BLASTX nr result

ID: Phellodendron21_contig00046201 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00046201
         (251 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006487157.1 PREDICTED: SWI/SNF complex subunit SWI3D [Citrus ...    48   2e-09
XP_006423245.1 hypothetical protein CICLE_v10027804mg [Citrus cl...    48   2e-09
KDO49105.1 hypothetical protein CISIN_1g001648mg [Citrus sinensi...    43   8e-09

>XP_006487157.1 PREDICTED: SWI/SNF complex subunit SWI3D [Citrus sinensis]
          Length = 1038

 Score = 47.8 bits (112), Expect(3) = 2e-09
 Identities = 29/45 (64%), Positives = 30/45 (66%)
 Frame = +3

Query: 75  KDINLWSDSLNLEKKYEPDQPATSNSVEEQSQPFKATKYVDMVSD 209
           KD +L SDSL   K  EPDQP  SNSV E S P K TK VDMVSD
Sbjct: 754 KDNSLLSDSLPSGKN-EPDQPFISNSVAEPSPPSKLTKDVDMVSD 797



 Score = 38.1 bits (87), Expect(3) = 2e-09
 Identities = 18/26 (69%), Positives = 20/26 (76%)
 Frame = +1

Query: 1   KVPQSSQIELREGSSGEPTPPIDVTR 78
           KV QSSQ E  EGSSGEP PP+DV +
Sbjct: 729 KVLQSSQKESGEGSSGEPAPPVDVEK 754



 Score = 22.7 bits (47), Expect(3) = 2e-09
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +2

Query: 218 PLEKNEPEKQI 250
           P E NEPEKQI
Sbjct: 800 PSENNEPEKQI 810


>XP_006423245.1 hypothetical protein CICLE_v10027804mg [Citrus clementina]
           ESR36485.1 hypothetical protein CICLE_v10027804mg
           [Citrus clementina]
          Length = 851

 Score = 47.8 bits (112), Expect(3) = 2e-09
 Identities = 29/45 (64%), Positives = 30/45 (66%)
 Frame = +3

Query: 75  KDINLWSDSLNLEKKYEPDQPATSNSVEEQSQPFKATKYVDMVSD 209
           KD +L SDSL   K  EPDQP  SNSV E S P K TK VDMVSD
Sbjct: 567 KDNSLLSDSLPSGKN-EPDQPFISNSVAEPSPPSKLTKDVDMVSD 610



 Score = 38.1 bits (87), Expect(3) = 2e-09
 Identities = 18/26 (69%), Positives = 20/26 (76%)
 Frame = +1

Query: 1   KVPQSSQIELREGSSGEPTPPIDVTR 78
           KV QSSQ E  EGSSGEP PP+DV +
Sbjct: 542 KVLQSSQKESGEGSSGEPAPPVDVEK 567



 Score = 22.7 bits (47), Expect(3) = 2e-09
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +2

Query: 218 PLEKNEPEKQI 250
           P E NEPEKQI
Sbjct: 613 PSENNEPEKQI 623


>KDO49105.1 hypothetical protein CISIN_1g001648mg [Citrus sinensis] KDO49106.1
           hypothetical protein CISIN_1g001648mg [Citrus sinensis]
          Length = 1038

 Score = 43.1 bits (100), Expect(3) = 8e-09
 Identities = 27/45 (60%), Positives = 28/45 (62%)
 Frame = +3

Query: 75  KDINLWSDSLNLEKKYEPDQPATSNSVEEQSQPFKATKYVDMVSD 209
           KD +L SDSL   K  EPDQ   SNSV E S P K T  VDMVSD
Sbjct: 754 KDNSLLSDSLPSGKN-EPDQRVLSNSVAEPSPPSKLTNDVDMVSD 797



 Score = 38.1 bits (87), Expect(3) = 8e-09
 Identities = 18/26 (69%), Positives = 20/26 (76%)
 Frame = +1

Query: 1   KVPQSSQIELREGSSGEPTPPIDVTR 78
           KV QSSQ E  EGSSGEP PP+DV +
Sbjct: 729 KVLQSSQKESGEGSSGEPAPPVDVEK 754



 Score = 25.0 bits (53), Expect(3) = 8e-09
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = +2

Query: 218 PLEKNEPEKQI 250
           PLE NEPEKQI
Sbjct: 800 PLENNEPEKQI 810


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