BLASTX nr result
ID: Rauwolfia21_contig00005010
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00005010
(889 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006360109.1| PREDICTED: glycine-rich RNA-binding protein ... 147 4e-33
gb|EPS66753.1| hypothetical protein M569_08025, partial [Genlise... 144 4e-32
ref|XP_004244174.1| PREDICTED: nucleolin-like isoform 1 [Solanum... 144 4e-32
ref|XP_002319264.1| predicted protein [Populus trichocarpa] gi|1... 141 3e-31
ref|NP_200269.1| RNA recognition motif-containing protein [Arabi... 140 8e-31
ref|XP_002864345.1| RNA recognition motif-containing protein [Ar... 140 8e-31
gb|AFK43918.1| unknown [Lotus japonicus] 139 1e-30
ref|XP_002316957.1| RNA-binding family protein [Populus trichoca... 139 1e-30
gb|EOY12680.1| RNA-binding family protein [Theobroma cacao] 138 2e-30
ref|XP_006281245.1| hypothetical protein CARUB_v10027288mg [Caps... 138 2e-30
ref|XP_006401559.1| hypothetical protein EUTSA_v10014908mg [Eutr... 138 3e-30
ref|XP_002445020.1| hypothetical protein SORBIDRAFT_07g002960 [S... 136 1e-29
ref|XP_004294323.1| PREDICTED: nucleolin-like [Fragaria vesca su... 135 2e-29
gb|EMJ13415.1| hypothetical protein PRUPE_ppa013115mg [Prunus pe... 135 2e-29
gb|EAZ04269.1| hypothetical protein OsI_26412 [Oryza sativa Indi... 135 2e-29
ref|XP_003562947.1| PREDICTED: uncharacterized RNA-binding prote... 135 2e-29
ref|NP_001059935.1| Os07g0549800 [Oryza sativa Japonica Group] g... 135 3e-29
ref|XP_004972888.1| PREDICTED: nucleolin-like [Setaria italica] 134 3e-29
ref|XP_006659102.1| PREDICTED: glycine-rich RNA-binding protein ... 134 4e-29
ref|XP_002530915.1| RNA binding protein, putative [Ricinus commu... 134 4e-29
>ref|XP_006360109.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
[Solanum tuberosum]
Length = 157
Score = 147 bits (372), Expect = 4e-33
Identities = 77/110 (70%), Positives = 85/110 (77%), Gaps = 1/110 (0%)
Frame = +2
Query: 98 PSGLRALLFS-TSGFPFNXXXXXXXXXXXXXXSTNLFVSGLNKRTTTEGLRAAFAKFGDV 274
P GLRALL + +S FPFN STNLFVSGL+KRTT+EGLR AF K G+V
Sbjct: 19 PRGLRALLSTFSSSFPFNTPSKQVEKPPPAEPSTNLFVSGLSKRTTSEGLREAFVKHGEV 78
Query: 275 VDAKVVTDRVSGYSKGFGFVRYATIEEAGKGITGMDGQFLDGWVIFAEYA 424
V A+VVTDRVSGYSKGFGFVRYAT+E+A GI GMDGQFLDGWVIFAEYA
Sbjct: 79 VHARVVTDRVSGYSKGFGFVRYATLEDAEAGIKGMDGQFLDGWVIFAEYA 128
>gb|EPS66753.1| hypothetical protein M569_08025, partial [Genlisea aurea]
Length = 151
Score = 144 bits (363), Expect = 4e-32
Identities = 74/118 (62%), Positives = 85/118 (72%)
Frame = +2
Query: 107 LRALLFSTSGFPFNXXXXXXXXXXXXXXSTNLFVSGLNKRTTTEGLRAAFAKFGDVVDAK 286
L L +++ FPFN STNLFVSGL+KRTTTEGLR AFAKFG+VV+A+
Sbjct: 24 LAVSLSTSTNFPFNLPQSKVEKPPPAEPSTNLFVSGLSKRTTTEGLRDAFAKFGEVVNAR 83
Query: 287 VVTDRVSGYSKGFGFVRYATIEEAGKGITGMDGQFLDGWVIFAEYAXXXXXXXXXENA 460
VVTDRVSG+SKGFGFV+YAT+E+A GI GMDGQFLDGWVIFAEYA NA
Sbjct: 84 VVTDRVSGHSKGFGFVKYATLEDAESGIKGMDGQFLDGWVIFAEYARPRPPIPSLNNA 141
>ref|XP_004244174.1| PREDICTED: nucleolin-like isoform 1 [Solanum lycopersicum]
Length = 151
Score = 144 bits (363), Expect = 4e-32
Identities = 76/108 (70%), Positives = 83/108 (76%), Gaps = 1/108 (0%)
Frame = +2
Query: 104 GLRALLFSTS-GFPFNXXXXXXXXXXXXXXSTNLFVSGLNKRTTTEGLRAAFAKFGDVVD 280
GLRALL + S FPFN STNLFVSGL+KRTT+EGLR AF K G+VV
Sbjct: 15 GLRALLSTFSPSFPFNTPSKQVEKPPPAEPSTNLFVSGLSKRTTSEGLREAFVKHGEVVH 74
Query: 281 AKVVTDRVSGYSKGFGFVRYATIEEAGKGITGMDGQFLDGWVIFAEYA 424
A+VVTDRVSGYSKGFGFVRYAT+E+A GI GMDGQFLDGWVIFAEYA
Sbjct: 75 ARVVTDRVSGYSKGFGFVRYATLEDAEAGIKGMDGQFLDGWVIFAEYA 122
>ref|XP_002319264.1| predicted protein [Populus trichocarpa] gi|118487492|gb|ABK95573.1|
unknown [Populus trichocarpa]
Length = 149
Score = 141 bits (356), Expect = 3e-31
Identities = 76/130 (58%), Positives = 87/130 (66%), Gaps = 4/130 (3%)
Frame = +2
Query: 104 GLRALLFSTS----GFPFNXXXXXXXXXXXXXXSTNLFVSGLNKRTTTEGLRAAFAKFGD 271
GL LL +TS FPF +TNLFVSGL+KRTTTEGL+ AF+KFG+
Sbjct: 20 GLLRLLSTTSTLSSSFPFPQTTQQTPAREQAEPNTNLFVSGLSKRTTTEGLQEAFSKFGE 79
Query: 272 VVDAKVVTDRVSGYSKGFGFVRYATIEEAGKGITGMDGQFLDGWVIFAEYAXXXXXXXXX 451
VV AKVVTDR SGYSKGFGFVRY T+E+A +GI GMDGQFLDGWVIFAEYA
Sbjct: 80 VVQAKVVTDRTSGYSKGFGFVRYGTLEDAAEGIKGMDGQFLDGWVIFAEYARPKQPPSQP 139
Query: 452 ENAVQSGGAN 481
+N + G N
Sbjct: 140 QNNMGPGYGN 149
>ref|NP_200269.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|9758950|dbj|BAB09337.1| unnamed protein product
[Arabidopsis thaliana] gi|18175762|gb|AAL59923.1|
unknown protein [Arabidopsis thaliana]
gi|20465513|gb|AAM20239.1| unknown protein [Arabidopsis
thaliana] gi|21553374|gb|AAM62467.1| unknown
[Arabidopsis thaliana] gi|332009129|gb|AED96512.1| RNA
recognition motif-containing protein [Arabidopsis
thaliana]
Length = 156
Score = 140 bits (352), Expect = 8e-31
Identities = 66/78 (84%), Positives = 74/78 (94%)
Frame = +2
Query: 191 STNLFVSGLNKRTTTEGLRAAFAKFGDVVDAKVVTDRVSGYSKGFGFVRYATIEEAGKGI 370
STNLFVSGL+KRTT+EGLR AFA+FG+V DAKVVTDRVSGYSKGFGFVRYAT+E++ KGI
Sbjct: 55 STNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLEDSAKGI 114
Query: 371 TGMDGQFLDGWVIFAEYA 424
GMDG+FLDGWVIFAEYA
Sbjct: 115 AGMDGKFLDGWVIFAEYA 132
>ref|XP_002864345.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata] gi|297310180|gb|EFH40604.1| RNA recognition
motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 156
Score = 140 bits (352), Expect = 8e-31
Identities = 66/78 (84%), Positives = 74/78 (94%)
Frame = +2
Query: 191 STNLFVSGLNKRTTTEGLRAAFAKFGDVVDAKVVTDRVSGYSKGFGFVRYATIEEAGKGI 370
STNLFVSGL+KRTT+EGLR AFA+FG+V DAKVVTDRVSGYSKGFGFVRYAT+E++ KGI
Sbjct: 55 STNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLEDSAKGI 114
Query: 371 TGMDGQFLDGWVIFAEYA 424
GMDG+FLDGWVIFAEYA
Sbjct: 115 AGMDGKFLDGWVIFAEYA 132
>gb|AFK43918.1| unknown [Lotus japonicus]
Length = 141
Score = 139 bits (351), Expect = 1e-30
Identities = 75/111 (67%), Positives = 81/111 (72%), Gaps = 2/111 (1%)
Frame = +2
Query: 98 PSGLRALLFSTSGFPFNXXXXXXXXXXXXXX--STNLFVSGLNKRTTTEGLRAAFAKFGD 271
P GLR L + S P + STNLFVSGLNKRTTTE LR FAKFG+
Sbjct: 10 PRGLRRLFCTNSTSPSSPFTLTGPPTTRQMGEPSTNLFVSGLNKRTTTEKLREEFAKFGE 69
Query: 272 VVDAKVVTDRVSGYSKGFGFVRYATIEEAGKGITGMDGQFLDGWVIFAEYA 424
VV A+VVTDRVSGYSKGFGFV+YATIEEA KGI GMDG+FLDGWVIFAEYA
Sbjct: 70 VVHARVVTDRVSGYSKGFGFVKYATIEEASKGIQGMDGKFLDGWVIFAEYA 120
>ref|XP_002316957.1| RNA-binding family protein [Populus trichocarpa]
gi|222860022|gb|EEE97569.1| RNA-binding family protein
[Populus trichocarpa]
Length = 153
Score = 139 bits (351), Expect = 1e-30
Identities = 68/100 (68%), Positives = 80/100 (80%)
Frame = +2
Query: 125 STSGFPFNXXXXXXXXXXXXXXSTNLFVSGLNKRTTTEGLRAAFAKFGDVVDAKVVTDRV 304
S+S FPF +TNLFVSGL+KRTT+EGL+ AF+KFG+VV A+VVTDRV
Sbjct: 32 SSSSFPFPQTTQQTPAREQAEPNTNLFVSGLSKRTTSEGLQEAFSKFGEVVQARVVTDRV 91
Query: 305 SGYSKGFGFVRYATIEEAGKGITGMDGQFLDGWVIFAEYA 424
SGYSKGFGFV+YAT+E+A +GI GMDGQFLDGWVIFAEYA
Sbjct: 92 SGYSKGFGFVKYATLEDAAEGIKGMDGQFLDGWVIFAEYA 131
>gb|EOY12680.1| RNA-binding family protein [Theobroma cacao]
Length = 156
Score = 138 bits (348), Expect = 2e-30
Identities = 70/97 (72%), Positives = 75/97 (77%)
Frame = +2
Query: 191 STNLFVSGLNKRTTTEGLRAAFAKFGDVVDAKVVTDRVSGYSKGFGFVRYATIEEAGKGI 370
STNLFVSGLNKRTT E LR AF++FG VVDA+VVTDRVSGYSKGFGFVRYAT+EEA KG
Sbjct: 55 STNLFVSGLNKRTTMEKLREAFSQFGQVVDARVVTDRVSGYSKGFGFVRYATLEEAEKGR 114
Query: 371 TGMDGQFLDGWVIFAEYAXXXXXXXXXENAVQSGGAN 481
GMDG+FLDGWVIFAEYA N S G N
Sbjct: 115 EGMDGKFLDGWVIFAEYARPRPERTPQNNMTNSNGYN 151
>ref|XP_006281245.1| hypothetical protein CARUB_v10027288mg [Capsella rubella]
gi|482549949|gb|EOA14143.1| hypothetical protein
CARUB_v10027288mg [Capsella rubella]
Length = 156
Score = 138 bits (348), Expect = 2e-30
Identities = 65/78 (83%), Positives = 73/78 (93%)
Frame = +2
Query: 191 STNLFVSGLNKRTTTEGLRAAFAKFGDVVDAKVVTDRVSGYSKGFGFVRYATIEEAGKGI 370
STNLFVSGL+KRTT+EGLR AFA+FG+V DAKVVTDRVSGYSKGFGFVRY T+E++ KGI
Sbjct: 55 STNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYTTLEDSAKGI 114
Query: 371 TGMDGQFLDGWVIFAEYA 424
GMDG+FLDGWVIFAEYA
Sbjct: 115 AGMDGKFLDGWVIFAEYA 132
>ref|XP_006401559.1| hypothetical protein EUTSA_v10014908mg [Eutrema salsugineum]
gi|557102649|gb|ESQ43012.1| hypothetical protein
EUTSA_v10014908mg [Eutrema salsugineum]
Length = 156
Score = 138 bits (347), Expect = 3e-30
Identities = 65/78 (83%), Positives = 73/78 (93%)
Frame = +2
Query: 191 STNLFVSGLNKRTTTEGLRAAFAKFGDVVDAKVVTDRVSGYSKGFGFVRYATIEEAGKGI 370
STNLFVSGL+KRTT+EGLR AFA+FG+V DAKVVTDRVSGYSKGFGFVRY T+E++ KGI
Sbjct: 55 STNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYMTLEDSAKGI 114
Query: 371 TGMDGQFLDGWVIFAEYA 424
GMDG+FLDGWVIFAEYA
Sbjct: 115 AGMDGKFLDGWVIFAEYA 132
>ref|XP_002445020.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor]
gi|241941370|gb|EES14515.1| hypothetical protein
SORBIDRAFT_07g002960 [Sorghum bicolor]
Length = 140
Score = 136 bits (342), Expect = 1e-29
Identities = 67/78 (85%), Positives = 72/78 (92%)
Frame = +2
Query: 191 STNLFVSGLNKRTTTEGLRAAFAKFGDVVDAKVVTDRVSGYSKGFGFVRYATIEEAGKGI 370
S NLFVSGL+KRTTTEGLR AFAKFG+VV A+VVTDRVSG+SKGFGFVRYAT EEA KGI
Sbjct: 34 SPNLFVSGLSKRTTTEGLRDAFAKFGEVVHARVVTDRVSGFSKGFGFVRYATTEEATKGI 93
Query: 371 TGMDGQFLDGWVIFAEYA 424
GMDG+FLDGWVIFAEYA
Sbjct: 94 EGMDGKFLDGWVIFAEYA 111
>ref|XP_004294323.1| PREDICTED: nucleolin-like [Fragaria vesca subsp. vesca]
Length = 141
Score = 135 bits (341), Expect = 2e-29
Identities = 67/89 (75%), Positives = 73/89 (82%)
Frame = +2
Query: 191 STNLFVSGLNKRTTTEGLRAAFAKFGDVVDAKVVTDRVSGYSKGFGFVRYATIEEAGKGI 370
STNLFVSGLNKRTT+EGL AFA FG+VV A+VVTDRVSG+SKGFGFVRYAT+E+A KG
Sbjct: 45 STNLFVSGLNKRTTSEGLHKAFAAFGEVVQARVVTDRVSGFSKGFGFVRYATLEDAAKGK 104
Query: 371 TGMDGQFLDGWVIFAEYAXXXXXXXXXEN 457
GMDGQFLDGWVIFAEYA EN
Sbjct: 105 QGMDGQFLDGWVIFAEYARPRTPTPPPEN 133
>gb|EMJ13415.1| hypothetical protein PRUPE_ppa013115mg [Prunus persica]
Length = 139
Score = 135 bits (341), Expect = 2e-29
Identities = 75/118 (63%), Positives = 85/118 (72%)
Frame = +2
Query: 104 GLRALLFSTSGFPFNXXXXXXXXXXXXXXSTNLFVSGLNKRTTTEGLRAAFAKFGDVVDA 283
GLR L FSTS P STNLFVSGL+KRTT+E L+ AF++FG+VV A
Sbjct: 15 GLRRL-FSTSFIP-PMNSPAPQAREKAEPSTNLFVSGLSKRTTSEKLQEAFSQFGEVVHA 72
Query: 284 KVVTDRVSGYSKGFGFVRYATIEEAGKGITGMDGQFLDGWVIFAEYAXXXXXXXXXEN 457
+VVTDRVSGYSKGFGFVRYAT+E+AGKGI GMDG+FLDGWVIFAEYA EN
Sbjct: 73 RVVTDRVSGYSKGFGFVRYATLEDAGKGIDGMDGKFLDGWVIFAEYARPRQPPPPPEN 130
>gb|EAZ04269.1| hypothetical protein OsI_26412 [Oryza sativa Indica Group]
Length = 133
Score = 135 bits (341), Expect = 2e-29
Identities = 62/92 (67%), Positives = 77/92 (83%)
Frame = +2
Query: 197 NLFVSGLNKRTTTEGLRAAFAKFGDVVDAKVVTDRVSGYSKGFGFVRYATIEEAGKGITG 376
NLFVSGLNKRTT++GLR AF+KFG V++A+V+TDR+SGYS+GFGFV+YAT+EEAG+GI G
Sbjct: 36 NLFVSGLNKRTTSDGLREAFSKFGQVIEARVITDRISGYSRGFGFVKYATVEEAGEGIKG 95
Query: 377 MDGQFLDGWVIFAEYAXXXXXXXXXENAVQSG 472
MDG+FLDGWVIFAEYA + A +G
Sbjct: 96 MDGKFLDGWVIFAEYAKQREAQQPAQPAASTG 127
>ref|XP_003562947.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
[Brachypodium distachyon]
Length = 138
Score = 135 bits (340), Expect = 2e-29
Identities = 61/76 (80%), Positives = 72/76 (94%)
Frame = +2
Query: 197 NLFVSGLNKRTTTEGLRAAFAKFGDVVDAKVVTDRVSGYSKGFGFVRYATIEEAGKGITG 376
NLFVSGLNKRTTT+GLR AF+KFG V +A+V+TDR+SGYS+GFGFV+YAT+EEAG+GI G
Sbjct: 41 NLFVSGLNKRTTTDGLREAFSKFGQVTEARVITDRISGYSRGFGFVKYATVEEAGEGIKG 100
Query: 377 MDGQFLDGWVIFAEYA 424
MDG+FLDGWVIFAEYA
Sbjct: 101 MDGKFLDGWVIFAEYA 116
>ref|NP_001059935.1| Os07g0549800 [Oryza sativa Japonica Group]
gi|28564803|dbj|BAC57733.1| RNA recognition motif
(RRM)-containing protein-like [Oryza sativa Japonica
Group] gi|113611471|dbj|BAF21849.1| Os07g0549800 [Oryza
sativa Japonica Group] gi|125600644|gb|EAZ40220.1|
hypothetical protein OsJ_24665 [Oryza sativa Japonica
Group] gi|215767980|dbj|BAH00209.1| unnamed protein
product [Oryza sativa Japonica Group]
Length = 133
Score = 135 bits (339), Expect = 3e-29
Identities = 60/76 (78%), Positives = 73/76 (96%)
Frame = +2
Query: 197 NLFVSGLNKRTTTEGLRAAFAKFGDVVDAKVVTDRVSGYSKGFGFVRYATIEEAGKGITG 376
NLFVSGLNKRTT++GLR AF+KFG V++A+V+TDR+SGYS+GFGFV+YAT+EEAG+GI G
Sbjct: 36 NLFVSGLNKRTTSDGLREAFSKFGQVIEARVITDRISGYSRGFGFVKYATVEEAGEGIKG 95
Query: 377 MDGQFLDGWVIFAEYA 424
MDG+FLDGWVIFAEYA
Sbjct: 96 MDGKFLDGWVIFAEYA 111
>ref|XP_004972888.1| PREDICTED: nucleolin-like [Setaria italica]
Length = 140
Score = 134 bits (338), Expect = 3e-29
Identities = 65/78 (83%), Positives = 72/78 (92%)
Frame = +2
Query: 191 STNLFVSGLNKRTTTEGLRAAFAKFGDVVDAKVVTDRVSGYSKGFGFVRYATIEEAGKGI 370
S NLFVSGL+KRTTTEGLR AFA FG+VV A+VVTDRVSG+SKGFGFVRYAT+E+A KGI
Sbjct: 34 SPNLFVSGLSKRTTTEGLREAFAAFGEVVHARVVTDRVSGFSKGFGFVRYATVEDATKGI 93
Query: 371 TGMDGQFLDGWVIFAEYA 424
GMDG+FLDGWVIFAEYA
Sbjct: 94 EGMDGKFLDGWVIFAEYA 111
>ref|XP_006659102.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
[Oryza brachyantha]
Length = 141
Score = 134 bits (337), Expect = 4e-29
Identities = 63/78 (80%), Positives = 73/78 (93%)
Frame = +2
Query: 191 STNLFVSGLNKRTTTEGLRAAFAKFGDVVDAKVVTDRVSGYSKGFGFVRYATIEEAGKGI 370
S NLFVSGL+KRTTT+GLR AFAKFG+V+ A+VVTDRV+G+SKGFGFVRYAT+E+A KGI
Sbjct: 35 SPNLFVSGLSKRTTTDGLREAFAKFGEVLHARVVTDRVTGFSKGFGFVRYATVEDAAKGI 94
Query: 371 TGMDGQFLDGWVIFAEYA 424
GMDG+FLDGWVIFAEYA
Sbjct: 95 EGMDGKFLDGWVIFAEYA 112
>ref|XP_002530915.1| RNA binding protein, putative [Ricinus communis]
gi|223529509|gb|EEF31464.1| RNA binding protein,
putative [Ricinus communis]
Length = 354
Score = 134 bits (337), Expect = 4e-29
Identities = 63/78 (80%), Positives = 73/78 (93%)
Frame = +2
Query: 191 STNLFVSGLNKRTTTEGLRAAFAKFGDVVDAKVVTDRVSGYSKGFGFVRYATIEEAGKGI 370
+TNLFVSGL+KRTTTEGL+ AF+KFG+VV A+VVTDRVSGYSKGFGFVRY ++E+A KGI
Sbjct: 51 NTNLFVSGLSKRTTTEGLKQAFSKFGEVVQARVVTDRVSGYSKGFGFVRYGSLEDAEKGI 110
Query: 371 TGMDGQFLDGWVIFAEYA 424
GMDG+FLDGWVIFAEYA
Sbjct: 111 EGMDGKFLDGWVIFAEYA 128