184 KLRVYPTAIDKSKLLYELHNLKSMLPKVIVKGIPTVERAVISQTG-----DKYSLLVEGT 1238
Query: 792 GLLEVMGTEGVEGCETKSNHIMEILRTLGIEAARSSIIDEIRTTMSSHGMTIDIRHMMLL 613
LL VMGT GV+ +TKSNHIME+ RTLGIEAAR SIIDEI+ TM+SHGM ID RHMMLL
Sbjct: 1239 NLLAVMGTPGVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMTSHGMNIDSRHMMLL 1298
Query: 612 ADLMTSKGEVLGITRTGVQKMKDSVLMLASFEKTADHLFSAAVNGREDKIEGVSECIIMG 433
ADLMT KGE+LGITR G+ KMK SVLMLASFEKTA+HLF+A+ +GRED+IEGVSECIIMG
Sbjct: 1299 ADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMG 1358
Query: 432 IPMQMGTGMLKVKQRTLQQEVKLNYALDPIIS 337
IPMQ+GTG+LKV+QR L + Y DPI++
Sbjct: 1359 IPMQLGTGILKVRQR-LDHLPEFKYQPDPILA 1389
>ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda]
gi|548832896|gb|ERM95665.1| hypothetical protein
AMTR_s00023p00196820 [Amborella trichopoda]
Length = 1383
Score = 1670 bits (4324), Expect = 0.0
Identities = 861/1400 (61%), Positives = 1046/1400 (74%), Gaps = 7/1400 (0%)
Frame = -3
Query: 4518 MRRAQATIQFTKQPYIEDVGPRRIESIRFSTFGESEILKGGDVEVYRGVYYDPSK-KPIE 4342
M + FTK+P++ED+GPR+I+S++F EI+K + +VY+ YY+ + KP E
Sbjct: 1 MDSEKEAFNFTKKPFVEDIGPRKIKSVQFCMLSGPEIVKAAETQVYKRDYYNRTDLKPAE 60
Query: 4341 HGLLDPHMGPTLKGGLCETCHGTFSQCPGHYGYLTLALPVYHAGYLTNILDILKCICKQC 4162
HG+LD MG + K G C TC G F CPGH+GYL LALPV+H GY + +L+CICK C
Sbjct: 61 HGVLDTRMGFSTKSGSCATCFGDFQTCPGHFGYLKLALPVFHVGYFRTTIIVLQCICKSC 120
Query: 4161 SSVLLAEKDRLAFLQKMRNPKMEPLGKTQLQKKVVEKCNRLVASGRKATVCPKCGYINGM 3982
+ +LL E++R FL+K+RNP+ E K KKV++KC R+ +CP+CG NG+
Sbjct: 121 ARILLFEEERKQFLKKIRNPRAELHQKNDFVKKVIDKCKRV-------RICPRCGDYNGV 173
Query: 3981 VKKNTKMLGIIHERSRVN-DSSSNEYRSALSHIQEFNASSCSVPDEINPKVVYSLLKNVK 3805
VKK I H+RS+ N D + E ++A+S + N S ++ + + P+ +L + +
Sbjct: 174 VKKAGPTFRISHDRSKANYDKLTKECKTAISQTKYSN-SDFNMVENLTPQRALALFERMV 232
Query: 3804 DEDCELLYLSDRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLH 3625
DEDC+LLYL DRPEKL+ G++ NEN++T +L I+Q N +L
Sbjct: 233 DEDCDLLYLYDRPEKLIITHIAVPPAGIRPTY--QSGSRLNENELTTKLWEIVQINHTLI 290
Query: 3624 QEISDTSLPTKSLNAWIDLQVEVAQYINSDVRGIPFSAPTTKPLSGFVQRLKGKQGRFRG 3445
++ +LP ++ W+ LQV VA YINS++ +P + +K G VQRLKGKQGRFR
Sbjct: 291 DHVNKGNLPQYYMDTWVLLQVRVALYINSELPSLPLNYQPSKFEGGLVQRLKGKQGRFRS 350
Query: 3444 NLSGKRVEYTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQCVRNGPNK 3265
NL GKRV++TGRTVISPDPNLKITEVA+P LMA+ILTY ERV+ HNIEKLRQCVRNGP K
Sbjct: 351 NLEGKRVDFTGRTVISPDPNLKITEVAIPRLMAQILTYKERVTIHNIEKLRQCVRNGPVK 410
Query: 3264 YPGAKFIKQTGADPISLISAARKRYADELKFGDIVDRHLEDGDVVLFNRQPSLHRMSIMC 3085
YPGA F+ +G D +SL +KR ADELKFGD V+RHLEDG++VLFNRQPSLHRMSIMC
Sbjct: 411 YPGANFVI-SGGDTLSLRYGNKKRKADELKFGDFVERHLEDGEIVLFNRQPSLHRMSIMC 469
Query: 3084 HRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNG 2905
HRAR+MPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALMLMGVQ+NLCTPKNG
Sbjct: 470 HRARVMPWRTLRFNESVCNPYNADFDGDEMNIHVPQTEEARTEALMLMGVQHNLCTPKNG 529
Query: 2904 EILVASTQDFLTSSFLITRKDTFYDRASFSLICSYMGNGMDQIDLPTPALVKPVELWTGK 2725
EILVASTQDFLTSS+LITRKDTFYDRA+FSL+CSYMG+GM+ IDLPTPAL+KPVELWTGK
Sbjct: 530 EILVASTQDFLTSSYLITRKDTFYDRATFSLMCSYMGDGMENIDLPTPALLKPVELWTGK 589
Query: 2724 QLFNILLRPHTQMRVFLNLTVAEKNYMKPKETMCLNDGFVYFRNSELISGQLGKATLGNG 2545
QLF++L+RPH M+V++NL++ EKNY K ETMC NDGFVY RNSELISGQLGKATLGNG
Sbjct: 590 QLFSVLIRPHAHMKVYVNLSLMEKNYSKGGETMCANDGFVYIRNSELISGQLGKATLGNG 649
Query: 2544 NKDGLYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPGKLITEKEKKIR 2365
NKDGL+SVLLRDY SHAAA+CMNRLAKLSARWIGNHGFSIGIDDV P L +KE++I+
Sbjct: 650 NKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNHGFSIGIDDVLPGSHLTKQKEEQIK 709
Query: 2364 SGYEECDNFIDNFNKGQLELQPGHDAALTLEAKITQVLNNIRGETAKVCMDNLQWRNSPL 2185
GY CD FID ++KG+L L+PG +AA TLEA+IT+VLN IR AKVCM+ L WRNSPL
Sbjct: 710 GGYSNCDAFIDAYDKGKLSLKPGCNAAQTLEAEITRVLNGIRDAAAKVCMEELHWRNSPL 769
Query: 2184 IMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPKKSKIPLAKGFVANSF 2005
IMSQCGSKGSPINISQM+ACVGQQSVGGRRAPNGFIDRSLPHFP+ K P AKGFVANSF
Sbjct: 770 IMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKTPAAKGFVANSF 829
Query: 2004 YSGLTATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIHYDYTVRNASASII 1825
Y+GLTA EFFFHTM GREGLVDTAVKTADTGY+SRRL+K+LEDLS HYD TVRN+S +II
Sbjct: 830 YTGLTAAEFFFHTMGGREGLVDTAVKTADTGYLSRRLIKSLEDLSTHYDDTVRNSSGTII 889
Query: 1824 QFFYGDDCMDPSQMEEKSGQPLNFDRLLMKVKATCPADDQISLSPLEICERTDERLSEHD 1645
QF YGDD MDP++ME KSG PLN DRL MK+KATCPA SLSP EI ++RLS+HD
Sbjct: 890 QFSYGDDGMDPAKMEGKSGVPLNLDRLFMKIKATCPASVSASLSPSEISTIVNDRLSKHD 949
Query: 1644 MTPEGGCSEAFRDLLSKFLKEKCVANLRNTIRNLEWNGDQHGGEDRRFLEKFCPNISGIT 1465
MTPE GCS AF++ LS F+K++ A ++ T L + D E LE NISGI+
Sbjct: 950 MTPERGCSMAFKEELSNFIKKRMDA-IKKTRNMLGLDEDCVDKEKFSGLEHVAANISGIS 1008
Query: 1464 SRQLEVFLRVCISRYHAKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGV 1285
+QL VFL CISRYH K+ GEPGTQMTLKTFHFAGVASMN+TLGV
Sbjct: 1009 RQQLRVFLETCISRYHLKRIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITLGV 1068
Query: 1284 PRIKEIIDAKKNISTPIITAKLEREYNPKEARIAKARIEKTLLSQVAKSIKIVMSARLAS 1105
PRIKEI+ A K ISTPIITA L + + K ARI K RIEKTLL +VAK++KI ++ AS
Sbjct: 1069 PRIKEILGASKKISTPIITATLVCDNDEKSARIVKGRIEKTLLGEVAKTVKISVTPTQAS 1128
Query: 1104 IVITLDLEMIQALRLHVDAYRVKQSILQTKRLKLKEQHVKVLNTRKLE-----VVPQADK 940
I ITLD++ I+AL++ +DA V SI + + K+ +KV T L ++P+ +
Sbjct: 1129 INITLDMKRIEALQMAIDAKTVADSISENLKAKVSRTKLKVKPTFTLPDKLKILLPEIGR 1188
Query: 939 SKLHFELHTIKNKLPMVVVSGINTVERVIINKEDKEKKMPKYNLFVEGMGLLEVMGTEGV 760
++ + LH +++ LP ++V GI TVER +IN K NL VEG LL VMGT GV
Sbjct: 1189 KEVLYSLHLLQSLLPKIIVKGIPTVERAVIN-----NVKGKLNLLVEGTNLLAVMGTPGV 1243
Query: 759 EGCETKSNHIMEILRTLGIEAARSSIIDEIRTTMSSHGMTIDIRHMMLLADLMTSKGEVL 580
+G T SNHI+E+ TLGIEAAR SIIDEI+ TM SHGM+ID+RHMMLLADLMT +G VL
Sbjct: 1244 DGRNTTSNHIVEVEGTLGIEAARKSIIDEIQYTMKSHGMSIDLRHMMLLADLMTFRGLVL 1303
Query: 579 GITRTGVQKMKDSVLMLASFEKTADHLFSAAVNGREDKIEGVSECIIMGIPMQMGTGMLK 400
GI R G+ KMK+SVLMLASFE+TAD LF A GR D I GVSECIIMG+PMQ+GTG+L
Sbjct: 1304 GIQRFGITKMKESVLMLASFERTADILFDATTRGRVDTIAGVSECIIMGVPMQIGTGILS 1363
Query: 399 VKQRTLQQEVKLNYALDPII 340
V+QR +Q KL Y DPII
Sbjct: 1364 VQQRP-EQLAKLTYGPDPII 1382