BLASTX nr result
ID: Rauwolfia21_contig00002166
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00002166
(1630 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003606911.1| Replication factor A 51 kDa subunit [Medicag... 58 8e-14
ref|XP_004253485.1| PREDICTED: uncharacterized protein LOC101260... 56 8e-12
gb|EOY25668.1| DNA binding protein-like [Theobroma cacao] 52 2e-09
ref|XP_006401622.1| hypothetical protein EUTSA_v10016010mg [Eutr... 47 9e-08
gb|EOY27524.1| Uncharacterized protein TCM_029362 [Theobroma cacao] 42 2e-07
ref|XP_006403240.1| hypothetical protein EUTSA_v10003346mg, part... 46 4e-07
>ref|XP_003606911.1| Replication factor A 51 kDa subunit [Medicago truncatula]
gi|357477581|ref|XP_003609076.1| Replication factor A 51
kDa subunit [Medicago truncatula]
gi|357477673|ref|XP_003609122.1| Replication factor A 51
kDa subunit [Medicago truncatula]
gi|355507966|gb|AES89108.1| Replication factor A 51 kDa
subunit [Medicago truncatula] gi|355510131|gb|AES91273.1|
Replication factor A 51 kDa subunit [Medicago truncatula]
gi|355510177|gb|AES91319.1| Replication factor A 51 kDa
subunit [Medicago truncatula]
Length = 502
Score = 57.8 bits (138), Expect(2) = 8e-14
Identities = 56/257 (21%), Positives = 96/257 (37%), Gaps = 6/257 (2%)
Frame = +1
Query: 250 NIKHCSIRSKFIPQYLEYIEEGKFYIMKNFSLQNPKPLYKVIDEELQIL-IDGSTYIKEV 426
N H +I +F P + ++EGK Y++ +F + K Y V++ +L G + E
Sbjct: 73 NCIHATIPRRFSPSLKKVLQEGKIYVISHFEVSKNKEKYAVVENNPSMLSFYGDAIVTEE 132
Query: 427 IKDMPDIDRHRFTLVSFEEVESLPGDLRVLVGKNFYDFSNIAEDVYF**KXXXXXXXXSI 606
D I R+ F V+F DL GK +
Sbjct: 133 GSDDNTIPRYIFEFVNF-------NDLIKRCGKEV------------------------L 161
Query: 607 ADVIGIITGISQVQDRISKGHHVSLQSMTIKEHR*VQMMLLDSI*FFCIY*QILTAGANK 786
ADVIG I + ++++ + V + S+ + +
Sbjct: 162 ADVIGFIIDVDPIEEKTTVNGKVDMLSLHLGD---------------------------- 193
Query: 787 FAAFLLLSRDKTLRVTLWGSLTGVID---VSSVLNTGQPQVVILTSMIMKKDDNQCA--I 951
L+VTLW + + + + T +P V I TS ++K+ C +
Sbjct: 194 -------GSGNVLKVTLWDDYAPMFNQKLIDQMHATPKPNVAIFTSTLVKQYQGNCELYV 246
Query: 952 SSSSATKIYVNLDVIEL 1002
SSS +T IY+N+D E+
Sbjct: 247 SSSRSTTIYINIDTPEV 263
Score = 47.8 bits (112), Expect(2) = 8e-14
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +3
Query: 24 YVYLNQLSKGKEDKRILVRVIRLWNTHNAQKPDEMMSIDFLILDEKV 164
+ +LN+LS D +I VRV R+W+T N K E++S D +++DEKV
Sbjct: 20 HTFLNKLSNAAPDTKIKVRVARMWDTLNITKKKEIISTDMVLIDEKV 66
>ref|XP_004253485.1| PREDICTED: uncharacterized protein LOC101260122, partial [Solanum
lycopersicum]
Length = 463
Score = 56.2 bits (134), Expect(2) = 8e-12
Identities = 53/250 (21%), Positives = 98/250 (39%)
Frame = +1
Query: 244 QNNIKHCSIRSKFIPQYLEYIEEGKFYIMKNFSLQNPKPLYKVIDEELQILIDGSTYIKE 423
+ N+ H IR + ++ + + EG +I+KNF + Y+ + L+I+ ST IK
Sbjct: 48 KGNLMHGIIRKNQVNRFKDKLNEGSVFIIKNFKVVESIGGYRPVQNSLKIIFFASTAIKN 107
Query: 424 VIKDMPDIDRHRFTLVSFEEVESLPGDLRVLVGKNFYDFSNIAEDVYF**KXXXXXXXXS 603
+ +D+ +I + F V+ ++S + VL
Sbjct: 108 LFEDIVEIPVNGFEFVNPNVIDSRVNNNIVL----------------------------- 138
Query: 604 IADVIGIITGISQVQDRISKGHHVSLQSMTIKEHR*VQMMLLDSI*FFCIY*QILTAGAN 783
+DV+G + GI ++ +SK + +T
Sbjct: 139 -SDVVGCLYGIGDIESVVSKWKKRDIHILTD----------------------------- 168
Query: 784 KFAAFLLLSRDKTLRVTLWGSLTGVIDVSSVLNTGQPQVVILTSMIMKKDDNQCAISSSS 963
L+++K +TLW N P +VI+TS +K+ + + S++
Sbjct: 169 ------YLAKEK---ITLWEEFGEKFCPYLYNNDAGPYIVIVTSTTVKEFRGEVSFSTTY 219
Query: 964 ATKIYVNLDV 993
A+KIYVNLD+
Sbjct: 220 ASKIYVNLDI 229
Score = 42.4 bits (98), Expect(2) = 8e-12
Identities = 18/46 (39%), Positives = 30/46 (65%)
Frame = +3
Query: 30 YLNQLSKGKEDKRILVRVIRLWNTHNAQKPDEMMSIDFLILDEKVN 167
+L++L G +D I VR+ R+WN N +K E++ +D + +DEK N
Sbjct: 5 FLSELVTGTDDFAIRVRICRMWNAINLKKNGELIIMDMIFIDEKGN 50
>gb|EOY25668.1| DNA binding protein-like [Theobroma cacao]
Length = 485
Score = 51.6 bits (122), Expect(2) = 2e-09
Identities = 49/259 (18%), Positives = 100/259 (38%)
Frame = +1
Query: 241 IQNNIKHCSIRSKFIPQYLEYIEEGKFYIMKNFSLQNPKPLYKVIDEELQILIDGSTYIK 420
++ N+ IR P ++ ++EG Y++ + + K + V+ E+L I++ + IK
Sbjct: 47 VKKNVMQAMIRGFDAPLFIPMLKEGAVYLIDKYRIMKSKHNFNVLPEDLMIVLSRMSEIK 106
Query: 421 EVIKDMPDIDRHRFTLVSFEEVESLPGDLRVLVGKNFYDFSNIAEDVYF**KXXXXXXXX 600
E+++D + F NF F ++ + +Y
Sbjct: 107 EIVEDNTQYPDYYF---------------------NFVHFKDLPDKIY---------KKE 136
Query: 601 SIADVIGIITGISQVQDRISKGHHVSLQSMTIKEHR*VQMMLLDSI*FFCIY*QILTAGA 780
+ DVIGI+T I+ V VQ+ D +
Sbjct: 137 ILTDVIGIVTTITLVTK--------------------VQLNNRDVL-------------V 163
Query: 781 NKFAAFLLLSRDKTLRVTLWGSLTGVIDVSSVLNTGQPQVVILTSMIMKKDDNQCAISSS 960
K ++ + ++L+V L+G + I +L V+ +++K SS
Sbjct: 164 KKRDIYIQNASYESLKVVLYGDIALSIQEQEILQRNTNVVLAFAGLMIKTYMRSLYASSC 223
Query: 961 SATKIYVNLDVIELWNFRK 1017
SAT+IY++ ++ E+ ++
Sbjct: 224 SATRIYIDPEISEVHELKQ 242
Score = 38.9 bits (89), Expect(2) = 2e-09
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +3
Query: 18 LQYVYLNQLSKGKEDKRILVRVIRLWNTHNAQKPDEMMSIDFLILDEKVN 167
+ + YL L K I V+++R+W + P ++S+DFLI D K N
Sbjct: 1 MDHEYLTDLQLFKPPTPIKVKILRIWKSTTPDNPKNLLSLDFLIADVKKN 50
>ref|XP_006401622.1| hypothetical protein EUTSA_v10016010mg [Eutrema salsugineum]
gi|557102712|gb|ESQ43075.1| hypothetical protein
EUTSA_v10016010mg [Eutrema salsugineum]
Length = 154
Score = 47.0 bits (110), Expect(2) = 9e-08
Identities = 19/49 (38%), Positives = 36/49 (73%)
Frame = +3
Query: 21 QYVYLNQLSKGKEDKRILVRVIRLWNTHNAQKPDEMMSIDFLILDEKVN 167
+Y+ L+QL++ + +R +VR+IR W N ++ +E++ I+F++LDEK N
Sbjct: 11 EYLTLDQLNRKRSYRRTVVRLIRKWEARNLKRNNELIGINFILLDEKNN 59
Score = 38.1 bits (87), Expect(2) = 9e-08
Identities = 23/93 (24%), Positives = 42/93 (45%)
Frame = +1
Query: 244 QNNIKHCSIRSKFIPQYLEYIEEGKFYIMKNFSLQNPKPLYKVIDEELQILIDGSTYIKE 423
+NN S+ + ++ + + EG + NF+LQ+ YK+ D + I + T I
Sbjct: 57 KNNTIQGSVHHSLLEKFADQLCEGNLIEVCNFNLQDCNKNYKISDHKFMIRLTERTKIAS 116
Query: 424 VIKDMPDIDRHRFTLVSFEEVESLPGDLRVLVG 522
V + I +F L ++E++ L L G
Sbjct: 117 VRQQFCQIAHEKFRLKNYEDLVKLKDTSEDLYG 149
>gb|EOY27524.1| Uncharacterized protein TCM_029362 [Theobroma cacao]
Length = 320
Score = 42.0 bits (97), Expect(2) = 2e-07
Identities = 18/81 (22%), Positives = 41/81 (50%)
Frame = +1
Query: 244 QNNIKHCSIRSKFIPQYLEYIEEGKFYIMKNFSLQNPKPLYKVIDEELQILIDGSTYIKE 423
+ N+ +R P + ++EG Y++ + + K + V+ E+L I++ + +KE
Sbjct: 48 KKNVMQAMVRGFDAPLFRLILKEGSIYLIDKYRVMKSKHNFNVLPEDLMIVLSRMSKLKE 107
Query: 424 VIKDMPDIDRHRFTLVSFEEV 486
V++D + F V F+++
Sbjct: 108 VVEDSSQYPDYYFNFVHFKDL 128
Score = 41.6 bits (96), Expect(2) = 2e-07
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +3
Query: 18 LQYVYLNQLSKGKEDKRILVRVIRLWNTHNAQKPDEMMSIDFLILDEKVN 167
+ Y YL L K I V+++R+W + P+ +S+DFLI D K N
Sbjct: 1 MDYQYLTDLQLFKPPATIKVKILRIWKSTTPDNPENRLSLDFLIADAKKN 50
>ref|XP_006403240.1| hypothetical protein EUTSA_v10003346mg, partial [Eutrema
salsugineum] gi|557104353|gb|ESQ44693.1| hypothetical
protein EUTSA_v10003346mg, partial [Eutrema salsugineum]
Length = 205
Score = 46.2 bits (108), Expect(2) = 4e-07
Identities = 19/49 (38%), Positives = 36/49 (73%)
Frame = +3
Query: 21 QYVYLNQLSKGKEDKRILVRVIRLWNTHNAQKPDEMMSIDFLILDEKVN 167
+Y+ L+QL++ + +R +VR+IR W N ++ +E++ I+FL+LDE+ N
Sbjct: 11 EYLTLDQLNRKRSYRRTVVRLIRKWEAKNLKRNNELIGINFLLLDERNN 59
Score = 36.6 bits (83), Expect(2) = 4e-07
Identities = 20/84 (23%), Positives = 40/84 (47%)
Frame = +1
Query: 244 QNNIKHCSIRSKFIPQYLEYIEEGKFYIMKNFSLQNPKPLYKVIDEELQILIDGSTYIKE 423
+NN ++ + ++ + + EG + NF+LQ+ YK+ D + I + T I
Sbjct: 57 RNNTIQGTVHHSLLEKFADQLCEGNLIEICNFNLQDCNKNYKISDHKFMIRLTERTKIAS 116
Query: 424 VIKDMPDIDRHRFTLVSFEEVESL 495
V + I +F L ++E++ L
Sbjct: 117 VGQQFCQIAHEKFRLKNYEDLAKL 140