BLASTX nr result
ID: Rauwolfia21_contig00003270
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00003270
(562 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 135 7e-30
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 135 7e-30
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 135 7e-30
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 134 2e-29
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g... 134 2e-29
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 134 2e-29
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 132 6e-29
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc... 131 1e-28
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g... 130 2e-28
emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group] 130 3e-28
gb|EOY22705.1| Transducin/WD40 repeat-like superfamily protein [... 126 3e-27
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 126 4e-27
gb|EOY09126.1| Uncharacterized protein TCM_024518 [Theobroma cacao] 121 1e-25
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 120 3e-25
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ... 119 4e-25
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 117 1e-24
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 117 2e-24
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 117 3e-24
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 117 3e-24
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote... 116 3e-24
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 135 bits (340), Expect = 7e-30
Identities = 73/166 (43%), Positives = 101/166 (60%)
Frame = -1
Query: 499 NVKHDIEKLGRDTRFLLWQTRMKAILTQMDLEDALLGVDKMPASMSAEEKERKNRKAISQ 320
++K+D+ L RDTRF LWQ +M+A+L Q DL+DAL G DK S +EK +K+RKA+S
Sbjct: 38 SLKYDLPLLDRDTRFSLWQVKMRAVLAQQDLDDALSGFDKRTQDWSNDEK-KKDRKAMSY 96
Query: 319 IQLHLSNEILQDFITEGSAASLWQKLEAXXXXXXXXXXXXXXXXLYSFRLAEGKSLQSHV 140
I LHLSN ILQ+ + E +AA LW KLE L+ +L + S+ H+
Sbjct: 97 IHLHLSNNILQEVLKEETAAGLWLKLEQICMTKDLTSKMHLKQKLFLHKLQDDGSVMDHL 156
Query: 139 DEFKSIVADLEKLDVKYEDEDXXXXXXXXLTAPFKHFRDTMLYGRD 2
FK IVADLE ++VKY++ED L + + +FRDT+LY D
Sbjct: 157 STFKEIVADLESIEVKYDEEDLGLILLCSLPSSYANFRDTILYSHD 202
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 135 bits (340), Expect = 7e-30
Identities = 73/166 (43%), Positives = 101/166 (60%)
Frame = -1
Query: 499 NVKHDIEKLGRDTRFLLWQTRMKAILTQMDLEDALLGVDKMPASMSAEEKERKNRKAISQ 320
++K+D+ L RDTRF LWQ +M+A+L Q DL+DAL G DK S +EK +K+RKA+S
Sbjct: 38 SLKYDLPLLDRDTRFSLWQVKMRAVLAQQDLDDALSGFDKRTQDWSNDEK-KKDRKAMSY 96
Query: 319 IQLHLSNEILQDFITEGSAASLWQKLEAXXXXXXXXXXXXXXXXLYSFRLAEGKSLQSHV 140
I LHLSN ILQ+ + E +AA LW KLE L+ +L + S+ H+
Sbjct: 97 IHLHLSNNILQEVLKEETAAGLWLKLEQICMTKDLTSKMHLKQKLFLHKLQDDGSVMDHL 156
Query: 139 DEFKSIVADLEKLDVKYEDEDXXXXXXXXLTAPFKHFRDTMLYGRD 2
FK IVADLE ++VKY++ED L + + +FRDT+LY D
Sbjct: 157 STFKEIVADLESIEVKYDEEDLGLILLCSLPSSYANFRDTILYSHD 202
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 135 bits (340), Expect = 7e-30
Identities = 73/166 (43%), Positives = 102/166 (61%)
Frame = -1
Query: 499 NVKHDIEKLGRDTRFLLWQTRMKAILTQMDLEDALLGVDKMPASMSAEEKERKNRKAISQ 320
++K+D+ L RDTRF LWQ +M+A+L Q DL+DAL G DK S +EK+R +RKAIS
Sbjct: 3 SLKYDLPLLDRDTRFSLWQVKMRAVLAQQDLDDALSGFDKRTQDWSNDEKKR-DRKAISY 61
Query: 319 IQLHLSNEILQDFITEGSAASLWQKLEAXXXXXXXXXXXXXXXXLYSFRLAEGKSLQSHV 140
I LHLSN ILQ+ + E +AA LW KLE L+ +L + +S+ H+
Sbjct: 62 IHLHLSNNILQEVLKEETAAGLWLKLEQICMTKDLTSKMHLKQKLFLHKLQDDESVMDHL 121
Query: 139 DEFKSIVADLEKLDVKYEDEDXXXXXXXXLTAPFKHFRDTMLYGRD 2
FK IVADLE ++VKY+++D L + + +FR T+LY RD
Sbjct: 122 SAFKEIVADLESMEVKYDEDDLGLILLCSLPSSYANFRGTILYSRD 167
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 134 bits (337), Expect = 2e-29
Identities = 73/166 (43%), Positives = 101/166 (60%)
Frame = -1
Query: 499 NVKHDIEKLGRDTRFLLWQTRMKAILTQMDLEDALLGVDKMPASMSAEEKERKNRKAISQ 320
++K+D+ L RDTRF LWQ +M+A+L Q DL+DAL G DK S +EK+R +RKA+S
Sbjct: 210 SLKYDLPLLYRDTRFSLWQVKMRAVLAQQDLDDALSGFDKRTHDWSNDEKKR-DRKAMSY 268
Query: 319 IQLHLSNEILQDFITEGSAASLWQKLEAXXXXXXXXXXXXXXXXLYSFRLAEGKSLQSHV 140
I LHLSN ILQ+ + E AA LW KLE L+ +L + S+ H+
Sbjct: 269 IHLHLSNNILQEVLKEEIAAGLWLKLEQICMTKDLTSKMHLKQTLFLHKLQDDGSVMDHL 328
Query: 139 DEFKSIVADLEKLDVKYEDEDXXXXXXXXLTAPFKHFRDTMLYGRD 2
FK I+ADLE ++VKY++ED L + + +FRDT+LY RD
Sbjct: 329 SAFKEIIADLESMEVKYDEEDLGLILLCSLPSSYANFRDTILYSRD 374
>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
Japonica Group]
Length = 1601
Score = 134 bits (337), Expect = 2e-29
Identities = 73/166 (43%), Positives = 101/166 (60%)
Frame = -1
Query: 499 NVKHDIEKLGRDTRFLLWQTRMKAILTQMDLEDALLGVDKMPASMSAEEKERKNRKAISQ 320
++K+D+ L RDTRF LWQ +M+A+L Q DL+DAL G DK S +EK+R +RKA+S
Sbjct: 3 SLKYDLPLLYRDTRFSLWQVKMRAVLAQQDLDDALSGFDKRTHDWSNDEKKR-DRKAMSY 61
Query: 319 IQLHLSNEILQDFITEGSAASLWQKLEAXXXXXXXXXXXXXXXXLYSFRLAEGKSLQSHV 140
I LHLSN ILQ+ + E AA LW KLE L+ +L + S+ H+
Sbjct: 62 IHLHLSNNILQEVLKEEIAAGLWLKLEQICMTKDLTSKMHLKQTLFLHKLQDDGSVMDHL 121
Query: 139 DEFKSIVADLEKLDVKYEDEDXXXXXXXXLTAPFKHFRDTMLYGRD 2
FK I+ADLE ++VKY++ED L + + +FRDT+LY RD
Sbjct: 122 SAFKEIIADLESMEVKYDEEDLGLILLCSLPSSYANFRDTILYSRD 167
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 134 bits (336), Expect = 2e-29
Identities = 72/166 (43%), Positives = 102/166 (61%)
Frame = -1
Query: 499 NVKHDIEKLGRDTRFLLWQTRMKAILTQMDLEDALLGVDKMPASMSAEEKERKNRKAISQ 320
++K+D+ L RDTRF LWQ +M+A+L Q +L+DAL G DK S +EK+R +RKA+S
Sbjct: 3 SLKYDLPLLDRDTRFSLWQVKMRAVLAQQELDDALSGFDKRTQDWSNDEKKR-DRKAMSY 61
Query: 319 IQLHLSNEILQDFITEGSAASLWQKLEAXXXXXXXXXXXXXXXXLYSFRLAEGKSLQSHV 140
I LHLSN ILQ+ + E +AA LW KLE L+ +L + S+ H+
Sbjct: 62 IHLHLSNNILQEVLKEETAAGLWLKLEQICMTKDLTSKMHLKQKLFLHKLQDDGSVMDHL 121
Query: 139 DEFKSIVADLEKLDVKYEDEDXXXXXXXXLTAPFKHFRDTMLYGRD 2
FK IVADLE ++VKY+++D L + + +FRDT+LY RD
Sbjct: 122 SAFKEIVADLESMEVKYDEKDLALILLCSLPSSYANFRDTILYSRD 167
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 132 bits (332), Expect = 6e-29
Identities = 72/166 (43%), Positives = 100/166 (60%)
Frame = -1
Query: 499 NVKHDIEKLGRDTRFLLWQTRMKAILTQMDLEDALLGVDKMPASMSAEEKERKNRKAISQ 320
++K+D+ L RDTRF LWQ +M+A+L Q DL+DAL G DK S +EK+R +RK +S
Sbjct: 3 SLKYDLPLLDRDTRFSLWQVKMRAVLAQQDLDDALSGFDKRTQDWSNDEKKR-DRKTMSY 61
Query: 319 IQLHLSNEILQDFITEGSAASLWQKLEAXXXXXXXXXXXXXXXXLYSFRLAEGKSLQSHV 140
I LHLSN ILQ+ + E +AA LW KLE L+ +L + S+ H+
Sbjct: 62 IHLHLSNNILQEVLKEETAAGLWLKLEQICMTKDLTSKMHLKQKLFLHKLQDDGSVMDHL 121
Query: 139 DEFKSIVADLEKLDVKYEDEDXXXXXXXXLTAPFKHFRDTMLYGRD 2
FK IVADLE ++VKY++ED L + + +FRDT+LY D
Sbjct: 122 SAFKKIVADLESMEVKYDEEDLCLILLCSLPSSYANFRDTILYSCD 167
>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 983
Score = 131 bits (330), Expect = 1e-28
Identities = 71/166 (42%), Positives = 100/166 (60%)
Frame = -1
Query: 499 NVKHDIEKLGRDTRFLLWQTRMKAILTQMDLEDALLGVDKMPASMSAEEKERKNRKAISQ 320
++K+D+ L RDTRF LWQ +M+A+L Q DL+DAL DK S +EK+R +RKA+S
Sbjct: 3 SLKYDLPLLDRDTRFSLWQVKMRAVLAQQDLDDALSRFDKRTQDWSNDEKKR-DRKAMSY 61
Query: 319 IQLHLSNEILQDFITEGSAASLWQKLEAXXXXXXXXXXXXXXXXLYSFRLAEGKSLQSHV 140
I LHLSN IL + + E +AA LW KLE L+ +L + +S+ H+
Sbjct: 62 IHLHLSNNILHEVLKEETAAGLWLKLEQICMTKDLTSKMHLKQKLFLHKLQDDESVMDHL 121
Query: 139 DEFKSIVADLEKLDVKYEDEDXXXXXXXXLTAPFKHFRDTMLYGRD 2
FK IV DLE ++VKY++ED L + + +FRDT+LY RD
Sbjct: 122 SAFKEIVTDLESMEVKYDEEDLGLILLCSLPSSYANFRDTILYSRD 167
>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
Japonica Group]
Length = 778
Score = 130 bits (328), Expect = 2e-28
Identities = 69/166 (41%), Positives = 100/166 (60%)
Frame = -1
Query: 499 NVKHDIEKLGRDTRFLLWQTRMKAILTQMDLEDALLGVDKMPASMSAEEKERKNRKAISQ 320
++K+D+ L RDTRF LWQ +M+A+L Q DL+DAL G DK S +EK +K+ K +S
Sbjct: 3 SLKYDLPLLDRDTRFSLWQVKMRAVLAQQDLDDALSGFDKRTQDWSVDEK-KKDHKVMSY 61
Query: 319 IQLHLSNEILQDFITEGSAASLWQKLEAXXXXXXXXXXXXXXXXLYSFRLAEGKSLQSHV 140
I LHLSN ILQ+ + E +A LW KL+ L+ +L + +S+ H+
Sbjct: 62 IHLHLSNNILQEVLKEETAVGLWLKLKQICMTKDLTSKMHLKQKLFLHKLQDDESVMDHL 121
Query: 139 DEFKSIVADLEKLDVKYEDEDXXXXXXXXLTAPFKHFRDTMLYGRD 2
FK IVADLE ++VK+++ED L + + +FRDT+LY RD
Sbjct: 122 SAFKEIVADLESMEVKHDEEDLGLILLCSLPSSYANFRDTILYSRD 167
>emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]
Length = 1007
Score = 130 bits (326), Expect = 3e-28
Identities = 71/166 (42%), Positives = 101/166 (60%)
Frame = -1
Query: 499 NVKHDIEKLGRDTRFLLWQTRMKAILTQMDLEDALLGVDKMPASMSAEEKERKNRKAISQ 320
++K+D+ L RDTRF LWQ +M+A+L Q DL+DAL G DK S +EK+R + KA+S
Sbjct: 3 SLKYDLPLLDRDTRFSLWQVKMRAVLAQQDLDDALSGFDKRTQDWSKDEKKR-DCKAMSY 61
Query: 319 IQLHLSNEILQDFITEGSAASLWQKLEAXXXXXXXXXXXXXXXXLYSFRLAEGKSLQSHV 140
I +HLSN ILQ+ + E +AA LW KLE L+ +L + S+ H+
Sbjct: 62 IHVHLSNNILQEVLKEETAAGLWLKLEQICMTKDLTSKMHLKQKLFLHKLQDDGSVMDHL 121
Query: 139 DEFKSIVADLEKLDVKYEDEDXXXXXXXXLTAPFKHFRDTMLYGRD 2
FK IVADLE ++VKY++E+ L + + +FRDT+LY RD
Sbjct: 122 FAFKEIVADLESMEVKYDEENLGLILLCSLPSSYANFRDTILYSRD 167
>gb|EOY22705.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
Length = 1029
Score = 126 bits (317), Expect = 3e-27
Identities = 72/187 (38%), Positives = 108/187 (57%), Gaps = 5/187 (2%)
Frame = -1
Query: 547 QQIGIRAKAPY-----EMAAVNVKHDIEKLGRDTRFLLWQTRMKAILTQMDLEDALLGVD 383
QQ GIRA + MA + K++IEK F LW+ +M+A+L Q L AL G +
Sbjct: 106 QQTGIRASRSWVNLNLAMATSSTKYEIEKFNGRNDFSLWRVKMRALLVQQGLLKALKGKE 165
Query: 382 KMPASMSAEEKERKNRKAISQIQLHLSNEILQDFITEGSAASLWQKLEAXXXXXXXXXXX 203
+P+++S EK+ +KA S I L LS+E+L++ E SAA++W KLE+
Sbjct: 166 HLPSNLSDGEKDDLMKKAHSVILLALSDEVLREVTDEESAAAVWFKLESIYMTKSLTNRL 225
Query: 202 XXXXXLYSFRLAEGKSLQSHVDEFKSIVADLEKLDVKYEDEDXXXXXXXXLTAPFKHFRD 23
LY+ +++EG S+ +H+DEF ++ DL+ +DVK EDED L +++F D
Sbjct: 226 YMKQRLYTLKMSEGTSVNTHIDEFNRVILDLKNIDVKIEDEDLALILLCYLPPSYENFVD 285
Query: 22 TMLYGRD 2
TMLYGRD
Sbjct: 286 TMLYGRD 292
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 126 bits (316), Expect = 4e-27
Identities = 71/166 (42%), Positives = 96/166 (57%)
Frame = -1
Query: 499 NVKHDIEKLGRDTRFLLWQTRMKAILTQMDLEDALLGVDKMPASMSAEEKERKNRKAISQ 320
++K+D+ L RDTRF LWQ +M+A+L Q DL+DA G DK S +EK + +RKA+S
Sbjct: 3 SLKYDLPLLDRDTRFSLWQVKMRAVLAQQDLDDAFSGFDKRTQDWSNDEK-KMDRKAMSY 61
Query: 319 IQLHLSNEILQDFITEGSAASLWQKLEAXXXXXXXXXXXXXXXXLYSFRLAEGKSLQSHV 140
I LHLSN ILQ+ + E +AA LW KLE L S+ H+
Sbjct: 62 IHLHLSNNILQEVLKEETAAGLWLKLEQICMTKD---------------LTNDGSVMDHL 106
Query: 139 DEFKSIVADLEKLDVKYEDEDXXXXXXXXLTAPFKHFRDTMLYGRD 2
FK IVADLE ++VKY++ED L + + +FRDT+LY RD
Sbjct: 107 SVFKEIVADLESMEVKYDEEDLGLILLCSLPSSYANFRDTILYSRD 152
>gb|EOY09126.1| Uncharacterized protein TCM_024518 [Theobroma cacao]
Length = 277
Score = 121 bits (303), Expect = 1e-25
Identities = 66/170 (38%), Positives = 99/170 (58%)
Frame = -1
Query: 511 MAAVNVKHDIEKLGRDTRFLLWQTRMKAILTQMDLEDALLGVDKMPASMSAEEKERKNRK 332
MA + K++IEK F LW+ +M A+L Q L AL G + +P+++S EK+ K
Sbjct: 1 MATSSTKYEIEKFNGRNDFSLWRVKMCALLVQQGLLKALKGKEHLPSNLSDSEKDDLMEK 60
Query: 331 AISQIQLHLSNEILQDFITEGSAASLWQKLEAXXXXXXXXXXXXXXXXLYSFRLAEGKSL 152
A S I L LS+E+L++ E SAA++W KLE+ LY+ +++EG S+
Sbjct: 61 AHSAILLTLSDEVLREVTDEESAAAMWFKLESIYITKSLTNRLYMKQRLYTLKMSEGTSV 120
Query: 151 QSHVDEFKSIVADLEKLDVKYEDEDXXXXXXXXLTAPFKHFRDTMLYGRD 2
+H+DEF ++ DL+ +DVK EDED L +++F DTMLYGRD
Sbjct: 121 NTHIDEFNRVILDLKNIDVKIEDEDLALILLCYLPPSYENFVDTMLYGRD 170
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 120 bits (300), Expect = 3e-25
Identities = 67/167 (40%), Positives = 101/167 (60%), Gaps = 1/167 (0%)
Frame = -1
Query: 499 NVKHDIEKLGRDTRFLLWQTRMKAILTQM-DLEDALLGVDKMPASMSAEEKERKNRKAIS 323
++K+D+ L TRF LWQ +M+A+L Q DL++AL K + ++RK+RKA+S
Sbjct: 3 SMKYDLPLLDYKTRFSLWQVKMRAVLAQTSDLDEALESFGKKKTTEWTTGEKRKDRKALS 62
Query: 322 QIQLHLSNEILQDFITEGSAASLWQKLEAXXXXXXXXXXXXXXXXLYSFRLAEGKSLQSH 143
IQLHLSN+ILQ+ + E +AA LW KLE+ L+S +L E S+ +H
Sbjct: 63 LIQLHLSNDILQEVLQEKTAAELWLKLESICMSKDLTSKMHIKMKLFSHKLQESGSVLNH 122
Query: 142 VDEFKSIVADLEKLDVKYEDEDXXXXXXXXLTAPFKHFRDTMLYGRD 2
+ FK IVADL ++V+++DED L + +++FRDT+L RD
Sbjct: 123 ISVFKEIVADLVSMEVQFDDEDLGLLLLCSLPSSYENFRDTILLSRD 169
>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
gi|108708632|gb|ABF96427.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1326
Score = 119 bits (299), Expect = 4e-25
Identities = 67/167 (40%), Positives = 100/167 (59%), Gaps = 1/167 (0%)
Frame = -1
Query: 499 NVKHDIEKLGRDTRFLLWQTRMKAILTQM-DLEDALLGVDKMPASMSAEEKERKNRKAIS 323
++K+D+ L TRF LWQ +M+AIL Q DL++AL K ++ E++RK+RKA+
Sbjct: 3 SIKYDLPLLDYKTRFSLWQVKMRAILAQTSDLDEALESFGKKKSTEWTAEEKRKDRKALL 62
Query: 322 QIQLHLSNEILQDFITEGSAASLWQKLEAXXXXXXXXXXXXXXXXLYSFRLAEGKSLQSH 143
IQLHLSN+ILQ+ + E +AA LW KLE+ L+S +L E S+ +H
Sbjct: 63 LIQLHLSNDILQEVLQEKTAAELWLKLESICMSKDLTSKMHIKMKLFSHKLQESGSVLNH 122
Query: 142 VDEFKSIVADLEKLDVKYEDEDXXXXXXXXLTAPFKHFRDTMLYGRD 2
+ FK IV DL ++V+++DED L + + +FRDT+L RD
Sbjct: 123 ISVFKEIVVDLVSIEVQFDDEDLGLLLLCSLPSSYANFRDTILLSRD 169
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 117 bits (294), Expect = 1e-24
Identities = 69/168 (41%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
Frame = -1
Query: 502 VNVKHDIEKLGRDTRFLLWQTRMKAILTQM-DLEDALLGVDKMPASMSAEEKERKNRKAI 326
+++K D+ L DTRF LWQ M+ IL Q D ++AL K A +AEE RK++KA+
Sbjct: 1 MSMKFDLPLLNYDTRFSLWQVNMRGILAQTHDYDEALDNFGKRRAEWTAEEI-RKDQKAL 59
Query: 325 SQIQLHLSNEILQDFITEGSAASLWQKLEAXXXXXXXXXXXXXXXXLYSFRLAEGKSLQS 146
+ IQLHL N+ILQ+ +TE ++A LW KLE+ L++ ++ E S+ +
Sbjct: 60 ALIQLHLHNDILQECLTEKTSAELWLKLESICMSKDLTSKMQMKMKLFTLKMKEEDSVIT 119
Query: 145 HVDEFKSIVADLEKLDVKYEDEDXXXXXXXXLTAPFKHFRDTMLYGRD 2
H+ EFK IVADL ++VKY+DED L + +FRDT+L RD
Sbjct: 120 HIAEFKKIVADLVSMEVKYDDEDLGLLLLCSLPNSYANFRDTILLSRD 167
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 117 bits (293), Expect = 2e-24
Identities = 66/167 (39%), Positives = 100/167 (59%), Gaps = 1/167 (0%)
Frame = -1
Query: 499 NVKHDIEKLGRDTRFLLWQTRMKAILTQM-DLEDALLGVDKMPASMSAEEKERKNRKAIS 323
++K+D+ L TRF LWQ +M+A+L Q DL++AL K + E++RK+RKA+S
Sbjct: 3 SMKYDLPLLDYKTRFSLWQVKMRAVLAQTSDLDEALESFGKKKTTEWTAEEKRKDRKALS 62
Query: 322 QIQLHLSNEILQDFITEGSAASLWQKLEAXXXXXXXXXXXXXXXXLYSFRLAEGKSLQSH 143
IQLHLSN+ILQ+ + + +AA LW KLE+ L+S +L E S+ +H
Sbjct: 63 LIQLHLSNDILQEVLQKKTAAELWLKLESICMSKDLTSKMHIKMKLFSHKLHESGSVLNH 122
Query: 142 VDEFKSIVADLEKLDVKYEDEDXXXXXXXXLTAPFKHFRDTMLYGRD 2
+ FK IVADL ++V+++DED L + + +FR T+L RD
Sbjct: 123 ISVFKEIVADLVSMEVQFDDEDLGLLLLCSLPSSYANFRHTILLSRD 169
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 117 bits (292), Expect = 3e-24
Identities = 69/166 (41%), Positives = 99/166 (59%), Gaps = 1/166 (0%)
Frame = -1
Query: 496 VKHDIEKLGRDTRFLLWQTRMKAILTQM-DLEDALLGVDKMPASMSAEEKERKNRKAISQ 320
+K D+ L DTRF LWQ +M+ IL Q D ++AL K A +AEE RK++KA++
Sbjct: 1 MKFDLPLLNYDTRFSLWQVKMRGILAQTHDYDEALDNFGKRRAEWTAEEI-RKDQKALAL 59
Query: 319 IQLHLSNEILQDFITEGSAASLWQKLEAXXXXXXXXXXXXXXXXLYSFRLAEGKSLQSHV 140
IQLHL N+ILQ+ +TE ++A LW KLE+ L++ ++ E S+ +H+
Sbjct: 60 IQLHLHNDILQECLTEKTSAELWLKLESICMSKDLTSKMQMKMKLFTLKMKEEDSVITHM 119
Query: 139 DEFKSIVADLEKLDVKYEDEDXXXXXXXXLTAPFKHFRDTMLYGRD 2
EFK IVADL ++VKY+DED L + +FRDT+L RD
Sbjct: 120 AEFKKIVADLVSMEVKYDDEDLGLLLLCSLPNSYANFRDTILLSRD 165
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 117 bits (292), Expect = 3e-24
Identities = 69/166 (41%), Positives = 99/166 (59%), Gaps = 1/166 (0%)
Frame = -1
Query: 496 VKHDIEKLGRDTRFLLWQTRMKAILTQM-DLEDALLGVDKMPASMSAEEKERKNRKAISQ 320
+K D+ L DTRF LWQ +M+ IL Q D ++AL K A +AEE RK++KA++
Sbjct: 1 MKFDLPLLNYDTRFSLWQVKMRGILAQTHDYDEALDNFGKRRAEWTAEEI-RKDQKALAL 59
Query: 319 IQLHLSNEILQDFITEGSAASLWQKLEAXXXXXXXXXXXXXXXXLYSFRLAEGKSLQSHV 140
IQLHL N+ILQ+ +TE ++A LW KLE+ L++ ++ E S+ +H+
Sbjct: 60 IQLHLHNDILQECLTEKTSAELWLKLESICMSKDLTSKMQMKMKLFTLKMKEEDSVITHM 119
Query: 139 DEFKSIVADLEKLDVKYEDEDXXXXXXXXLTAPFKHFRDTMLYGRD 2
EFK IVADL ++VKY+DED L + +FRDT+L RD
Sbjct: 120 AEFKKIVADLVSMEVKYDDEDLGLLLLCSLPNSYANFRDTILLSRD 165
>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
Group] gi|22655747|gb|AAN04164.1| Putative
retrotransposon protein [Oryza sativa Japonica Group]
gi|31431214|gb|AAP53029.1| retrotransposon protein,
putative, Ty1-copia subclass, expressed [Oryza sativa
Japonica Group]
Length = 1229
Score = 116 bits (291), Expect = 3e-24
Identities = 66/166 (39%), Positives = 98/166 (59%), Gaps = 1/166 (0%)
Frame = -1
Query: 496 VKHDIEKLGRDTRFLLWQTRMKAILTQM-DLEDALLGVDKMPASMSAEEKERKNRKAISQ 320
+K+D+ TRF LWQ +M+A+L Q DL++AL K + E++RK+RKA+S
Sbjct: 1 MKYDLPLQDYKTRFSLWQVKMRAVLAQTSDLDEALESFGKKKTTEWTAEEKRKDRKALSL 60
Query: 319 IQLHLSNEILQDFITEGSAASLWQKLEAXXXXXXXXXXXXXXXXLYSFRLAEGKSLQSHV 140
IQLHLSN+ILQ + E +AA LW KLE+ L+S +L E S+ +H+
Sbjct: 61 IQLHLSNDILQKVLQEKTAAELWFKLESICMSKDLTSKMHIKMKLFSHKLQESGSVLNHI 120
Query: 139 DEFKSIVADLEKLDVKYEDEDXXXXXXXXLTAPFKHFRDTMLYGRD 2
FK I+ADL ++V+++DED L + + +FRDT+L RD
Sbjct: 121 SVFKEIIADLVSMEVQFDDEDLGLLLLCSLPSLYANFRDTILLSRD 166