BLASTX nr result
ID: Rauwolfia21_contig00005002
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00005002
(759 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008081309.1| hypothetical chloroplast RF2 (chloroplast) [... 62 3e-07
gb|ADD30887.1| putative RF2 protein [Nerium oleander] gi|3408071... 62 3e-07
ref|YP_009002306.1| Ycf2 (chloroplast) [Pinguicula ehlersiae] gi... 59 1e-06
ref|YP_009002298.1| Ycf2 (chloroplast) [Pinguicula ehlersiae] gi... 59 1e-06
gb|AFK81537.1| hypothetical chloroplast RF21 [Camellia taliensis] 59 1e-06
gb|AFK81516.1| hypothetical chloroplast RF21 [Camellia taliensis] 59 1e-06
gb|AGW04940.1| hypothetical chloroplast protein [Telosma cordata] 59 1e-06
gb|AGW04863.1| hypothetical chloroplast protein [Sisyranthus tri... 59 1e-06
gb|AGW04559.1| hypothetical chloroplast protein [Eustegia minuta] 59 1e-06
gb|AGW04329.1| hypothetical chloroplast protein [Secamone afzelii] 59 1e-06
ref|YP_008520183.1| Ycf2 (chloroplast) [Camellia taliensis] gi|5... 59 1e-06
ref|YP_008592977.1| Ycf2 (chloroplast) [Camellia impressinervis]... 59 1e-06
ref|YP_008592887.1| Ycf2 (chloroplast) [Camellia danzaiensis] gi... 59 1e-06
ref|YP_008592801.1| Ycf2 (chloroplast) [Camellia cuspidata] gi|5... 59 1e-06
ref|YP_008592532.1| Ycf2 (chloroplast) [Andrographis paniculata]... 59 1e-06
ref|YP_007353958.1| Ycf2 protein (chloroplast) [Tectona grandis]... 59 1e-06
ref|YP_007317292.1| Ycf2 (chloroplast) [Camellia sinensis] gi|43... 59 1e-06
gb|AAB50535.1| ORF2280 gene homolog [Limonium gmelinii] 59 1e-06
ref|YP_004564046.1| Ycf2 protein [Olea woodiana subsp. woodiana]... 59 1e-06
emb|CBR23873.1| Ycf2 protein [Olea europaea subsp. cuspidata] gi... 59 1e-06
>ref|YP_008081309.1| hypothetical chloroplast RF2 (chloroplast) [Catharanthus roseus]
gi|511348399|ref|YP_008081328.1| hypothetical
chloroplast RF2 (chloroplast) [Catharanthus roseus]
gi|474452120|gb|AGI51188.1| hypothetical chloroplast RF2
(chloroplast) [Catharanthus roseus]
gi|474452139|gb|AGI51207.1| hypothetical chloroplast RF2
(chloroplast) [Catharanthus roseus]
Length = 2273
Score = 61.6 bits (148), Expect = 3e-07
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = -1
Query: 465 KKDHDWELFDRLSLRKRRNTINLNSGPL 382
+KDHDWELFDRLSLRKRRNTINLNSGPL
Sbjct: 228 RKDHDWELFDRLSLRKRRNTINLNSGPL 255
>gb|ADD30887.1| putative RF2 protein [Nerium oleander] gi|340807172|gb|AEK71765.1|
hypothetical chloroplast RF2 [Nerium oleander]
Length = 2278
Score = 61.6 bits (148), Expect = 3e-07
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = -1
Query: 465 KKDHDWELFDRLSLRKRRNTINLNSGPL 382
+KDHDWELFDRLSLRKRRNTINLNSGPL
Sbjct: 228 RKDHDWELFDRLSLRKRRNTINLNSGPL 255
>ref|YP_009002306.1| Ycf2 (chloroplast) [Pinguicula ehlersiae]
gi|575882189|emb|CDL78862.1| Ycf2 (chloroplast)
[Pinguicula ehlersiae]
Length = 2280
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = -1
Query: 465 KKDHDWELFDRLSLRKRRNTINLNSGPL 382
+KDHDWELFDRLSLRKRRN INLNSGPL
Sbjct: 228 RKDHDWELFDRLSLRKRRNRINLNSGPL 255
>ref|YP_009002298.1| Ycf2 (chloroplast) [Pinguicula ehlersiae]
gi|575882181|emb|CDL78854.1| Ycf2 (chloroplast)
[Pinguicula ehlersiae]
Length = 2280
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = -1
Query: 465 KKDHDWELFDRLSLRKRRNTINLNSGPL 382
+KDHDWELFDRLSLRKRRN INLNSGPL
Sbjct: 228 RKDHDWELFDRLSLRKRRNRINLNSGPL 255
>gb|AFK81537.1| hypothetical chloroplast RF21 [Camellia taliensis]
Length = 2298
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = -1
Query: 465 KKDHDWELFDRLSLRKRRNTINLNSGPL 382
+KDHDWELFDRLSLRKRRN INLNSGPL
Sbjct: 228 RKDHDWELFDRLSLRKRRNIINLNSGPL 255
>gb|AFK81516.1| hypothetical chloroplast RF21 [Camellia taliensis]
Length = 2298
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = -1
Query: 465 KKDHDWELFDRLSLRKRRNTINLNSGPL 382
+KDHDWELFDRLSLRKRRN INLNSGPL
Sbjct: 228 RKDHDWELFDRLSLRKRRNIINLNSGPL 255
>gb|AGW04940.1| hypothetical chloroplast protein [Telosma cordata]
Length = 2308
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = -1
Query: 465 KKDHDWELFDRLSLRKRRNTINLNSGPL 382
+KDHDWELFDRLSLRKRRN INLNSGPL
Sbjct: 228 RKDHDWELFDRLSLRKRRNPINLNSGPL 255
>gb|AGW04863.1| hypothetical chloroplast protein [Sisyranthus trichostomus]
Length = 2294
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = -1
Query: 465 KKDHDWELFDRLSLRKRRNTINLNSGPL 382
+KDHDWELFDRLSLRKRRN INLNSGPL
Sbjct: 229 RKDHDWELFDRLSLRKRRNPINLNSGPL 256
>gb|AGW04559.1| hypothetical chloroplast protein [Eustegia minuta]
Length = 2320
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = -1
Query: 465 KKDHDWELFDRLSLRKRRNTINLNSGPL 382
+KDHDWELFDRLSLRKRRN INLNSGPL
Sbjct: 248 RKDHDWELFDRLSLRKRRNPINLNSGPL 275
>gb|AGW04329.1| hypothetical chloroplast protein [Secamone afzelii]
Length = 2279
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = -1
Query: 465 KKDHDWELFDRLSLRKRRNTINLNSGPL 382
+KDHDWELFDRLSLRKRRN INLNSGPL
Sbjct: 228 RKDHDWELFDRLSLRKRRNPINLNSGPL 255
>ref|YP_008520183.1| Ycf2 (chloroplast) [Camellia taliensis]
gi|542688111|ref|YP_008520204.1| Ycf2 (chloroplast)
[Camellia taliensis] gi|537362670|gb|AGU44475.1| Ycf2
(chloroplast) [Camellia taliensis]
gi|537362671|gb|AGU44476.1| Ycf2 (chloroplast) [Camellia
taliensis] gi|537362940|gb|AGU44742.1| Ycf2
(chloroplast) [Camellia taliensis]
gi|537362941|gb|AGU44743.1| Ycf2 (chloroplast) [Camellia
taliensis]
Length = 2282
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = -1
Query: 465 KKDHDWELFDRLSLRKRRNTINLNSGPL 382
+KDHDWELFDRLSLRKRRN INLNSGPL
Sbjct: 228 RKDHDWELFDRLSLRKRRNIINLNSGPL 255
>ref|YP_008592977.1| Ycf2 (chloroplast) [Camellia impressinervis]
gi|552540927|ref|YP_008592998.1| Ycf2 (chloroplast)
[Camellia impressinervis]
gi|552541020|ref|YP_008593155.1| Ycf2 (chloroplast)
[Camellia yunnanensis] gi|552541021|ref|YP_008593176.1|
Ycf2 (chloroplast) [Camellia yunnanensis]
gi|537362580|gb|AGU44386.1| Ycf2 (chloroplast) [Camellia
impressinervis] gi|537362581|gb|AGU44387.1| Ycf2
(chloroplast) [Camellia impressinervis]
gi|537362850|gb|AGU44653.1| Ycf2 (chloroplast) [Camellia
yunnanensis] gi|537362851|gb|AGU44654.1| Ycf2
(chloroplast) [Camellia yunnanensis]
Length = 2292
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = -1
Query: 465 KKDHDWELFDRLSLRKRRNTINLNSGPL 382
+KDHDWELFDRLSLRKRRN INLNSGPL
Sbjct: 228 RKDHDWELFDRLSLRKRRNIINLNSGPL 255
>ref|YP_008592887.1| Ycf2 (chloroplast) [Camellia danzaiensis]
gi|552540834|ref|YP_008592909.1| Ycf2 (chloroplast)
[Camellia danzaiensis] gi|552546179|ref|YP_008593066.1|
Ycf2 (chloroplast) [Camellia pitardii]
gi|552546180|ref|YP_008593087.1| Ycf2 (chloroplast)
[Camellia pitardii] gi|537362492|gb|AGU44299.1| Ycf2
(chloroplast) [Camellia danzaiensis]
gi|537362493|gb|AGU44300.1| Ycf2 (chloroplast) [Camellia
danzaiensis] gi|537362760|gb|AGU44564.1| Ycf2
(chloroplast) [Camellia pitardii]
gi|537362761|gb|AGU44565.1| Ycf2 (chloroplast) [Camellia
pitardii]
Length = 2292
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = -1
Query: 465 KKDHDWELFDRLSLRKRRNTINLNSGPL 382
+KDHDWELFDRLSLRKRRN INLNSGPL
Sbjct: 228 RKDHDWELFDRLSLRKRRNIINLNSGPL 255
>ref|YP_008592801.1| Ycf2 (chloroplast) [Camellia cuspidata]
gi|552539585|ref|YP_008592822.1| Ycf2 (chloroplast)
[Camellia cuspidata] gi|537362402|gb|AGU44210.1| Ycf2
(chloroplast) [Camellia cuspidata]
gi|537362403|gb|AGU44211.1| Ycf2 (chloroplast) [Camellia
cuspidata]
Length = 2292
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = -1
Query: 465 KKDHDWELFDRLSLRKRRNTINLNSGPL 382
+KDHDWELFDRLSLRKRRN INLNSGPL
Sbjct: 228 RKDHDWELFDRLSLRKRRNRINLNSGPL 255
>ref|YP_008592532.1| Ycf2 (chloroplast) [Andrographis paniculata]
gi|552541366|ref|YP_008592551.1| Ycf2 (chloroplast)
[Andrographis paniculata] gi|532164880|gb|AGT79890.1|
Ycf2 (chloroplast) [Andrographis paniculata]
gi|532164899|gb|AGT79909.1| Ycf2 (chloroplast)
[Andrographis paniculata]
Length = 2256
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = -1
Query: 465 KKDHDWELFDRLSLRKRRNTINLNSGPL 382
+KDHDWELFDRLSLRKRRN INLNSGPL
Sbjct: 224 RKDHDWELFDRLSLRKRRNRINLNSGPL 251
>ref|YP_007353958.1| Ycf2 protein (chloroplast) [Tectona grandis]
gi|442743025|ref|YP_007353977.1| Ycf2 protein
(chloroplast) [Tectona grandis]
gi|438687647|emb|CCP47174.1| YCF2 protein (chloroplast)
[Tectona grandis] gi|438687666|emb|CCP47196.1| ycf2
protein (chloroplast) [Tectona grandis]
gi|438688331|emb|CCP47263.1| YCF2 protein (chloroplast)
[Tectona grandis] gi|438688350|emb|CCP47285.1| ycf2
protein (chloroplast) [Tectona grandis]
gi|438688455|emb|CCP47352.1| YCF2 protein (chloroplast)
[Tectona grandis] gi|438688474|emb|CCP47374.1| ycf2
protein (chloroplast) [Tectona grandis]
Length = 2287
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = -1
Query: 465 KKDHDWELFDRLSLRKRRNTINLNSGPL 382
+KDHDWELFDRLSLRKRRN INLNSGPL
Sbjct: 228 RKDHDWELFDRLSLRKRRNRINLNSGPL 255
>ref|YP_007317292.1| Ycf2 (chloroplast) [Camellia sinensis]
gi|435856436|ref|YP_007317311.1| Ycf2 (chloroplast)
[Camellia sinensis] gi|568244602|ref|YP_008963349.1|
hypothetical chloroplast RF21 [Camellia oleifera]
gi|568244623|ref|YP_008963370.1| hypothetical
chloroplast RF21 [Camellia oleifera]
gi|388893250|gb|AFK81342.1| hypothetical chloroplast
RF21 [Camellia sinensis var. assamica]
gi|388893271|gb|AFK81363.1| hypothetical chloroplast
RF21 [Camellia sinensis var. assamica]
gi|388893338|gb|AFK81429.1| hypothetical chloroplast
RF21 [Camellia oleifera] gi|388893359|gb|AFK81450.1|
hypothetical chloroplast RF21 [Camellia oleifera]
gi|430728316|gb|AGA55640.1| Ycf2 (chloroplast) [Camellia
sinensis] gi|430728335|gb|AGA55659.1| Ycf2 (chloroplast)
[Camellia sinensis] gi|555945959|gb|AGZ19186.1|
hypothetical chloroplast RF21 (chloroplast) [Camellia
sinensis]
Length = 2298
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = -1
Query: 465 KKDHDWELFDRLSLRKRRNTINLNSGPL 382
+KDHDWELFDRLSLRKRRN INLNSGPL
Sbjct: 228 RKDHDWELFDRLSLRKRRNIINLNSGPL 255
>gb|AAB50535.1| ORF2280 gene homolog [Limonium gmelinii]
Length = 181
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = -1
Query: 465 KKDHDWELFDRLSLRKRRNTINLNSGPL 382
+KDHDWELFDRLSLRKRRN INLNSGPL
Sbjct: 38 RKDHDWELFDRLSLRKRRNRINLNSGPL 65
>ref|YP_004564046.1| Ycf2 protein [Olea woodiana subsp. woodiana]
gi|334701681|ref|YP_004564066.1| Ycf2 protein [Olea
woodiana subsp. woodiana] gi|334084701|emb|CBS29394.1|
Ycf2 protein [Olea woodiana subsp. woodiana]
gi|334084721|emb|CBS29415.1| Ycf2 protein [Olea woodiana
subsp. woodiana]
Length = 2165
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = -1
Query: 465 KKDHDWELFDRLSLRKRRNTINLNSGPL 382
+KDHDWELFDRLSLRKRRN INLNSGPL
Sbjct: 116 RKDHDWELFDRLSLRKRRNRINLNSGPL 143
>emb|CBR23873.1| Ycf2 protein [Olea europaea subsp. cuspidata]
gi|334084463|emb|CBR23893.1| Ycf2 protein [Olea europaea
subsp. cuspidata]
Length = 2165
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = -1
Query: 465 KKDHDWELFDRLSLRKRRNTINLNSGPL 382
+KDHDWELFDRLSLRKRRN INLNSGPL
Sbjct: 116 RKDHDWELFDRLSLRKRRNRINLNSGPL 143