BLASTX nr result

ID: Phellodendron21_contig00045463 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00045463
         (442 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YP_009337659.1 hypothetical protein [Hubei virga-like virus 21] ...    59   3e-07
NP_620754.1 putative polymerase p2 [Tulare apple mosaic virus] A...    54   9e-06

>YP_009337659.1 hypothetical protein [Hubei virga-like virus 21] APG77651.1
            hypothetical protein [Hubei virga-like virus 21]
          Length = 2444

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 41/143 (28%), Positives = 72/143 (50%)
 Frame = -3

Query: 434  EADYDSYVRSQGAAASKLHWTKCAKFGVMPDLVDFLVTQNQVRSISDLEAGVKMFLDNQR 255
            E D   + +SQ   A  L       FG+  ++V   ++ +   ++ D + G+K  +  QR
Sbjct: 2198 EFDISKFDKSQNEIALMLDAAIMRMFGINEEIVQLWISGHTATTLVDYKGGLKAEVTYQR 2257

Query: 254  GSGHPDTLDGNNDVNEMVLAQLLESFVDKIEFIIIQGDDVIVAIRGSMIDVSTWEYEVTR 75
             SG P T  GN       LA ++   +++IEF    GDD I+  + + I +S+ +Y +  
Sbjct: 2258 KSGDPFTFLGNTLFLMSCLAVIVP--LEQIEFAAFGGDDQIIVTK-TDIGLSSVQY-LEN 2313

Query: 74   RFNLSVKLSIQEHGYMCSYDIVH 6
             FNL  KL ++++ Y CS  ++H
Sbjct: 2314 VFNLEAKLFVRKYPYFCSKFLLH 2336


>NP_620754.1 putative polymerase p2 [Tulare apple mosaic virus] AAK01482.1
           putative polymerase p2 [Tulare apple mosaic virus]
          Length = 809

 Score = 54.3 bits (129), Expect = 9e-06
 Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 1/143 (0%)
 Frame = -3

Query: 434 EADYDSYVRSQGAAASKLHWTKCAKFGVMPDLVDFLVTQNQVRSISDLEAGVKMFLDNQR 255
           E D+  + +SQG    K+         + P+ V+   T ++   I+D + GV   +D QR
Sbjct: 433 EVDFSKFDKSQGELHHKVQKLIFDLLKLPPEFVEMWFTSHERSHITDRDVGVGFSVDFQR 492

Query: 254 GSGHPDTLDGNNDVNEMVLAQLLESFVDKIEFIIIQGDDVIVAIRGSMIDV-STWEYEVT 78
            +G  +T  GN  V  M LA++ +S   KI F+I  G D   ++ GS+ ++  T E+  T
Sbjct: 493 RTGDANTYLGNTLVTLMCLARVYDSCDPKITFVIASGAD---SLLGSVEELPRTPEHLFT 549

Query: 77  RRFNLSVKLSIQEHGYMCSYDIV 9
             FN   K       ++CS  +V
Sbjct: 550 SLFNFEAKFP-HNQPFICSKFLV 571


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