BLASTX nr result

ID: Rauwolfia21_contig00005038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00005038
         (392 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006348272.1| PREDICTED: 30S ribosomal protein S20, chloro...    59   9e-07
ref|XP_006451780.1| hypothetical protein CICLE_v10009636mg [Citr...    59   9e-07
gb|EOY13090.1| 30S ribosomal protein S20 isoform 3 [Theobroma ca...    59   9e-07
gb|EOY13088.1| 30S ribosomal protein S20 isoform 1 [Theobroma ca...    59   9e-07
ref|XP_004244249.1| PREDICTED: 30S ribosomal protein S20, chloro...    59   9e-07
ref|XP_002532240.1| 30S ribosomal protein S20, putative [Ricinus...    59   9e-07
ref|XP_002285149.1| PREDICTED: 30S ribosomal protein S20, chloro...    59   9e-07
gb|EXC08476.1| hypothetical protein L484_009619 [Morus notabilis]      58   1e-06
ref|XP_004510023.1| PREDICTED: 30S ribosomal protein S20, chloro...    58   1e-06
ref|XP_004510022.1| PREDICTED: 30S ribosomal protein S20, chloro...    58   1e-06
gb|EMJ13317.1| hypothetical protein PRUPE_ppa012008mg [Prunus pe...    58   1e-06
ref|XP_003628554.1| 30S ribosomal protein S20 [Medicago truncatu...    58   1e-06
ref|XP_002329074.1| predicted protein [Populus trichocarpa] gi|5...    58   1e-06
gb|AFK46331.1| unknown [Lotus japonicus] gi|388517753|gb|AFK4693...    57   3e-06
gb|AFK39838.1| unknown [Lotus japonicus]                               57   3e-06
ref|NP_001241947.1| uncharacterized protein LOC100786192 [Glycin...    57   3e-06
ref|NP_001237852.1| uncharacterized protein LOC100499656 [Glycin...    57   3e-06
gb|ABK24542.1| unknown [Picea sitchensis]                              56   4e-06
gb|ABK23997.1| unknown [Picea sitchensis] gi|116793101|gb|ABK266...    56   4e-06

>ref|XP_006348272.1| PREDICTED: 30S ribosomal protein S20, chloroplastic-like [Solanum
           tuberosum]
          Length = 184

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/42 (66%), Positives = 29/42 (69%)
 Frame = -3

Query: 390 EAYSVIDKAVKVGTLHRNTGXXXXXXXXXXXXAIEIHHGWYV 265
           EAYS IDKAVKVGTLHRNTG            A+EIHHGWYV
Sbjct: 130 EAYSAIDKAVKVGTLHRNTGARRKSRLARRKKAVEIHHGWYV 171


>ref|XP_006451780.1| hypothetical protein CICLE_v10009636mg [Citrus clementina]
           gi|568820617|ref|XP_006464806.1| PREDICTED: 30S
           ribosomal protein S20, chloroplastic-like [Citrus
           sinensis] gi|557555006|gb|ESR65020.1| hypothetical
           protein CICLE_v10009636mg [Citrus clementina]
          Length = 185

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/41 (68%), Positives = 29/41 (70%)
 Frame = -3

Query: 390 EAYSVIDKAVKVGTLHRNTGXXXXXXXXXXXXAIEIHHGWY 268
           EAYSVIDKAVKVGTLHRNTG            A+EIHHGWY
Sbjct: 136 EAYSVIDKAVKVGTLHRNTGARRKSRLARRKKAVEIHHGWY 176


>gb|EOY13090.1| 30S ribosomal protein S20 isoform 3 [Theobroma cacao]
          Length = 186

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/41 (68%), Positives = 29/41 (70%)
 Frame = -3

Query: 390 EAYSVIDKAVKVGTLHRNTGXXXXXXXXXXXXAIEIHHGWY 268
           EAYSVIDKAVKVGTLHRNTG            A+EIHHGWY
Sbjct: 137 EAYSVIDKAVKVGTLHRNTGARRKSRLARRKKAVEIHHGWY 177


>gb|EOY13088.1| 30S ribosomal protein S20 isoform 1 [Theobroma cacao]
          Length = 193

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/41 (68%), Positives = 29/41 (70%)
 Frame = -3

Query: 390 EAYSVIDKAVKVGTLHRNTGXXXXXXXXXXXXAIEIHHGWY 268
           EAYSVIDKAVKVGTLHRNTG            A+EIHHGWY
Sbjct: 144 EAYSVIDKAVKVGTLHRNTGARRKSRLARRKKAVEIHHGWY 184


>ref|XP_004244249.1| PREDICTED: 30S ribosomal protein S20, chloroplastic-like [Solanum
           lycopersicum]
          Length = 184

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/42 (66%), Positives = 29/42 (69%)
 Frame = -3

Query: 390 EAYSVIDKAVKVGTLHRNTGXXXXXXXXXXXXAIEIHHGWYV 265
           EAYS IDKAVKVGTLHRNTG            A+EIHHGWYV
Sbjct: 130 EAYSAIDKAVKVGTLHRNTGARRKSRLARRKKAVEIHHGWYV 171


>ref|XP_002532240.1| 30S ribosomal protein S20, putative [Ricinus communis]
           gi|223528058|gb|EEF30134.1| 30S ribosomal protein S20,
           putative [Ricinus communis]
          Length = 185

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/41 (68%), Positives = 29/41 (70%)
 Frame = -3

Query: 390 EAYSVIDKAVKVGTLHRNTGXXXXXXXXXXXXAIEIHHGWY 268
           EAYSVIDKAVKVGTLHRNTG            A+EIHHGWY
Sbjct: 135 EAYSVIDKAVKVGTLHRNTGARRKSRLARRKKAVEIHHGWY 175


>ref|XP_002285149.1| PREDICTED: 30S ribosomal protein S20, chloroplastic [Vitis
           vinifera] gi|302142967|emb|CBI20262.3| unnamed protein
           product [Vitis vinifera]
          Length = 183

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/41 (68%), Positives = 29/41 (70%)
 Frame = -3

Query: 390 EAYSVIDKAVKVGTLHRNTGXXXXXXXXXXXXAIEIHHGWY 268
           EAYSVIDKAVKVGTLHRNTG            A+EIHHGWY
Sbjct: 135 EAYSVIDKAVKVGTLHRNTGARRKSRLARRKKAVEIHHGWY 175


>gb|EXC08476.1| hypothetical protein L484_009619 [Morus notabilis]
          Length = 180

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/41 (65%), Positives = 29/41 (70%)
 Frame = -3

Query: 390 EAYSVIDKAVKVGTLHRNTGXXXXXXXXXXXXAIEIHHGWY 268
           EAYS+IDKAVKVGTLHRNTG            A+EIHHGWY
Sbjct: 132 EAYSIIDKAVKVGTLHRNTGARRKSRLARRKKAVEIHHGWY 172


>ref|XP_004510023.1| PREDICTED: 30S ribosomal protein S20, chloroplastic-like isoform X2
           [Cicer arietinum]
          Length = 172

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/41 (65%), Positives = 29/41 (70%)
 Frame = -3

Query: 390 EAYSVIDKAVKVGTLHRNTGXXXXXXXXXXXXAIEIHHGWY 268
           EAYS+IDKAVKVGTLHRNTG            A+EIHHGWY
Sbjct: 124 EAYSIIDKAVKVGTLHRNTGANRKSRLARRKKAVEIHHGWY 164


>ref|XP_004510022.1| PREDICTED: 30S ribosomal protein S20, chloroplastic-like isoform X1
           [Cicer arietinum]
          Length = 172

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/41 (65%), Positives = 29/41 (70%)
 Frame = -3

Query: 390 EAYSVIDKAVKVGTLHRNTGXXXXXXXXXXXXAIEIHHGWY 268
           EAYS+IDKAVKVGTLHRNTG            A+EIHHGWY
Sbjct: 124 EAYSIIDKAVKVGTLHRNTGANRKSRLARRKKAVEIHHGWY 164


>gb|EMJ13317.1| hypothetical protein PRUPE_ppa012008mg [Prunus persica]
          Length = 187

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/41 (65%), Positives = 29/41 (70%)
 Frame = -3

Query: 390 EAYSVIDKAVKVGTLHRNTGXXXXXXXXXXXXAIEIHHGWY 268
           EAYS+IDKAVKVGTLHRNTG            A+EIHHGWY
Sbjct: 139 EAYSIIDKAVKVGTLHRNTGARRKSRLARRKKAVEIHHGWY 179


>ref|XP_003628554.1| 30S ribosomal protein S20 [Medicago truncatula]
           gi|355522576|gb|AET03030.1| 30S ribosomal protein S20
           [Medicago truncatula]
          Length = 173

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/41 (65%), Positives = 29/41 (70%)
 Frame = -3

Query: 390 EAYSVIDKAVKVGTLHRNTGXXXXXXXXXXXXAIEIHHGWY 268
           EAYS+IDKAVKVGTLHRNTG            A+EIHHGWY
Sbjct: 125 EAYSIIDKAVKVGTLHRNTGANRKSRLARRKKAVEIHHGWY 165


>ref|XP_002329074.1| predicted protein [Populus trichocarpa]
           gi|566153920|ref|XP_006370215.1| chloroplast 30S
           ribosomal protein S20 [Populus trichocarpa]
           gi|550349394|gb|ERP66784.1| chloroplast 30S ribosomal
           protein S20 [Populus trichocarpa]
          Length = 182

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/41 (65%), Positives = 29/41 (70%)
 Frame = -3

Query: 390 EAYSVIDKAVKVGTLHRNTGXXXXXXXXXXXXAIEIHHGWY 268
           EAYSVIDKA+KVGTLHRNTG            A+EIHHGWY
Sbjct: 132 EAYSVIDKAIKVGTLHRNTGARRKSRLARRKKAVEIHHGWY 172


>gb|AFK46331.1| unknown [Lotus japonicus] gi|388517753|gb|AFK46938.1| unknown
           [Lotus japonicus]
          Length = 177

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/41 (60%), Positives = 28/41 (68%)
 Frame = -3

Query: 390 EAYSVIDKAVKVGTLHRNTGXXXXXXXXXXXXAIEIHHGWY 268
           EAYSVIDKA++VGTLHRNTG             +EIHHGWY
Sbjct: 129 EAYSVIDKAIRVGTLHRNTGGHRKSRLARRKKVVEIHHGWY 169


>gb|AFK39838.1| unknown [Lotus japonicus]
          Length = 79

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/41 (60%), Positives = 28/41 (68%)
 Frame = -3

Query: 390 EAYSVIDKAVKVGTLHRNTGXXXXXXXXXXXXAIEIHHGWY 268
           EAYSVIDKA++VGTLHRNTG             +EIHHGWY
Sbjct: 31  EAYSVIDKAIRVGTLHRNTGGHRKPRLARRKKVVEIHHGWY 71


>ref|NP_001241947.1| uncharacterized protein LOC100786192 [Glycine max]
           gi|255640470|gb|ACU20521.1| unknown [Glycine max]
          Length = 164

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/41 (63%), Positives = 29/41 (70%)
 Frame = -3

Query: 390 EAYSVIDKAVKVGTLHRNTGXXXXXXXXXXXXAIEIHHGWY 268
           EAYS+IDKAV+VGTLHRNTG            A+EIHHGWY
Sbjct: 116 EAYSIIDKAVRVGTLHRNTGANRKSRLARRKKAVEIHHGWY 156


>ref|NP_001237852.1| uncharacterized protein LOC100499656 [Glycine max]
           gi|255625577|gb|ACU13133.1| unknown [Glycine max]
          Length = 180

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/41 (63%), Positives = 29/41 (70%)
 Frame = -3

Query: 390 EAYSVIDKAVKVGTLHRNTGXXXXXXXXXXXXAIEIHHGWY 268
           EAYS+IDKAV+VGTLHRNTG            A+EIHHGWY
Sbjct: 132 EAYSIIDKAVRVGTLHRNTGANRKSRLARRKKAVEIHHGWY 172


>gb|ABK24542.1| unknown [Picea sitchensis]
          Length = 178

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 27/41 (65%), Positives = 28/41 (68%)
 Frame = -3

Query: 390 EAYSVIDKAVKVGTLHRNTGXXXXXXXXXXXXAIEIHHGWY 268
           EAYS IDKAVKVGTLHRNTG            A+EIHHGWY
Sbjct: 132 EAYSSIDKAVKVGTLHRNTGGHRKSRLSRRKKAVEIHHGWY 172


>gb|ABK23997.1| unknown [Picea sitchensis] gi|116793101|gb|ABK26614.1| unknown
           [Picea sitchensis]
          Length = 178

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/41 (63%), Positives = 27/41 (65%)
 Frame = -3

Query: 390 EAYSVIDKAVKVGTLHRNTGXXXXXXXXXXXXAIEIHHGWY 268
           EAYS IDKAVKVGTLHRNTG             +EIHHGWY
Sbjct: 132 EAYSSIDKAVKVGTLHRNTGGHRKSRLSRRKKVVEIHHGWY 172


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