BLASTX nr result
ID: Phellodendron21_contig00046786
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Phellodendron21_contig00046786
(310 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAD39797.2 OSJNBa0071G03.10 [Oryza sativa Japonica Group] 56 5e-07
BAA22288.1 polyprotein [Oryza australiensis] 55 1e-06
AAP44605.1 putative polyprotein [Oryza sativa Japonica Group] 55 1e-06
ABF97047.1 retrotransposon protein, putative, Ty1-copia subclass... 55 1e-06
XP_010556061.1 PREDICTED: uncharacterized protein LOC104825432 [... 54 1e-06
ABA99022.2 retrotransposon protein, putative, Ty1-copia subclass... 55 2e-06
CAE04999.2 OSJNBb0093G06.7 [Oryza sativa Japonica Group] 55 2e-06
KYP42262.1 Retrovirus-related Pol polyprotein from transposon TN... 53 6e-06
AAV85747.1 Integrase core domain, putative [Oryza sativa Japonic... 53 6e-06
CAE03687.2 OSJNBb0026E15.5 [Oryza sativa Japonica Group] 53 8e-06
AAX94813.1 retrotransposon protein, putative, Ty1-copia sub-clas... 53 9e-06
ABA98367.2 retrotransposon protein, putative, Ty1-copia subclass... 53 9e-06
>CAD39797.2 OSJNBa0071G03.10 [Oryza sativa Japonica Group]
Length = 948
Score = 56.2 bits (134), Expect = 5e-07
Identities = 28/50 (56%), Positives = 32/50 (64%), Gaps = 8/50 (16%)
Frame = -1
Query: 127 KAHFTGVGHWA--------TDLCGPISHTAHSGYSYFVTFTDHLSRYGYV 2
KA FTG A TD+CGP+S TA SG+ YF+TFTD SRYGYV
Sbjct: 477 KAPFTGQSERASELLALVHTDVCGPMSSTARSGFGYFITFTDDFSRYGYV 526
>BAA22288.1 polyprotein [Oryza australiensis]
Length = 1317
Score = 55.5 bits (132), Expect = 1e-06
Identities = 27/50 (54%), Positives = 31/50 (62%), Gaps = 8/50 (16%)
Frame = -1
Query: 127 KAHFTGVGHWA--------TDLCGPISHTAHSGYSYFVTFTDHLSRYGYV 2
KA FTG A TD+CGP+S TA GY YF+TFTD SRYGY+
Sbjct: 482 KAPFTGHSERASDLLALVHTDVCGPMSSTARGGYQYFITFTDDFSRYGYI 531
>AAP44605.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1161
Score = 55.1 bits (131), Expect = 1e-06
Identities = 27/50 (54%), Positives = 31/50 (62%), Gaps = 8/50 (16%)
Frame = -1
Query: 127 KAHFTGVGHWA--------TDLCGPISHTAHSGYSYFVTFTDHLSRYGYV 2
KA FTG A TD+CGP+S TA G+ YF+TFTD SRYGYV
Sbjct: 360 KAPFTGQSERASELLGLVHTDVCGPMSSTARGGFGYFITFTDEFSRYGYV 409
>ABF97047.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1248
Score = 55.1 bits (131), Expect = 1e-06
Identities = 27/50 (54%), Positives = 31/50 (62%), Gaps = 8/50 (16%)
Frame = -1
Query: 127 KAHFTGVGHWA--------TDLCGPISHTAHSGYSYFVTFTDHLSRYGYV 2
KA FTG A TD+CGP+S TA G+ YF+TFTD SRYGYV
Sbjct: 447 KAPFTGQSERASELLGLVHTDVCGPMSSTARGGFGYFITFTDEFSRYGYV 496
>XP_010556061.1 PREDICTED: uncharacterized protein LOC104825432 [Tarenaya
hassleriana]
Length = 165
Score = 53.5 bits (127), Expect = 1e-06
Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 8/50 (16%)
Frame = -1
Query: 127 KAHFTGVGHWA--------TDLCGPISHTAHSGYSYFVTFTDHLSRYGYV 2
K+ FTG G A +D+CGP++ A GYSYFVTFTD SRYGYV
Sbjct: 3 KSPFTGKGQRADELLSLIHSDVCGPMNTPARGGYSYFVTFTDDYSRYGYV 52
>ABA99022.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 829
Score = 54.7 bits (130), Expect = 2e-06
Identities = 27/50 (54%), Positives = 31/50 (62%), Gaps = 8/50 (16%)
Frame = -1
Query: 127 KAHFTGVGHWA--------TDLCGPISHTAHSGYSYFVTFTDHLSRYGYV 2
KA FTG A TD+CGP+S TA G+ YF+TFTD SRYGYV
Sbjct: 426 KAPFTGQSERASELLGLVHTDVCGPMSSTARGGFGYFITFTDDFSRYGYV 475
>CAE04999.2 OSJNBb0093G06.7 [Oryza sativa Japonica Group]
Length = 923
Score = 54.7 bits (130), Expect = 2e-06
Identities = 27/50 (54%), Positives = 31/50 (62%), Gaps = 8/50 (16%)
Frame = -1
Query: 127 KAHFTGVGHWA--------TDLCGPISHTAHSGYSYFVTFTDHLSRYGYV 2
KA FTG A TD+CGP+S TA G+ YF+TFTD SRYGYV
Sbjct: 441 KAPFTGQSERASELLGLVHTDICGPMSSTAKGGFGYFITFTDDFSRYGYV 490
>KYP42262.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 656
Score = 53.1 bits (126), Expect = 6e-06
Identities = 26/50 (52%), Positives = 32/50 (64%), Gaps = 8/50 (16%)
Frame = -1
Query: 127 KAHFTGVGHWA--------TDLCGPISHTAHSGYSYFVTFTDHLSRYGYV 2
K+ FTG G A TD+CGP+ A GYSYF+TFTD +SRYG+V
Sbjct: 408 KSPFTGKGERASELLGLIHTDVCGPMKIQAKGGYSYFITFTDDMSRYGFV 457
>AAV85747.1 Integrase core domain, putative [Oryza sativa Japonica Group]
AAX92956.1 retrotransposon protein, putative, Ty1-copia
sub-class [Oryza sativa Japonica Group] ABA92827.2
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1184
Score = 53.1 bits (126), Expect = 6e-06
Identities = 27/50 (54%), Positives = 30/50 (60%), Gaps = 8/50 (16%)
Frame = -1
Query: 127 KAHFTGVGHWA--------TDLCGPISHTAHSGYSYFVTFTDHLSRYGYV 2
KA FTG A TD+CGP+S TA G+ YF TFTD SRYGYV
Sbjct: 458 KAPFTGQSERASELLALVHTDVCGPMSSTARGGFGYFFTFTDDFSRYGYV 507
>CAE03687.2 OSJNBb0026E15.5 [Oryza sativa Japonica Group]
Length = 448
Score = 52.8 bits (125), Expect = 8e-06
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = -1
Query: 94 TDLCGPISHTAHSGYSYFVTFTDHLSRYGYV 2
TD+CGP+S TA G+ YF+TFTD SRYGYV
Sbjct: 80 TDVCGPMSSTARGGFRYFITFTDDFSRYGYV 110
>AAX94813.1 retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] ABA93176.1 retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 938
Score = 52.8 bits (125), Expect = 9e-06
Identities = 26/50 (52%), Positives = 31/50 (62%), Gaps = 8/50 (16%)
Frame = -1
Query: 127 KAHFTGVGHWA--------TDLCGPISHTAHSGYSYFVTFTDHLSRYGYV 2
KA FTG A TD+CGP+S TA G+ YF+TFT+ SRYGYV
Sbjct: 367 KAPFTGQSEKASELLGLVHTDVCGPMSSTARGGFGYFITFTNDFSRYGYV 416
>ABA98367.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1745
Score = 52.8 bits (125), Expect = 9e-06
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = -1
Query: 94 TDLCGPISHTAHSGYSYFVTFTDHLSRYGYV 2
TD+CGP+S TA G+ YF+TFTD SRYGYV
Sbjct: 977 TDVCGPMSSTARCGFGYFITFTDDFSRYGYV 1007