BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00000241
         (983 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subun...   313   6e-83
sp|Q02980.1|RBS_MALSP RecName: Full=Ribulose bisphosphate carbox...   311   2e-82
ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chai...   309   9e-82
sp|P24007.1|RBS_PYRPY RecName: Full=Ribulose bisphosphate carbox...   309   1e-81
ref|XP_004303137.1| PREDICTED: ribulose bisphosphate carboxylase...   308   3e-81
gb|ABS72189.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s...   307   4e-81
ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chai...   304   3e-80
gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/ox...   304   4e-80
dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...   303   7e-80
dbj|BAI53120.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...   303   9e-80
dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...   303   9e-80
gb|EMJ16250.1| hypothetical protein PRUPE_ppa012123mg [Prunus pe...   302   1e-79
gb|AFK42721.1| unknown [Lotus japonicus]                              300   4e-79
dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...   300   6e-79
sp|P29684.1|RBS_HEVBR RecName: Full=Ribulose bisphosphate carbox...   300   7e-79
gb|AFS41724.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s...   298   2e-78
gb|AFS41744.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s...   298   2e-78
gb|AEX60841.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s...   298   2e-78
gb|AFK48034.1| unknown [Lotus japonicus]                              298   3e-78
sp|P69249.1|RBS_TOBAC RecName: Full=Ribulose bisphosphate carbox...   297   4e-78

>gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subunit [Malus
           domestica x Pyrus communis]
          Length = 179

 Score =  313 bits (802), Expect = 6e-83
 Identities = 149/178 (83%), Positives = 161/178 (90%)
 Frame = -3

Query: 780 MASSMISTAAVATRSSPAQASMVAPFTGLKSASAFPVTKKSADFTSLASNGGRVQCMQVY 601
           MASSMIS+  VAT S+PAQA MVAPFTGLKS+SAFPVT+KS D TS+ASNGGRVQCMQV+
Sbjct: 1   MASSMISSGTVATVSAPAQARMVAPFTGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVW 60

Query: 600 PPRGKKKFETLSYLPPLTQKQLASEVDYLLRKGWIPCLEFELEHGFVYRENHRSPGYYDG 421
           PP G KKFETLSYLPPL+ + LA EVDYLLRK W+PCLEFELEHGFVYREN+RSPGYYDG
Sbjct: 61  PPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENNRSPGYYDG 120

Query: 420 HYWTMWKLPMFGCNDSAQVLKELEEAKKEYPDAFIRIIGFDNVRQVQCISFIAYKPAG 247
            YWTMWKLPMFGC DS+QVLKELEEAKK YP +FIRIIGFDNVRQVQCISFIAYKP G
Sbjct: 121 RYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPPG 178


>sp|Q02980.1|RBS_MALSP RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|19581|emb|CAA46475.1| ribulose bisphosphate
           carboxylase [Malus sp.]
          Length = 183

 Score =  311 bits (797), Expect = 2e-82
 Identities = 150/183 (81%), Positives = 162/183 (88%), Gaps = 4/183 (2%)
 Frame = -3

Query: 780 MASSMISTAAVAT----RSSPAQASMVAPFTGLKSASAFPVTKKSADFTSLASNGGRVQC 613
           MASSMIS+  VAT    R +PAQA MVAPFTGLKS+SA PVT+KS D TS+ASNGGRVQC
Sbjct: 1   MASSMISSGTVATVSADRPAPAQARMVAPFTGLKSSSASPVTRKSNDITSIASNGGRVQC 60

Query: 612 MQVYPPRGKKKFETLSYLPPLTQKQLASEVDYLLRKGWIPCLEFELEHGFVYRENHRSPG 433
           MQV+PP G KKFETLSYLPPL+ + LA EVDYLLRK W+PCLEFELEHGFVYRENHRSPG
Sbjct: 61  MQVWPPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENHRSPG 120

Query: 432 YYDGHYWTMWKLPMFGCNDSAQVLKELEEAKKEYPDAFIRIIGFDNVRQVQCISFIAYKP 253
           YYDG YWTMWKLPMFGC DS+QVLKELEEAKK YP +FIRIIGFDNVRQVQCISFIAYKP
Sbjct: 121 YYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKP 180

Query: 252 AGY 244
           AG+
Sbjct: 181 AGF 183


>ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chain 1B, chloroplast
           precursor, putative [Ricinus communis]
           gi|223539597|gb|EEF41184.1| Ribulose bisphosphate
           carboxylase small chain 1B, chloroplast precursor,
           putative [Ricinus communis]
          Length = 181

 Score =  309 bits (792), Expect = 9e-82
 Identities = 150/180 (83%), Positives = 166/180 (92%), Gaps = 1/180 (0%)
 Frame = -3

Query: 780 MASSMISTAAVATRSSPAQASMVAPFTGLKSASAFPVTKKSA-DFTSLASNGGRVQCMQV 604
           MASSMIS+A+V+ RSSPAQA+MVAPFTGLKSA++FPVT+K+  D TS+ASNGGRVQCMQV
Sbjct: 1   MASSMISSASVS-RSSPAQATMVAPFTGLKSAASFPVTRKANNDITSIASNGGRVQCMQV 59

Query: 603 YPPRGKKKFETLSYLPPLTQKQLASEVDYLLRKGWIPCLEFELEHGFVYRENHRSPGYYD 424
           +PP GKKKFETLSYLP LT +QLA EVDYLLRKGWIPCLEFELEHGFVYRENHRSPGYYD
Sbjct: 60  WPPLGKKKFETLSYLPDLTDEQLAKEVDYLLRKGWIPCLEFELEHGFVYRENHRSPGYYD 119

Query: 423 GHYWTMWKLPMFGCNDSAQVLKELEEAKKEYPDAFIRIIGFDNVRQVQCISFIAYKPAGY 244
           G YWTMWKLPMFGC+DS QVLKEL+EAKK YP++FIRIIGFDN RQVQCISFIAYKP  +
Sbjct: 120 GRYWTMWKLPMFGCSDSTQVLKELDEAKKAYPNSFIRIIGFDNRRQVQCISFIAYKPTTF 179


>sp|P24007.1|RBS_PYRPY RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|218021|dbj|BAA00450.1| RuBisCO small
           subunit [Pyrus pyrifolia var. culta]
          Length = 183

 Score =  309 bits (791), Expect = 1e-81
 Identities = 149/183 (81%), Positives = 161/183 (87%), Gaps = 4/183 (2%)
 Frame = -3

Query: 780 MASSMISTAAVAT----RSSPAQASMVAPFTGLKSASAFPVTKKSADFTSLASNGGRVQC 613
           MASSMIS+  VAT    R +PAQA MVAPF GLKS+SAFPVT+KS D TS+ASNGGRVQC
Sbjct: 1   MASSMISSGTVATVSADRPAPAQARMVAPFNGLKSSSAFPVTRKSNDITSIASNGGRVQC 60

Query: 612 MQVYPPRGKKKFETLSYLPPLTQKQLASEVDYLLRKGWIPCLEFELEHGFVYRENHRSPG 433
           MQV+PP G KKFETLSYLPPL+ + LA EVDYLLRK W+PCLEFELE GFVYRENHRSPG
Sbjct: 61  MQVWPPLGLKKFETLSYLPPLSSESLAKEVDYLLRKNWVPCLEFELETGFVYRENHRSPG 120

Query: 432 YYDGHYWTMWKLPMFGCNDSAQVLKELEEAKKEYPDAFIRIIGFDNVRQVQCISFIAYKP 253
           YYDG YWTMWKLPMFGC DS+QVLKELEEAKK YP +FIRIIGFDNVRQVQCISFIAYKP
Sbjct: 121 YYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKP 180

Query: 252 AGY 244
           AG+
Sbjct: 181 AGF 183


>ref|XP_004303137.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 182

 Score =  308 bits (788), Expect = 3e-81
 Identities = 150/182 (82%), Positives = 164/182 (90%), Gaps = 3/182 (1%)
 Frame = -3

Query: 780 MASSMIST--AAVATRSSPAQASMVAPFTGLKSASAFPVTKKS-ADFTSLASNGGRVQCM 610
           MASSM S+  AAVAT +SPAQASMVAPFTGLKSASAFP+T+K+ +D TSL SNGGRVQCM
Sbjct: 1   MASSMFSSSAAAVATAASPAQASMVAPFTGLKSASAFPITRKTNSDITSLPSNGGRVQCM 60

Query: 609 QVYPPRGKKKFETLSYLPPLTQKQLASEVDYLLRKGWIPCLEFELEHGFVYRENHRSPGY 430
           QV+PP G KKFETLSYLPPLT + LA EVD+LLR  W+PCLEFELE GFVYRENH+SPGY
Sbjct: 61  QVWPPVGLKKFETLSYLPPLTSESLAKEVDFLLRNKWVPCLEFELEKGFVYRENHKSPGY 120

Query: 429 YDGHYWTMWKLPMFGCNDSAQVLKELEEAKKEYPDAFIRIIGFDNVRQVQCISFIAYKPA 250
           YDG YWTMWKLPMFGC D++QVLKELEEAKK YP+AFIRIIGFDNVRQVQCISFIAYKPA
Sbjct: 121 YDGRYWTMWKLPMFGCTDASQVLKELEEAKKAYPNAFIRIIGFDNVRQVQCISFIAYKPA 180

Query: 249 GY 244
           GY
Sbjct: 181 GY 182


>gb|ABS72189.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit 1A
           [Corchorus olitorius]
          Length = 183

 Score =  307 bits (787), Expect = 4e-81
 Identities = 147/181 (81%), Positives = 161/181 (88%), Gaps = 1/181 (0%)
 Frame = -3

Query: 780 MASSMISTAAVATRSSPAQASMVAPFTGLKSASAFPVTKKS-ADFTSLASNGGRVQCMQV 604
           MAS+M+S+A V  R+SPAQA++VAPFTGLKSASAFP T+K+  D TS+ASNGGRVQCMQV
Sbjct: 1   MASAMMSSATVVNRASPAQATLVAPFTGLKSASAFPTTRKNNRDITSIASNGGRVQCMQV 60

Query: 603 YPPRGKKKFETLSYLPPLTQKQLASEVDYLLRKGWIPCLEFELEHGFVYRENHRSPGYYD 424
           +PP GKKKFETLSYLP LT  QLA EVDYLLR GWIPCLEFELEHGFVYRE+H SPGYYD
Sbjct: 61  WPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSGWIPCLEFELEHGFVYREHHHSPGYYD 120

Query: 423 GHYWTMWKLPMFGCNDSAQVLKELEEAKKEYPDAFIRIIGFDNVRQVQCISFIAYKPAGY 244
           G YWTMWKLPMFGC DS+QVLKELEEAKK YPDAFIRIIGFDN RQVQCISFIAYKP  +
Sbjct: 121 GRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPDAFIRIIGFDNRRQVQCISFIAYKPPSF 180

Query: 243 E 241
           +
Sbjct: 181 K 181


>ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chain, chloroplast
           precursor, putative [Ricinus communis]
           gi|223528159|gb|EEF30223.1| Ribulose bisphosphate
           carboxylase small chain, chloroplast precursor, putative
           [Ricinus communis]
          Length = 185

 Score =  304 bits (779), Expect = 3e-80
 Identities = 146/183 (79%), Positives = 166/183 (90%), Gaps = 3/183 (1%)
 Frame = -3

Query: 780 MASSMISTAAVAT--RSSPAQASMVAPFTGLKSASAFPVTKKS-ADFTSLASNGGRVQCM 610
           MASSM+STA VA+  R+SPAQASMVAPFTGLKS SAFPVT+K+  D T+LA+NGGRVQCM
Sbjct: 1   MASSMLSTATVASLNRASPAQASMVAPFTGLKSTSAFPVTRKTNTDITTLANNGGRVQCM 60

Query: 609 QVYPPRGKKKFETLSYLPPLTQKQLASEVDYLLRKGWIPCLEFELEHGFVYRENHRSPGY 430
           QV+PP GKKKFETLSYLP LT++QLA EV+YLLRKGW+PCLEFELEHGFVYREN RSPGY
Sbjct: 61  QVWPPLGKKKFETLSYLPDLTREQLAKEVEYLLRKGWVPCLEFELEHGFVYRENARSPGY 120

Query: 429 YDGHYWTMWKLPMFGCNDSAQVLKELEEAKKEYPDAFIRIIGFDNVRQVQCISFIAYKPA 250
           YDG YWTMWKLPMFGC+D+ QVLKEL+EA K YP++F+RIIGFDNVRQVQCISFIAYKP 
Sbjct: 121 YDGRYWTMWKLPMFGCSDAVQVLKELDEAIKAYPNSFVRIIGFDNVRQVQCISFIAYKPP 180

Query: 249 GYE 241
            ++
Sbjct: 181 SFK 183


>gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit [Aralia elata]
          Length = 183

 Score =  304 bits (778), Expect = 4e-80
 Identities = 144/178 (80%), Positives = 162/178 (91%), Gaps = 2/178 (1%)
 Frame = -3

Query: 780 MASSMISTAAVA--TRSSPAQASMVAPFTGLKSASAFPVTKKSADFTSLASNGGRVQCMQ 607
           MASS+IS+A+VA  +R++PAQASMVAPFTGLKS +AFPVT+K  D TSL SNGGRVQCM+
Sbjct: 1   MASSVISSASVAAVSRAAPAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMK 60

Query: 606 VYPPRGKKKFETLSYLPPLTQKQLASEVDYLLRKGWIPCLEFELEHGFVYRENHRSPGYY 427
           V+PP G KKFETLSYLPPLT ++LA EVDYLLR GW+PCLEFELEHG+VYRENHRSPGYY
Sbjct: 61  VWPPLGLKKFETLSYLPPLTNEELAKEVDYLLRSGWVPCLEFELEHGWVYRENHRSPGYY 120

Query: 426 DGHYWTMWKLPMFGCNDSAQVLKELEEAKKEYPDAFIRIIGFDNVRQVQCISFIAYKP 253
           DG YWTMWKLPMFGC DS+QVL E+EE KKEYP+AFIRIIGFDNVRQVQCISFIA+KP
Sbjct: 121 DGRYWTMWKLPMFGCTDSSQVLNEVEECKKEYPNAFIRIIGFDNVRQVQCISFIAFKP 178


>dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Eucalyptus globulus]
          Length = 181

 Score =  303 bits (776), Expect = 7e-80
 Identities = 146/181 (80%), Positives = 157/181 (86%), Gaps = 2/181 (1%)
 Frame = -3

Query: 780 MASSMISTAAVAT--RSSPAQASMVAPFTGLKSASAFPVTKKSADFTSLASNGGRVQCMQ 607
           MASSM+S+AAVA    +SP QA+MVAPFTGLKSASAFPVT+KS D TSL SNGGRVQCMQ
Sbjct: 1   MASSMLSSAAVAAVKSTSPVQAAMVAPFTGLKSASAFPVTRKSNDITSLPSNGGRVQCMQ 60

Query: 606 VYPPRGKKKFETLSYLPPLTQKQLASEVDYLLRKGWIPCLEFELEHGFVYRENHRSPGYY 427
           V+PP G KKFETLSYLPPLT  QLA E+DYLLR GW+PCLEFE E GFVYRE+H SPGYY
Sbjct: 61  VWPPVGLKKFETLSYLPPLTPTQLAKEIDYLLRSGWVPCLEFETEKGFVYREHHHSPGYY 120

Query: 426 DGHYWTMWKLPMFGCNDSAQVLKELEEAKKEYPDAFIRIIGFDNVRQVQCISFIAYKPAG 247
           DG YWTMWKLPMFGC DSAQVLKELEE KK YP AF+RIIGFDN RQVQCISFIA+KP G
Sbjct: 121 DGRYWTMWKLPMFGCTDSAQVLKELEECKKAYPTAFVRIIGFDNKRQVQCISFIAFKPPG 180

Query: 246 Y 244
           Y
Sbjct: 181 Y 181


>dbj|BAI53120.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Eucalyptus globulus]
          Length = 179

 Score =  303 bits (775), Expect = 9e-80
 Identities = 146/179 (81%), Positives = 162/179 (90%), Gaps = 1/179 (0%)
 Frame = -3

Query: 777 ASSMISTAAVATRSSPAQASMVAPFTGLKSASAFPVTKKSA-DFTSLASNGGRVQCMQVY 601
           ++SM+S+ AV  R++PAQA+MVAPFTGLKSASAFPVT+KS+ D TSL+SNGGRVQCMQV+
Sbjct: 3   SASMLSSPAV--RATPAQATMVAPFTGLKSASAFPVTRKSSEDITSLSSNGGRVQCMQVW 60

Query: 600 PPRGKKKFETLSYLPPLTQKQLASEVDYLLRKGWIPCLEFELEHGFVYRENHRSPGYYDG 421
           PP GKKKFETLSYLPPL+ + LA EVDYLLR GW+PCLEFELEHGFVYRE+H SPGYYDG
Sbjct: 61  PPIGKKKFETLSYLPPLSPESLAKEVDYLLRSGWVPCLEFELEHGFVYREHHSSPGYYDG 120

Query: 420 HYWTMWKLPMFGCNDSAQVLKELEEAKKEYPDAFIRIIGFDNVRQVQCISFIAYKPAGY 244
            YWTMWKLPMFGC DSAQVLKELEEAKK YP AFIRIIGFDN RQVQCISFIAYKP G+
Sbjct: 121 RYWTMWKLPMFGCTDSAQVLKELEEAKKAYPTAFIRIIGFDNKRQVQCISFIAYKPPGF 179


>dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Eucalyptus globulus]
          Length = 181

 Score =  303 bits (775), Expect = 9e-80
 Identities = 143/181 (79%), Positives = 162/181 (89%), Gaps = 2/181 (1%)
 Frame = -3

Query: 780 MASSMISTAAVAT--RSSPAQASMVAPFTGLKSASAFPVTKKSADFTSLASNGGRVQCMQ 607
           MASS++S+AAVA   R+SPAQASMVAPFTGLKSASAFPVT+KSAD TSLASNGGRVQCMQ
Sbjct: 1   MASSIVSSAAVAAVNRASPAQASMVAPFTGLKSASAFPVTRKSADITSLASNGGRVQCMQ 60

Query: 606 VYPPRGKKKFETLSYLPPLTQKQLASEVDYLLRKGWIPCLEFELEHGFVYRENHRSPGYY 427
           V+PP GKKKFETLSYLPPL++++L  E++YLLR  W+PCLEFELE GFVYR+NH+SPGYY
Sbjct: 61  VWPPIGKKKFETLSYLPPLSREELLKEIEYLLRMNWVPCLEFELEKGFVYRDNHKSPGYY 120

Query: 426 DGHYWTMWKLPMFGCNDSAQVLKELEEAKKEYPDAFIRIIGFDNVRQVQCISFIAYKPAG 247
           DG YWTMWKLPMFGC D  QV KEL+EA K YP+AF+RIIGFDN RQVQCISFIAYKP G
Sbjct: 121 DGRYWTMWKLPMFGCTDPLQVFKELDEAIKTYPNAFVRIIGFDNKRQVQCISFIAYKPPG 180

Query: 246 Y 244
           +
Sbjct: 181 F 181


>gb|EMJ16250.1| hypothetical protein PRUPE_ppa012123mg [Prunus persica]
          Length = 183

 Score =  302 bits (774), Expect = 1e-79
 Identities = 147/183 (80%), Positives = 162/183 (88%), Gaps = 4/183 (2%)
 Frame = -3

Query: 780 MASSMISTAAVAT----RSSPAQASMVAPFTGLKSASAFPVTKKSADFTSLASNGGRVQC 613
           MASSMIS+A VA+    R++PAQAS+VAPFTGLKSASAFP  KK+ D TS+ASNGGRVQC
Sbjct: 1   MASSMISSATVASVYADRAAPAQASLVAPFTGLKSASAFPGAKKTNDITSIASNGGRVQC 60

Query: 612 MQVYPPRGKKKFETLSYLPPLTQKQLASEVDYLLRKGWIPCLEFELEHGFVYRENHRSPG 433
           M+V+P  G KKFETLSYLPPL+ + LA EVDYLLRK W+PCLEFELE GFVYRENHRSPG
Sbjct: 61  MKVWPTVGLKKFETLSYLPPLSPESLAKEVDYLLRKNWVPCLEFELEKGFVYRENHRSPG 120

Query: 432 YYDGHYWTMWKLPMFGCNDSAQVLKELEEAKKEYPDAFIRIIGFDNVRQVQCISFIAYKP 253
           YYDG YWTMWKLPMFGC DS+QVLKELEEAKK  P++FIRIIGFDNVRQVQCISFIAYKP
Sbjct: 121 YYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKANPNSFIRIIGFDNVRQVQCISFIAYKP 180

Query: 252 AGY 244
           AGY
Sbjct: 181 AGY 183


>gb|AFK42721.1| unknown [Lotus japonicus]
          Length = 182

 Score =  300 bits (769), Expect = 4e-79
 Identities = 142/182 (78%), Positives = 162/182 (89%), Gaps = 3/182 (1%)
 Frame = -3

Query: 780 MASSMISTAAVATR---SSPAQASMVAPFTGLKSASAFPVTKKSADFTSLASNGGRVQCM 610
           MASSMI+++A AT    +SPAQASMVAPFTGLKS + FPV K + D TS+ASNGGRVQCM
Sbjct: 1   MASSMITSSAAATTIKGASPAQASMVAPFTGLKSMAGFPVRKANNDITSIASNGGRVQCM 60

Query: 609 QVYPPRGKKKFETLSYLPPLTQKQLASEVDYLLRKGWIPCLEFELEHGFVYRENHRSPGY 430
           QV+PP GKKKFETLSYLPPLT +QL  EV+YLLRKGW+PCLEFE E GFVYRENH+SPGY
Sbjct: 61  QVWPPIGKKKFETLSYLPPLTTEQLLKEVEYLLRKGWVPCLEFETEKGFVYRENHKSPGY 120

Query: 429 YDGHYWTMWKLPMFGCNDSAQVLKELEEAKKEYPDAFIRIIGFDNVRQVQCISFIAYKPA 250
           YDG YWTMWKLPMFGC+D+AQVLKEL+EA + YP+AF+RIIGFDNVRQVQCISFIA++PA
Sbjct: 121 YDGRYWTMWKLPMFGCSDAAQVLKELDEAVRAYPNAFVRIIGFDNVRQVQCISFIAHRPA 180

Query: 249 GY 244
           GY
Sbjct: 181 GY 182


>dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Panax ginseng]
          Length = 183

 Score =  300 bits (768), Expect = 6e-79
 Identities = 143/178 (80%), Positives = 160/178 (89%), Gaps = 2/178 (1%)
 Frame = -3

Query: 780 MASSMISTAAVA--TRSSPAQASMVAPFTGLKSASAFPVTKKSADFTSLASNGGRVQCMQ 607
           MASS+IS+A VA  +R+ PAQASMVAPFTGLKS +AFPVT+K  D TSL SNGGRVQCM+
Sbjct: 1   MASSVISSATVAAVSRAVPAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMK 60

Query: 606 VYPPRGKKKFETLSYLPPLTQKQLASEVDYLLRKGWIPCLEFELEHGFVYRENHRSPGYY 427
           V+PP G KKFETLSYLP LTQ+QL+ EVDYLLR GW+PCLEFELEHGFVYRE+H SPGYY
Sbjct: 61  VWPPLGLKKFETLSYLPQLTQEQLSKEVDYLLRSGWVPCLEFELEHGFVYREHHHSPGYY 120

Query: 426 DGHYWTMWKLPMFGCNDSAQVLKELEEAKKEYPDAFIRIIGFDNVRQVQCISFIAYKP 253
           DG YWTMWKLPMFGC DS+QVLKE+EE KKEYP+A+IRIIGFDNVRQVQCISFIA+KP
Sbjct: 121 DGRYWTMWKLPMFGCTDSSQVLKEVEECKKEYPNAYIRIIGFDNVRQVQCISFIAFKP 178


>sp|P29684.1|RBS_HEVBR RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|168217|gb|AAA33361.1|
           ribulose-1,5-bisphosphate carboxylase small subunit
           [Hevea brasiliensis]
          Length = 183

 Score =  300 bits (767), Expect = 7e-79
 Identities = 145/183 (79%), Positives = 161/183 (87%), Gaps = 3/183 (1%)
 Frame = -3

Query: 780 MASSMISTAAVA--TRSSPAQASMVAPFTGLKSASAFPVTKKSA-DFTSLASNGGRVQCM 610
           MASSM+STAAVA   R+SPAQASMVAPFTGLKS SAFP T+K+  D TS+ASNGGRVQCM
Sbjct: 1   MASSMLSTAAVACINRASPAQASMVAPFTGLKSTSAFPTTRKTTTDITSIASNGGRVQCM 60

Query: 609 QVYPPRGKKKFETLSYLPPLTQKQLASEVDYLLRKGWIPCLEFELEHGFVYRENHRSPGY 430
           QV+PPRGKK +ETLSYLPPLT++QLA EV+YLLRKGW+PCLEFELEHG VYRE HRSPGY
Sbjct: 61  QVWPPRGKKFYETLSYLPPLTREQLAKEVEYLLRKGWVPCLEFELEHGTVYREYHRSPGY 120

Query: 429 YDGHYWTMWKLPMFGCNDSAQVLKELEEAKKEYPDAFIRIIGFDNVRQVQCISFIAYKPA 250
           YDG YWTMWKLPMFGC D+ QVL+EL+E  K YPD + RIIGFDNVRQVQCISF+AYKP 
Sbjct: 121 YDGRYWTMWKLPMFGCTDAVQVLQELDEMIKAYPDCYGRIIGFDNVRQVQCISFLAYKPK 180

Query: 249 GYE 241
           G E
Sbjct: 181 GAE 183


>gb|AFS41724.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           (chloroplast) [Gossypium raimondii]
          Length = 182

 Score =  298 bits (764), Expect = 2e-78
 Identities = 150/182 (82%), Positives = 159/182 (87%), Gaps = 3/182 (1%)
 Frame = -3

Query: 780 MASSMISTAAVAT--RSSPAQASMVAPFTGLKSASAFPVTKKSA-DFTSLASNGGRVQCM 610
           MASSMIS+A +AT  RSSPAQA+MVAPFTGLKSASAFPVT+K+  D TSLASNGGRVQCM
Sbjct: 1   MASSMISSATIATVNRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCM 60

Query: 609 QVYPPRGKKKFETLSYLPPLTQKQLASEVDYLLRKGWIPCLEFELEHGFVYRENHRSPGY 430
           QV+PP GKKKFETLSYLP LT  QLA EVDYLLR  WIPCLEFELE GFV+R+    P Y
Sbjct: 61  QVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSNLPTY 120

Query: 429 YDGHYWTMWKLPMFGCNDSAQVLKELEEAKKEYPDAFIRIIGFDNVRQVQCISFIAYKPA 250
           YDG YWTMWKLPMFGC DSAQVLKELEE KKEYP+AFIRIIGFDNVRQVQCISFIAYKP 
Sbjct: 121 YDGRYWTMWKLPMFGCTDSAQVLKELEECKKEYPNAFIRIIGFDNVRQVQCISFIAYKPE 180

Query: 249 GY 244
           GY
Sbjct: 181 GY 182


>gb|AFS41744.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           (chloroplast) [Gossypium tomentosum]
          Length = 182

 Score =  298 bits (763), Expect = 2e-78
 Identities = 150/182 (82%), Positives = 159/182 (87%), Gaps = 3/182 (1%)
 Frame = -3

Query: 780 MASSMISTAAVAT--RSSPAQASMVAPFTGLKSASAFPVTKKSA-DFTSLASNGGRVQCM 610
           MASSMIS+A +AT  RSSPAQA+MVAPFTGLKSASAFPVT+K+  D TSLASNGGRVQCM
Sbjct: 1   MASSMISSATIATVNRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCM 60

Query: 609 QVYPPRGKKKFETLSYLPPLTQKQLASEVDYLLRKGWIPCLEFELEHGFVYRENHRSPGY 430
           QV+PP GKKKFETLSYLP LT  QLA EVDYLLR  WIPCLEFELE GFV+R+    P Y
Sbjct: 61  QVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSSLPTY 120

Query: 429 YDGHYWTMWKLPMFGCNDSAQVLKELEEAKKEYPDAFIRIIGFDNVRQVQCISFIAYKPA 250
           YDG YWTMWKLPMFGC DSAQVLKELEE KKEYP+AFIRIIGFDNVRQVQCISFIAYKP 
Sbjct: 121 YDGRYWTMWKLPMFGCTDSAQVLKELEECKKEYPNAFIRIIGFDNVRQVQCISFIAYKPK 180

Query: 249 GY 244
           GY
Sbjct: 181 GY 182


>gb|AEX60841.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           (chloroplast) [Gossypium hirsutum]
           gi|406366462|gb|AFS41728.1| ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit (chloroplast)
           [Gossypium hirsutum] gi|406366476|gb|AFS41735.1|
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit (chloroplast) [Gossypium barbadense]
           gi|406366492|gb|AFS41743.1| ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit (chloroplast)
           [Gossypium tomentosum] gi|406366506|gb|AFS41750.1|
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit (chloroplast) [Gossypium mustelinum]
           gi|406366520|gb|AFS41757.1| ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit (chloroplast)
           [Gossypium darwinii]
          Length = 182

 Score =  298 bits (763), Expect = 2e-78
 Identities = 150/182 (82%), Positives = 159/182 (87%), Gaps = 3/182 (1%)
 Frame = -3

Query: 780 MASSMISTAAVAT--RSSPAQASMVAPFTGLKSASAFPVTKKSA-DFTSLASNGGRVQCM 610
           MASSMIS+A +AT  RSSPAQA+MVAPFTGLKSASAFPVT+K+  D TSLASNGGRVQCM
Sbjct: 1   MASSMISSATIATVNRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCM 60

Query: 609 QVYPPRGKKKFETLSYLPPLTQKQLASEVDYLLRKGWIPCLEFELEHGFVYRENHRSPGY 430
           QV+PP GKKKFETLSYLP LT  QLA EVDYLLR  WIPCLEFELE GFV+R+    P Y
Sbjct: 61  QVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSSLPTY 120

Query: 429 YDGHYWTMWKLPMFGCNDSAQVLKELEEAKKEYPDAFIRIIGFDNVRQVQCISFIAYKPA 250
           YDG YWTMWKLPMFGC DSAQVLKELEE KKEYP+AFIRIIGFDNVRQVQCISFIAYKP 
Sbjct: 121 YDGRYWTMWKLPMFGCTDSAQVLKELEECKKEYPNAFIRIIGFDNVRQVQCISFIAYKPE 180

Query: 249 GY 244
           GY
Sbjct: 181 GY 182


>gb|AFK48034.1| unknown [Lotus japonicus]
          Length = 181

 Score =  298 bits (762), Expect = 3e-78
 Identities = 140/181 (77%), Positives = 161/181 (88%), Gaps = 2/181 (1%)
 Frame = -3

Query: 780 MASSMISTAAVAT--RSSPAQASMVAPFTGLKSASAFPVTKKSADFTSLASNGGRVQCMQ 607
           MASSMI+++AV T   +SPAQA+MVAPFTGLKS + FPV K + D TS+A+NGGRVQCMQ
Sbjct: 1   MASSMITSSAVTTINSASPAQANMVAPFTGLKSMAGFPVRKVNNDITSIANNGGRVQCMQ 60

Query: 606 VYPPRGKKKFETLSYLPPLTQKQLASEVDYLLRKGWIPCLEFELEHGFVYRENHRSPGYY 427
           V+PP GKKKFETLSYLPPLT +QL  EV+YLLRKGW+PCLEFE E GFVYRENH+SPGYY
Sbjct: 61  VWPPIGKKKFETLSYLPPLTTEQLLKEVEYLLRKGWVPCLEFETEKGFVYRENHKSPGYY 120

Query: 426 DGHYWTMWKLPMFGCNDSAQVLKELEEAKKEYPDAFIRIIGFDNVRQVQCISFIAYKPAG 247
           DG YWTMWKLPMFGC+D+ QVLKEL+EA K YP+AF+RIIGFDNVRQVQCISFIA++PAG
Sbjct: 121 DGRYWTMWKLPMFGCSDATQVLKELDEAVKAYPNAFVRIIGFDNVRQVQCISFIAHRPAG 180

Query: 246 Y 244
           Y
Sbjct: 181 Y 181


>sp|P69249.1|RBS_TOBAC RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; AltName:
           Full=TSSU3-8; Flags: Precursor
           gi|59800184|sp|P69250.1|RBS1_NICSY RecName:
           Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|19760|emb|CAA25862.1| unnamed protein
           product [Nicotiana sylvestris] gi|20024|emb|CAA26208.1|
           small subunit ribulose 1,5-bisphosphate carboxylase
           [Nicotiana tabacum] gi|224384|prf||1103193A
           carboxylase,RBP
          Length = 180

 Score =  297 bits (761), Expect = 4e-78
 Identities = 140/180 (77%), Positives = 163/180 (90%), Gaps = 1/180 (0%)
 Frame = -3

Query: 780 MASSMISTAAVATRSSPAQASMVAPFTGLKSASAFPVTKK-SADFTSLASNGGRVQCMQV 604
           MASS++S+AAVATRS+ AQA+MVAPFTGLKSA++FPV++K + D TS+ASNGGRVQCMQV
Sbjct: 1   MASSVLSSAAVATRSNVAQANMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQV 60

Query: 603 YPPRGKKKFETLSYLPPLTQKQLASEVDYLLRKGWIPCLEFELEHGFVYRENHRSPGYYD 424
           +PP  KKK+ETLSYLP L+Q+QL SEV+YLL+ GW+PCLEFE EHGFVYREN++SPGYYD
Sbjct: 61  WPPINKKKYETLSYLPDLSQEQLLSEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYD 120

Query: 423 GHYWTMWKLPMFGCNDSAQVLKELEEAKKEYPDAFIRIIGFDNVRQVQCISFIAYKPAGY 244
           G YWTMWKLPMFGC D+ QVL E+EEAKK YP A+IRIIGFDNVRQVQCISFIAYKP GY
Sbjct: 121 GRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEGY 180