BLASTX nr result
ID: Rauwolfia21_contig00005145
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00005145
(2237 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006352367.1| PREDICTED: transcription initiation factor I... 534 e-149
ref|XP_006352364.1| PREDICTED: transcription initiation factor I... 534 e-149
ref|XP_004250258.1| PREDICTED: transcription initiation factor I... 526 e-146
ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|... 525 e-146
ref|XP_002322538.2| transcription initiation factor IIF alpha su... 516 e-143
ref|XP_002308775.1| transcription initiation factor IIF alpha su... 510 e-141
ref|XP_006467340.1| PREDICTED: transcription initiation factor I... 507 e-140
ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citr... 506 e-140
gb|EOY28869.1| Transcription activators,DNA binding,RNA polymera... 505 e-140
emb|CBI33123.3| unnamed protein product [Vitis vinifera] 504 e-140
ref|XP_002262798.2| PREDICTED: transcription initiation factor I... 496 e-137
ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Popu... 496 e-137
gb|ESW26005.1| hypothetical protein PHAVU_003G083500g [Phaseolus... 495 e-137
gb|EMJ12738.1| hypothetical protein PRUPE_ppa003970mg [Prunus pe... 490 e-135
gb|ESW19654.1| hypothetical protein PHAVU_006G143600g [Phaseolus... 484 e-134
ref|XP_004152016.1| PREDICTED: transcription initiation factor I... 484 e-134
ref|XP_006586768.1| PREDICTED: transcription initiation factor I... 477 e-132
ref|XP_002529600.1| tfiif-alpha, putative [Ricinus communis] gi|... 472 e-130
ref|XP_006857695.1| hypothetical protein AMTR_s00061p00167160 [A... 468 e-129
ref|XP_002872663.1| mutant TFIIF-alpha [Arabidopsis lyrata subsp... 461 e-127
>ref|XP_006352367.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
isoform X4 [Solanum tuberosum]
Length = 535
Score = 534 bits (1376), Expect = e-149
Identities = 301/540 (55%), Positives = 341/540 (63%), Gaps = 1/540 (0%)
Frame = +3
Query: 228 MSMDLILKPSCSVCGSTQELYGSTCKHLTLCVSCGKSMAEKRAKCYECGTIITRLIREYN 407
MS+DLILKPSCS CGS+ +LYGS+CKHLTLC+SCGK+MAE R KCYECGT +TRLIREYN
Sbjct: 1 MSIDLILKPSCSRCGSSSDLYGSSCKHLTLCLSCGKNMAETRDKCYECGTPVTRLIREYN 60
Query: 408 VRACSNSDKNYFIGRFVSGLPNFSRKKSENKWSLQKEGLQGRQVTDTLREKYKNKPWLLE 587
VRACS++DKN+FI RF SGLP FS+KK+++KW+LQKEGLQGRQVTDTLREKYKNKPWLLE
Sbjct: 61 VRACSSNDKNHFIARFASGLPKFSKKKNDSKWTLQKEGLQGRQVTDTLREKYKNKPWLLE 120
Query: 588 DETGT-QFHGVLEGAQSATYYLLMLQGREFVAIPAASWYNFNKVAQYKQLTLEEAEEKMK 764
DETG QFHG LEGAQSA YYLLM+QG E AIPA SWYNFNKVAQYKQLTLEEAEEKMK
Sbjct: 121 DETGQFQFHGHLEGAQSAQYYLLMMQGEELFAIPAGSWYNFNKVAQYKQLTLEEAEEKMK 180
Query: 765 NRRRTADGYQRWMMKAANNGAAAFGEVXXXXXXXXXXXXXXXXXXXXXXXXEAHVSDRGX 944
NRR+TADGYQRWMMKAANNG AAFGEV E + SD G
Sbjct: 181 NRRKTADGYQRWMMKAANNGPAAFGEVERFDDKEGGSGGTRGRKKTSGDEDEGNASDHGD 240
Query: 945 XXXXXXXXRKNRLQLNKKXXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXXXXXX 1124
RKNRL LNK+ WEH
Sbjct: 241 EDEEEEAARKNRLGLNKRGIDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEAVGN 300
Query: 1125 XXXXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXX 1304
LAPEIPAPPEIKQ S
Sbjct: 301 DPEEREDLAPEIPAPPEIKQDEDDEEEGEEEGGGLSKSGKELKKLLGKANGLNESDAEDD 360
Query: 1305 XXXXXXXXXVSPVLAPKQKEALKEEPTENTSNPSKPAASGSARGTPSTTKSGKGKRKMNS 1484
+SPVLAPK KEA KEEP E T++P KPAASGS RGTP T+KS K KRK N
Sbjct: 361 DDDDDTEEDISPVLAPKPKEAPKEEPVE-TNSPLKPAASGSNRGTP-TSKSAKTKRKANG 418
Query: 1485 EESKATNTAPLKKVKSENDVKPVKEEITTPTTKHTVSSKVAXXXXXXXXXXXXXXXXVTA 1664
+ESK T+ APLKKVK+E D KP K+E T + K++ K A VT
Sbjct: 419 DESKPTSGAPLKKVKTETDAKPGKDE-TPSSAKNSALPKGA--SSSSKTAPSPATGPVTE 475
Query: 1665 DEIRAVLLHNQQVTTQDLVAKFKSRLKSKEDKDAFASILRRISRIKKQENGAAGYVVLRD 1844
DEIRAVLL + VTTQDLV++FKSRLK KEDK AFA +LR+IS+I+K G++ YVVLR+
Sbjct: 476 DEIRAVLLQRKPVTTQDLVSQFKSRLKCKEDKAAFAEVLRKISKIQKTTTGSS-YVVLRE 534
>ref|XP_006352364.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
isoform X1 [Solanum tuberosum]
gi|565371548|ref|XP_006352365.1| PREDICTED: transcription
initiation factor IIF subunit alpha-like isoform X2
[Solanum tuberosum] gi|565371550|ref|XP_006352366.1|
PREDICTED: transcription initiation factor IIF subunit
alpha-like isoform X3 [Solanum tuberosum]
Length = 538
Score = 534 bits (1376), Expect = e-149
Identities = 301/540 (55%), Positives = 341/540 (63%), Gaps = 1/540 (0%)
Frame = +3
Query: 228 MSMDLILKPSCSVCGSTQELYGSTCKHLTLCVSCGKSMAEKRAKCYECGTIITRLIREYN 407
MS+DLILKPSCS CGS+ +LYGS+CKHLTLC+SCGK+MAE R KCYECGT +TRLIREYN
Sbjct: 1 MSIDLILKPSCSRCGSSSDLYGSSCKHLTLCLSCGKNMAETRDKCYECGTPVTRLIREYN 60
Query: 408 VRACSNSDKNYFIGRFVSGLPNFSRKKSENKWSLQKEGLQGRQVTDTLREKYKNKPWLLE 587
VRACS++DKN+FI RF SGLP FS+KK+++KW+LQKEGLQGRQVTDTLREKYKNKPWLLE
Sbjct: 61 VRACSSNDKNHFIARFASGLPKFSKKKNDSKWTLQKEGLQGRQVTDTLREKYKNKPWLLE 120
Query: 588 DETGT-QFHGVLEGAQSATYYLLMLQGREFVAIPAASWYNFNKVAQYKQLTLEEAEEKMK 764
DETG QFHG LEGAQSA YYLLM+QG E AIPA SWYNFNKVAQYKQLTLEEAEEKMK
Sbjct: 121 DETGQFQFHGHLEGAQSAQYYLLMMQGEELFAIPAGSWYNFNKVAQYKQLTLEEAEEKMK 180
Query: 765 NRRRTADGYQRWMMKAANNGAAAFGEVXXXXXXXXXXXXXXXXXXXXXXXXEAHVSDRGX 944
NRR+TADGYQRWMMKAANNG AAFGEV E + SD G
Sbjct: 181 NRRKTADGYQRWMMKAANNGPAAFGEVERFDDKEGGSGGTRGRKKTSGDEDEGNASDHGD 240
Query: 945 XXXXXXXXRKNRLQLNKKXXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXXXXXX 1124
RKNRL LNK+ WEH
Sbjct: 241 EDEEEEAARKNRLGLNKRGIDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEAVGN 300
Query: 1125 XXXXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXX 1304
LAPEIPAPPEIKQ S
Sbjct: 301 DPEEREDLAPEIPAPPEIKQDEDDEEEGEEEGGGLSKSGKELKKLLGKANGLNESDAEDD 360
Query: 1305 XXXXXXXXXVSPVLAPKQKEALKEEPTENTSNPSKPAASGSARGTPSTTKSGKGKRKMNS 1484
+SPVLAPK KEA KEEP E T++P KPAASGS RGTP T+KS K KRK N
Sbjct: 361 DDDDDTEEDISPVLAPKPKEAPKEEPVE-TNSPLKPAASGSNRGTP-TSKSAKTKRKANG 418
Query: 1485 EESKATNTAPLKKVKSENDVKPVKEEITTPTTKHTVSSKVAXXXXXXXXXXXXXXXXVTA 1664
+ESK T+ APLKKVK+E D KP K+E T + K++ K A VT
Sbjct: 419 DESKPTSGAPLKKVKTETDAKPGKDE-TPSSAKNSALPKGA--SSSSKTAPSPATGPVTE 475
Query: 1665 DEIRAVLLHNQQVTTQDLVAKFKSRLKSKEDKDAFASILRRISRIKKQENGAAGYVVLRD 1844
DEIRAVLL + VTTQDLV++FKSRLK KEDK AFA +LR+IS+I+K G++ YVVLR+
Sbjct: 476 DEIRAVLLQRKPVTTQDLVSQFKSRLKCKEDKAAFAEVLRKISKIQKTTTGSS-YVVLRE 534
>ref|XP_004250258.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Solanum lycopersicum]
Length = 534
Score = 526 bits (1356), Expect = e-146
Identities = 300/540 (55%), Positives = 340/540 (62%), Gaps = 1/540 (0%)
Frame = +3
Query: 228 MSMDLILKPSCSVCGSTQELYGSTCKHLTLCVSCGKSMAEKRAKCYECGTIITRLIREYN 407
MS+DLILKPSCS CGS+ +LYGS+CKHLTLC+SCGK+MAE R KCYECGT +TRLIREYN
Sbjct: 1 MSIDLILKPSCSRCGSSSDLYGSSCKHLTLCLSCGKNMAETRDKCYECGTPVTRLIREYN 60
Query: 408 VRACSNSDKNYFIGRFVSGLPNFSRKKSENKWSLQKEGLQGRQVTDTLREKYKNKPWLLE 587
VRACS++DKN+FI RF SGLP FS+KK+++KW+LQKEGLQGRQVTDTLREKYKNKPWLLE
Sbjct: 61 VRACSSNDKNHFIARFASGLPKFSKKKNDSKWTLQKEGLQGRQVTDTLREKYKNKPWLLE 120
Query: 588 DETGT-QFHGVLEGAQSATYYLLMLQGREFVAIPAASWYNFNKVAQYKQLTLEEAEEKMK 764
DETG QFHG LEGAQSA YYLLM+QG E AIPA SWYNFNKVAQYKQLTLEEAEEKMK
Sbjct: 121 DETGQFQFHGHLEGAQSAQYYLLMMQGEELFAIPAGSWYNFNKVAQYKQLTLEEAEEKMK 180
Query: 765 NRRRTADGYQRWMMKAANNGAAAFGEVXXXXXXXXXXXXXXXXXXXXXXXXEAHVSDRGX 944
NRR+TADGYQRWMMKAANNG AAFGE+ E + SD G
Sbjct: 181 NRRKTADGYQRWMMKAANNGPAAFGELERFDDKEGGSGGTRGRKKTSGDEDEGNASDHGD 240
Query: 945 XXXXXXXXRKNRLQLNKKXXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXXXXXX 1124
RKNRL LNK+ WEH
Sbjct: 241 EDEEEEAARKNRLGLNKRGIDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEAVGN 300
Query: 1125 XXXXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXX 1304
LAPEIPAPPEIKQ S
Sbjct: 301 DPEEREDLAPEIPAPPEIKQDEDDEEEGEEEGGGLSKSGKELKKLLGKANGLNES-DEDD 359
Query: 1305 XXXXXXXXXVSPVLAPKQKEALKEEPTENTSNPSKPAASGSARGTPSTTKSGKGKRKMNS 1484
+SPVLAPK KEA KEEP E T++P K AASGS RGTP T+KS K KRK N
Sbjct: 360 DDDDDTEEDISPVLAPKPKEAPKEEPVE-TNSPLKAAASGSNRGTP-TSKSAKTKRKANG 417
Query: 1485 EESKATNTAPLKKVKSENDVKPVKEEITTPTTKHTVSSKVAXXXXXXXXXXXXXXXXVTA 1664
+ESK T+ APLKKVK+E D KP K+E T + K+T K A VT
Sbjct: 418 DESKPTSGAPLKKVKTEADAKPGKDE-TPSSAKNTALPKGA--SSSSKTAPSSATGPVTE 474
Query: 1665 DEIRAVLLHNQQVTTQDLVAKFKSRLKSKEDKDAFASILRRISRIKKQENGAAGYVVLRD 1844
DEIRAVLL + VTTQDLV++FKSRLK KEDK AFA +LR+IS+I+K G++ YVVLR+
Sbjct: 475 DEIRAVLLQRKPVTTQDLVSQFKSRLKCKEDKAAFAEVLRKISKIQKTTTGSS-YVVLRE 533
>ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|223541454|gb|EEF43004.1|
tfiif-alpha, putative [Ricinus communis]
Length = 533
Score = 525 bits (1353), Expect = e-146
Identities = 292/541 (53%), Positives = 344/541 (63%), Gaps = 3/541 (0%)
Frame = +3
Query: 231 SMDLILKPSCSVCGSTQELYGSTCKHLTLCVSCGKSMAEKRAKCYECGTIITRLIREYNV 410
+MDL+LK SCS CGST +LYGS CKH+TLC+SCGK+MAE AKC++CG ++RLIREYNV
Sbjct: 3 TMDLMLKGSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHAKCFDCGATVSRLIREYNV 62
Query: 411 RACSNSDKNYFIGRFVSGLPNFSRKKS-ENKWSLQKEGLQGRQVTDTLREKYKNKPWLLE 587
RA S+SDKNYFIGRFV+GLP+FS+KK+ ENKWSLQKEGLQGRQ+TD LREKYKN+PWLLE
Sbjct: 63 RASSSSDKNYFIGRFVTGLPSFSKKKNAENKWSLQKEGLQGRQLTDALREKYKNRPWLLE 122
Query: 588 DETGT-QFHGVLEGAQSATYYLLMLQGREFVAIPAASWYNFNKVAQYKQLTLEEAEEKMK 764
DETG Q+ G LEG+QSATYYLL+LQG+EFVAIPA+SWYNFNKVAQYKQLTLEEAEEKM+
Sbjct: 123 DETGQFQYQGHLEGSQSATYYLLILQGKEFVAIPASSWYNFNKVAQYKQLTLEEAEEKMR 182
Query: 765 NRRRTADGYQRWMMKAANNGAAAFGEVXXXXXXXXXXXXXXXXXXXXXXXXEAHVSDRGX 944
NRR+TADGY+RWMMKAANNG AAFGEV E +VSDRG
Sbjct: 183 NRRKTADGYERWMMKAANNGPAAFGEVEKLDDKDSGAASGRGRKKAAGDDEEGNVSDRGD 242
Query: 945 XXXXXXXXRKNRLQLNKKXXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXXXXXX 1124
RKNRL LNK+ WEH
Sbjct: 243 EDEEEEAARKNRLGLNKRGGDDDEEGPRGGDHDIDDDDIEKGDDWEHEEIFTDDDEAVGN 302
Query: 1125 XXXXXXXLAPEIPAPPEIKQ-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXX 1301
LAPE+PAPPEIKQ +
Sbjct: 303 DREEREDLAPEVPAPPEIKQDEDDEDEENEEGGLSKSGKELKKLLGRAGGLNDSDAEDDD 362
Query: 1302 XXXXXXXXXXVSPVLAPKQKEALKEEPTENTSNPSKPAASGSARGTPSTTKSGKGKRKMN 1481
+SPVLAPKQ KEEP +N +P+KP S S++GTPST+KS KGKRK+N
Sbjct: 363 DDDDMDEDVSISPVLAPKQTP--KEEPADN--SPAKPMTSASSKGTPSTSKSAKGKRKLN 418
Query: 1482 SEESKATNTAPLKKVKSENDVKPVKEEITTPTTKHTVSSKVAXXXXXXXXXXXXXXXXVT 1661
S+E+K TN AP KKVK+EN++KP +E + PT+K + + K A VT
Sbjct: 419 SDEAKQTNVAPQKKVKTENELKPTVKEESAPTSKSSATPKAA-----PPSAKTGSTSPVT 473
Query: 1662 ADEIRAVLLHNQQVTTQDLVAKFKSRLKSKEDKDAFASILRRISRIKKQENGAAGYVVLR 1841
+EIRAVLL N VTTQDLVA+FKSRLKS EDK AFA ILRRIS+I Q+ + YVVLR
Sbjct: 474 EEEIRAVLLQNGPVTTQDLVARFKSRLKSSEDKKAFADILRRISKI--QKTSGSSYVVLR 531
Query: 1842 D 1844
D
Sbjct: 532 D 532
>ref|XP_002322538.2| transcription initiation factor IIF alpha subunit family protein
[Populus trichocarpa] gi|550320589|gb|EEF04299.2|
transcription initiation factor IIF alpha subunit family
protein [Populus trichocarpa]
Length = 540
Score = 516 bits (1329), Expect = e-143
Identities = 288/544 (52%), Positives = 345/544 (63%), Gaps = 5/544 (0%)
Frame = +3
Query: 228 MSMDLILKPSCSVCGSTQELYGSTCKHLTLCVSCGKSMAEKRAKCYECGTIITRLIREYN 407
MS DL+LKPSCS CGST +LYGS CKH+TLC++CGK+MAE R KC++CGT ++RLIREYN
Sbjct: 1 MSFDLLLKPSCSGCGSTTDLYGSNCKHMTLCLNCGKTMAENRGKCFDCGTTVSRLIREYN 60
Query: 408 VRACSNSDKNYFIGRFVSGLPNFSRKK-SENKWSLQKEGLQGRQVTDTLREKYKNKPWLL 584
VRA ++SDKNYFIGRFV+GLP+FS+KK +ENKWSL KEG+ GRQ+TD LREK+KNKPWLL
Sbjct: 61 VRASTSSDKNYFIGRFVTGLPSFSKKKNAENKWSLHKEGILGRQITDALREKFKNKPWLL 120
Query: 585 EDETG-TQFHGVLEGAQSATYYLLMLQGREFVAIPAASW--YNFNKVAQYKQLTLEEAEE 755
EDETG +Q+ G LEG+QSATYYLLM+ G+EFVAIPA SW YNFNKVA YKQLTLEEAEE
Sbjct: 121 EDETGQSQYQGHLEGSQSATYYLLMMTGKEFVAIPAGSWYVYNFNKVAHYKQLTLEEAEE 180
Query: 756 KMKNRRRTADGYQRWMMKAANNGAAAFGEV-XXXXXXXXXXXXXXXXXXXXXXXXEAHVS 932
KMKNRR+TADGY+RWMMKAANNGAAAFGEV E +VS
Sbjct: 181 KMKNRRKTADGYERWMMKAANNGAAAFGEVEKVDDKEGVSAGGRGGRRKASGDDDEGNVS 240
Query: 933 DRGXXXXXXXXXRKNRLQLNKKXXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXX 1112
DRG RK+RL LNK+ WEH
Sbjct: 241 DRGEEDEEEEAGRKSRLGLNKQGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDE 300
Query: 1113 XXXXXXXXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSX 1292
LAPE+PAPPEIKQ S
Sbjct: 301 AVAIDPEEREDLAPEVPAPPEIKQ-DEDDEDEENEEGGLSKSGKELKKLLGKANGLNESD 359
Query: 1293 XXXXXXXXXXXXXVSPVLAPKQKEALKEEPTENTSNPSKPAASGSARGTPSTTKSGKGKR 1472
+SPVLAPKQK+ + +E + S P+KP SGSA+GTPST+KS KGKR
Sbjct: 360 VEDDDDDEDMDDDISPVLAPKQKDVVPKEEAADIS-PAKPTPSGSAKGTPSTSKSAKGKR 418
Query: 1473 KMNSEESKATNTAPLKKVKSENDVKPVKEEITTPTTKHTVSSKVAXXXXXXXXXXXXXXX 1652
K+N E++K++N AP+KKVK+EN+VKP +E ++P TK T + KV
Sbjct: 419 KLNGEDAKSSNGAPVKKVKTENEVKPAVKEESSPATKGTATPKVT-PPSSKTGSTSGSTG 477
Query: 1653 XVTADEIRAVLLHNQQVTTQDLVAKFKSRLKSKEDKDAFASILRRISRIKKQENGAAGYV 1832
VT +EIRAVLL N VTTQDLVA+FKSRL++ EDK AFA ILRRIS+I Q+ + YV
Sbjct: 478 PVTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKI--QKTSGSNYV 535
Query: 1833 VLRD 1844
VLRD
Sbjct: 536 VLRD 539
>ref|XP_002308775.1| transcription initiation factor IIF alpha subunit family protein
[Populus trichocarpa] gi|222854751|gb|EEE92298.1|
transcription initiation factor IIF alpha subunit family
protein [Populus trichocarpa]
Length = 541
Score = 510 bits (1313), Expect = e-141
Identities = 286/545 (52%), Positives = 345/545 (63%), Gaps = 6/545 (1%)
Frame = +3
Query: 228 MSMDLILKPSCSVCGSTQELYGSTCKHLTLCVSCGKSMAEKRAKCYECGTIITRLIREYN 407
MS DL L+PSCS CGST +LYGS CKH+TLC++CGK+MAE R KC++CG I+TRLIREYN
Sbjct: 1 MSFDLQLQPSCSGCGSTTDLYGSNCKHMTLCLTCGKTMAENRGKCFDCGAIVTRLIREYN 60
Query: 408 VRACSNSDKNYFIGRFVSGLPNFSRKK-SENKWSLQKEGLQGRQVTDTLREKYKNKPWLL 584
VRA ++S+KNYFIGRFV+GLP FS+KK +ENKWSL KEG+ GRQ+TDTLREK+KNKPWLL
Sbjct: 61 VRASTSSEKNYFIGRFVTGLPGFSKKKNAENKWSLLKEGIHGRQITDTLREKFKNKPWLL 120
Query: 585 EDETGT-QFHGVLEGAQSATYYLLMLQGREFVAIPAASW--YNFNKVAQYKQLTLEEAEE 755
EDETG Q+ G LEG+QSATYYLLM+ G+EFVAIPA SW YNFNKVA YKQLTLEEAEE
Sbjct: 121 EDETGQFQYQGHLEGSQSATYYLLMMSGKEFVAIPAGSWYGYNFNKVAHYKQLTLEEAEE 180
Query: 756 KMKNRRRTADGYQRWMMKAANNGAAAFGEV-XXXXXXXXXXXXXXXXXXXXXXXXEAHVS 932
KMKNRR+TADGY+RWMMKAA+NGAAAFGEV E +VS
Sbjct: 181 KMKNRRKTADGYERWMMKAAHNGAAAFGEVEKPDDKDGVSAGGRGGRKKANGDDDEGNVS 240
Query: 933 DRGXXXXXXXXXRKNRLQLNKKXXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXX 1112
D+G RK+RL LNK WEH
Sbjct: 241 DKGEEDEEEEAGRKSRLGLNKGGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDE 300
Query: 1113 XXXXXXXXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSX 1292
LAPE+PAPPEIKQ S
Sbjct: 301 AVAIDPEEREDLAPEVPAPPEIKQ-DEEDEDEENEEGGLSKSGKELKKLLGKANGLNESD 359
Query: 1293 XXXXXXXXXXXXXVSPVLAPKQKEAL-KEEPTENTSNPSKPAASGSARGTPSTTKSGKGK 1469
+SPVLAPKQK+A+ KEEP +N +P+KP GSA+GTPST+KS KGK
Sbjct: 360 AEDDDDDDDMDDDISPVLAPKQKDAVPKEEPADN--SPAKPTPPGSAKGTPSTSKSAKGK 417
Query: 1470 RKMNSEESKATNTAPLKKVKSENDVKPVKEEITTPTTKHTVSSKVAXXXXXXXXXXXXXX 1649
RK+N++++K +N AP+KKVK+EN+VKP +E ++P TK T + K+
Sbjct: 418 RKLNADDAKTSNGAPVKKVKTENEVKPTVKEESSPATKGTATPKI-MPSSSKTGPTSGPT 476
Query: 1650 XXVTADEIRAVLLHNQQVTTQDLVAKFKSRLKSKEDKDAFASILRRISRIKKQENGAAGY 1829
VT +EIRAVLL N VTTQDLVA+FKSRL++ EDK AFA ILRRIS+I Q+ + +
Sbjct: 477 GPVTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKI--QKTSGSNF 534
Query: 1830 VVLRD 1844
VVLRD
Sbjct: 535 VVLRD 539
>ref|XP_006467340.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
isoform X1 [Citrus sinensis]
gi|568825955|ref|XP_006467341.1| PREDICTED: transcription
initiation factor IIF subunit alpha-like isoform X2
[Citrus sinensis]
Length = 538
Score = 507 bits (1305), Expect = e-140
Identities = 283/543 (52%), Positives = 335/543 (61%), Gaps = 4/543 (0%)
Frame = +3
Query: 228 MSMDLILKPSCSVCGSTQELYGSTCKHLTLCVSCGKSMAEKRAKCYECGTIITRLIREYN 407
MS DL+LKP CS CGS +LYGS CKH+TLC++CGK+MAE +AKC++CG I+TRLIREYN
Sbjct: 1 MSFDLLLKPQCSGCGSQADLYGSNCKHMTLCLTCGKTMAENKAKCFDCGAIVTRLIREYN 60
Query: 408 VRACSNSDKNYFIGRFVSGLPNFSRKKS-ENKWSLQKEGLQGRQVTDTLREKYKNKPWLL 584
VR ++SDKNYFIGRFVSGLP+FS+KK+ ENKW+L K+GLQGRQVTDTLREKYKNKPW+L
Sbjct: 61 VRPSNSSDKNYFIGRFVSGLPSFSKKKNAENKWTLHKDGLQGRQVTDTLREKYKNKPWML 120
Query: 585 EDETG-TQFHGVLEGAQSATYYLLMLQGREFVAIPAASWYNFNKVAQYKQLTLEEAEEKM 761
EDETG Q+ G LEG+QSATYYLL++ +EFVAIPA SWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121 EDETGQAQYQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180
Query: 762 KNRRRTADGYQRWMMKAANNGAAAFGEVXXXXXXXXXXXXXXXXXXXXXXXXEAHVSDRG 941
KNRR+TADGY+RWMMKAANNGAAAFGEV E +VSDRG
Sbjct: 181 KNRRKTADGYERWMMKAANNGAAAFGEVEKPDDKESAGTGGRGRSKKSGDEDEGNVSDRG 240
Query: 942 XXXXXXXXXRKNRLQLNKKXXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXXXXX 1121
RKNRL LNK+ WEH
Sbjct: 241 EEDEDEEAKRKNRLGLNKRGEDDDEEGPRGGDLDLDEDDVEKGDDWEHEEIFTDDDEAVG 300
Query: 1122 XXXXXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-XXX 1298
LAPE+PAPPEIKQ +
Sbjct: 301 NDPEEREDLAPEVPAPPEIKQDEEDEDEEEEGGLSKSGKELKKLLGRANGLNESDAEDDD 360
Query: 1299 XXXXXXXXXXXVSPVLAPKQKEA-LKEEPTENTSNPSKPAASGSARGTPSTTKSGKGKRK 1475
SP+LAPK K+ KEEP +N +P+KPA SGS R TPST+KS KGKRK
Sbjct: 361 DEDDDMEDEVGFSPILAPKHKDTPKKEEPADN--SPAKPAPSGSGRATPSTSKSAKGKRK 418
Query: 1476 MNSEESKATNTAPLKKVKSENDVKPVKEEITTPTTKHTVSSKVAXXXXXXXXXXXXXXXX 1655
N ++++A + APLKKVK+EN+ K + +K SS A
Sbjct: 419 SNGDDARAPSGAPLKKVKTENETKSSARDENVSASK---SSAPAKGASSSRTGSTSASGP 475
Query: 1656 VTADEIRAVLLHNQQVTTQDLVAKFKSRLKSKEDKDAFASILRRISRIKKQENGAAGYVV 1835
VTA+EIRAVLL VTTQDLVAKFK RL+S ED+ AFA IL+RIS+I+K NG + YVV
Sbjct: 476 VTAEEIRAVLLQQAPVTTQDLVAKFKPRLRSTEDRTAFADILKRISKIQK-TNGPSNYVV 534
Query: 1836 LRD 1844
LR+
Sbjct: 535 LRE 537
>ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citrus clementina]
gi|567915083|ref|XP_006449855.1| hypothetical protein
CICLE_v10014841mg [Citrus clementina]
gi|557552465|gb|ESR63094.1| hypothetical protein
CICLE_v10014841mg [Citrus clementina]
gi|557552466|gb|ESR63095.1| hypothetical protein
CICLE_v10014841mg [Citrus clementina]
Length = 538
Score = 506 bits (1304), Expect = e-140
Identities = 283/543 (52%), Positives = 335/543 (61%), Gaps = 4/543 (0%)
Frame = +3
Query: 228 MSMDLILKPSCSVCGSTQELYGSTCKHLTLCVSCGKSMAEKRAKCYECGTIITRLIREYN 407
MS DL+LKP CS CGS +LYGS CKH+TLC++CGK+MAE +AKC++CG I+TRLIREYN
Sbjct: 1 MSFDLLLKPQCSGCGSQVDLYGSNCKHMTLCLTCGKTMAENKAKCFDCGAIVTRLIREYN 60
Query: 408 VRACSNSDKNYFIGRFVSGLPNFSRKKS-ENKWSLQKEGLQGRQVTDTLREKYKNKPWLL 584
VR ++SDKNYFIGRFVSGLP+FS+KK+ ENKW+L K+GLQGRQVTDTLREKYKNKPW+L
Sbjct: 61 VRPSNSSDKNYFIGRFVSGLPSFSKKKNAENKWTLHKDGLQGRQVTDTLREKYKNKPWML 120
Query: 585 EDETG-TQFHGVLEGAQSATYYLLMLQGREFVAIPAASWYNFNKVAQYKQLTLEEAEEKM 761
EDETG Q+ G LEG+QSATYYLL++ +EFVAIPA SWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121 EDETGQAQYQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180
Query: 762 KNRRRTADGYQRWMMKAANNGAAAFGEVXXXXXXXXXXXXXXXXXXXXXXXXEAHVSDRG 941
KNRR+TADGY+RWMMKAANNGAAAFGEV E +VSDRG
Sbjct: 181 KNRRKTADGYERWMMKAANNGAAAFGEVEKPDDKESAGTGGRGRSKKSGDEDEGNVSDRG 240
Query: 942 XXXXXXXXXRKNRLQLNKKXXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXXXXX 1121
RKNRL LNK+ WEH
Sbjct: 241 EEDEDEEAKRKNRLGLNKRGEDDDEEGPRGGDLDLDEDDVEKGDDWEHEEIFTDDDEAVG 300
Query: 1122 XXXXXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-XXX 1298
LAPE+PAPPEIKQ +
Sbjct: 301 NDPEEREDLAPEVPAPPEIKQDEEDEDEEEEGGLSKSGKELKKLLGRANGLNESDAEDDD 360
Query: 1299 XXXXXXXXXXXVSPVLAPKQKEA-LKEEPTENTSNPSKPAASGSARGTPSTTKSGKGKRK 1475
SP+LAPK K+ KEEP +N +P+KPA SGS R TPST+KS KGKRK
Sbjct: 361 DEDDDMEDEVGFSPILAPKHKDTPKKEEPADN--SPAKPAPSGSGRATPSTSKSAKGKRK 418
Query: 1476 MNSEESKATNTAPLKKVKSENDVKPVKEEITTPTTKHTVSSKVAXXXXXXXXXXXXXXXX 1655
N ++++A + APLKKVK+EN+ K + +K SS A
Sbjct: 419 SNGDDARAPSGAPLKKVKTENETKSSARDENVSASK---SSAPAKGASSSRTGSTSASGP 475
Query: 1656 VTADEIRAVLLHNQQVTTQDLVAKFKSRLKSKEDKDAFASILRRISRIKKQENGAAGYVV 1835
VTA+EIRAVLL VTTQDLVAKFK RL+S ED+ AFA IL+RIS+I+K NG + YVV
Sbjct: 476 VTAEEIRAVLLQQAPVTTQDLVAKFKPRLRSTEDRTAFADILKRISKIQK-TNGPSNYVV 534
Query: 1836 LRD 1844
LR+
Sbjct: 535 LRE 537
>gb|EOY28869.1| Transcription activators,DNA binding,RNA polymerase II transcription
factors,catalytics,transcription initiation factors
isoform 1 [Theobroma cacao]
Length = 549
Score = 505 bits (1300), Expect = e-140
Identities = 291/553 (52%), Positives = 336/553 (60%), Gaps = 14/553 (2%)
Frame = +3
Query: 228 MSMDLILKPSCSVCGSTQELYGSTCKHLTLCVSCGKSMAEKRAKCYECGTIITRLIREYN 407
MS DL+LK SCS CGST +LYGS CKH+TLCV+CGK+MAE + KC+ECG I+TRLIREYN
Sbjct: 1 MSFDLMLKSSCSGCGSTVDLYGSNCKHMTLCVTCGKTMAENQGKCFECGAIVTRLIREYN 60
Query: 408 VRACSNSDKNYFIGRFVSGLPNFSRKKS-ENKWSLQKEGLQGRQVTDTLREKYKNKPWLL 584
VR ++DKN+FIGRF+SGLP+FS+KK+ ENKWSLQKEGLQGRQ+TD LREKYKNKPW+L
Sbjct: 61 VRPSPSTDKNFFIGRFMSGLPSFSKKKNAENKWSLQKEGLQGRQLTDPLREKYKNKPWML 120
Query: 585 EDETG-TQFHGVLEGAQSATYYLLMLQGREFVAIPAASWYNFNKVAQYKQLTLEEAEEKM 761
EDETG Q+ G LEG+QSATYYLLM+QG+EFVAIPA SWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121 EDETGQAQYQGHLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180
Query: 762 KNRRRTADGYQRWMMKAANNGAAAFGEVXXXXXXXXXXXXXXXXXXXXXXXXEAHVSDRG 941
KNRR+TADGY+RWMMKAANNGAAAFGEV E HVSDRG
Sbjct: 181 KNRRKTADGYERWMMKAANNGAAAFGEVEKFDDKDNSVAGGKGRKKPTGDDDEGHVSDRG 240
Query: 942 XXXXXXXXXRKNRLQLNKKXXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXXXXX 1121
RKNRL L+KK WEH
Sbjct: 241 EEDEEEEAARKNRLGLDKKGGDDDEEGPRGGDLDMDDDDIEKGDDWEH-EEIFTDDDEAV 299
Query: 1122 XXXXXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXX 1301
LAPE+PAPPEIK+ +
Sbjct: 300 GNEPEERDLAPEVPAPPEIKEDEDEEDEEQEGGLSKSGKELKKLLGKAGGLNDSDA-DDD 358
Query: 1302 XXXXXXXXXXVSPVLAPKQKEALKEEPTENTSNPSKPAASGSARGTPSTTKSGKGKRKMN 1481
+P A KQK+A KEEP +N +P KPA+S SARGT + +KS KGKRK N
Sbjct: 359 DDDDDDDDMSFNPAPASKQKDAPKEEPADN--SPMKPASSASARGTSTASKSAKGKRKAN 416
Query: 1482 SEESKATNTAPLKKVKSENDVK-PVKEEIT-----------TPTTKHTVSSKVAXXXXXX 1625
+++KA+N PLKKVKSE D K VKEE TP++ S+ A
Sbjct: 417 GDDTKASNGTPLKKVKSETDSKSSVKEESASASKGSVPPKGTPSSAKAGSTSSAVTSSSA 476
Query: 1626 XXXXXXXXXXVTADEIRAVLLHNQQVTTQDLVAKFKSRLKSKEDKDAFASILRRISRIKK 1805
VT +EIRAVLL VTT DLVAKFK+RLKS EDK AFA ILRRIS+I+K
Sbjct: 477 KAGSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDKKAFADILRRISKIQK 536
Query: 1806 QENGAAGYVVLRD 1844
NG YVVLRD
Sbjct: 537 -TNGPNNYVVLRD 548
>emb|CBI33123.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 504 bits (1297), Expect = e-140
Identities = 295/550 (53%), Positives = 333/550 (60%), Gaps = 11/550 (2%)
Frame = +3
Query: 228 MSMDLILKPSCSVCGSTQELYGSTCKHLTLCVSCGKSMAEKRAKCYECGTIITRLIREYN 407
MS DL+LKPSCS CGST +LYGS CKH+TLC+SCGK+MAE KCY+CGT +TRLIREYN
Sbjct: 1 MSFDLMLKPSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYDCGTPVTRLIREYN 60
Query: 408 VRACSNSDKNYFIGRFVSGLPNFSRKKS-ENKWSLQKEGLQGRQVTDTLREKYKNKPWLL 584
VR S+ DKNYFIGRFV+GLP FS+KK+ +NKWSL KEGLQGRQV+D LREKYKNKPWLL
Sbjct: 61 VRTNSSGDKNYFIGRFVTGLPGFSKKKNADNKWSLHKEGLQGRQVSDALREKYKNKPWLL 120
Query: 585 EDETGT-QFHGVLEGAQSATYYLLMLQGREFVAIPAASWYNFNKVAQYKQLTLEEAEEKM 761
EDETG Q+HG LEG+QSATYYLLM+QG+EFVAIPA SWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121 EDETGQYQYHGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180
Query: 762 KNRRRTADGYQRWMMKAANNGAAAFGEV--XXXXXXXXXXXXXXXXXXXXXXXXEAHVSD 935
KNRRRTADGYQRWMMKAANNG AAFGEV E +VSD
Sbjct: 181 KNRRRTADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGGRGRKKQTGDEEEGNVSD 240
Query: 936 RGXXXXXXXXXRKNRLQLNKKXXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXXX 1115
+ RKNRL LNK+ WEH
Sbjct: 241 KAEEDEEEEAERKNRLGLNKRSGDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDEA 300
Query: 1116 XXXXXXXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-X 1292
LAPE+PAPPEIKQ S
Sbjct: 301 VGNDPEEREDLAPEVPAPPEIKQDEEDEDDSNEEEGGLSKSGKELKKLLGKAAGMNDSDA 360
Query: 1293 XXXXXXXXXXXXXVSPVLAPKQKEALKEEPTENTSNPSKPAASGSARGTPSTTKSGKGKR 1472
+SPVLAPKQK+ KEEP +N +P K +A+ SAR TP T+KS KGKR
Sbjct: 361 EDDDDDEEEDEIGLSPVLAPKQKDVPKEEPADN--SPMK-SATASARSTPPTSKSSKGKR 417
Query: 1473 KMNSEESKATNTAPLKKVKSENDVK-PVKEEITTP-----TTKHTVSSKVAXXXXXXXXX 1634
K N ++ K TN P KKVK+EN+ K K+E +P T K T SS V
Sbjct: 418 KSNGDDMKTTNGGPPKKVKTENESKSSAKDEGPSPSKVTATPKGTPSSSV-------KTG 470
Query: 1635 XXXXXXXVTADEIRAVLLHNQQVTTQDLVAKFKSRLKSKEDKDAFASILRRISRIKKQEN 1814
VT DEIRAVLL VTTQDLVAKFK+RLKS+EDK AFA ILRRIS+I Q+
Sbjct: 471 STSSAGPVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKI--QKT 528
Query: 1815 GAAGYVVLRD 1844
YVVLRD
Sbjct: 529 NGPNYVVLRD 538
>ref|XP_002262798.2| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Vitis vinifera]
Length = 534
Score = 496 bits (1278), Expect = e-137
Identities = 291/545 (53%), Positives = 329/545 (60%), Gaps = 11/545 (2%)
Frame = +3
Query: 243 ILKPSCSVCGSTQELYGSTCKHLTLCVSCGKSMAEKRAKCYECGTIITRLIREYNVRACS 422
+LKPSCS CGST +LYGS CKH+TLC+SCGK+MAE KCY+CGT +TRLIREYNVR S
Sbjct: 1 MLKPSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYDCGTPVTRLIREYNVRTNS 60
Query: 423 NSDKNYFIGRFVSGLPNFSRKKS-ENKWSLQKEGLQGRQVTDTLREKYKNKPWLLEDETG 599
+ DKNYFIGRFV+GLP FS+KK+ +NKWSL KEGLQGRQV+D LREKYKNKPWLLEDETG
Sbjct: 61 SGDKNYFIGRFVTGLPGFSKKKNADNKWSLHKEGLQGRQVSDALREKYKNKPWLLEDETG 120
Query: 600 T-QFHGVLEGAQSATYYLLMLQGREFVAIPAASWYNFNKVAQYKQLTLEEAEEKMKNRRR 776
Q+HG LEG+QSATYYLLM+QG+EFVAIPA SWYNFNKVAQYKQLTLEEAEEKMKNRRR
Sbjct: 121 QYQYHGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRR 180
Query: 777 TADGYQRWMMKAANNGAAAFGEV--XXXXXXXXXXXXXXXXXXXXXXXXEAHVSDRGXXX 950
TADGYQRWMMKAANNG AAFGEV E +VSD+
Sbjct: 181 TADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGGRGRKKQTGDEEEGNVSDKAEED 240
Query: 951 XXXXXXRKNRLQLNKKXXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXXXXXXXX 1130
RKNRL LNK+ WEH
Sbjct: 241 EEEEAERKNRLGLNKRSGDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDEAVGNDP 300
Query: 1131 XXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-XXXXXX 1307
LAPE+PAPPEIKQ S
Sbjct: 301 EEREDLAPEVPAPPEIKQDEEDEDDSNEEEGGLSKSGKELKKLLGKAAGMNDSDAEDDDD 360
Query: 1308 XXXXXXXXVSPVLAPKQKEALKEEPTENTSNPSKPAASGSARGTPSTTKSGKGKRKMNSE 1487
+SPVLAPKQK+ KEEP +N +P K +A+ SAR TP T+KS KGKRK N +
Sbjct: 361 DEEEDEIGLSPVLAPKQKDVPKEEPADN--SPMK-SATASARSTPPTSKSSKGKRKSNGD 417
Query: 1488 ESKATNTAPLKKVKSENDVK-PVKEEITTP-----TTKHTVSSKVAXXXXXXXXXXXXXX 1649
+ K TN P KKVK+EN+ K K+E +P T K T SS V
Sbjct: 418 DMKTTNGGPPKKVKTENESKSSAKDEGPSPSKVTATPKGTPSSSV-------KTGSTSSA 470
Query: 1650 XXVTADEIRAVLLHNQQVTTQDLVAKFKSRLKSKEDKDAFASILRRISRIKKQENGAAGY 1829
VT DEIRAVLL VTTQDLVAKFK+RLKS+EDK AFA ILRRIS+I Q+ Y
Sbjct: 471 GPVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKI--QKTNGPNY 528
Query: 1830 VVLRD 1844
VVLRD
Sbjct: 529 VVLRD 533
>ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Populus trichocarpa]
gi|550335193|gb|ERP58675.1| hypothetical protein
POPTR_0006s01070g [Populus trichocarpa]
Length = 536
Score = 496 bits (1276), Expect = e-137
Identities = 282/545 (51%), Positives = 340/545 (62%), Gaps = 6/545 (1%)
Frame = +3
Query: 228 MSMDLILKPSCSVCGSTQELYGSTCKHLTLCVSCGKSMAEKRAKCYECGTIITRLIREYN 407
MS DL L+PSCS CGST +LYGS CKH+TLC++CGK+MAE R KC++CG I+TRLIREYN
Sbjct: 1 MSFDLQLQPSCSGCGSTTDLYGSNCKHMTLCLTCGKTMAENRGKCFDCGAIVTRLIREYN 60
Query: 408 VRACSNSDKNYFIGRFVSGLPNFSRKK-SENKWSLQKEGLQGRQVTDTLREKYKNKPWLL 584
VRA ++S+KNYFIGRFV+GLP FS+KK +ENKWSL KEG+ GRQ+TDTLREK+KNKPWLL
Sbjct: 61 VRASTSSEKNYFIGRFVTGLPGFSKKKNAENKWSLLKEGIHGRQITDTLREKFKNKPWLL 120
Query: 585 EDETGT-QFHGVLEGAQSATYYLLMLQGREFVAIPAASW--YNFNKVAQYKQLTLEEAEE 755
EDETG Q+ G LEG+QSATYYLLM+ G+EFVAIPA SW YNFNKVA YKQLTLEEAEE
Sbjct: 121 EDETGQFQYQGHLEGSQSATYYLLMMSGKEFVAIPAGSWYGYNFNKVAHYKQLTLEEAEE 180
Query: 756 KMKNRRRTADGYQRWMMKAANNGAAAFGEV-XXXXXXXXXXXXXXXXXXXXXXXXEAHVS 932
KMKNRR+TADGY+RWMMKAA+NGAAAFGEV E +VS
Sbjct: 181 KMKNRRKTADGYERWMMKAAHNGAAAFGEVEKPDDKDGVSAGGRGGRKKANGDDDEGNVS 240
Query: 933 DRGXXXXXXXXXRKNRLQLNKKXXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXX 1112
D+G RK+RL LNK WEH
Sbjct: 241 DKGEEDEEEEAGRKSRLGLNKGGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDE 300
Query: 1113 XXXXXXXXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSX 1292
LAPE+PAPPEIKQ S
Sbjct: 301 AVAIDPEEREDLAPEVPAPPEIKQ-DEEDEDEENEEGGLSKSGKELKKLLGKANGLNESD 359
Query: 1293 XXXXXXXXXXXXXVSPVLAPKQKEAL-KEEPTENTSNPSKPAASGSARGTPSTTKSGKGK 1469
+SPVLAPKQK+A+ KEEP +N +P+KP GSA+GTPST+KS KGK
Sbjct: 360 AEDDDDDDDMDDDISPVLAPKQKDAVPKEEPADN--SPAKPTPPGSAKGTPSTSKSAKGK 417
Query: 1470 RKMNSEESKATNTAPLKKVKSENDVKPVKEEITTPTTKHTVSSKVAXXXXXXXXXXXXXX 1649
RK+N++++K +N AP+KK +VKP +E ++P TK T + K+
Sbjct: 418 RKLNADDAKTSNGAPVKK-----EVKPTVKEESSPATKGTATPKI-MPSSSKTGPTSGPT 471
Query: 1650 XXVTADEIRAVLLHNQQVTTQDLVAKFKSRLKSKEDKDAFASILRRISRIKKQENGAAGY 1829
VT +EIRAVLL N VTTQDLVA+FKSRL++ EDK AFA ILRRIS+I Q+ + +
Sbjct: 472 GPVTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKI--QKTSGSNF 529
Query: 1830 VVLRD 1844
VVLRD
Sbjct: 530 VVLRD 534
>gb|ESW26005.1| hypothetical protein PHAVU_003G083500g [Phaseolus vulgaris]
Length = 540
Score = 495 bits (1275), Expect = e-137
Identities = 280/544 (51%), Positives = 334/544 (61%), Gaps = 5/544 (0%)
Frame = +3
Query: 228 MSMDLILKPSCSVCGSTQELYGSTCKHLTLCVSCGKSMAEKRAKCYECGTIITRLIREYN 407
MS+DL+LKP+C CGST +LYGS CKH+TLC++CGK+MAE +AKC++CG +TRLIREY+
Sbjct: 1 MSIDLLLKPTCGGCGSTTDLYGSNCKHMTLCLTCGKTMAENKAKCFDCGATVTRLIREYS 60
Query: 408 VRACSNSDKNYFIGRFVSGLPNFSRKKS-ENKWSLQKEGLQGRQVTDTLREKYKNKPWLL 584
VRA S SDK+YFIGRFVSGLP+FS+KKS ENKWSLQKEGLQ RQVTD LREKYKNKPWLL
Sbjct: 61 VRASSGSDKHYFIGRFVSGLPDFSKKKSAENKWSLQKEGLQSRQVTDALREKYKNKPWLL 120
Query: 585 EDETG-TQFHGVLEGAQSATYYLLMLQGREFVAIPAASWYNFNKVAQYKQLTLEEAEEKM 761
EDETG +QF G LEGAQSATYYLLM++ +EFVAIPA SWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121 EDETGQSQFQGHLEGAQSATYYLLMMERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180
Query: 762 KNRRRTADGYQRWMMKAANNGAAAFGEVXXXXXXXXXXXXXXXXXXXXXXXXEAHVSDRG 941
KNR++TADGY+RWMMKAANNG AAFGE E HVSD+G
Sbjct: 181 KNRKKTADGYERWMMKAANNGPAAFGERGRFDEKESNVGGGGKNRKKTDEDEEGHVSDKG 240
Query: 942 XXXXXXXXXRKNRLQLNKKXXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXXXXX 1121
R++RL LNKK WEH
Sbjct: 241 EEDEDDEVARRSRLGLNKKGGDDDEEGPRGGDLDQDDDDIEKGDDWEHEEIFTDDDEAVG 300
Query: 1122 XXXXXXXXLAPEIPAPPEIKQ-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXX 1298
LAPE+PAPPEIKQ +
Sbjct: 301 NDPEEREDLAPEVPAPPEIKQDDEDEDEDNEEGGGLSKSGKELKKLLRTSGLNESDAEDD 360
Query: 1299 XXXXXXXXXXXVSPVLAPKQKEALKEEPTENTSNPSKPAASGSARGTPSTTKSGKGKRKM 1478
V PV+A K K+A KEEP +N +PSKPA +G+ARGT ST+K KGKRK+
Sbjct: 361 DDDDDVDDEAGVPPVIASKPKDAPKEEPADN--SPSKPAVTGTARGTLSTSKPSKGKRKL 418
Query: 1479 NSEESKATNTAPLKKVKSENDVKPVKEEITTPTTKHTVSSK--VAXXXXXXXXXXXXXXX 1652
N EE+KA N AP KKVK EN+ K ++ T+K+ SK
Sbjct: 419 N-EETKAANGAPPKKVKIENEPKSTVKDENGSTSKNNTPSKGVPPTPSSKGGSSSPIASG 477
Query: 1653 XVTADEIRAVLLHNQQVTTQDLVAKFKSRLKSKEDKDAFASILRRISRIKKQENGAAGYV 1832
V+ +EIRAVL+ +TTQDLVAKF++RL+ EDK AFA IL+RIS+I Q+ A+ YV
Sbjct: 478 PVSEEEIRAVLMQKTPLTTQDLVAKFRARLRCPEDKKAFADILKRISKI--QKTNASSYV 535
Query: 1833 VLRD 1844
+LRD
Sbjct: 536 ILRD 539
>gb|EMJ12738.1| hypothetical protein PRUPE_ppa003970mg [Prunus persica]
Length = 537
Score = 490 bits (1261), Expect = e-135
Identities = 276/543 (50%), Positives = 334/543 (61%), Gaps = 4/543 (0%)
Frame = +3
Query: 228 MSMDLILKPSCSVCGSTQELYGSTCKHLTLCVSCGKSMAEKRAKCYECGTIITRLIREYN 407
MS DL L+ SCS CGST ELYGS CKH+TLC+SCGK+MAE RAKC++CG I+TRLIREYN
Sbjct: 1 MSADLTLRSSCSGCGSTSELYGSNCKHMTLCLSCGKTMAENRAKCFDCGAIVTRLIREYN 60
Query: 408 VRACSNSDKNYFIGRFVSGLPNFSRKK-SENKWSLQKEGLQGRQVTDTLREKYKNKPWLL 584
VRA + +DKNYFIGRFV+GLP+FS+KK +ENKWSL KEGLQGRQ++DTLR+KYKNKPW+L
Sbjct: 61 VRASTVNDKNYFIGRFVTGLPSFSKKKNAENKWSLHKEGLQGRQLSDTLRDKYKNKPWVL 120
Query: 585 EDETG-TQFHGVLEGAQSATYYLLMLQGREFVAIPAASWYNFNKVAQYKQLTLEEAEEKM 761
EDETG +Q+ G LEGAQ+ATYYLLM QG+EF AIPA SW+NFNKVAQYKQLTLEEAEEK+
Sbjct: 121 EDETGQSQYQGHLEGAQTATYYLLMRQGKEFSAIPAGSWFNFNKVAQYKQLTLEEAEEKI 180
Query: 762 KNRRRTADGYQRWMMKAANNGAAAFGEVXXXXXXXXXXXXXXXXXXXXXXXXEAHVSDRG 941
KNR++TADGY+RWMMKAANNGAAAFGEV E +VSD+G
Sbjct: 181 KNRKKTADGYERWMMKAANNGAAAFGEVERFDKDNSVTSGKGRKKAGDDDDGEGNVSDKG 240
Query: 942 XXXXXXXXXRKNRLQLNKKXXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXXXXX 1121
RKNRL K WEH
Sbjct: 241 EEDEEEELARKNRLN-KKGGDDDDDDGARGADADLDDDDVEKGDDWEHEEIFTDDDEAVG 299
Query: 1122 XXXXXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXX 1301
L E+PAPPEIKQ
Sbjct: 300 NNPEEREDLELEVPAPPEIKQDDEDEDEDDKEGGLSKSGKELKKLLGRTGGLDDSDAEDD 359
Query: 1302 XXXXXXXXXXVS--PVLAPKQKEALKEEPTENTSNPSKPAASGSARGTPSTTKSGKGKRK 1475
+ APKQK+A KEEP++N +PSKP SGSARGTPST KS KGKRK
Sbjct: 360 DDDDDDMDDDIGFPQAAAPKQKDASKEEPSDN--SPSKPVPSGSARGTPSTAKSAKGKRK 417
Query: 1476 MNSEESKATNTAPLKKVKSENDVKPVKEEITTPTTKHTVSSKVAXXXXXXXXXXXXXXXX 1655
++++++K +N+AP KKVKSEN+ K +E +K + SK
Sbjct: 418 LSADDAKTSNSAPPKKVKSENEQKVSTKEEPASASKSSTPSK---GTPSVKVEPTSSSGP 474
Query: 1656 VTADEIRAVLLHNQQVTTQDLVAKFKSRLKSKEDKDAFASILRRISRIKKQENGAAGYVV 1835
VT +EIR VL+ VTTQDLVA+FK+RL+ +EDK AFA+ILR+IS+I+K NG++ YVV
Sbjct: 475 VTEEEIRTVLVQRTPVTTQDLVARFKARLRLQEDKTAFAAILRKISKIQKTTNGSS-YVV 533
Query: 1836 LRD 1844
LRD
Sbjct: 534 LRD 536
>gb|ESW19654.1| hypothetical protein PHAVU_006G143600g [Phaseolus vulgaris]
Length = 540
Score = 484 bits (1246), Expect = e-134
Identities = 282/545 (51%), Positives = 327/545 (60%), Gaps = 6/545 (1%)
Frame = +3
Query: 228 MSMDLILKPSCSVCGSTQELYGSTCKHLTLCVSCGKSMAEKRAKCYECGTIITRLIREYN 407
MS DL LK SCS CGST +LYGS CKH+TLC+SCGK+MAE RAKC +CG +TRLIREYN
Sbjct: 1 MSTDLQLKSSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENRAKCVDCGVTLTRLIREYN 60
Query: 408 VRACSNSDKNYFIGRFVSGLPNFSRKKS-ENKWSLQKEGLQGRQVTDTLREKYKNKPWLL 584
VRA S +DKNYFIGRF++GLP+FS+KKS ENKW+LQKEGL GRQ+TDTLREKYKNKPWLL
Sbjct: 61 VRASSTNDKNYFIGRFMTGLPDFSKKKSAENKWALQKEGLLGRQITDTLREKYKNKPWLL 120
Query: 585 EDETG-TQFHGVLEGAQSATYYLLMLQGREFVAIPAASWYNFNKVAQYKQLTLEEAEEKM 761
EDETG +Q+ G LEG+QSATYYLLM + +EFVAIPA SWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121 EDETGQSQYQGHLEGSQSATYYLLMKERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180
Query: 762 KNRRRTADGYQRWMMKAANNGAAAFGEVXXXXXXXXXXXXXXXXXXXXXXXXEAHVSDRG 941
KNR++TADGYQRWMMKAANNG AAFG+ E HVSD+G
Sbjct: 181 KNRKKTADGYQRWMMKAANNGPAAFGD-HGKFDEKESNTGGGRSRKKTGEEEEGHVSDKG 239
Query: 942 XXXXXXXXXRKNRLQLNKKXXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXXXXX 1121
RKNRL L K+ WEH
Sbjct: 240 EEDEDDESERKNRLGLYKRPADDDEEGPRGGDHDLEDDDVEKGDDWEHEEIFTDDDEAVG 299
Query: 1122 XXXXXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXX 1301
LAPE+PAPPEIKQ S
Sbjct: 300 NDPEEREDLAPEVPAPPEIKQDEEEEDEDNEEGGGLSKSGKELKKLLGKASGLNESDAED 359
Query: 1302 XXXXXXXXXXV---SPVLAPKQKEALKEEPTENTSNPSKPAASGSARGTPSTTKSGKGKR 1472
PV+A K K+A KEEP +N +PSKP A+G ARGTPS +KS KGKR
Sbjct: 360 EDDDDDDMDDEVGNPPVIATKTKDAPKEEPVDN--SPSKPTATGPARGTPS-SKSSKGKR 416
Query: 1473 KMNSEESKATNTAPLKKVKSENDVKPVKEEITTPTTKHTVSSK-VAXXXXXXXXXXXXXX 1649
K N EE K TNTA KKVK EN+ K +++ +K K
Sbjct: 417 KSN-EEVKPTNTATPKKVKQENEPKSSAKDVNGSASKSNAPPKGTPPSSSSKPGSSATAS 475
Query: 1650 XXVTADEIRAVLLHNQQVTTQDLVAKFKSRLKSKEDKDAFASILRRISRIKKQENGAAGY 1829
V+ +EIRAVL VTTQDLVAKFK+RL+S EDK AFA IL+RIS+I+K NG++ Y
Sbjct: 476 GPVSEEEIRAVLRQKTPVTTQDLVAKFKARLRSSEDKQAFAEILKRISKIQKTANGSS-Y 534
Query: 1830 VVLRD 1844
V+LRD
Sbjct: 535 VILRD 539
>ref|XP_004152016.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Cucumis sativus] gi|449517383|ref|XP_004165725.1|
PREDICTED: transcription initiation factor IIF subunit
alpha-like [Cucumis sativus]
Length = 538
Score = 484 bits (1245), Expect = e-134
Identities = 281/544 (51%), Positives = 329/544 (60%), Gaps = 6/544 (1%)
Frame = +3
Query: 228 MSMDLILKPSCSVCGSTQELYGSTCKHLTLCVSCGKSMAEKRAKCYECGTIITRLIREYN 407
MS DL+LK SCS CGST ELYGS CKH+TLC++CGK+MAE + KCY+CG +TRLIREYN
Sbjct: 1 MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60
Query: 408 VRACSNSDKNYFIGRFVSGLPNFSRKKS-ENKWSLQKEGLQGRQVTDTLREKYKNKPWLL 584
VRA +++DKNYFIGRF+SGLPNFS+K++ ENKWSL KEGLQGRQ++D LREKYKN+PWLL
Sbjct: 61 VRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLL 120
Query: 585 EDETGT-QFHGVLEGAQSATYYLLMLQGREFVAIPAASWYNFNKVAQYKQLTLEEAEEKM 761
EDETG QF G LEG+QSATYYLL+LQG+EF AIPA SWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121 EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180
Query: 762 KNRRRTADGYQRWMMKAANNGAAAFGEVXXXXXXXXXXXXXXXXXXXXXXXXEAHVSDRG 941
KNR++TADGY+RWMMKAA+NG AAFGEV E +VSDRG
Sbjct: 181 KNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRG 240
Query: 942 XXXXXXXXXRKNRLQLNKK--XXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXXX 1115
RKNRL L+KK WEH
Sbjct: 241 EEDEEEEAARKNRLGLSKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDET 300
Query: 1116 XXXXXXXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXX 1295
LAPE+PAPPEIKQ S
Sbjct: 301 TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG 360
Query: 1296 XXXXXXXXXXXXV--SPVLAPKQKEALKEEPTENTSNPSKPAASGSARGTPSTTKSGKGK 1469
+PVL KQK+ +KEE N +PSKP SGSA+GTPST K+ KGK
Sbjct: 361 EDDDDDDDVDEDTGGTPVLPSKQKDTVKEEAAAN--SPSKPTPSGSAKGTPSTAKTAKGK 418
Query: 1470 RKMNSEESKATNTAPLKKVKSENDVKPVKEEITTPTTKHTVSSKVAXXXXXXXXXXXXXX 1649
RK N E+ K ++AP KK+K+E + K E + PT+K T S
Sbjct: 419 RK-NGEDVK-PSSAPPKKMKTETESKATDEGV--PTSKSTASK---GAPASVKTEPSSHS 471
Query: 1650 XXVTADEIRAVLLHNQQVTTQDLVAKFKSRLKSKEDKDAFASILRRISRIKKQENGAAGY 1829
VT +EIRAVL VTTQDLVAKFK+RL++ EDK+AFA ILRRISRI+K NG Y
Sbjct: 472 GPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRTPEDKNAFAEILRRISRIQK-TNGGPSY 530
Query: 1830 VVLR 1841
VVLR
Sbjct: 531 VVLR 534
>ref|XP_006586768.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Glycine max]
Length = 536
Score = 477 bits (1228), Expect = e-132
Identities = 284/547 (51%), Positives = 327/547 (59%), Gaps = 8/547 (1%)
Frame = +3
Query: 228 MSMDLILKPSCSVCGSTQELYGSTCKHLTLCVSCGKSMAEKRAKCYECGTIITRLIREYN 407
MS DL LK SCS CGST +LYGS CKH+TLC+ CGK+MA KRAKC +CG +TRLIREYN
Sbjct: 1 MSTDLQLKSSCSGCGSTTDLYGSNCKHMTLCLGCGKTMAAKRAKCVDCGATLTRLIREYN 60
Query: 408 VRACSNSDKNYFIGRFVSGLPNFSRKKS-ENKWSLQKEGLQGRQVTDTLREKYKNKPWLL 584
VRA S +DKNYFIGRF++GLP+FS+KKS ENKWSLQK+GL GRQ+TDTLREKYKNKPWLL
Sbjct: 61 VRASSPNDKNYFIGRFINGLPDFSKKKSAENKWSLQKDGLHGRQITDTLREKYKNKPWLL 120
Query: 585 EDETG-TQFHGVLEGAQSATYYLLMLQGREFVAIPAASWYNFNKVAQYKQLTLEEAEEKM 761
EDETG +QF G LEG+QSATYYLLM + +EFVAIPA SWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121 EDETGQSQFQGHLEGSQSATYYLLMKERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180
Query: 762 KNRRRTADGYQRWMMKAANNGAAAFGEVXXXXXXXXXXXXXXXXXXXXXXXXEAHVSDRG 941
KNR++TADGYQRWMMKAANNG AAFGE E HVSD+G
Sbjct: 181 KNRKKTADGYQRWMMKAANNGPAAFGE-HGKFDDNESNTGGGRSHKKTDEDDEGHVSDKG 239
Query: 942 XXXXXXXXXRKNRLQLNKKXXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXXXXX 1121
RK+RL LNK+ WEH
Sbjct: 240 EEDEEEESERKSRLGLNKRAGEDDEEGPRGGDHDLDDDDVEKGDDWEHEEIFTDDDEAVG 299
Query: 1122 XXXXXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS---X 1292
LAPE+PAPPEIKQ S
Sbjct: 300 NDPEEREDLAPEVPAPPEIKQDEEEEDEDNEEGEGLSKSGKELKKLLGKASGLNESDAED 359
Query: 1293 XXXXXXXXXXXXXVSPVLAPKQKEALKEEPTENTSNPSKPAASGSARGTPSTTKSGKGKR 1472
V PV+A KQK+ALKEEP +N +PSKP A+G ARGTPS +KS KGKR
Sbjct: 360 DDDDDDDVDDDVGVPPVIATKQKDALKEEPIDN--SPSKPTATGPARGTPS-SKSSKGKR 416
Query: 1473 KMNSEESKATNTAPLKKVK--SENDVK-PVKEEITTPTTKHTVSSKVAXXXXXXXXXXXX 1643
K+N EE+K +NTA KK S DV + P +SSK
Sbjct: 417 KLN-EETKPSNTATPKKEPKLSAKDVNGSASKSSAPPKGTPPLSSK------GGSSTTTT 469
Query: 1644 XXXXVTADEIRAVLLHNQQVTTQDLVAKFKSRLKSKEDKDAFASILRRISRIKKQENGAA 1823
V+ +EIRAVL VTTQDLVAKFK+RL+ EDK AFA IL+RIS+I+K GA+
Sbjct: 470 ASGPVSEEEIRAVLRQKTPVTTQDLVAKFKARLRCSEDKQAFAEILKRISKIQKTTTGAS 529
Query: 1824 GYVVLRD 1844
YV+LRD
Sbjct: 530 -YVILRD 535
>ref|XP_002529600.1| tfiif-alpha, putative [Ricinus communis] gi|223530933|gb|EEF32792.1|
tfiif-alpha, putative [Ricinus communis]
Length = 584
Score = 472 bits (1214), Expect = e-130
Identities = 275/587 (46%), Positives = 331/587 (56%), Gaps = 48/587 (8%)
Frame = +3
Query: 228 MSMDLILKPSCSVCGSTQELYGSTCKHLTLCVSCGKSMAEKRAKCYECGTIITRLI---- 395
MS+DL LK SCS CGST +LYGS CKH+TLC++CGK+MAE R KC++CG IT+ +
Sbjct: 1 MSVDLQLKSSCSECGSTTDLYGSNCKHMTLCLNCGKTMAENRRKCFDCGVTITQRLLGLG 60
Query: 396 ----------------------------------------REYNVRACSNSDKNYFIGRF 455
+EYNVRA +SDKNYFIGRF
Sbjct: 61 SLSWAGHQVHVSLPINQFLNAGVDPKEISLPHEFILNWDTKEYNVRASPSSDKNYFIGRF 120
Query: 456 VSGLPNFSRKKS-ENKWSLQKEGLQGRQVTDTLREKYKNKPWLLEDETGT-QFHGVLEGA 629
V+GLP FS+KK+ ENKWS+ KEGLQGRQ+TD LREK+KNKPWLLEDETG Q+HG LEG+
Sbjct: 121 VTGLPIFSKKKNAENKWSIHKEGLQGRQLTDALREKFKNKPWLLEDETGQYQYHGHLEGS 180
Query: 630 QSATYYLLMLQGREFVAIPAASWYNFNKVAQYKQLTLEEAEEKMKNRRRTADGYQRWMMK 809
QSATYYLL+LQG+EFVAIPAASWYNFNKVAQYK LTLEEAEEKMKNRR+TADGY+RWMMK
Sbjct: 181 QSATYYLLILQGKEFVAIPAASWYNFNKVAQYKMLTLEEAEEKMKNRRKTADGYERWMMK 240
Query: 810 AANNGAAAFGEV-XXXXXXXXXXXXXXXXXXXXXXXXEAHVSDRGXXXXXXXXXRKNRLQ 986
AANNG AAFGE+ E +SD+G RKNRL
Sbjct: 241 AANNGPAAFGEMEKPDDKDVRTTSGRGRRKTAGDDDDEGKISDKGEEDEEEEMSRKNRLG 300
Query: 987 LNKKXXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXXXXXXXXXXXXXLAPEIPA 1166
LN++ WEH L PE+PA
Sbjct: 301 LNRQGGGDDDEGPRGGDHDMDDDDVEKGDDWEHEEIFTDDDEAVGNDPEERQDLGPELPA 360
Query: 1167 PPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXVSPVL 1346
PPEIKQ +SPVL
Sbjct: 361 PPEIKQDEDDEDEENEEGGLSKSGKELKALLGRSGGLDDTDAEDDDDDDMDEDTGLSPVL 420
Query: 1347 APKQKEA-LKEEPTENTSNPSKPAASGSARGTPSTTKSGKGKRKMNSEESKATNTAPLKK 1523
A KQK+A +KEEP +N +P+KP S SA+G S +KS KGKRK N ++ K +N +P KK
Sbjct: 421 AQKQKDAPIKEEPGDN--SPAKPMHSSSAKGALSASKSAKGKRKTNGDDGKTSNVSPQKK 478
Query: 1524 VKSENDVKPVKEEITTPTTKHTVSSKVAXXXXXXXXXXXXXXXXVTADEIRAVLLHNQQV 1703
VK+EN+ K + +E PT+K S+ VT +EI+AVLL N V
Sbjct: 479 VKTENESKHIVKEENVPTSKSKSSANPKGAAASLRTESTSSTGFVTDEEIKAVLLQNGPV 538
Query: 1704 TTQDLVAKFKSRLKSKEDKDAFASILRRISRIKKQENGAAGYVVLRD 1844
TTQDLVAKFKSRLK++EDK+AF L+RISRI+K G+ YVVLRD
Sbjct: 539 TTQDLVAKFKSRLKTREDKEAFTHTLKRISRIQKTSGGS--YVVLRD 583
>ref|XP_006857695.1| hypothetical protein AMTR_s00061p00167160 [Amborella trichopoda]
gi|548861791|gb|ERN19162.1| hypothetical protein
AMTR_s00061p00167160 [Amborella trichopoda]
Length = 558
Score = 468 bits (1205), Expect = e-129
Identities = 280/550 (50%), Positives = 324/550 (58%), Gaps = 11/550 (2%)
Frame = +3
Query: 228 MSMDLILKPSCSVCGSTQELYGSTCKHLTLCVSCGKSMAEKRAKCYECGTIITRLIREYN 407
MS DL+LK SC CGS +LYGS CKHLTLC SCGK+MAE R+KCYECGT ITRLIREYN
Sbjct: 12 MSGDLVLKSSCVGCGSNSDLYGSNCKHLTLCQSCGKTMAETRSKCYECGTPITRLIREYN 71
Query: 408 VRACSNSDKNYFIGRFVSGLPNFSRKKSEN-KWSLQKEGLQGRQVTDTLREKYKNKPWLL 584
VRA N+DK Y+I RFV GLP FSRKK+ + KW+LQKEGLQGRQVT++LREK+KNKPWLL
Sbjct: 72 VRANVNTDKTYYISRFVMGLPGFSRKKNGDVKWTLQKEGLQGRQVTESLREKFKNKPWLL 131
Query: 585 EDETGT-QFHGVLEGAQSATYYLLMLQGREFVAIPAASWYNFNKVAQYKQLTLEEAEEKM 761
EDETG Q+HG LEGAQSATYYLL QG+EFVAIPA SWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 132 EDETGQHQYHGQLEGAQSATYYLLTNQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 191
Query: 762 KNRRRTADGYQRWMMKAANNGAAAFG--EVXXXXXXXXXXXXXXXXXXXXXXXXEAHVSD 935
KNRR+ A+GY+RW+MKAANNGA+AF E +A SD
Sbjct: 192 KNRRKNAEGYERWIMKAANNGASAFRDMEKIDGSGGNGGASGGRRRKGSGDEDDDAVRSD 251
Query: 936 RGXXXXXXXXXRKNRLQLNKK-XXXXXXXXXXXXXXXXXXXXXXXXXXWEHXXXXXXXXX 1112
R RKNRL LNKK WEH
Sbjct: 252 REGEDDDDEEARKNRLGLNKKTFDDEGEEVPRGDDHDFDDDDIEKGDDWEHEEIFTDDDE 311
Query: 1113 XXXXXXXXXXXLAPEIPAPPEIKQ---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1283
APE+PAPPEIKQ
Sbjct: 312 AVGNDPEEREDFAPEVPAPPEIKQDDEDEDEGNEDEEGGLSKSGRELKKLLGRAGGLNES 371
Query: 1284 XSXXXXXXXXXXXXXXVSPVLAPKQKEALKEEPTENTSNPSKPAASGSARGTPSTTKSGK 1463
S VLAPKQKE +KEEP +N +P+K A SGS RGTPST+KS K
Sbjct: 372 DGDDDDDDDDLDDDMGTSSVLAPKQKE-VKEEPVDN--SPTKTATSGSNRGTPSTSKSTK 428
Query: 1464 GKRKMNSEESKATNTAPLKKVKSENDVKP---VKEEITTPTTKHTVSSKVAXXXXXXXXX 1634
KRK S+++K +AP KK K END KP VK+E + +T +
Sbjct: 429 AKRKSGSDDAKPAASAPSKKPKIENDSKPATTVKDEPASAQRSNTPVKLPSSSGTKPAGS 488
Query: 1635 XXXXXXXVTADEIRAVLLHNQQVTTQDLVAKFKSRLKSKEDKDAFASILRRISRIKKQEN 1814
VT DEIRAVLL VTTQDLV KFK+RL++KEDKD+FA++L++ISRI+K N
Sbjct: 489 PVAAAVPVTEDEIRAVLLQMAPVTTQDLVGKFKARLRTKEDKDSFAAVLKKISRIQK-TN 547
Query: 1815 GAAGYVVLRD 1844
G A +VVLRD
Sbjct: 548 GGANFVVLRD 557
>ref|XP_002872663.1| mutant TFIIF-alpha [Arabidopsis lyrata subsp. lyrata]
gi|297318500|gb|EFH48922.1| mutant TFIIF-alpha
[Arabidopsis lyrata subsp. lyrata]
Length = 619
Score = 461 bits (1187), Expect = e-127
Identities = 270/546 (49%), Positives = 321/546 (58%), Gaps = 7/546 (1%)
Frame = +3
Query: 228 MSMDLILKPSCSVCGSTQELYGSTCKHLTLCVSCGKSMAEKRAKCYECGTIITRLIREYN 407
MS L LKP+C CGS +LYGS+C+H+TLC+ CG++MAE +AKC +CGT++TRLIREYN
Sbjct: 1 MSNCLQLKPACMGCGSQSDLYGSSCRHMTLCLKCGRTMAENKAKCLDCGTVLTRLIREYN 60
Query: 408 VRACSNSDKNYFIGRFVSGLPNFSRKKSENKWSLQKEGLQGRQVTDTLREKYKNKPWLLE 587
VRA + +DKNYFIGRFV+GLPNF +K SENKWSL+K+ QGRQ TD REK KNKPW+LE
Sbjct: 61 VRAAAPTDKNYFIGRFVTGLPNF-KKGSENKWSLRKDIPQGRQFTDAQREKLKNKPWILE 119
Query: 588 DETGT-QFHGVLEGAQSATYYLLMLQGREFVAIPAASWYNFNKVAQYKQLTLEEAEEKMK 764
DETG Q+ G LEG+QSATYYLL++Q +EFVAIPA SWYNFNKVAQYKQLTLEEAEEKMK
Sbjct: 120 DETGQFQYQGHLEGSQSATYYLLVMQNKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMK 179
Query: 765 NRRRTADGYQRWMMKAANNGAAAFGEV--XXXXXXXXXXXXXXXXXXXXXXXXEAHVSDR 938
NRR+TADGYQRWMMKAANNG A FGEV E +VSDR
Sbjct: 180 NRRKTADGYQRWMMKAANNGPALFGEVDNDKESGGSSGGGGRGRKKSSGGDEDEGNVSDR 239
Query: 939 GXXXXXXXXXRKNRLQLNKKXXXXXXXXXXXXXXXXXXXXXXXXXXWEH-XXXXXXXXXX 1115
G RK+RL LNKK WEH
Sbjct: 240 GEEDEEEEASRKSRLGLNKKSNDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAV 299
Query: 1116 XXXXXXXXXXLAPEIPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXX 1295
LAPEIPAPPEIKQ
Sbjct: 300 GNDPEEREDLLAPEIPAPPEIKQDEDDEENEEEEGGLSKSGKELKKLLGKANGLNESDED 359
Query: 1296 XXXXXXXXXXXXVSPVLAPKQKEALKEEPTENTSNPSKPAASGSARGTPSTTKSGKGKRK 1475
PV KQKE KEEP EN P+KP SG +RGTP K KGKRK
Sbjct: 360 DDDDSDDEEETNFGPVTNSKQKEVAKEEPVENA--PAKPTPSGPSRGTP-PAKPSKGKRK 416
Query: 1476 MNSEESKATNTAPLKKVKSENDVK-PVKEEITTPTTKHTVSSKV--AXXXXXXXXXXXXX 1646
+N +SK +++ KKVK+END K VKEE +K +K A
Sbjct: 417 LNDGDSKKPSSSVQKKVKTENDPKSSVKEERANTVSKSNTPTKAVKAEPASAPAASSSAA 476
Query: 1647 XXXVTADEIRAVLLHNQQVTTQDLVAKFKSRLKSKEDKDAFASILRRISRIKKQENGAAG 1826
VT DEIRAVL+ +QVTTQDLV++FK+RLK+KEDK+AFA+ILR+IS+I+K G+
Sbjct: 477 TGPVTEDEIRAVLMEKKQVTTQDLVSRFKARLKTKEDKNAFANILRKISKIQKNA-GSQN 535
Query: 1827 YVVLRD 1844
+VVLR+
Sbjct: 536 FVVLRE 541