BLASTX nr result

ID: Rauwolfia21_contig00000235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00000235
         (762 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001068396.1| Os11g0657300 [Oryza sativa Japonica Group] g...   152   2e-34
ref|NP_001046068.1| Os02g0177500 [Oryza sativa Japonica Group] g...   152   2e-34
gb|AFK45150.1| unknown [Lotus japonicus]                              151   2e-34
ref|XP_003549441.1| PREDICTED: probable small nuclear ribonucleo...   151   2e-34
ref|XP_003555743.1| PREDICTED: probable small nuclear ribonucleo...   151   2e-34
gb|ACU13643.1| unknown [Glycine max]                                  151   2e-34
ref|XP_006848141.1| hypothetical protein AMTR_s00029p00226370 [A...   151   3e-34
ref|XP_004951718.1| PREDICTED: probable small nuclear ribonucleo...   151   3e-34
ref|XP_003563369.1| PREDICTED: probable small nuclear ribonucleo...   151   3e-34
ref|XP_003570509.1| PREDICTED: probable small nuclear ribonucleo...   150   5e-34
ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleo...   150   6e-34
ref|XP_004507856.1| PREDICTED: probable small nuclear ribonucleo...   149   8e-34
ref|NP_001150516.1| small nuclear ribonucleoprotein F [Zea mays]...   149   8e-34
gb|ACG39075.1| small nuclear ribonucleoprotein F [Zea mays]           149   1e-33
ref|XP_003610112.1| Small nuclear ribonucleoprotein F [Medicago ...   149   1e-33
gb|ABA95170.1| small nuclear ribonucleoprotein F, putative, expr...   148   2e-33
gb|EEC72605.1| hypothetical protein OsI_06076 [Oryza sativa Indi...   148   2e-33
gb|ABK22541.1| unknown [Picea sitchensis]                             148   2e-33
ref|XP_002457240.1| hypothetical protein SORBIDRAFT_03g003900 [S...   147   4e-33
ref|XP_002453392.1| hypothetical protein SORBIDRAFT_04g005200 [S...   146   9e-33

>ref|NP_001068396.1| Os11g0657300 [Oryza sativa Japonica Group]
           gi|77552372|gb|ABA95169.1| small nuclear
           ribonucleoprotein F, putative, expressed [Oryza sativa
           Japonica Group] gi|113645618|dbj|BAF28759.1|
           Os11g0657300 [Oryza sativa Japonica Group]
           gi|215693012|dbj|BAG88432.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218186140|gb|EEC68567.1| hypothetical protein
           OsI_36896 [Oryza sativa Indica Group]
           gi|222616369|gb|EEE52501.1| hypothetical protein
           OsJ_34703 [Oryza sativa Japonica Group]
          Length = 86

 Score =  152 bits (383), Expect = 2e-34
 Identities = 72/76 (94%), Positives = 75/76 (98%)
 Frame = +3

Query: 174 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFSGSL 353
           MATVPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN EEYI+GQFSG+L
Sbjct: 1   MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL 60

Query: 354 GEILIRCNNVLYLRGV 401
           GEILIRCNNVLYLRGV
Sbjct: 61  GEILIRCNNVLYLRGV 76


>ref|NP_001046068.1| Os02g0177500 [Oryza sativa Japonica Group]
           gi|573918646|ref|XP_006646960.1| PREDICTED: probable
           small nuclear ribonucleoprotein F-like [Oryza
           brachyantha] gi|50252055|dbj|BAD27986.1| putative small
           nuclear ribonucleoprotein polypeptide F [Oryza sativa
           Japonica Group] gi|113535599|dbj|BAF07982.1|
           Os02g0177500 [Oryza sativa Japonica Group]
          Length = 86

 Score =  152 bits (383), Expect = 2e-34
 Identities = 72/76 (94%), Positives = 75/76 (98%)
 Frame = +3

Query: 174 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFSGSL 353
           MATVPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN EEYI+GQFSG+L
Sbjct: 1   MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL 60

Query: 354 GEILIRCNNVLYLRGV 401
           GEILIRCNNVLYLRGV
Sbjct: 61  GEILIRCNNVLYLRGV 76


>gb|AFK45150.1| unknown [Lotus japonicus]
          Length = 88

 Score =  151 bits (382), Expect = 2e-34
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +3

Query: 174 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFSGSL 353
           MAT+PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN EEYIEGQF+G+L
Sbjct: 1   MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 60

Query: 354 GEILIRCNNVLYLRGV 401
           GEILIRCNNVLYLRGV
Sbjct: 61  GEILIRCNNVLYLRGV 76


>ref|XP_003549441.1| PREDICTED: probable small nuclear ribonucleoprotein F [Glycine max]
           gi|561028116|gb|ESW26756.1| hypothetical protein
           PHAVU_003G145500g [Phaseolus vulgaris]
          Length = 88

 Score =  151 bits (382), Expect = 2e-34
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +3

Query: 174 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFSGSL 353
           MAT+PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN EEYIEGQF+G+L
Sbjct: 1   MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 60

Query: 354 GEILIRCNNVLYLRGV 401
           GEILIRCNNVLYLRGV
Sbjct: 61  GEILIRCNNVLYLRGV 76


>ref|XP_003555743.1| PREDICTED: probable small nuclear ribonucleoprotein F [Glycine max]
           gi|255628071|gb|ACU14380.1| unknown [Glycine max]
          Length = 88

 Score =  151 bits (382), Expect = 2e-34
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +3

Query: 174 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFSGSL 353
           MAT+PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN EEYIEGQF+G+L
Sbjct: 1   MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 60

Query: 354 GEILIRCNNVLYLRGV 401
           GEILIRCNNVLYLRGV
Sbjct: 61  GEILIRCNNVLYLRGV 76


>gb|ACU13643.1| unknown [Glycine max]
          Length = 88

 Score =  151 bits (382), Expect = 2e-34
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +3

Query: 174 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFSGSL 353
           MAT+PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN EEYIEGQF+G+L
Sbjct: 1   MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 60

Query: 354 GEILIRCNNVLYLRGV 401
           GEILIRCNNVLYLRGV
Sbjct: 61  GEILIRCNNVLYLRGV 76


>ref|XP_006848141.1| hypothetical protein AMTR_s00029p00226370 [Amborella trichopoda]
           gi|548851446|gb|ERN09722.1| hypothetical protein
           AMTR_s00029p00226370 [Amborella trichopoda]
          Length = 86

 Score =  151 bits (381), Expect = 3e-34
 Identities = 72/76 (94%), Positives = 74/76 (97%)
 Frame = +3

Query: 174 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFSGSL 353
           MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLAN EEYI+GQ SG+L
Sbjct: 1   MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQLSGNL 60

Query: 354 GEILIRCNNVLYLRGV 401
           GEILIRCNNVLYLRGV
Sbjct: 61  GEILIRCNNVLYLRGV 76


>ref|XP_004951718.1| PREDICTED: probable small nuclear ribonucleoprotein F-like [Setaria
           italica] gi|514709230|ref|XP_004951733.1| PREDICTED:
           probable small nuclear ribonucleoprotein F-like [Setaria
           italica]
          Length = 86

 Score =  151 bits (381), Expect = 3e-34
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +3

Query: 174 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFSGSL 353
           MATVPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN EEYI+GQFSG+L
Sbjct: 1   MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL 60

Query: 354 GEILIRCNNVLYLRGV 401
           GEILIRCNNV+YLRGV
Sbjct: 61  GEILIRCNNVMYLRGV 76


>ref|XP_003563369.1| PREDICTED: probable small nuclear ribonucleoprotein F-like
           [Brachypodium distachyon]
          Length = 86

 Score =  151 bits (381), Expect = 3e-34
 Identities = 71/76 (93%), Positives = 75/76 (98%)
 Frame = +3

Query: 174 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFSGSL 353
           MATVPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN EEYI+GQFSG+L
Sbjct: 1   MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL 60

Query: 354 GEILIRCNNVLYLRGV 401
           GEILIRCNNV+YLRGV
Sbjct: 61  GEILIRCNNVMYLRGV 76


>ref|XP_003570509.1| PREDICTED: probable small nuclear ribonucleoprotein F-like
           [Brachypodium distachyon]
          Length = 86

 Score =  150 bits (379), Expect = 5e-34
 Identities = 70/76 (92%), Positives = 75/76 (98%)
 Frame = +3

Query: 174 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFSGSL 353
           MATVPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN EEYI+GQFSG+L
Sbjct: 1   MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL 60

Query: 354 GEILIRCNNVLYLRGV 401
           GEILIRCNNV+Y+RGV
Sbjct: 61  GEILIRCNNVMYMRGV 76


>ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleoprotein F [Vitis
           vinifera] gi|296083390|emb|CBI23345.3| unnamed protein
           product [Vitis vinifera]
          Length = 88

 Score =  150 bits (378), Expect = 6e-34
 Identities = 70/76 (92%), Positives = 76/76 (100%)
 Frame = +3

Query: 174 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFSGSL 353
           MATVP+NPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN+EEYI+GQF+G+L
Sbjct: 1   MATVPLNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANSEEYIDGQFTGNL 60

Query: 354 GEILIRCNNVLYLRGV 401
           GEILIRCNNVLYLRGV
Sbjct: 61  GEILIRCNNVLYLRGV 76


>ref|XP_004507856.1| PREDICTED: probable small nuclear ribonucleoprotein F-like [Cicer
           arietinum]
          Length = 88

 Score =  149 bits (377), Expect = 8e-34
 Identities = 70/76 (92%), Positives = 74/76 (97%)
 Frame = +3

Query: 174 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFSGSL 353
           MAT+PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN EEYIEG F+G+L
Sbjct: 1   MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGSFTGNL 60

Query: 354 GEILIRCNNVLYLRGV 401
           GEILIRCNNVLYLRGV
Sbjct: 61  GEILIRCNNVLYLRGV 76


>ref|NP_001150516.1| small nuclear ribonucleoprotein F [Zea mays]
           gi|194696080|gb|ACF82124.1| unknown [Zea mays]
           gi|195609436|gb|ACG26548.1| small nuclear
           ribonucleoprotein F [Zea mays]
           gi|195622854|gb|ACG33257.1| small nuclear
           ribonucleoprotein F [Zea mays]
           gi|195639814|gb|ACG39375.1| small nuclear
           ribonucleoprotein F [Zea mays]
           gi|413926377|gb|AFW66309.1| small nuclear
           ribonucleoprotein F [Zea mays]
           gi|413935832|gb|AFW70383.1| small nuclear
           ribonucleoprotein F [Zea mays]
           gi|413935833|gb|AFW70384.1| small nuclear
           ribonucleoprotein F [Zea mays]
          Length = 86

 Score =  149 bits (377), Expect = 8e-34
 Identities = 70/76 (92%), Positives = 74/76 (97%)
 Frame = +3

Query: 174 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFSGSL 353
           MATVPVNPKPFLNNLTGKPV+VKLKWGMEYKGYL SVDSYMNLQLAN EEYI+GQFSG+L
Sbjct: 1   MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLASVDSYMNLQLANTEEYIDGQFSGNL 60

Query: 354 GEILIRCNNVLYLRGV 401
           GEILIRCNNV+YLRGV
Sbjct: 61  GEILIRCNNVMYLRGV 76


>gb|ACG39075.1| small nuclear ribonucleoprotein F [Zea mays]
          Length = 86

 Score =  149 bits (376), Expect = 1e-33
 Identities = 69/76 (90%), Positives = 74/76 (97%)
 Frame = +3

Query: 174 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFSGSL 353
           MATVPVNPKPFLNNLTGKP++VKLKWGMEYKGYL SVDSYMNLQLAN EEYI+GQFSG+L
Sbjct: 1   MATVPVNPKPFLNNLTGKPIIVKLKWGMEYKGYLASVDSYMNLQLANTEEYIDGQFSGNL 60

Query: 354 GEILIRCNNVLYLRGV 401
           GEILIRCNNV+YLRGV
Sbjct: 61  GEILIRCNNVMYLRGV 76


>ref|XP_003610112.1| Small nuclear ribonucleoprotein F [Medicago truncatula]
           gi|355511167|gb|AES92309.1| Small nuclear
           ribonucleoprotein F [Medicago truncatula]
           gi|388505566|gb|AFK40849.1| unknown [Medicago
           truncatula]
          Length = 88

 Score =  149 bits (375), Expect = 1e-33
 Identities = 69/76 (90%), Positives = 74/76 (97%)
 Frame = +3

Query: 174 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFSGSL 353
           MAT+PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN EEYIEG F+G+L
Sbjct: 1   MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGNFTGNL 60

Query: 354 GEILIRCNNVLYLRGV 401
           GEILIRCNNVLY+RGV
Sbjct: 61  GEILIRCNNVLYMRGV 76


>gb|ABA95170.1| small nuclear ribonucleoprotein F, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 85

 Score =  148 bits (374), Expect = 2e-33
 Identities = 70/74 (94%), Positives = 73/74 (98%)
 Frame = +3

Query: 180 TVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFSGSLGE 359
           TVPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN EEYI+GQFSG+LGE
Sbjct: 2   TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLGE 61

Query: 360 ILIRCNNVLYLRGV 401
           ILIRCNNVLYLRGV
Sbjct: 62  ILIRCNNVLYLRGV 75


>gb|EEC72605.1| hypothetical protein OsI_06076 [Oryza sativa Indica Group]
           gi|222622299|gb|EEE56431.1| hypothetical protein
           OsJ_05599 [Oryza sativa Japonica Group]
          Length = 146

 Score =  148 bits (374), Expect = 2e-33
 Identities = 70/74 (94%), Positives = 73/74 (98%)
 Frame = +3

Query: 180 TVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFSGSLGE 359
           TVPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN EEYI+GQFSG+LGE
Sbjct: 63  TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLGE 122

Query: 360 ILIRCNNVLYLRGV 401
           ILIRCNNVLYLRGV
Sbjct: 123 ILIRCNNVLYLRGV 136


>gb|ABK22541.1| unknown [Picea sitchensis]
          Length = 84

 Score =  148 bits (374), Expect = 2e-33
 Identities = 69/76 (90%), Positives = 75/76 (98%)
 Frame = +3

Query: 174 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFSGSL 353
           MATVPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLA+ EEYI+GQF+G+L
Sbjct: 1   MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 60

Query: 354 GEILIRCNNVLYLRGV 401
           GE+LIRCNNVLYLRGV
Sbjct: 61  GEVLIRCNNVLYLRGV 76


>ref|XP_002457240.1| hypothetical protein SORBIDRAFT_03g003900 [Sorghum bicolor]
           gi|241929215|gb|EES02360.1| hypothetical protein
           SORBIDRAFT_03g003900 [Sorghum bicolor]
          Length = 86

 Score =  147 bits (371), Expect = 4e-33
 Identities = 70/76 (92%), Positives = 73/76 (96%)
 Frame = +3

Query: 174 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFSGSL 353
           MATVPVNPKPFLNNLTGK V+VKLKWGMEYKGYL SVDSYMNLQLAN EEYI+GQFSG+L
Sbjct: 1   MATVPVNPKPFLNNLTGKTVIVKLKWGMEYKGYLTSVDSYMNLQLANTEEYIDGQFSGNL 60

Query: 354 GEILIRCNNVLYLRGV 401
           GEILIRCNNVLYLRGV
Sbjct: 61  GEILIRCNNVLYLRGV 76


>ref|XP_002453392.1| hypothetical protein SORBIDRAFT_04g005200 [Sorghum bicolor]
           gi|241933223|gb|EES06368.1| hypothetical protein
           SORBIDRAFT_04g005200 [Sorghum bicolor]
          Length = 86

 Score =  146 bits (368), Expect = 9e-33
 Identities = 70/76 (92%), Positives = 73/76 (96%)
 Frame = +3

Query: 174 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIEGQFSGSL 353
           MATVPVNPKPFLNNLTGK V+VKLKWGMEYKGYL SVDSYMNLQLAN EEYI+GQFSG+L
Sbjct: 1   MATVPVNPKPFLNNLTGKFVIVKLKWGMEYKGYLASVDSYMNLQLANTEEYIDGQFSGNL 60

Query: 354 GEILIRCNNVLYLRGV 401
           GEILIRCNNVLYLRGV
Sbjct: 61  GEILIRCNNVLYLRGV 76


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