BLASTX nr result

ID: Phellodendron21_contig00045833 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00045833
         (272 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_015380661.1 PREDICTED: glycine-rich cell wall structural prot...    83   1e-17
XP_015380660.1 PREDICTED: glycine-rich cell wall structural prot...    84   2e-17
XP_019076765.1 PREDICTED: glycine-rich cell wall structural prot...    52   5e-06
XP_010652256.1 PREDICTED: glycine-rich cell wall structural prot...    52   6e-06
XP_010652254.1 PREDICTED: glycine-rich cell wall structural prot...    52   6e-06

>XP_015380661.1 PREDICTED: glycine-rich cell wall structural protein-like [Citrus
           sinensis]
          Length = 242

 Score = 83.2 bits (204), Expect = 1e-17
 Identities = 40/64 (62%), Positives = 50/64 (78%), Gaps = 2/64 (3%)
 Frame = -1

Query: 188 MGTILRNVGVYAMALFMLMAVVGIAKGRRIEKESMAIHKDHGGAIGRC--NTSSIGDNKW 15
           M   LRNVG+YA+ LFML+AVVGI +GR+IEKESM +HKD+G AI RC  N + +GD+K 
Sbjct: 1   MAAFLRNVGMYAITLFMLIAVVGITEGRQIEKESMTMHKDNGDAIARCINNGAEVGDSKL 60

Query: 14  GCDR 3
           GC R
Sbjct: 61  GCGR 64


>XP_015380660.1 PREDICTED: glycine-rich cell wall structural protein-like [Citrus
           sinensis]
          Length = 308

 Score = 84.0 bits (206), Expect = 2e-17
 Identities = 43/68 (63%), Positives = 50/68 (73%), Gaps = 9/68 (13%)
 Frame = -1

Query: 188 MGTILRNVGVYAMALFMLMAVVGIAKGRRIEKESMAIHKDHGGAIGRCNT---------S 36
           M T LRNVG+YA+ LFML+AVVGI +GRRIEKESM +HKDHGGAI  C T         S
Sbjct: 1   MATFLRNVGMYAITLFMLIAVVGITEGRRIEKESMTMHKDHGGAIAPCTTDGAGVGVAAS 60

Query: 35  SIGDNKWG 12
           +IGD+K G
Sbjct: 61  AIGDSKCG 68


>XP_019076765.1 PREDICTED: glycine-rich cell wall structural protein isoform X3
           [Vitis vinifera]
          Length = 233

 Score = 52.4 bits (124), Expect = 5e-06
 Identities = 25/46 (54%), Positives = 33/46 (71%)
 Frame = -1

Query: 188 MGTILRNVGVYAMALFMLMAVVGIAKGRRIEKESMAIHKDHGGAIG 51
           MG  L+NVGV  MA+ M+M VVGIA+GRRIEK++   +   GG +G
Sbjct: 1   MGKFLKNVGVSVMAVLMVMVVVGIAEGRRIEKDTFGENGGGGGGLG 46


>XP_010652256.1 PREDICTED: glycine-rich cell wall structural protein isoform X2
           [Vitis vinifera]
          Length = 259

 Score = 52.4 bits (124), Expect = 6e-06
 Identities = 25/46 (54%), Positives = 33/46 (71%)
 Frame = -1

Query: 188 MGTILRNVGVYAMALFMLMAVVGIAKGRRIEKESMAIHKDHGGAIG 51
           MG  L+NVGV  MA+ M+M VVGIA+GRRIEK++   +   GG +G
Sbjct: 1   MGKFLKNVGVSVMAVLMVMVVVGIAEGRRIEKDTFGENGGGGGGLG 46


>XP_010652254.1 PREDICTED: glycine-rich cell wall structural protein isoform X1
           [Vitis vinifera]
          Length = 275

 Score = 52.4 bits (124), Expect = 6e-06
 Identities = 25/46 (54%), Positives = 33/46 (71%)
 Frame = -1

Query: 188 MGTILRNVGVYAMALFMLMAVVGIAKGRRIEKESMAIHKDHGGAIG 51
           MG  L+NVGV  MA+ M+M VVGIA+GRRIEK++   +   GG +G
Sbjct: 1   MGKFLKNVGVSVMAVLMVMVVVGIAEGRRIEKDTFGENGGGGGGLG 46


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