BLASTX nr result

ID: Phellodendron21_contig00047025 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00047025
         (324 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_005646688.1 family A G protein-coupled receptor-like protein ...    71   2e-12
AFI58111.1 type 1 rhodopsin, partial [Chlorella vulgaris]              71   3e-12
AHH02116.1 protein 118 [synthetic construct]                           60   3e-08
GAQ79355.1 Bacteriorhodopsin-like protein [Klebsormidium flaccidum]    59   3e-08

>XP_005646688.1 family A G protein-coupled receptor-like protein [Coccomyxa
           subellipsoidea C-169] AEY68816.1 rhodopsin-like protein
           CvRh, partial [Chlorella vulgaris] EIE22144.1 family A G
           protein-coupled receptor-like protein [Coccomyxa
           subellipsoidea C-169]
          Length = 304

 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 35/82 (42%), Positives = 53/82 (64%)
 Frame = -2

Query: 248 GRIILWITFGLMAGSAIGFTILGAMKPMNMRSHAFVSTGIVSIXXXXXXXXATNQGYADI 69
           G ++ W+TFGLMA SA+ F ++   +P+N RSH +++  IV+I        A + G A +
Sbjct: 10  GLVMYWVTFGLMAFSALAFAVMTFTRPLNKRSHGYITLAIVTIAAIAYYAMAASGGKALV 69

Query: 68  RVSPNSNVTRSIFYARYIDWFF 3
             +P+ N+ R I+YARYIDWFF
Sbjct: 70  S-NPDGNL-RDIYYARYIDWFF 89


>AFI58111.1 type 1 rhodopsin, partial [Chlorella vulgaris]
          Length = 314

 Score = 70.9 bits (172), Expect = 3e-12
 Identities = 35/82 (42%), Positives = 53/82 (64%)
 Frame = -2

Query: 248 GRIILWITFGLMAGSAIGFTILGAMKPMNMRSHAFVSTGIVSIXXXXXXXXATNQGYADI 69
           G ++ W+TFGLMA SA+ F ++   +P+N RSH +++  IV+I        A + G A +
Sbjct: 10  GLVMYWVTFGLMAFSALAFAVMTFTRPLNKRSHGYITLAIVTIAAIAYYAMAASGGKALV 69

Query: 68  RVSPNSNVTRSIFYARYIDWFF 3
             +P+ N+ R I+YARYIDWFF
Sbjct: 70  S-NPDGNL-RDIYYARYIDWFF 89


>AHH02116.1 protein 118 [synthetic construct]
          Length = 286

 Score = 59.7 bits (143), Expect = 3e-08
 Identities = 29/84 (34%), Positives = 45/84 (53%)
 Frame = -2

Query: 260 LDGHGRIILWITFGLMAGSAIGFTILGAMKPMNMRSHAFVSTGIVSIXXXXXXXXATNQG 81
           +D  G  + WI FG+ + SA+   +L   K   +RSH + +  I+          AT  G
Sbjct: 25  IDHGGEAMYWIVFGVFSLSALAIAVLTYRKAPALRSHGYCTLAILCTASIAYFSMATQGG 84

Query: 80  YADIRVSPNSNVTRSIFYARYIDW 9
           YA I+V   +N  R+I++ARY+DW
Sbjct: 85  YAFIKVYDETNTARAIYWARYVDW 108


>GAQ79355.1 Bacteriorhodopsin-like protein [Klebsormidium flaccidum]
          Length = 272

 Score = 59.3 bits (142), Expect = 3e-08
 Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
 Frame = -2

Query: 257 DGHGRIILWITFGLMAGSAIGFTILGAMKPMNMRSHAFVSTGIVSIXXXXXXXXATNQGY 78
           D  G  + WIT+G+MA +A+ F  +   +P+  RSH + S  IV+I        A+  G 
Sbjct: 7   DAAGWTLYWITYGIMAVTALIFFAMSLRRPIQQRSHHYTSFLIVAIASLAYYAMASQGGN 66

Query: 77  ADIRVSPN-SNVTRSIFYARYIDWFF 3
             IRV    ++  R IF+ARY+DWFF
Sbjct: 67  TRIRVYQGPADSYRQIFWARYVDWFF 92


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