BLASTX nr result
ID: Phellodendron21_contig00044171
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Phellodendron21_contig00044171
(458 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ACF16408.1 chloroplast ribulose 1,5-bisphosphate carboxylase/oxy... 130 2e-35
WP_051016923.1 ribulose bisphosphate carboxylase small subunit, ... 126 7e-34
XP_005648578.1 chloroplast ribulose 1,5-bisphosphate carboxylase... 122 4e-32
XP_005852247.1 hypothetical protein CHLNCDRAFT_29368 [Chlorella ... 121 4e-32
XP_005851923.1 hypothetical protein CHLNCDRAFT_59545 [Chlorella ... 121 4e-32
BAD42334.1 ribulose-1,5-bisphosphate carboxyase/oxygenase small ... 118 9e-31
BAD42333.1 ribulose-1,5-bisphosphate carboxyase/oxygenase small ... 117 3e-30
ACU32662.1 chloroplast ribulose-1,5-bisphosphate carboxylase/oxy... 112 3e-28
P26985.2 RecName: Full=Ribulose bisphosphate carboxylase small c... 111 3e-28
ADU33221.1 ribulose-1,5-bisphosphate carboxylase/oxygenase small... 111 4e-28
prf||1803224A RuBisCO:SUBUNIT=small:ISOTYPE=1 110 8e-28
AAU93597.1 ribulose-1,5-bisphosphate carboxylase/oxygenase small... 110 2e-27
ACU32661.1 chloroplast ribulose-1,5-bisphosphate carboxylase/oxy... 107 2e-26
AAS48504.1 ribulose-1,5-bisphosphate carboxylase/oxygenase small... 107 3e-26
XP_013900278.1 ribulose-bisphosphate carboxylase small chain [Mo... 106 3e-26
XP_013902239.1 ribulose-bisphosphate carboxylase small chain [Mo... 106 3e-26
P16137.1 RecName: Full=Ribulose bisphosphate carboxylase small c... 106 3e-26
AGH30308.1 chloroplast ribulose-1,5-bisphosphate carboxylase/oxy... 105 5e-26
AAS48503.1 ribulose-1,5-bisphosphate carboxylase/oxygenase small... 106 5e-26
P16138.1 RecName: Full=Ribulose bisphosphate carboxylase small c... 105 9e-26
>ACF16408.1 chloroplast ribulose 1,5-bisphosphate carboxylase/oxygenase small
subunit [Lobosphaera incisa] AID50176.1 chloroplast
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Lobosphaera incisa]
Length = 189
Score = 130 bits (327), Expect = 2e-35
Identities = 63/90 (70%), Positives = 71/90 (78%), Gaps = 1/90 (1%)
Frame = +1
Query: 190 TFAQRTVSNGVKTRQMMVWQPKNNKMFETLSFLPPLSADEIAKQVDYVIQNNWTPCLEFS 369
TFAQ+TVSNG+KTRQMMVWQP NN+ FETLSFLPPL+ D+IAKQVDY+I N W PCLEFS
Sbjct: 35 TFAQKTVSNGIKTRQMMVWQPTNNRYFETLSFLPPLTDDQIAKQVDYMINNGWVPCLEFS 94
Query: 370 EPEFAYVQAVNTNHIR-GTCFANYQDNRYW 456
E AYV + N IR G + YQDNRYW
Sbjct: 95 EANMAYV--ASDNCIRYGNVASGYQDNRYW 122
>WP_051016923.1 ribulose bisphosphate carboxylase small subunit, partial [Nocardia
cyriacigeorgica]
Length = 199
Score = 126 bits (317), Expect = 7e-34
Identities = 56/89 (62%), Positives = 68/89 (76%)
Frame = +1
Query: 190 TFAQRTVSNGVKTRQMMVWQPKNNKMFETLSFLPPLSADEIAKQVDYVIQNNWTPCLEFS 369
TFAQRTVSNG +TRQM+VW+P +NK FET S+LPPL+ D+IAKQVDY+I+ WTPCLEFS
Sbjct: 39 TFAQRTVSNGCRTRQMLVWEPTDNKFFETFSYLPPLTDDQIAKQVDYIIRQGWTPCLEFS 98
Query: 370 EPEFAYVQAVNTNHIRGTCFANYQDNRYW 456
PE AYV+ + G+ Y DNRYW
Sbjct: 99 RPEGAYVKDIANIRYGGSANCGYYDNRYW 127
>XP_005648578.1 chloroplast ribulose 1,5-bisphosphate carboxylase/oxygenase small
subunit [Coccomyxa subellipsoidea C-169] EIE24034.1
chloroplast ribulose 1,5-bisphosphate
carboxylase/oxygenase small subunit [Coccomyxa
subellipsoidea C-169]
Length = 195
Score = 122 bits (305), Expect = 4e-32
Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 1/90 (1%)
Frame = +1
Query: 190 TFAQRTVSNGVKTRQMMVWQPKNNKMFETLSFLPPLSADEIAKQVDYVIQNNWTPCLEFS 369
TFAQRTVSNG +TRQM+VW+P +NK FET S+LPPL+ D+IAKQVDY+I+ WTP LEFS
Sbjct: 39 TFAQRTVSNGCRTRQMLVWEPVDNKFFETFSYLPPLTDDQIAKQVDYIIRQGWTPALEFS 98
Query: 370 EPEFAYVQAV-NTNHIRGTCFANYQDNRYW 456
E AYV+ V N G+ NY DNRYW
Sbjct: 99 NAESAYVKDVANIRFTGGSASCNYYDNRYW 128
>XP_005852247.1 hypothetical protein CHLNCDRAFT_29368 [Chlorella variabilis]
EFN60145.1 hypothetical protein CHLNCDRAFT_29368
[Chlorella variabilis]
Length = 184
Score = 121 bits (304), Expect = 4e-32
Identities = 56/99 (56%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
Frame = +1
Query: 166 SPFKVERNTFAQRTVSNGV--KTRQMMVWQPKNNKMFETLSFLPPLSADEIAKQVDYVIQ 339
+P K +NTFA RTVSNG K M VW P NNKMFET SFLPPL+ EI++QVDY+++
Sbjct: 19 TPLKQAKNTFAARTVSNGSIKKVSAMQVWTPLNNKMFETFSFLPPLTDGEISRQVDYIVR 78
Query: 340 NNWTPCLEFSEPEFAYVQAVNTNHIRGTCFANYQDNRYW 456
N WTPCLEF++ + AYV +T +RG Y DNRYW
Sbjct: 79 NGWTPCLEFADADHAYVDDTSTIRLRGNAVPLYYDNRYW 117
>XP_005851923.1 hypothetical protein CHLNCDRAFT_59545 [Chlorella variabilis]
EFN59821.1 hypothetical protein CHLNCDRAFT_59545
[Chlorella variabilis]
Length = 184
Score = 121 bits (304), Expect = 4e-32
Identities = 56/99 (56%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
Frame = +1
Query: 166 SPFKVERNTFAQRTVSNGV--KTRQMMVWQPKNNKMFETLSFLPPLSADEIAKQVDYVIQ 339
+P K +NTFA RTVSNG K M VW P NNKMFET SFLPPL+ EI++QVDY+++
Sbjct: 19 TPLKQAKNTFAARTVSNGSIKKVSAMQVWTPLNNKMFETFSFLPPLTDGEISRQVDYIVR 78
Query: 340 NNWTPCLEFSEPEFAYVQAVNTNHIRGTCFANYQDNRYW 456
N WTPCLEF++ + AYV +T +RG Y DNRYW
Sbjct: 79 NGWTPCLEFADADHAYVDDTSTIRLRGNAVPLYYDNRYW 117
>BAD42334.1 ribulose-1,5-bisphosphate carboxyase/oxygenase small subunit
[Nannochloris bacillaris]
Length = 182
Score = 118 bits (295), Expect = 9e-31
Identities = 62/104 (59%), Positives = 72/104 (69%), Gaps = 5/104 (4%)
Frame = +1
Query: 160 RVSPF-KVERNTFAQRT--VSNGV--KTRQMMVWQPKNNKMFETLSFLPPLSADEIAKQV 324
RV+P KV + RT VSNG KT M+VW P NNK FET SFLPPLS EI KQV
Sbjct: 13 RVAPITKVNATSTKARTAFVSNGTVKKTTAMLVWTPINNKFFETFSFLPPLSDSEITKQV 72
Query: 325 DYVIQNNWTPCLEFSEPEFAYVQAVNTNHIRGTCFANYQDNRYW 456
DY+++N WTPCLEFS+PE AY+ NT ++GT A YQDNRYW
Sbjct: 73 DYIVRNGWTPCLEFSDPEGAYIGDTNTVRLQGTS-AGYQDNRYW 115
>BAD42333.1 ribulose-1,5-bisphosphate carboxyase/oxygenase small subunit
[Nannochloris bacillaris]
Length = 182
Score = 117 bits (292), Expect = 3e-30
Identities = 61/104 (58%), Positives = 72/104 (69%), Gaps = 5/104 (4%)
Frame = +1
Query: 160 RVSPF-KVERNTFAQRT--VSNGV--KTRQMMVWQPKNNKMFETLSFLPPLSADEIAKQV 324
R++P KV + RT VSNG KT M+VW P NNK FET SFLPPLS EI KQV
Sbjct: 13 RIAPITKVNAASTKARTAFVSNGTVKKTTAMLVWTPINNKFFETFSFLPPLSDSEITKQV 72
Query: 325 DYVIQNNWTPCLEFSEPEFAYVQAVNTNHIRGTCFANYQDNRYW 456
DY+++N WTPCLEFS+PE AY+ NT ++GT A YQDNRYW
Sbjct: 73 DYIVRNGWTPCLEFSDPEGAYIGDTNTVRLQGTS-AGYQDNRYW 115
>ACU32662.1 chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Chlorella pyrenoidosa]
Length = 184
Score = 112 bits (279), Expect = 3e-28
Identities = 57/100 (57%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Frame = +1
Query: 166 SPFKVERNTFAQRTVSNG--VKTRQMMVWQPKNNKMFETLSFLPPLSADEIAKQVDYVIQ 339
S K TF TVSNG KT MMVW P NNK FET S+LPPLS D+IA+QVDY++
Sbjct: 20 SVLKPAGKTFKAVTVSNGNVQKTSAMMVWTPVNNKFFETFSYLPPLSGDQIARQVDYIVL 79
Query: 340 NNWTPCLEFSEPEFAYVQAVNTNHIR-GTCFANYQDNRYW 456
N WTPCLEF++P+ AYV N + +R G YQDNRYW
Sbjct: 80 NGWTPCLEFADPDCAYVS--NDSCVRFGNVSVGYQDNRYW 117
>P26985.2 RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor CAA40538.1 ribulose bisphosphate carboxylase
small subunit [Batophora oerstedii]
Length = 175
Score = 111 bits (278), Expect = 3e-28
Identities = 53/100 (53%), Positives = 68/100 (68%), Gaps = 2/100 (2%)
Frame = +1
Query: 163 VSPFKVERNTFAQRTVSNGV--KTRQMMVWQPKNNKMFETLSFLPPLSADEIAKQVDYVI 336
+ P + R +SNG K+R MMVW+P NNK FET S+LPPL+ D+I KQVDY++
Sbjct: 10 IVPCATTKQIVRPRFLSNGTISKSRAMMVWEPFNNKFFETFSYLPPLTDDQITKQVDYIL 69
Query: 337 QNNWTPCLEFSEPEFAYVQAVNTNHIRGTCFANYQDNRYW 456
+NNWTPCLEF+ + AYV NT + G C + YQDNRYW
Sbjct: 70 RNNWTPCLEFAGSDQAYVTHDNTVRM-GDCASTYQDNRYW 108
>ADU33221.1 ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Dunaliella parva]
Length = 189
Score = 111 bits (278), Expect = 4e-28
Identities = 52/80 (65%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
Frame = +1
Query: 220 VKTRQMMVWQPKNNKMFETLSFLPPLSADEIAKQVDYVIQNNWTPCLEFSEPEFAYVQAV 399
V+ QMMVWQP NNK FET S+LPPL+AD+IAKQVDY++ N W PCLEFSE +AYV
Sbjct: 42 VRANQMMVWQPVNNKQFETFSYLPPLTADQIAKQVDYIVGNGWIPCLEFSEESYAYV--A 99
Query: 400 NTNHIR-GTCFANYQDNRYW 456
NTN +R G NY DNRYW
Sbjct: 100 NTNTVRFGPVSNNYYDNRYW 119
>prf||1803224A RuBisCO:SUBUNIT=small:ISOTYPE=1
Length = 175
Score = 110 bits (275), Expect = 8e-28
Identities = 53/100 (53%), Positives = 67/100 (67%), Gaps = 2/100 (2%)
Frame = +1
Query: 163 VSPFKVERNTFAQRTVSNGV--KTRQMMVWQPKNNKMFETLSFLPPLSADEIAKQVDYVI 336
+ P + R +SNG K+R MMVW P NNK FET S+LPPL+ D+I KQVDY++
Sbjct: 10 IVPCATTKQIVRPRFLSNGTISKSRAMMVWXPFNNKFFETFSYLPPLTDDQITKQVDYIL 69
Query: 337 QNNWTPCLEFSEPEFAYVQAVNTNHIRGTCFANYQDNRYW 456
+NNWTPCLEF+ + AYV NT + G C + YQDNRYW
Sbjct: 70 RNNWTPCLEFAGSDQAYVTHDNTVRM-GDCASTYQDNRYW 108
>AAU93597.1 ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Dunaliella salina]
Length = 190
Score = 110 bits (274), Expect = 2e-27
Identities = 50/87 (57%), Positives = 61/87 (70%)
Frame = +1
Query: 196 AQRTVSNGVKTRQMMVWQPKNNKMFETLSFLPPLSADEIAKQVDYVIQNNWTPCLEFSEP 375
A + + V+T QMMVW+P NNK FET S+LPPL+AD+IA+QVDY++ N W PCLEFSE
Sbjct: 35 APKAQAPAVRTNQMMVWRPVNNKQFETFSYLPPLTADQIARQVDYIVGNGWIPCLEFSEE 94
Query: 376 EFAYVQAVNTNHIRGTCFANYQDNRYW 456
+AYV NT G NY DNRYW
Sbjct: 95 SYAYVANTNTARF-GPVSNNYYDNRYW 120
>ACU32661.1 chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Chlorella pyrenoidosa]
Length = 181
Score = 107 bits (267), Expect = 2e-26
Identities = 59/103 (57%), Positives = 68/103 (66%), Gaps = 5/103 (4%)
Frame = +1
Query: 163 VSPFKVERNTFAQRTVSNGV--KTRQMMVWQPKNNKMFETLSFLPPLSADEIAKQVDYVI 336
V+ K +NT A RTVSNG KT M VW P NNKMFET S+LPPL+ EI++QVDY++
Sbjct: 16 VAGLKQAKNTSAARTVSNGSIQKTTAMQVWTPINNKMFETFSYLPPLTDAEISRQVDYIV 75
Query: 337 QNNWTPCLEFSEPEFAYVQAVNTNHIR---GTCFANYQDNRYW 456
N WTPCLEF+E AY A N N IR TC Y DNRYW
Sbjct: 76 NNGWTPCLEFAESASAY--ASNENCIRMNNTTCL--YYDNRYW 114
>AAS48504.1 ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Dunaliella tertiolecta]
Length = 188
Score = 107 bits (266), Expect = 3e-26
Identities = 48/79 (60%), Positives = 59/79 (74%)
Frame = +1
Query: 220 VKTRQMMVWQPKNNKMFETLSFLPPLSADEIAKQVDYVIQNNWTPCLEFSEPEFAYVQAV 399
V+ QMMVWQP NNK FET S+LPPL+AD+IA+QVDY+++N WTPCLEF+E AYV +
Sbjct: 41 VRANQMMVWQPINNKQFETFSYLPPLTADQIARQVDYIVENGWTPCLEFAEEGQAYVSSD 100
Query: 400 NTNHIRGTCFANYQDNRYW 456
+ G ANY DNRYW
Sbjct: 101 SAVRF-GAVSANYYDNRYW 118
>XP_013900278.1 ribulose-bisphosphate carboxylase small chain [Monoraphidium
neglectum] KIZ01259.1 ribulose-bisphosphate carboxylase
small chain [Monoraphidium neglectum]
Length = 165
Score = 106 bits (264), Expect = 3e-26
Identities = 45/78 (57%), Positives = 55/78 (70%)
Frame = +1
Query: 223 KTRQMMVWQPKNNKMFETLSFLPPLSADEIAKQVDYVIQNNWTPCLEFSEPEFAYVQAVN 402
K +MMVWQP NNK FET S+LPPL+ ++IA+QVDY+I N WTPCLEF+ P+ AY N
Sbjct: 20 KANKMMVWQPVNNKFFETFSYLPPLNDNQIARQVDYIINNGWTPCLEFAAPDSAYTSNTN 79
Query: 403 TNHIRGTCFANYQDNRYW 456
I+ NY DNRYW
Sbjct: 80 VVRIQNGATCNYYDNRYW 97
>XP_013902239.1 ribulose-bisphosphate carboxylase small chain [Monoraphidium
neglectum] KIZ03220.1 ribulose-bisphosphate carboxylase
small chain [Monoraphidium neglectum]
Length = 166
Score = 106 bits (264), Expect = 3e-26
Identities = 45/78 (57%), Positives = 55/78 (70%)
Frame = +1
Query: 223 KTRQMMVWQPKNNKMFETLSFLPPLSADEIAKQVDYVIQNNWTPCLEFSEPEFAYVQAVN 402
K +MMVWQP NNK FET S+LPPL+ ++IA+QVDY+I N WTPCLEF+ P+ AY N
Sbjct: 21 KANKMMVWQPVNNKFFETFSYLPPLNDNQIARQVDYIINNGWTPCLEFAAPDSAYTSNTN 80
Query: 403 TNHIRGTCFANYQDNRYW 456
I+ NY DNRYW
Sbjct: 81 VVRIQNGATCNYYDNRYW 98
>P16137.1 RecName: Full=Ribulose bisphosphate carboxylase small chain 4,
chloroplastic; Short=RuBisCO small subunit 4; Flags:
Precursor CAA36111.1 ribulose bisphosphate carboxylase,
small subunit precursor [Acetabularia acetabulum]
Length = 182
Score = 106 bits (265), Expect = 3e-26
Identities = 55/92 (59%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
Frame = +1
Query: 184 RNTFAQRTVSNGVKTRQMMVWQPKNNKMFETLSFLPPLSADEIAKQVDYVIQNNWTPCLE 363
+ +FA TV+N K R+MMVWQP NNKMFET SFLPPL+ ++I+KQVDY++ N+WTPCLE
Sbjct: 29 KRSFAS-TVAN--KNREMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILANSWTPCLE 85
Query: 364 FSEPEFAYVQAVNTNHIR-GTCFANYQDNRYW 456
F+ + AY A N N IR G + YQDNRYW
Sbjct: 86 FAASDQAY--AGNENCIRMGPVASTYQDNRYW 115
>AGH30308.1 chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Chromochloris zofingiensis] AGH30309.1
chloroplast ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit [Chromochloris
zofingiensis]
Length = 173
Score = 105 bits (263), Expect = 5e-26
Identities = 47/78 (60%), Positives = 55/78 (70%)
Frame = +1
Query: 223 KTRQMMVWQPKNNKMFETLSFLPPLSADEIAKQVDYVIQNNWTPCLEFSEPEFAYVQAVN 402
K +MMVW+P NNK FET S LPPL+ D+IA+QVDY++ N WTPCLEFSEPE AY N
Sbjct: 30 KANKMMVWRPDNNKYFETFSHLPPLTDDQIARQVDYIVNNGWTPCLEFSEPEIAYTAQYN 89
Query: 403 TNHIRGTCFANYQDNRYW 456
T G + Y DNRYW
Sbjct: 90 TIRF-GAVASGYYDNRYW 106
>AAS48503.1 ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Dunaliella tertiolecta]
Length = 189
Score = 106 bits (264), Expect = 5e-26
Identities = 48/79 (60%), Positives = 57/79 (72%)
Frame = +1
Query: 220 VKTRQMMVWQPKNNKMFETLSFLPPLSADEIAKQVDYVIQNNWTPCLEFSEPEFAYVQAV 399
V+ QMMVW P NNK FET S+LPPL+AD+IAKQVDY++ N WTPCLEF+E AYV +
Sbjct: 42 VRANQMMVWNPINNKQFETFSYLPPLTADQIAKQVDYIVNNGWTPCLEFAEQNQAYVSSD 101
Query: 400 NTNHIRGTCFANYQDNRYW 456
+ G ANY DNRYW
Sbjct: 102 SAVRF-GAVSANYYDNRYW 119
>P16138.1 RecName: Full=Ribulose bisphosphate carboxylase small chain 5,
chloroplastic; Short=RuBisCO small subunit 5; Flags:
Precursor CAA36112.1 ribulose bisphosphate carboxylase,
small subunit precursor [Acetabularia acetabulum]
Length = 183
Score = 105 bits (262), Expect = 9e-26
Identities = 53/94 (56%), Positives = 67/94 (71%), Gaps = 1/94 (1%)
Frame = +1
Query: 178 VERNTFAQRTVSNGVKTRQMMVWQPKNNKMFETLSFLPPLSADEIAKQVDYVIQNNWTPC 357
+ + FA+ + N K R MMVWQP NNKMFET SFLPPL+ ++I+KQVDY++ N+WTPC
Sbjct: 27 MSKGGFARTSAVN--KNRDMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILANSWTPC 84
Query: 358 LEFSEPEFAYVQAVNTNHIR-GTCFANYQDNRYW 456
LEF+ + AY A N N IR G + YQDNRYW
Sbjct: 85 LEFAASDQAY--AGNENCIRMGPVASTYQDNRYW 116