BLASTX nr result

ID: Phellodendron21_contig00043946 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Phellodendron21_contig00043946
         (433 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_011025868.1 PREDICTED: 54S ribosomal protein L12, mitochondri...    41   2e-06
XP_002310275.2 hypothetical protein POPTR_0007s13440g [Populus t...    41   2e-06
OAY57459.1 hypothetical protein MANES_02G098500 [Manihot esculenta]    41   4e-06

>XP_011025868.1 PREDICTED: 54S ribosomal protein L12, mitochondrial [Populus
           euphratica] XP_011025869.1 PREDICTED: 54S ribosomal
           protein L12, mitochondrial [Populus euphratica]
          Length = 192

 Score = 40.8 bits (94), Expect(2) = 2e-06
 Identities = 20/33 (60%), Positives = 25/33 (75%)
 Frame = +3

Query: 246 FTGLGLKESKELVEKAPSLMKK*VIKTRLRGIL 344
           FT LGLKE+K+LVEKAP+L+KK V K     I+
Sbjct: 147 FTDLGLKEAKDLVEKAPTLLKKGVTKDEAEKII 179



 Score = 37.7 bits (86), Expect(2) = 2e-06
 Identities = 23/48 (47%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +2

Query: 71  PSMFLMMPVMGF*MXXXXXXXXXXXXXX---EVKVEKTVFDLKLEGYD 205
           P M +MMP MGF M                 E KVEKTVFD+KLEG+D
Sbjct: 86  PVMAVMMPGMGFSMGAGMKGGGGGGAAAAKAEEKVEKTVFDVKLEGFD 133


>XP_002310275.2 hypothetical protein POPTR_0007s13440g [Populus trichocarpa]
           EEE90725.2 hypothetical protein POPTR_0007s13440g
           [Populus trichocarpa]
          Length = 192

 Score = 40.8 bits (94), Expect(2) = 2e-06
 Identities = 20/33 (60%), Positives = 25/33 (75%)
 Frame = +3

Query: 246 FTGLGLKESKELVEKAPSLMKK*VIKTRLRGIL 344
           FT LGLKE+K+LVEKAP+L+KK V K     I+
Sbjct: 147 FTDLGLKEAKDLVEKAPTLLKKGVTKDEAEKII 179



 Score = 37.7 bits (86), Expect(2) = 2e-06
 Identities = 23/48 (47%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +2

Query: 71  PSMFLMMPVMGF*MXXXXXXXXXXXXXX---EVKVEKTVFDLKLEGYD 205
           P M +MMP MGF M                 E KVEKTVFD+KLEG+D
Sbjct: 86  PVMAVMMPGMGFSMGAGMKGGGGGGAAAAKAEEKVEKTVFDVKLEGFD 133


>OAY57459.1 hypothetical protein MANES_02G098500 [Manihot esculenta]
          Length = 188

 Score = 40.8 bits (94), Expect(2) = 4e-06
 Identities = 20/33 (60%), Positives = 25/33 (75%)
 Frame = +3

Query: 246 FTGLGLKESKELVEKAPSLMKK*VIKTRLRGIL 344
           FT LGLKE+K+LVEKAP+L+KK V K     I+
Sbjct: 143 FTDLGLKEAKDLVEKAPTLLKKGVTKEEAEKIM 175



 Score = 37.0 bits (84), Expect(2) = 4e-06
 Identities = 22/46 (47%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = +2

Query: 71  PSMFLMMPVMGF*-MXXXXXXXXXXXXXXEVKVEKTVFDLKLEGYD 205
           P M +MMP MGF  +              E KVEKTVFD+KLEG+D
Sbjct: 84  PVMAVMMPGMGFSGVKGVAKGGAGAAAKGEEKVEKTVFDVKLEGFD 129


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